View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0668_high_4 (Length: 357)
Name: NF0668_high_4
Description: NF0668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0668_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 99 - 346
Target Start/End: Complemental strand, 8220524 - 8220277
Alignment:
| Q |
99 |
tcaatttcaatagtggaatgtgaatcctttgacatatagtataagtgtgagtcaaattctatgcacaactagtataaatcatatcaatatattggtcccc |
198 |
Q |
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| T |
8220524 |
tcaatttcaatagtggaatgtgaatcctttgacatatagtataagtgtgggtcaaattctatgcacgactagtataaatcatatcaatatattggtcccc |
8220425 |
T |
|
| Q |
199 |
accatgagactaaatagttaaatttttacagactatactaattggccattgttacctgtgctttcagtaccagaaaaacataggatttataacattaaca |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8220424 |
accatgagactaaatagttaaatttttacagactatactaattggccattgttacctgtgctttcagtaccagaaaaacataggatttataacattaaca |
8220325 |
T |
|
| Q |
299 |
tgcatatctgaacaaagatgagattgagcatacaaatggtccgttcat |
346 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8220324 |
tgcatatctgaacaaagatgagattgagcatacaaatggtccgttcat |
8220277 |
T |
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