View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0668_low_25 (Length: 328)

Name: NF0668_low_25
Description: NF0668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0668_low_25
NF0668_low_25
[»] chr3 (70 HSPs)
chr3 (158-328)||(16751630-16751800)
chr3 (163-321)||(17318132-17318292)
chr3 (160-321)||(30064798-30064961)
chr3 (160-328)||(7108647-7108816)
chr3 (160-328)||(7112582-7112751)
chr3 (160-328)||(22320615-22320784)
chr3 (160-328)||(22335670-22335839)
chr3 (160-328)||(28948793-28948962)
chr3 (160-328)||(4108228-4108397)
chr3 (160-328)||(4112080-4112249)
chr3 (160-328)||(11069099-11069268)
chr3 (160-328)||(11166517-11166686)
chr3 (160-328)||(15616586-15616755)
chr3 (160-328)||(55021936-55022105)
chr3 (160-328)||(14498356-14498525)
chr3 (186-328)||(27411066-27411208)
chr3 (158-328)||(19774379-19774534)
chr3 (186-328)||(15963913-15964056)
chr3 (186-328)||(15971761-15971904)
chr3 (186-328)||(15967837-15967980)
chr3 (200-305)||(14159826-14159933)
chr3 (160-225)||(15963857-15963922)
chr3 (160-225)||(15967781-15967846)
chr3 (160-225)||(15971705-15971770)
chr3 (231-291)||(14067598-14067658)
chr3 (229-290)||(31097889-31097950)
chr3 (229-290)||(7574705-7574766)
chr3 (229-290)||(1983181-1983242)
chr3 (229-290)||(7793697-7793757)
chr3 (229-290)||(15482372-15482433)
chr3 (281-321)||(8490068-8490108)
chr3 (281-321)||(8490175-8490215)
chr3 (281-321)||(11301306-11301346)
chr3 (281-321)||(14664794-14664834)
chr3 (281-321)||(14667958-14667998)
chr3 (229-292)||(2898173-2898236)
chr3 (278-321)||(11853911-11853954)
chr3 (282-321)||(37440533-37440572)
chr3 (229-290)||(327512-327572)
chr3 (209-286)||(3833360-3833439)
chr3 (229-290)||(20461847-20461907)
chr3 (281-321)||(5220147-5220187)
chr3 (237-290)||(3403327-3403380)
chr3 (229-290)||(11557756-11557817)
chr3 (209-286)||(38814070-38814149)
chr3 (169-208)||(855751-855790)
chr3 (169-208)||(16369070-16369109)
chr3 (169-204)||(16909543-16909578)
chr3 (207-290)||(322237-322322)
chr3 (276-310)||(4589991-4590025)
chr3 (191-290)||(11298925-11299025)
chr3 (281-319)||(14670231-14670268)
chr3 (281-319)||(14681753-14681790)
chr3 (207-290)||(19726289-19726374)
chr3 (288-321)||(4589837-4589870)
chr3 (191-285)||(12172430-12172526)
chr3 (12-41)||(16751916-16751945)
chr3 (13-41)||(3802006-3802034)
chr3 (13-41)||(9532294-9532322)
chr3 (13-41)||(10834956-10834984)
chr3 (13-41)||(11912463-11912491)
chr3 (13-41)||(12304210-12304238)
chr3 (13-41)||(12853378-12853406)
chr3 (13-41)||(14670062-14670090)
chr3 (13-41)||(14764810-14764838)
chr3 (13-41)||(16795539-16795567)
chr3 (13-41)||(18899489-18899517)
chr3 (13-41)||(20249864-20249892)
chr3 (13-41)||(29545953-29545981)
chr3 (13-41)||(54519633-54519661)
[»] chr7 (56 HSPs)
chr7 (158-328)||(18424416-18424587)
chr7 (160-328)||(32057-32226)
chr7 (160-328)||(12705656-12705825)
chr7 (160-328)||(12713872-12714041)
chr7 (160-328)||(18278391-18278560)
chr7 (160-328)||(18282354-18282523)
chr7 (160-328)||(12717696-12717865)
chr7 (160-328)||(12722607-12722776)
chr7 (160-328)||(71796-71980)
chr7 (160-328)||(75905-76089)
chr7 (186-328)||(45171020-45171163)
chr7 (160-225)||(45171154-45171219)
chr7 (169-225)||(16582849-16582905)
chr7 (229-290)||(12317834-12317895)
chr7 (231-290)||(15605609-15605668)
chr7 (209-290)||(2759785-2759868)
chr7 (281-321)||(2833122-2833162)
chr7 (229-289)||(9446531-9446591)
chr7 (282-321)||(15083413-15083452)
chr7 (282-321)||(39721383-39721422)
chr7 (229-287)||(9593056-9593113)
chr7 (209-286)||(13148841-13148920)
chr7 (229-290)||(42203681-42203742)
chr7 (281-321)||(2531005-2531045)
chr7 (169-204)||(9752124-9752159)
chr7 (207-290)||(14429529-14429614)
chr7 (229-286)||(13635803-13635860)
chr7 (229-290)||(14152340-14152400)
chr7 (281-321)||(7519962-7520002)
chr7 (171-211)||(9702936-9702976)
chr7 (171-211)||(32216952-32216992)
chr7 (169-208)||(17138527-17138566)
chr7 (229-287)||(20692-20749)
chr7 (12-41)||(18424270-18424299)
chr7 (12-41)||(23666467-23666496)
chr7 (281-310)||(25928154-25928183)
chr7 (288-321)||(26291441-26291474)
chr7 (13-41)||(146536-146564)
chr7 (13-41)||(838148-838176)
chr7 (13-41)||(1203328-1203356)
chr7 (13-41)||(7520230-7520258)
chr7 (13-41)||(10607335-10607363)
chr7 (13-41)||(11660318-11660346)
chr7 (171-211)||(11858195-11858235)
chr7 (13-41)||(13891666-13891694)
chr7 (13-41)||(13892049-13892077)
chr7 (13-41)||(14420823-14420851)
chr7 (13-41)||(16005040-16005068)
chr7 (13-41)||(16109990-16110018)
chr7 (13-41)||(18606374-18606402)
chr7 (13-41)||(18871333-18871361)
chr7 (171-211)||(19649951-19649991)
chr7 (13-41)||(20486778-20486806)
chr7 (171-211)||(24054080-24054120)
chr7 (13-41)||(39268328-39268356)
chr7 (13-41)||(39721232-39721260)
[»] chr6 (45 HSPs)
chr6 (158-328)||(16622970-16623140)
chr6 (160-328)||(16759185-16759354)
chr6 (160-328)||(11565810-11565979)
chr6 (160-328)||(12619831-12620000)
chr6 (160-328)||(23988908-23989077)
chr6 (160-328)||(22948065-22948234)
chr6 (160-328)||(22952021-22952190)
chr6 (160-328)||(23870509-23870678)
chr6 (160-328)||(23874465-23874634)
chr6 (160-328)||(8242822-8242991)
chr6 (201-328)||(31479205-31479332)
chr6 (160-328)||(23394001-23394185)
chr6 (160-328)||(23413909-23414093)
chr6 (186-328)||(19869603-19869746)
chr6 (234-326)||(14471317-14471409)
chr6 (160-225)||(19869547-19869612)
chr6 (229-290)||(27567981-27568042)
chr6 (281-321)||(22075026-22075066)
chr6 (158-198)||(31479320-31479360)
chr6 (229-287)||(19298105-19298162)
chr6 (229-287)||(12706398-12706455)
chr6 (207-290)||(16523770-16523855)
chr6 (229-287)||(16740916-16740974)
chr6 (229-290)||(17803896-17803956)
chr6 (288-321)||(23400974-23401007)
chr6 (229-290)||(27553942-27554003)
chr6 (288-328)||(18918363-18918403)
chr6 (281-321)||(22074919-22074958)
chr6 (169-208)||(21740434-21740473)
chr6 (281-328)||(22862017-22862063)
chr6 (229-287)||(21701996-21702053)
chr6 (281-310)||(1643471-1643500)
chr6 (288-321)||(1643619-1643652)
chr6 (281-310)||(2076519-2076548)
chr6 (281-310)||(2076635-2076664)
chr6 (209-286)||(9482632-9482711)
chr6 (281-310)||(23400889-23400918)
chr6 (241-290)||(25767477-25767526)
chr6 (13-41)||(1254195-1254223)
chr6 (13-41)||(12941257-12941285)
chr6 (171-211)||(19862593-19862633)
chr6 (171-211)||(19872735-19872775)
chr6 (13-41)||(23400714-23400742)
chr6 (13-41)||(23538017-23538045)
chr6 (13-41)||(27222868-27222896)
[»] chr1 (31 HSPs)
chr1 (158-328)||(39244941-39245111)
chr1 (158-328)||(39248496-39248666)
chr1 (158-328)||(41389389-41389559)
chr1 (160-328)||(1009671-1009840)
chr1 (160-328)||(1926142-1926311)
chr1 (160-328)||(20925156-20925325)
chr1 (160-328)||(16376393-16376562)
chr1 (160-328)||(52634757-52634911)
chr1 (192-328)||(33796553-33796694)
chr1 (160-225)||(33796491-33796556)
chr1 (229-290)||(3705436-3705497)
chr1 (229-290)||(36819644-36819705)
chr1 (229-290)||(18394334-18394395)
chr1 (229-290)||(21172711-21172771)
chr1 (229-290)||(21312827-21312887)
chr1 (169-208)||(22831790-22831829)
chr1 (294-328)||(41389276-41389310)
chr1 (191-260)||(3473339-3473409)
chr1 (209-261)||(46975176-46975231)
chr1 (207-290)||(18182512-18182597)
chr1 (281-319)||(41801043-41801080)
chr1 (288-321)||(20229895-20229928)
chr1 (281-310)||(21406469-21406498)
chr1 (12-41)||(39245185-39245214)
chr1 (12-41)||(39248740-39248769)
chr1 (12-41)||(41389679-41389708)
chr1 (171-208)||(42865679-42865716)
chr1 (13-41)||(16370961-16370989)
chr1 (13-41)||(22132113-22132141)
chr1 (171-211)||(22469164-22469204)
chr1 (13-41)||(41801293-41801321)
[»] chr4 (55 HSPs)
chr4 (158-321)||(15223727-15223891)
chr4 (160-328)||(9555478-9555647)
chr4 (160-328)||(14758415-14758584)
chr4 (160-328)||(14955180-14955349)
chr4 (160-328)||(33741248-33741417)
chr4 (160-328)||(5757799-5757968)
chr4 (160-328)||(4562274-4562443)
chr4 (160-328)||(25688851-25689020)
chr4 (186-328)||(12486659-12486802)
chr4 (160-225)||(12486603-12486668)
chr4 (171-225)||(13813683-13813737)
chr4 (164-225)||(13818195-13818256)
chr4 (229-290)||(15353677-15353738)
chr4 (281-321)||(20158227-20158267)
chr4 (281-321)||(20160903-20160943)
chr4 (281-321)||(20163681-20163721)
chr4 (282-321)||(10712012-10712051)
chr4 (282-321)||(10925782-10925821)
chr4 (229-287)||(1952099-1952156)
chr4 (229-290)||(11250930-11250991)
chr4 (229-290)||(36134286-36134346)
chr4 (191-287)||(15093394-15093492)
chr4 (209-286)||(2014465-2014544)
chr4 (209-286)||(16243740-16243819)
chr4 (229-290)||(18603067-18603127)
chr4 (171-204)||(22634750-22634783)
chr4 (171-211)||(13569175-13569215)
chr4 (281-321)||(20158120-20158159)
chr4 (281-321)||(20163574-20163613)
chr4 (229-287)||(3412507-3412564)
chr4 (186-241)||(13818162-13818219)
chr4 (169-211)||(15125504-15125546)
chr4 (229-287)||(17152823-17152880)
chr4 (229-287)||(18222717-18222774)
chr4 (229-287)||(18609642-18609699)
chr4 (192-225)||(13813639-13813672)
chr4 (12-41)||(15223581-15223610)
chr4 (230-287)||(18236603-18236659)
chr4 (209-286)||(19757940-19758019)
chr4 (209-286)||(19781787-19781866)
chr4 (163-204)||(23996574-23996615)
chr4 (288-321)||(27533008-27533041)
chr4 (13-41)||(631762-631790)
chr4 (13-41)||(13813847-13813875)
chr4 (13-41)||(13818335-13818363)
chr4 (13-41)||(15533255-15533283)
chr4 (13-41)||(17052460-17052488)
chr4 (13-41)||(18211640-18211668)
chr4 (281-321)||(20160796-20160835)
chr4 (13-41)||(22634941-22634969)
chr4 (13-41)||(23996981-23997009)
chr4 (13-41)||(24048399-24048427)
chr4 (13-41)||(30145819-30145847)
chr4 (13-41)||(36036988-36037016)
chr4 (13-41)||(49549097-49549125)
[»] chr5 (54 HSPs)
chr5 (160-328)||(18355222-18355392)
chr5 (172-328)||(40724524-40724682)
chr5 (160-328)||(19473673-19473842)
chr5 (160-328)||(20294849-20295018)
chr5 (201-328)||(10752026-10752153)
chr5 (160-289)||(11219915-11220045)
chr5 (160-289)||(11224501-11224631)
chr5 (160-289)||(11230313-11230443)
chr5 (166-289)||(11228330-11228454)
chr5 (191-290)||(23439625-23439726)
chr5 (191-290)||(23450992-23451093)
chr5 (191-290)||(23458236-23458337)
chr5 (191-290)||(23462497-23462598)
chr5 (277-321)||(20911865-20911909)
chr5 (281-328)||(15237930-15237977)
chr5 (190-235)||(11226495-11226540)
chr5 (158-198)||(10751998-10752038)
chr5 (235-290)||(24221568-24221623)
chr5 (191-290)||(1859351-1859452)
chr5 (229-290)||(17919525-17919587)
chr5 (229-290)||(17410179-17410239)
chr5 (209-286)||(33408914-33408993)
chr5 (294-328)||(15237817-15237851)
chr5 (229-287)||(18773913-18773970)
chr5 (229-287)||(18783756-18783813)
chr5 (229-287)||(23535904-23535962)
chr5 (229-287)||(26743084-26743141)
chr5 (160-225)||(11226481-11226545)
chr5 (281-321)||(24768193-24768232)
chr5 (229-290)||(123685-123747)
chr5 (229-287)||(17730747-17730804)
chr5 (169-207)||(18770395-18770433)
chr5 (191-225)||(20766628-20766662)
chr5 (207-290)||(21367052-21367137)
chr5 (229-287)||(42805130-42805187)
chr5 (12-41)||(9774975-9775004)
chr5 (12-41)||(10751852-10751881)
chr5 (12-41)||(15238132-15238161)
chr5 (12-41)||(22108464-22108493)
chr5 (281-310)||(40727230-40727259)
chr5 (230-286)||(16673863-16673918)
chr5 (13-41)||(19510498-19510526)
chr5 (171-211)||(21276016-21276056)
chr5 (171-211)||(21886903-21886943)
chr5 (13-41)||(22120606-22120634)
chr5 (13-41)||(22339048-22339076)
chr5 (13-41)||(23113417-23113445)
chr5 (171-211)||(23200973-23201013)
chr5 (171-211)||(23501773-23501813)
chr5 (171-211)||(26703691-26703731)
chr5 (171-211)||(26973424-26973464)
chr5 (13-41)||(28372096-28372124)
chr5 (13-41)||(37600023-37600051)
chr5 (13-41)||(38146433-38146461)
[»] scaffold0525 (1 HSPs)
scaffold0525 (160-328)||(4847-5016)
[»] chr8 (29 HSPs)
chr8 (160-328)||(21977621-21977790)
chr8 (160-328)||(21973530-21973699)
chr8 (160-328)||(22110999-22111168)
chr8 (160-328)||(43250759-43250928)
chr8 (160-328)||(21828965-21829149)
chr8 (160-328)||(30941099-30941283)
chr8 (186-328)||(18863624-18863767)
chr8 (160-225)||(18863758-18863823)
chr8 (229-290)||(20856811-20856872)
chr8 (281-321)||(14398799-14398839)
chr8 (281-321)||(21386515-21386555)
chr8 (282-321)||(21410088-21410127)
chr8 (282-321)||(21804580-21804619)
chr8 (229-287)||(16231813-16231870)
chr8 (229-287)||(22044594-22044651)
chr8 (209-286)||(23847355-23847434)
chr8 (191-260)||(16184339-16184410)
chr8 (281-321)||(21386407-21386447)
chr8 (229-287)||(23833882-23833939)
chr8 (169-204)||(19259961-19259996)
chr8 (169-208)||(20466450-20466489)
chr8 (288-321)||(15924251-15924284)
chr8 (170-211)||(21169188-21169229)
chr8 (171-211)||(19898701-19898741)
chr8 (171-211)||(21162523-21162563)
chr8 (13-41)||(21328602-21328630)
chr8 (171-211)||(23777298-23777338)
chr8 (13-41)||(27942700-27942728)
chr8 (13-41)||(44385848-44385876)
[»] chr2 (33 HSPs)
chr2 (160-328)||(10102797-10102966)
chr2 (160-328)||(24629468-24629637)
chr2 (160-328)||(24648303-24648472)
chr2 (160-328)||(27380341-27380510)
chr2 (160-328)||(27384387-27384556)
chr2 (160-328)||(30346004-30346173)
chr2 (160-328)||(27600780-27600949)
chr2 (160-328)||(1282384-1282568)
chr2 (186-328)||(41531962-41532105)
chr2 (160-225)||(41532096-41532161)
chr2 (229-290)||(24174485-24174546)
chr2 (186-290)||(22812291-22812397)
chr2 (281-328)||(31344279-31344326)
chr2 (225-287)||(19928841-19928902)
chr2 (229-290)||(25961903-25961965)
chr2 (191-290)||(25964102-25964203)
chr2 (229-290)||(19691982-19692042)
chr2 (229-289)||(24735102-24735161)
chr2 (229-290)||(24655708-24655770)
chr2 (207-290)||(37524329-37524414)
chr2 (169-211)||(40622673-40622715)
chr2 (235-290)||(24869571-24869626)
chr2 (281-319)||(9784216-9784253)
chr2 (191-225)||(22812373-22812407)
chr2 (191-290)||(24673185-24673286)
chr2 (191-290)||(24679810-24679911)
chr2 (13-41)||(6481820-6481848)
chr2 (13-41)||(6485287-6485315)
chr2 (13-41)||(9240710-9240738)
chr2 (13-41)||(19663572-19663600)
chr2 (13-41)||(20260293-20260321)
chr2 (13-41)||(21074522-21074550)
chr2 (191-260)||(23020133-23020204)
[»] scaffold0061 (1 HSPs)
scaffold0061 (160-328)||(68169-68338)
[»] scaffold0372 (1 HSPs)
scaffold0372 (160-328)||(6008-6177)
[»] scaffold0141 (1 HSPs)
scaffold0141 (160-328)||(15109-15293)
[»] scaffold0029 (3 HSPs)
scaffold0029 (160-321)||(79523-79683)
scaffold0029 (277-310)||(62675-62708)
scaffold0029 (281-310)||(66591-66620)
[»] scaffold0157 (2 HSPs)
scaffold0157 (186-328)||(33675-33818)
scaffold0157 (160-225)||(33809-33874)
[»] scaffold0349 (1 HSPs)
scaffold0349 (160-328)||(11465-11619)
[»] scaffold1220 (1 HSPs)
scaffold1220 (207-290)||(1452-1537)
[»] scaffold0044 (2 HSPs)
scaffold0044 (229-290)||(18897-18958)
scaffold0044 (235-290)||(12619-12674)
[»] scaffold0015 (1 HSPs)
scaffold0015 (229-290)||(195296-195357)
[»] scaffold0001 (4 HSPs)
scaffold0001 (229-290)||(173003-173064)
scaffold0001 (171-211)||(204498-204538)
scaffold0001 (207-261)||(422920-422977)
scaffold0001 (229-261)||(178706-178738)
[»] scaffold0003 (2 HSPs)
scaffold0003 (207-290)||(414419-414505)
scaffold0003 (229-287)||(100782-100839)
[»] scaffold0550 (1 HSPs)
scaffold0550 (207-286)||(7136-7217)
[»] scaffold0120 (1 HSPs)
scaffold0120 (229-290)||(20347-20408)
[»] scaffold0009 (1 HSPs)
scaffold0009 (229-290)||(228705-228766)
[»] scaffold1852 (1 HSPs)
scaffold1852 (281-321)||(537-577)
[»] scaffold0486 (1 HSPs)
scaffold0486 (281-321)||(8944-8984)
[»] scaffold0023 (2 HSPs)
scaffold0023 (281-321)||(11996-12036)
scaffold0023 (281-321)||(12104-12143)
[»] scaffold0008 (1 HSPs)
scaffold0008 (194-290)||(34223-34322)
[»] scaffold0476 (2 HSPs)
scaffold0476 (191-290)||(5222-5323)
scaffold0476 (191-290)||(6417-6518)
[»] scaffold0124 (2 HSPs)
scaffold0124 (191-290)||(42265-42366)
scaffold0124 (13-41)||(25582-25610)
[»] scaffold0093 (1 HSPs)
scaffold0093 (191-290)||(5203-5304)
[»] scaffold0439 (1 HSPs)
scaffold0439 (229-290)||(10666-10726)
[»] scaffold0228 (1 HSPs)
scaffold0228 (229-290)||(18968-19029)
[»] scaffold0193 (1 HSPs)
scaffold0193 (209-286)||(9107-9186)
[»] scaffold0184 (1 HSPs)
scaffold0184 (229-290)||(4572-4633)
[»] scaffold0036 (1 HSPs)
scaffold0036 (229-290)||(66762-66822)
[»] scaffold0031 (4 HSPs)
scaffold0031 (229-290)||(53264-53324)
scaffold0031 (281-319)||(37014-37051)
scaffold0031 (13-41)||(37217-37245)
scaffold0031 (171-211)||(66259-66299)
[»] scaffold0342 (1 HSPs)
scaffold0342 (229-290)||(7653-7715)
[»] scaffold0111 (1 HSPs)
scaffold0111 (169-211)||(32059-32101)
[»] scaffold0035 (1 HSPs)
scaffold0035 (191-290)||(47123-47224)
[»] scaffold0013 (3 HSPs)
scaffold0013 (229-287)||(81563-81620)
scaffold0013 (234-290)||(3007-3062)
scaffold0013 (13-41)||(74346-74374)
[»] scaffold0010 (1 HSPs)
scaffold0010 (229-287)||(22926-22983)
[»] scaffold1873 (2 HSPs)
scaffold1873 (164-201)||(848-885)
scaffold1873 (245-290)||(954-999)
[»] scaffold0166 (1 HSPs)
scaffold0166 (281-321)||(10690-10729)
[»] scaffold0081 (3 HSPs)
scaffold0081 (171-211)||(23298-23338)
scaffold0081 (171-211)||(38722-38762)
scaffold0081 (181-211)||(14287-14317)
[»] scaffold1296 (1 HSPs)
scaffold1296 (194-290)||(29-127)
[»] scaffold0819 (1 HSPs)
scaffold0819 (169-204)||(1793-1828)
[»] scaffold0673 (1 HSPs)
scaffold0673 (191-290)||(8199-8294)
[»] scaffold0210 (4 HSPs)
scaffold0210 (169-208)||(22303-22342)
scaffold0210 (169-208)||(30195-30234)
scaffold0210 (176-208)||(22271-22303)
scaffold0210 (176-208)||(30163-30195)
[»] scaffold0109 (2 HSPs)
scaffold0109 (286-321)||(36953-36988)
scaffold0109 (230-287)||(6672-6728)
[»] scaffold0080 (2 HSPs)
scaffold0080 (169-208)||(19114-19153)
scaffold0080 (169-208)||(55850-55889)
[»] scaffold1552 (1 HSPs)
scaffold1552 (229-287)||(77-134)
[»] scaffold0575 (2 HSPs)
scaffold0575 (281-319)||(6794-6831)
scaffold0575 (13-41)||(6975-7003)
[»] scaffold0574 (1 HSPs)
scaffold0574 (181-211)||(8278-8308)
[»] scaffold0311 (1 HSPs)
scaffold0311 (207-290)||(7524-7609)
[»] scaffold0181 (1 HSPs)
scaffold0181 (229-290)||(27505-27567)
[»] scaffold0546 (1 HSPs)
scaffold0546 (230-287)||(6579-6635)
[»] scaffold0410 (1 HSPs)
scaffold0410 (229-290)||(1857-1917)
[»] scaffold0327 (1 HSPs)
scaffold0327 (281-310)||(19291-19320)
[»] scaffold0293 (2 HSPs)
scaffold0293 (281-310)||(21122-21151)
scaffold0293 (13-41)||(21354-21382)
[»] scaffold0004 (1 HSPs)
scaffold0004 (171-208)||(69409-69446)
[»] scaffold1427 (1 HSPs)
scaffold1427 (13-41)||(236-264)
[»] scaffold0842 (1 HSPs)
scaffold0842 (13-41)||(5278-5306)
[»] scaffold0599 (1 HSPs)
scaffold0599 (13-41)||(4157-4185)
[»] scaffold0337 (1 HSPs)
scaffold0337 (13-41)||(10836-10864)
[»] scaffold0216 (1 HSPs)
scaffold0216 (207-288)||(17507-17590)
[»] scaffold0149 (2 HSPs)
scaffold0149 (171-211)||(3356-3396)
scaffold0149 (171-211)||(7787-7827)
[»] scaffold0043 (1 HSPs)
scaffold0043 (171-211)||(17851-17891)
[»] scaffold0026 (1 HSPs)
scaffold0026 (13-41)||(109637-109665)
[»] scaffold0020 (1 HSPs)
scaffold0020 (171-211)||(178515-178555)
[»] scaffold0012 (1 HSPs)
scaffold0012 (13-41)||(224157-224185)


Alignment Details
Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 158 - 328
Target Start/End: Complemental strand, 16751800 - 16751630
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16751800 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacatagtcatcttaaacaatagcatctttgataaacaattaccaagtaat 16751701  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16751700 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 16751630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 163 - 321
Target Start/End: Complemental strand, 17318292 - 17318132
Alignment:
Q  163 taacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 260  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  17318292 taacaccataatcaacatcataaaacttcaacataaacatcttaaacataatcatcttaaacatcatagcatctttgataaacaattatcaagtaatcac 17318193  T
Q  261 aacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatat 321  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17318192 aactttcgatcatcatcaataacataacataatattcacttaataataattaatcatatat 17318132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 160 - 321
Target Start/End: Original strand, 30064798 - 30064961
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  30064798 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 30064897  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatat 321  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30064898 cacaacattcgatcatcatcaataacataacataatattcacttaataataattaatcctatat 30064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 7108647 - 7108816
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  7108647 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 7108746  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  7108747 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 7108816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 7112582 - 7112751
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  7112582 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 7112681  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  7112682 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 7112751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 22320615 - 22320784
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  22320615 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 22320714  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  22320715 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 22320784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 22335670 - 22335839
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  22335670 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 22335769  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  22335770 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 22335839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 28948793 - 28948962
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  28948793 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 28948892  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  28948893 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 28948962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 4108397 - 4108228
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  4108397 tactaacaccaaagtcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 4108298  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  4108297 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 4108228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 4112249 - 4112080
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  4112249 tactaacaccaaagtcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 4112150  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  4112149 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 4112080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 11069099 - 11069268
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  11069099 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 11069198  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||    
T  11069199 cacaacattcgatcatcatcaataacataatataatattcatttaataat-attaatcatatatagaacaa 11069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 11166686 - 11166517
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  11166686 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 11166587  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  11166586 cacaacattcgatcatcatcaataacataacataatattcatttaataat-attaatcatatatagaacaa 11166517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 15616586 - 15616755
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  15616586 tactaacaccaaaattaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 15616685  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  15616686 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 15616755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 55021936 - 55022105
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  55021936 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 55022035  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  55022036 cacaacattcgatcatcatcaataacataacataatattcatttaataat-attaatcatatatagaacaa 55022105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 14498356 - 14498525
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |  ||||||||||||||||||||||||||||||||    
T  14498356 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaatatcatagcatctttgataaacaattaccaagtaat 14498455  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  14498456 cacaacattcgatcatcatcaataacataacataatattcacttaacaat-attaatcatatatagaacaa 14498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 27411208 - 27411066
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacat 285  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27411208 atcttcaacatatacatcttaaacataatcatcttaaacaataacatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacat 27411109  T
Q  286 aacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  27411108 aacataatatttacttaataataatttatcatatatggaacaa 27411066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 158 - 328
Target Start/End: Original strand, 19774379 - 19774534
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||               |||||||||||||||||||||||| ||||||||||||||    
T  19774379 cgtactaacaccataatcaacatcataaatcttcaacataaacatc---------------ttaaacaatagcatctttgataaaaaattaccaagtaat 19774463  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19774464 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 19774534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 15963913 - 15964056
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||| ||||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15963913 atcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataac 15964012  T
Q  284 ataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  15964013 ataacataatattcacttaataat-attaatcatatatagaacaa 15964056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 15971761 - 15971904
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||| ||||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15971761 atcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataac 15971860  T
Q  284 ataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  15971861 ataacataatattcacttaataat-attaatcatatatagaacaa 15971904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 15967837 - 15967980
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||| ||||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15967837 atcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataac 15967936  T
Q  284 ataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||    
T  15967937 ataacataatattcacttaataat-attagtcatatatagaacaa 15967980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 200 - 305
Target Start/End: Complemental strand, 14159933 - 14159826
Alignment:
Q  200 catcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattc 297  Q
    |||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14159933 catcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacataatattc 14159834  T
Q  298 acttaata 305  Q
    ||||||||    
T  14159833 acttaata 14159826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 15963857 - 15963922
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15963857 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 15963922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 15967781 - 15967846
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15967781 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 15967846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 15971705 - 15971770
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15971705 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 15971770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 14067658 - 14067598
Alignment:
Q  231 atctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacata 291  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14067658 atctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacata 14067598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 31097950 - 31097889
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  31097950 gcatctttgataaacaattaccaagtaatcacaacattcaatcatcatcaataacataacat 31097889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 7574705 - 7574766
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  7574705 gcatctttgataaacaattatcaagtaatcacagctttcaatcatcatcaataacataacat 7574766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 1983242 - 1983181
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||| ||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  1983242 gcatctttgataaataattatcaagtaatcacatcattcaatcatcatcaataacataacat 1983181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 7793757 - 7793697
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  7793757 gcatctttgataa-caattatcaagtaatcacaacattcaatcatcatcaataacataacat 7793697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 15482372 - 15482433
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||| ||| |||||||||||| | ||| ||||||||||||||||||||||    
T  15482372 gcatctttgataaacagttatcaagtaatcacagcattcaatcatcatcaataacataacat 15482433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 8490108 - 8490068
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8490108 aacataacataatattcacttaataataattaatcatatat 8490068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 8490215 - 8490175
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8490215 aacataacataatattcacttaataataattaatcatatat 8490175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 11301346 - 11301306
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11301346 aacataacataatattcacttaataataattaatcatatat 11301306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 14664794 - 14664834
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14664794 aacataacataatattcacttaataataattaatcatatat 14664834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 14667958 - 14667998
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14667958 aacataacataatattcacttaataataattaatcatatat 14667998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 2898236 - 2898173
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacataa 292  Q
    |||||||||||||||||||| |||||||||||| | ||| | ||||| ||||||||||||||||    
T  2898236 gcatctttgataaacaattatcaagtaatcacatcattcaaccatcaccaataacataacataa 2898173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 11853911 - 11853954
Alignment:
Q  278 aataacataacataatattcacttaataataattaatcatatat 321  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  11853911 aataatataacataatattcacttaataataattaatcatatat 11853954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 37440572 - 37440533
Alignment:
Q  282 acataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37440572 acataacataatattcacttaataataattaatcatatat 37440533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 327572 - 327512
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  327572 gcatctttgataa-caattaacaagtaatcacagcattcaatcatcatcaataacataacat 327512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 3833360 - 3833439
Alignment:
Q  209 cataatcat-cttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    ||||||||| |||||||||  |||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||    
T  3833360 cataatcattcttaaacaacatagcatctttgataaacaattatcaagtaatcacagc-ttcaatcataatcaataacata 3833439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 20461907 - 20461847
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  20461907 gcatctttgataa-caattatcaagtaatcacagcattcaatcatcatcaataacataacat 20461847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 5220147 - 5220187
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  5220147 aacataacataatattctcttaataataattaatcatatat 5220187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 3403380 - 3403327
Alignment:
Q  237 gataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||| |||||||||||| | ||| |||||||||||||||| |||||    
T  3403380 gataaacaattatcaagtaatcacatcattcaatcatcatcaataacaaaacat 3403327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 11557817 - 11557756
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||| |||||| ||| |||||||||||  | ||| ||||||||||||||||||||||    
T  11557817 gcatctttgttaaacagttatcaagtaatcacttcattcaatcatcatcaataacataacat 11557756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 38814070 - 38814149
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  ||||||||||||||| |||||| |||||||||||| | ||| ||||| ||||||||||||    
T  38814070 cataatcagtcttaaacaacatagcatctttgataaccaattatcaagtaatcacagc-ttcaatcataatcaataacata 38814149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 855751 - 855790
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  855751 cataattaacatcataaatcttcaacataagcatcttaaa 855790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 16369070 - 16369109
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  16369070 cataattaacatcataaatcttcaacataagcatcttaaa 16369109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 16909543 - 16909578
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatct 204  Q
    |||||| |||||||||||||||||||||||||||||    
T  16909543 cataattaacatcataaatcttcaacataaacatct 16909578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 322237 - 322322
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  || ||||||||||||| ||| |  |||||||||||  | ||| |||||||| |||||||||||||    
T  322237 aacataaacatcttaaacatcattgcatctttgataatcaaatgtcaagtaatcacttcattcaatcatcataaataacataacat 322322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 310
Target Start/End: Complemental strand, 4590025 - 4589991
Alignment:
Q  276 tcaataacataacataatattcacttaataataat 310  Q
    |||| ||||||||||||||||||||||||||||||    
T  4590025 tcaacaacataacataatattcacttaataataat 4589991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 11299025 - 11298925
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| || ||||||||||||||||  ||| |||||||||||| ||| || |||||| |||   | ||| ||||| || |||||||||||    
T  11299025 caacataaacatcttcaatataatcatcttaaacatcata-catctttgataatcaaatatcaagtactcatttctttcaatcataataaataacataac 11298927  T
Q  289 at 290  Q
    ||    
T  11298926 at 11298925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 14670231 - 14670268
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatat 319  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  14670231 aacataacataatattcacttaataataa-taatcatat 14670268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 14681753 - 14681790
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatat 319  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  14681753 aacataacataatattcacttaataataa-taatcatat 14681790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 19726374 - 19726289
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  |||||||| |||||||  || || |||||||||||  | ||| |||||||| |||||||||||||    
T  19726374 aacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaatcatcataaataacataacat 19726289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Complemental strand, 4589870 - 4589837
Alignment:
Q  288 cataatattcacttaataataattaatcatatat 321  Q
    ||||| ||||||||||||||||||||||||||||    
T  4589870 cataacattcacttaataataattaatcatatat 4589837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 285
Target Start/End: Original strand, 12172430 - 12172526
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacat 285  Q
    ||||||||||||||| ||||||| ||||||||| |  |||||||| |||||||  || ||  ||||||||||  | ||| |||||||| ||||||||    
T  12172430 caacataaacatcttcaacataagcatcttaaatatcatagcatcattgataataaaatattaagtaatcactccattcaatcatcataaataacat 12172526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 16751945 - 16751916
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  16751945 acatcatcaagtacatttaacaactcatag 16751916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 3802006 - 3802034
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  3802006 catcatcaagtacatttaacaactcatag 3802034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 9532294 - 9532322
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  9532294 catcatcaagtacatttaacaactcatag 9532322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 10834984 - 10834956
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  10834984 catcatcaagtacatttaacaactcatag 10834956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 11912463 - 11912491
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  11912463 catcatcaagtacatttaacaactcatag 11912491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 12304210 - 12304238
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  12304210 catcatcaagtacatttaacaactcatag 12304238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 12853406 - 12853378
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  12853406 catcatcaagtacatttaacaactcatag 12853378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 14670062 - 14670090
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  14670062 catcatcaagtacatttaacaactcatag 14670090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 14764838 - 14764810
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  14764838 catcatcaagtacatttaacaactcatag 14764810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 16795539 - 16795567
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  16795539 catcatcaagtacatttaacaactcatag 16795567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 18899489 - 18899517
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  18899489 catcatcaagtacatttaacaactcatag 18899517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 20249892 - 20249864
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  20249892 catcatcaagtacatttaacaactcatag 20249864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 29545981 - 29545953
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  29545981 catcatcaagtacatttaacaactcatag 29545953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 54519633 - 54519661
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  54519633 catcatcaagtacatttaacaactcatag 54519661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 1e-87; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 158 - 328
Target Start/End: Original strand, 18424416 - 18424587
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatcttt-gataaacaattaccaagtaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18424416 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatcttttgataaacaattaccaagtaa 18424515  T
Q  257 tcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18424516 tcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 18424587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 32057 - 32226
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  32057 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 32156  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  32157 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 32226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 12705825 - 12705656
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  12705825 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 12705726  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12705725 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 12705656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 12713872 - 12714041
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||| ||||    
T  12713872 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaaataat 12713971  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12713972 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 12714041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 18278391 - 18278560
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  18278391 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 18278490  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18278491 cacaaaattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 18278560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 18282354 - 18282523
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  18282354 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 18282453  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18282454 cacaaaattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 18282523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 12717696 - 12717865
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaa--tagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||| |||||||   |||||||||||||||||||||||||||||||    
T  12717696 tactaacaccaaaatcaacatcataaatcttcaacataaacatgttaaacaatatcattttaaacatcctagcatctttgataaacaattaccaagtaat 12717795  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  12717796 cacaacattcgatcatcatcaataacataacataatattcacttaacaat-attaatcatatatagaacaa 12717865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 12722607 - 12722776
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaa--tagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||| |||||||   |||||||||||||||||||||||||||||||    
T  12722607 tactaacaccaaaatcaacatcataaatcttcaacataaacatgttaaacaatatcattttaaacatcctagcatctttgataaacaattaccaagtaat 12722706  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  12722707 cacaacattcgatcatcatcaataacataacataatattcacttaacaat-attaatcatatatagaacaa 12722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 71980 - 71796
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaata-----------------gcatctttgataaa 242  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||    
T  71980 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaa 71881  T
Q  243 caattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  71880 caattaccaagtaatcacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 71796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 76089 - 75905
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaata-----------------gcatctttgataaa 242  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||    
T  76089 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaa 75990  T
Q  243 caattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  75989 caattaccaagtaatcacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 75905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 45171163 - 45171020
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||| ||||||| |||||||||||  ||||||||||| |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45171163 atcttaaacataatcatcttaaacaatatcatcttaaaaatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataac 45171064  T
Q  284 ataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  45171063 ataacataatattcacttaataat-attaatcatatatagaacaa 45171020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 45171219 - 45171154
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45171219 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 45171154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 16582849 - 16582905
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  16582849 cataatcaacatcttaaatcttaaacataaacatcttaaacataatcatcttaaaca 16582905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 12317834 - 12317895
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  12317834 gcatctttgataaacaattatcaagtaatcacagcattcaatcatcatcaataacataacat 12317895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 15605668 - 15605609
Alignment:
Q  231 atctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  15605668 atctttgataaacaattatcaagtaatcacagcattcaatcatcatcaataacataacat 15605609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 2759785 - 2759868
Alignment:
Q  209 cataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||| |||||||||||  || |||||||||||||||||||| |||||||||||  | ||| ||||||||||||| ||||||||    
T  2759785 cataaacatcttaaacatcattgcatctttgataaacaattatcaagtaatcacttcattcaatcatcatcaatatcataacat 2759868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 2833162 - 2833122
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2833162 aacataacataatattcacttaataataattaatcatatat 2833122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 9446591 - 9446531
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataaca 289  Q
    |||||||||||||||||||| |||||| ||||| | ||| |||||||||||||||||||||    
T  9446591 gcatctttgataaacaattaacaagtattcacatcattcaatcatcatcaataacataaca 9446531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 15083413 - 15083452
Alignment:
Q  282 acataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15083413 acataacataatattcacttaataataattaatcatatat 15083452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 39721383 - 39721422
Alignment:
Q  282 acataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39721383 acataacataatattcacttaataataattaatcatatat 39721422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 9593056 - 9593113
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||    
T  9593056 gcatctttgataaacaattatcaagtaatcacagc-ttcaatcatcatcaataacataa 9593113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 13148841 - 13148920
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  |||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||    
T  13148841 cataatcagtcttaaacaacatagcatctttgataaacaattatcaagtaatcacagc-ttcaatcataatcaataacata 13148920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 42203681 - 42203742
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||| ||||| | ||| ||| ||||||||||||||||||    
T  42203681 gcatctttgataaacaattaacaagtattcacatcattcaatcgtcatcaataacataacat 42203742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 2531045 - 2531005
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  2531045 aacataacataatattctcttaataataattaatcatatat 2531005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 204
Target Start/End: Complemental strand, 9752159 - 9752124
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatct 204  Q
    ||||||||||||||||||||||||||||||||||||    
T  9752159 cataatcaacatcataaatcttcaacataaacatct 9752124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 14429529 - 14429614
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  || ||||||||||||| ||| || |||||||||||  | ||| |||||||| |||||||||||||    
T  14429529 aacataaacatcttaaacatcattgcatctttgataatcaaatatcaagtaatcacttcattcaatcatcataaataacataacat 14429614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 13635860 - 13635803
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||||||||||| ||| ||| |||||||| | ||| ||||||||||||||||||    
T  13635860 gcatctttgataaacagttatcaattaatcacagcattcaatcatcatcaataacata 13635803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 14152400 - 14152340
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||| | ||| |||||||| |||||||||||||    
T  14152400 gcatctttgataa-caattatcaagtaatcacagcattcaatcatcattaataacataacat 14152340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 7520002 - 7519962
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  7520002 aacataacataatattcccttaatattaattaatcatatat 7519962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 9702936 - 9702976
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  9702936 taattaacaacataaatcttcaacataaacatcttaaacat 9702976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 32216992 - 32216952
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  32216992 taattaacaacataaatcttcaacataaacatcttaaacat 32216952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 17138566 - 17138527
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  17138566 cataattaacatcataaatcttcaacataagcatcttaaa 17138527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 20749 - 20692
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||| ||||||||||    
T  20749 gcatctttgataaacaattatcacataatcacaac-ttcaatcatcataaataacataa 20692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 18424270 - 18424299
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  18424270 acatcatcaagtacatttaacaactcatag 18424299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 23666496 - 23666467
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  23666496 acatcatcaagtacatttaacaactcatag 23666467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Complemental strand, 25928183 - 25928154
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  25928183 aacataacataatattcacttaataataat 25928154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 26291441 - 26291474
Alignment:
Q  288 cataatattcacttaataataattaatcatatat 321  Q
    ||||| ||||||||||||||||||||||||||||    
T  26291441 cataacattcacttaataataattaatcatatat 26291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 146536 - 146564
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  146536 catcatcaagtacatttaacaactcatag 146564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 838176 - 838148
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  838176 catcatcaagtacatttaacaactcatag 838148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 1203356 - 1203328
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  1203356 catcatcaagtacatttaacaactcatag 1203328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 7520258 - 7520230
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  7520258 catcatcaagtacatttaacaactcatag 7520230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 10607363 - 10607335
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  10607363 catcatcaagtacatttaacaactcatag 10607335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 11660318 - 11660346
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  11660318 catcatcaagtacatttaacaactcatag 11660346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 11858195 - 11858235
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    ||||||||| |||||| ||||||||||| ||||||||||||    
T  11858195 taatcaacaacataaaacttcaacataagcatcttaaacat 11858235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 13891666 - 13891694
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  13891666 catcatcaagtacatttaacaactcatag 13891694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 13892049 - 13892077
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  13892049 catcatcaagtacatttaacaactcatag 13892077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 14420823 - 14420851
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  14420823 catcatcaagtacatttaacaactcatag 14420851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 16005040 - 16005068
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  16005040 catcatcaagtacatttaacaactcatag 16005068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 16110018 - 16109990
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  16110018 catcatcaagtacatttaacaactcatag 16109990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 18606374 - 18606402
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  18606374 catcatcaagtacatttaacaactcatag 18606402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 18871333 - 18871361
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  18871333 catcatcaagtacatttaacaactcatag 18871361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 19649991 - 19649951
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  19649991 taattaacaacataaatcttcaacataagcatcttaaacat 19649951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 20486778 - 20486806
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  20486778 catcatcaagtacatttaacaactcatag 20486806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 24054080 - 24054120
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  24054080 taattaacaacataaatcttcaacataagcatcttaaacat 24054120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 39268356 - 39268328
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  39268356 catcatcaagtacatttaacaactcatag 39268328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 39721232 - 39721260
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  39721232 catcatcaagtacatttaacaactcatag 39721260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 5e-87; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 158 - 328
Target Start/End: Original strand, 16622970 - 16623140
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16622970 cgtactaacaccataattaacatcataaatctttaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 16623069  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16623070 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 16623140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 16759185 - 16759354
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16759185 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 16759284  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  16759285 cacaacattcgatcatcatcaataacataacataatatttacttaataat-attaatcatatatagaacaa 16759354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 11565810 - 11565979
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  11565810 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 11565909  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11565910 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 11565979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 12620000 - 12619831
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  12620000 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 12619901  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12619900 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 12619831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 23988908 - 23989077
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  23988908 tactaacaccaaaatcaacatcataaatcttaaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 23989007  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  23989008 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatattgaacaa 23989077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 22948065 - 22948234
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  22948065 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 22948164  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  22948165 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 22948234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 22952021 - 22952190
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  22952021 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 22952120  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  22952121 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 22952190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 23870509 - 23870678
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  23870509 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 23870608  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  23870609 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 23870678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 23874465 - 23874634
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  23874465 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 23874564  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  23874565 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 23874634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 8242822 - 8242991
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||| ||||||||||||||| ||||||||    
T  8242822 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatatttgataaacaattagcaagtaat 8242921  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  8242922 cacaacattcgatcatcatcaataacataacataatattcatttaataat-attaatcatatatagaacaa 8242991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 201 - 328
Target Start/End: Complemental strand, 31479332 - 31479205
Alignment:
Q  201 atcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcact 300  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31479332 atcttcaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacataatattcact 31479233  T
Q  301 taataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||||||||||    
T  31479232 taataataattaatcatatatggaacaa 31479205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 23394001 - 23394185
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca-----------------atagcatctttgataaa 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||    
T  23394001 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacattatcatcttaaacatcatagcatctttgataaa 23394100  T
Q  243 caattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  23394101 caattaccaagtaatcacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 23394185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 23413909 - 23414093
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaata-----------------gcatctttgataaa 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||    
T  23413909 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaa 23414008  T
Q  243 caattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  23414009 caattaccaagtaatcacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 23414093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 19869603 - 19869746
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||| ||||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19869603 atcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataac 19869702  T
Q  284 ataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  19869703 ataacataatattcacttaataat-attaatcatatatagaacaa 19869746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 14471317 - 14471409
Alignment:
Q  234 tttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaac 326  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14471317 tttgataaacaattaccaagtaatcacaacattcgatcatcatcaataacataacataatattcacttaataataattaatcatatatagaac 14471409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 19869547 - 19869612
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19869547 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 19869612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 27568042 - 27567981
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||| ||||| | ||| ||||||||||||||||||||||    
T  27568042 gcatctttgataaacaattaacaagtattcacatcattcaatcatcatcaataacataacat 27567981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 22075066 - 22075026
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22075066 aacataacataatattcacttaataataattaatcatatat 22075026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 31479360 - 31479320
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataa 198  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31479360 cgtactaacaccataatcaacatcataaatcttcaacataa 31479320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 19298105 - 19298162
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||    
T  19298105 gcatctttgataaacaattatcaagtaatcacagc-ttcaatcatcatcaataacataa 19298162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 12706398 - 12706455
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||| ||||| |||||||||||| | ||| |||||||||||||||||||    
T  12706398 gcatctttgataaaaaattatcaagtaatcacagc-ttcaatcatcatcaataacataa 12706455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 16523855 - 16523770
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  || ||||||||||||| ||| || |||||||||||  | ||| |||||||| |||||||||||||    
T  16523855 aacataaacatcttaaacatcattgcatctttgataatcaaatatcaagtaatcacttcattcaatcatcataaataacataacat 16523770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 16740916 - 16740974
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| |||||||||||| | |   |||||||||||||||||||    
T  16740916 gcatctttgataaacaattatcaagtaatcacagcttcaaatcatcatcaataacataa 16740974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 17803896 - 17803956
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| ||||||||||||   ||| ||||||||||||||||||||||    
T  17803896 gcatctttgataa-caattaacaagtaatcacagtattcaatcatcatcaataacataacat 17803956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 23400974 - 23401007
Alignment:
Q  288 cataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||||||||    
T  23400974 cataatattcacttaataataattaatcatatat 23401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 27554003 - 27553942
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||||||||||  |||||  |||| | ||| ||||||||||||||||||||||    
T  27554003 gcatctttgataaacaattaataagtatccacatcattcaatcatcatcaataacataacat 27553942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 18918403 - 18918363
Alignment:
Q  288 cataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  18918403 cataacattcacttaataataattaatcatatatggtacaa 18918363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 22074958 - 22074919
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  22074958 aacataacataatattcacttaataataa-taatcatatat 22074919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 21740473 - 21740434
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  21740473 cataattaacatcataaatattcaacataaacatcttaaa 21740434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 22862017 - 22862063
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  22862017 aacataacatgatattcacttaataataa-taatcatatatagaacaa 22862063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 21701996 - 21702053
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    ||||||||||||||||| || || ||||||||||| ||| ||| |||||||||||||||    
T  21701996 gcatctttgataaacaagtatcacgtaatcacaac-ttcaatcttcatcaataacataa 21702053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Original strand, 1643471 - 1643500
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  1643471 aacataacataatattcacttaataataat 1643500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 1643619 - 1643652
Alignment:
Q  288 cataatattcacttaataataattaatcatatat 321  Q
    ||||| ||||||||||||||||||||||||||||    
T  1643619 cataacattcacttaataataattaatcatatat 1643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Original strand, 2076519 - 2076548
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  2076519 aacataacataatattcacttaataataat 2076548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Original strand, 2076635 - 2076664
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  2076635 aacataacataatattcacttaataataat 2076664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 9482711 - 9482632
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  ||||||| |||||||||||||| ||||||||||| |  ||| ||||| ||||||||||||    
T  9482711 cataatcagtcttaaacaacatagcatccttgataaacaattatcaagtaatcac-agtttcaatcataatcaataacata 9482632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Original strand, 23400889 - 23400918
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  23400889 aacataacataatattcacttaataataat 23400918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 25767526 - 25767477
Alignment:
Q  241 aacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||| |||||||||||| | ||| ||||||| ||||||||||||||    
T  25767526 aacaattatcaagtaatcacagcattcaatcatcaccaataacataacat 25767477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 1254195 - 1254223
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  1254195 catcatcaagtacatttaacaactcatag 1254223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 12941257 - 12941285
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  12941257 catcatcaagtacatttaacaactcatag 12941285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 19862593 - 19862633
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  19862593 taattaacaacataaatcttcaacataagcatcttaaacat 19862633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 19872735 - 19872775
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  19872735 taattaacaacataaatcttcaacataagcatcttaaacat 19872775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 23400714 - 23400742
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  23400714 catcatcaagtacatttaacaactcatag 23400742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 23538017 - 23538045
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  23538017 catcatcaagtacatttaacaactcatag 23538045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 27222868 - 27222896
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  27222868 catcatcaagtacatttaacaactcatag 27222896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 5e-87; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 158 - 328
Target Start/End: Complemental strand, 39245111 - 39244941
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39245111 cgtactaacaccataattaacatcataaatctttaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 39245012  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39245011 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 39244941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 158 - 328
Target Start/End: Complemental strand, 39248666 - 39248496
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39248666 cgtactaacaccataattaacatcataaatctttaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 39248567  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39248566 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 39248496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 158 - 328
Target Start/End: Complemental strand, 41389559 - 41389389
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41389559 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 41389460  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  41389459 cacaacgttcgatcatcatcaataacataatataatattcacttaataataattaatcatatatgaaacaa 41389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 1009671 - 1009840
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  1009671 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 1009770  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  1009771 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 1009840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 1926311 - 1926142
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  1926311 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 1926212  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  1926211 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 1926142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 20925325 - 20925156
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  20925325 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 20925226  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  20925225 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 20925156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 16376562 - 16376393
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  || |||||||||||||||||||||||||||||    
T  16376562 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatggcatctttgataaacaattaccaagtaat 16376463  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  16376462 cacaacatttgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 16376393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 52634757 - 52634911
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatca 259  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||             ||||||||||||||||||||||||||||||||    
T  52634757 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacatcat-------------agcatctttgataaacaattaccaagtaatca 52634843  T
Q  260 caacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  52634844 caacattcgatcatcatcaataacataacataatattcacttaataat-actaatcatatatagaacaa 52634911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 192 - 328
Target Start/End: Original strand, 33796553 - 33796694
Alignment:
Q  192 aacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataaca 289  Q
    ||||||| |||||||||||  || ||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  33796553 aacataatcatcttaaacagtattatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcttcaataacataaca 33796652  T
Q  290 taatattcact---taataataattaatcatatatggaacaa 328  Q
    |||||||||||   ||||||||||||||||||||| ||||||    
T  33796653 taatattcacttaataataataattaatcatatatagaacaa 33796694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 33796491 - 33796556
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33796491 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcaccttaaaca 33796556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 3705497 - 3705436
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  3705497 gcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacat 3705436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 36819705 - 36819644
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||| ||||||||||||    
T  36819705 gcatctttgataaacaattatcaagtaatcacagcattcaatcatcatctataacataacat 36819644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 18394395 - 18394334
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||| | ||| |||||||| | ||| ||||||||||||||||||||||    
T  18394395 gcatctttgataaacaatcatcaattaatcacatcattcaatcatcatcaataacataacat 18394334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 21172711 - 21172771
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  21172711 gcatctttgataa-caattatcaagtaatcacagcattcaatcatcatcaataacataacat 21172771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 21312827 - 21312887
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  21312827 gcatctttgataa-caattatcaagtaatcccaacattcaatcatcatcaataacataacat 21312887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 22831829 - 22831790
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  22831829 cataattaacatcataaatcttcaacataaacatcttaaa 22831790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 328
Target Start/End: Complemental strand, 41389310 - 41389276
Alignment:
Q  294 attcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||||||||    
T  41389310 attcacttaataataattaatcatatatggaacaa 41389276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 3473409 - 3473339
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 260  Q
    ||||||||||||||| |||| ||||||||||||||  || ||||||||||||| ||| || |||||||||||    
T  3473409 caacataaacatcttcaaca-aatcatcttaaacatcattgcatctttgataatcaaatatcaagtaatcac 3473339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 46975176 - 46975231
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcaca 261  Q
    |||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||    
T  46975176 cataatcagtcttaaacaacatagcatctttgataaacaattatcaagtaatcaca 46975231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 18182597 - 18182512
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  |||||||| |||||||  || || |||||||||||  | ||| |||||||| |||||||||||||    
T  18182597 aacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaatcatcataaataacataacat 18182512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 41801080 - 41801043
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatat 319  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  41801080 aacataacataatattcacttaataataa-taatcatat 41801043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Complemental strand, 20229928 - 20229895
Alignment:
Q  288 cataatattcacttaataataattaatcatatat 321  Q
    ||||| ||||||||||||||||||||||||||||    
T  20229928 cataacattcacttaataataattaatcatatat 20229895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Original strand, 21406469 - 21406498
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  21406469 aacataacataatattcacttaataataat 21406498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 39245214 - 39245185
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  39245214 acatcatcaagtacatttaacaactcatag 39245185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 39248769 - 39248740
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  39248769 acatcatcaagtacatttaacaactcatag 39248740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 41389708 - 41389679
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  41389708 acatcatcaagtacatttaacaactcatag 41389679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 42865716 - 42865679
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  42865716 taattaacaacataaatcttcaacataaacatcttaaa 42865679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 16370961 - 16370989
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  16370961 catcatcaagtacatttaacaactcatag 16370989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 22132141 - 22132113
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  22132141 catcatcaagtacatttaacaactcatag 22132113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 22469204 - 22469164
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| ||||||||||||||||||||||| |||||||    
T  22469204 taattaacaacataaatcttcaacataaacatcgtaaacat 22469164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 41801321 - 41801293
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  41801321 catcatcaagtacatttaacaactcatag 41801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 2e-83; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 158 - 321
Target Start/End: Original strand, 15223727 - 15223891
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatcttt-gataaacaattaccaagtaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15223727 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatcttttgataaacaattaccaagtaa 15223826  T
Q  257 tcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15223827 tcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatat 15223891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 9555478 - 9555647
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  9555478 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 9555577  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  9555578 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 9555647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 14758584 - 14758415
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  14758584 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 14758485  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14758484 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 14758415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 14955349 - 14955180
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  14955349 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 14955250  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14955249 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 14955180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 33741248 - 33741417
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  33741248 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 33741347  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  33741348 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 33741417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 5757968 - 5757799
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  5757968 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 5757869  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  5757868 cacaacattcgatcatcatcaataacataacataatattcatttaataat-attaatcatatatagaacaa 5757799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 4562443 - 4562274
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  ||| |||||||||  ||||||||||||||||||||||||||||||||    
T  4562443 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcttcttaaacatcatagcatctttgataaacaattaccaagtaat 4562344  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  4562343 cacaacattcgatcatcatcaataacataacatgatattcacttaataat-attaatcatatatagaacaa 4562274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 25688851 - 25689020
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  25688851 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 25688950  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  25688951 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 25689020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 186 - 328
Target Start/End: Original strand, 12486659 - 12486802
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||| ||||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12486659 atcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataac 12486758  T
Q  284 ataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  12486759 ataacataatattcacttaataat-attaatcatatatagaacaa 12486802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 12486603 - 12486668
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486603 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 12486668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 13813737 - 13813683
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13813737 taatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 13813683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 13818256 - 13818195
Alignment:
Q  164 aacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13818256 aacatcataattaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 13818195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 15353738 - 15353677
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  15353738 gcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacat 15353677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 20158267 - 20158227
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20158267 aacataacataatattcacttaataataattaatcatatat 20158227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 20160943 - 20160903
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20160943 aacataacataatattcacttaataataattaatcatatat 20160903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 20163721 - 20163681
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20163721 aacataacataatattcacttaataataattaatcatatat 20163681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 10712012 - 10712051
Alignment:
Q  282 acataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10712012 acataacataatattcacttaataataattaatcatatat 10712051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 10925782 - 10925821
Alignment:
Q  282 acataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10925782 acataacataatattcacttaataataattaatcatatat 10925821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 1952156 - 1952099
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||    
T  1952156 gcatctttgataaacaattatcaagtaatcacagc-ttcaatcatcatcaataacataa 1952099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 11250991 - 11250930
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||  ||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||    
T  11250991 gcatcttcaataaacaattagcaagtaatcacatcgttcaatcatcatcaacaacataacat 11250930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 36134346 - 36134286
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  36134346 gcatctttgataa-caattatcaagtaatcacagcattcaatcatcatcaataacataacat 36134286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 287
Target Start/End: Original strand, 15093394 - 15093492
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    ||||||||||||||| ||||||| |||||||||||  |||||||| |||||||  || || |||||||||||  ||||  | |||||| ||||||||||    
T  15093394 caacataaacatcttcaacataagcatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcgtttaaacatcataaataacataa 15093492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 2014465 - 2014544
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  ||||||| | ||||||||||||||||||||||||| | ||| ||||| ||||||||||||    
T  2014465 cataatcagtcttaaacaacatagcatcctggataaacaattaccaagtaatcacagc-ttcaatcataatcaataacata 2014544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 16243819 - 16243740
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  |||||||||||||||||||||| |||||| ||||| | ||| ||||| ||||||||||||    
T  16243819 cataatcagtcttaaacaacatagcatctttgataaacaattatcaagtagtcacagc-ttcaatcataatcaataacata 16243740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 18603127 - 18603067
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||| |||||||||    
T  18603127 gcatctttgataaacaattatcacttaatcacaac-ttcaatcatcatcaatgacataacat 18603067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 22634783 - 22634750
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatct 204  Q
    ||||||||||||||||||||||||||||||||||    
T  22634783 taatcaacatcataaatcttcaacataaacatct 22634750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 13569175 - 13569215
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  13569175 taattaacaacataaatcttcaacataaacatcttaaacat 13569215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 20158159 - 20158120
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  20158159 aacataacataatattcacttaataataa-taatcatatat 20158120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 20163613 - 20163574
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  20163613 aacataacataatattcacttaataataa-taatcatatat 20163574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 3412507 - 3412564
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||| ||||||    
T  3412507 gcatctttgataaacaattatcacttaatcacaac-ttcaatcatcatcaatgacataa 3412564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 13818219 - 13818162
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaac--aatagcatctttgataa 241  Q
    ||||| ||||||| |||||||||||| ||||||||||||  ||||||||| |||||||    
T  13818219 atcttaaacataatcatcttaaacatcatcatcttaaacataatagcatcattgataa 13818162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 15125546 - 15125504
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||||| |||| |||||||||||||||||| ||||||||||||    
T  15125546 cataattaacaacataaatcttcaacataaccatcttaaacat 15125504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 17152880 - 17152823
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| ||| |||||||||||||||    
T  17152880 gcatctttgataaacaattatcacataatcacaac-ttcaatcgtcatcaataacataa 17152823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 18222774 - 18222717
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    ||||| |||||||||||||| ||  |||||||||| ||| |||||||||||||||||||    
T  18222774 gcatcattgataaacaattatcacataatcacaac-ttcaatcatcatcaataacataa 18222717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 18609699 - 18609642
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||| ||||||    
T  18609699 gcatctttgataaacaattatcacttaatcacaac-ttcaatcatcatcaatgacataa 18609642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 13813672 - 13813639
Alignment:
Q  192 aacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||| ||||||||||||||||||||||||||    
T  13813672 aacataatcatcttaaacataatcatcttaaaca 13813639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 15223581 - 15223610
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  15223581 acatcatcaagtacatttaacaactcatag 15223610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 18236603 - 18236659
Alignment:
Q  230 catctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    ||||||||||||||||||| ||  ||| |||||| ||| |||||||||||||||||||    
T  18236603 catctttgataaacaattatcacataaacacaac-ttcaatcatcatcaataacataa 18236659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 19758019 - 19757940
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  |||| ||||||||||||||||| |||||||||||| | | | ||||| ||||||||||||    
T  19758019 cataatcagtcttaaacaacatagcgtctttgataaacaattatcaagtaatcacagc-tccaatcataatcaataacata 19757940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 19781787 - 19781866
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  |||| ||||||||||||||||| |||||||||||| | | | ||||| ||||||||||||    
T  19781787 cataatcagtcttaaacaacatagcgtctttgataaacaattatcaagtaatcacagc-tccaatcataatcaataacata 19781866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 23996615 - 23996574
Alignment:
Q  163 taacaccataatcaacatcataaatcttcaacataaacatct 204  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||    
T  23996615 taacatcataaccaatatcataaatcttcaacataaacatct 23996574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 27533008 - 27533041
Alignment:
Q  288 cataatattcacttaataataattaatcatatat 321  Q
    ||||| ||||||||||||||||||||||||||||    
T  27533008 cataacattcacttaataataattaatcatatat 27533041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 631790 - 631762
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  631790 catcatcaagtacatttaacaactcatag 631762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 13813875 - 13813847
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  13813875 catcatcaagtacatttaacaactcatag 13813847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 13818363 - 13818335
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  13818363 catcatcaagtacatttaacaactcatag 13818335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 15533255 - 15533283
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  15533255 catcatcaagtacatttaacaactcatag 15533283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 17052488 - 17052460
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  17052488 catcatcaagtacatttaacaactcatag 17052460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 18211640 - 18211668
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  18211640 catcatcaagtacatttaacaactcatag 18211668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 20160835 - 20160796
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  20160835 aacataacataatattcactgaataataa-taatcatatat 20160796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 22634969 - 22634941
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  22634969 catcatcaagtacatttaacaactcatag 22634941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 23997009 - 23996981
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  23997009 catcatcaagtacatttaacaactcatag 23996981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 24048427 - 24048399
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  24048427 catcatcaagtacatttaacaactcatag 24048399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 30145819 - 30145847
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  30145819 catcatcaagtacatttaacaactcatag 30145847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 36036988 - 36037016
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  36036988 catcatcaagtacatttaacaactcatag 36037016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 49549125 - 49549097
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  49549125 catcatcaagtacatttaacaactcatag 49549097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 3e-73; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 18355222 - 18355392
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||  ||||||||||||||||||||||||||||||||    
T  18355222 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatatcgtcttaaacatcatagcatctttgataaacaattaccaagtaat 18355321  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18355322 cacaacattcgatcatcatcaataacataacataatattcacttaataataattaatcatatatagaacaa 18355392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 172 - 328
Target Start/End: Complemental strand, 40724682 - 40724524
Alignment:
Q  172 aatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcga 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||| |||||    
T  40724682 aatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacatcatagcatctttgctaaacaattaccaagtaatcacaacattcga 40724583  T
Q  270 tcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40724582 tcatcatcaataacataacataatattcacttaataataattaatcatatatagaacaa 40724524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 19473842 - 19473673
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  19473842 tactaacaccataatcaacatcataaatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 19473743  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  19473742 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 19473673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 20294849 - 20295018
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  || |||||||||||||||||||||||||||||    
T  20294849 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatggcatctttgataaacaattaccaagtaat 20294948  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  20294949 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 20295018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 201 - 328
Target Start/End: Original strand, 10752026 - 10752153
Alignment:
Q  201 atcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcact 300  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10752026 atcttcaacataatcatcttaaacaatagcatctttgataaacaattatcaagtaatcacaacattcgatcatcatcaataacataacataatattcact 10752125  T
Q  301 taataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||||||||||    
T  10752126 taataataattaatcatatatggaacaa 10752153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 160 - 289
Target Start/End: Original strand, 11219915 - 11220045
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||||||| | | ||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  11219915 tactaacaccataatcaacataa-acatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 11220013  T
Q  258 cacaacgttcgatcatcatcaataacataaca 289  Q
    |||||| |||||||||||||||||||||||||    
T  11220014 cacaacattcgatcatcatcaataacataaca 11220045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 160 - 289
Target Start/End: Original strand, 11224501 - 11224631
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||||||| | | ||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  11224501 tactaacaccataatcaacataa-acatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 11224599  T
Q  258 cacaacgttcgatcatcatcaataacataaca 289  Q
    |||||| |||||||||||||||||||||||||    
T  11224600 cacaacattcgatcatcatcaataacataaca 11224631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 160 - 289
Target Start/End: Original strand, 11230313 - 11230443
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||||||||||| | | ||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  11230313 tactaacaccataatcaacataa-acatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 11230411  T
Q  258 cacaacgttcgatcatcatcaataacataaca 289  Q
    |||||| |||||||||||||||||||||||||    
T  11230412 cacaacattcgatcatcatcaataacataaca 11230443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 166 - 289
Target Start/End: Original strand, 11228330 - 11228454
Alignment:
Q  166 caccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaac 263  Q
    ||||||||||||||| | | ||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  11228330 caccataatcaacataa-acatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaac 11228428  T
Q  264 gttcgatcatcatcaataacataaca 289  Q
     |||||||||||||||||||||||||    
T  11228429 attcgatcatcatcaataacataaca 11228454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 23439625 - 23439726
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| |||||||  ||||| |||||||||||  | ||| |||||||  |||||||||||    
T  23439625 caacataaacatcttcaacataatcatcttaaacatcatagcatcattgataacaaattatcaagtaatcacttcattcaatcatcacaaataacataac 23439724  T
Q  289 at 290  Q
    ||    
T  23439725 at 23439726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 23450992 - 23451093
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| |||||||  ||||| |||||||||||  | ||| |||||||  |||||||||||    
T  23450992 caacataaacatcttcaacataatcatcttaaacatcatagcatcattgataacaaattatcaagtaatcacttcattcaatcatcacaaataacataac 23451091  T
Q  289 at 290  Q
    ||    
T  23451092 at 23451093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 23458236 - 23458337
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| || ||||  ||||| |||||||||||  | ||| |||||||| |||||||||||    
T  23458236 caacataaacatcttcaacataatcatcttaaacatcatagcatcattcataacaaattatcaagtaatcacttcattcaatcatcataaataacataac 23458335  T
Q  289 at 290  Q
    ||    
T  23458336 at 23458337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 23462497 - 23462598
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| || ||||  ||||| |||||||||||  | ||| |||||||| |||||||||||    
T  23462497 caacataaacatcttcaacataatcatcttaaacatcatagcatcattcataacaaattatcaagtaatcacttcattcaatcatcataaataacataac 23462596  T
Q  289 at 290  Q
    ||    
T  23462597 at 23462598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 20911909 - 20911865
Alignment:
Q  277 caataacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20911909 caataacataacataatattcacttaataataattaatcatatat 20911865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 15237977 - 15237930
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  15237977 aacataacataatattcacttaataataattaatcatatatgtaacaa 15237930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 11226495 - 11226540
Alignment:
Q  190 tcaacataaacatcttaaacataatcatcttaaacaatagcatctt 235  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11226495 tcaacataaacatcttaaacataatcatcttaaacaatatcatctt 11226540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 10751998 - 10752038
Alignment:
Q  158 cgtactaacaccataatcaacatcataaatcttcaacataa 198  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10751998 cgtactaacaccataatcaacatcataaatcttcaacataa 10752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 24221568 - 24221623
Alignment:
Q  235 ttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  24221568 ttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacat 24221623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 1859452 - 1859351
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| |||||||||||||||||||  ||| |||| |||||||  || || |||||||||||| | ||| |||||||  | |||||||||    
T  1859452 caacataaacatctttaacataatcatcttaaacatcataacatcattgataataaaatatcaagtaatcacatcattcaatcatcacaattaacataac 1859353  T
Q  289 at 290  Q
    ||    
T  1859352 at 1859351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 17919587 - 17919525
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaac-gttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| |  ||| ||||||||||||||||||||||    
T  17919587 gcatctttgataaacaattatcaagtaatcacatcatttcaatcatcatcaataacataacat 17919525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 17410179 - 17410239
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||||| ||| ||||||| ||||||||||||||    
T  17410179 gcatctttgataa-caattatcaagtaatcacaacattcaatcatcaccaataacataacat 17410239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 33408914 - 33408993
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  |||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||    
T  33408914 cataatcagtcttaaacaacatagcatctttgataaacaattatcaagtaatcacagc-ttcaatcataatcaataacata 33408993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 328
Target Start/End: Complemental strand, 15237851 - 15237817
Alignment:
Q  294 attcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||||||||||||||    
T  15237851 attcacttaataataattaatcatatatggaacaa 15237817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 18773913 - 18773970
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||||||||||    
T  18773913 gcatctttgataaacaattatcacataatcacaac-ttcaatcatcatcaataacataa 18773970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 18783756 - 18783813
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||||||||||    
T  18783756 gcatctttgataaacaattatcacataatcacaac-ttcaatcatcatcaataacataa 18783813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 23535962 - 23535904
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||| ||| ||||||||||||   ||| |||||||||||||||||||    
T  23535962 gcatctttgataaacagttatcaagtaatcacagatttcaatcatcatcaataacataa 23535904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 26743141 - 26743084
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| || ||||||||||| ||| ||||||||||| |||||||    
T  26743141 gcatctttgataaacaattatcacgtaatcacaac-ttcaatcatcatcaacaacataa 26743084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 11226481 - 11226545
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||| | | ||||| ||||||| |||||||||||  |||||||||||||    
T  11226481 tactaacaccataatcaacataa-acatcttaaacataatcatcttaaacaatatcatcttaaaca 11226545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 24768232 - 24768193
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  24768232 aacataacataatat-cacttaataataattaatcatatat 24768193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 123747 - 123685
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgtt-cgatcatcatcaataacataacat 290  Q
    |||||||  ||||||||||| |||||||||||| | || | ||||||||||||||||||||||    
T  123747 gcatcttcaataaacaattatcaagtaatcacatcatttcaatcatcatcaataacataacat 123685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 17730804 - 17730747
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||| ||||||    
T  17730804 gcatctttgataaacaattatcacttaatcacaac-ttcaatcatcatcaatgacataa 17730747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 18770433 - 18770395
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaa 207  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  18770433 cataattaacatcataaatcttcaacataagcatcttaa 18770395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 225
Target Start/End: Original strand, 20766628 - 20766662
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||| |||||||||||||||||||    
T  20766628 caacataaacatcttcaacataatcatcttaaaca 20766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 21367137 - 21367052
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  |||||||| |||||||  || || |||||||||||  | ||| |||||||| |||||||||||||    
T  21367137 aacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaatcatcataaataacataacat 21367052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 42805130 - 42805187
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| |   |||||||||| ||| |||||||||||||||||||    
T  42805130 gcatctttgataaacaattatcgcataatcacaac-ttcaatcatcatcaataacataa 42805187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 9774975 - 9775004
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  9774975 acatcatcaagtacatttaacaactcatag 9775004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 10751852 - 10751881
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  10751852 acatcatcaagtacatttaacaactcatag 10751881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 15238161 - 15238132
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  15238161 acatcatcaagtacatttaacaactcatag 15238132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 22108493 - 22108464
Alignment:
Q  12 acatcatcaagtacatttaacaactcatag 41  Q
    ||||||||||||||||||||||||||||||    
T  22108493 acatcatcaagtacatttaacaactcatag 22108464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Complemental strand, 40727259 - 40727230
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  40727259 aacataacataatattcacttaataataat 40727230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 16673863 - 16673918
Alignment:
Q  230 catctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    ||||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||    
T  16673863 catctttaataaacaattatcaagtaatcacagc-ttcaatcataatcaataacata 16673918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 19510498 - 19510526
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  19510498 catcatcaagtacatttaacaactcatag 19510526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 21276016 - 21276056
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||||||||||||||||||| || ||||||||||||    
T  21276016 taattaacatcataaatcttcaacaaaagcatcttaaacat 21276056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 21886903 - 21886943
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  21886903 taattaacatcataaatcttcaacgtaagcatcttaaacat 21886943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 22120634 - 22120606
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  22120634 catcatcaagtacatttaacaactcatag 22120606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 22339048 - 22339076
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  22339048 catcatcaagtacatttaacaactcatag 22339076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 23113445 - 23113417
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  23113445 catcatcaagtacatttaacaactcatag 23113417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 23200973 - 23201013
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  23200973 taattaacaacataaatcttcaacataagcatcttaaacat 23201013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 23501813 - 23501773
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  23501813 taattaacaacataaatcttcaacataagcatcttaaacat 23501773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 26703691 - 26703731
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  26703691 taattaacaacataaatcttcaacataagcatcttaaacat 26703731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 26973424 - 26973464
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  26973424 taattaacaacataaatcttcaacataagcatcttaaacat 26973464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 28372124 - 28372096
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  28372124 catcatcaagtacatttaacaactcatag 28372096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 37600051 - 37600023
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  37600051 catcatcaagtacatttaacaactcatag 37600023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 38146461 - 38146433
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  38146461 catcatcaagtacatttaacaactcatag 38146433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 5016 - 4847
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  5016 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 4917  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  4916 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 4847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 21977790 - 21977621
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  21977790 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 21977691  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  21977690 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 21977621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 21973699 - 21973530
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  21973699 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 21973600  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  21973599 cacaacattcgatcattatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 21973530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 22110999 - 22111168
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  22110999 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 22111098  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  22111099 cacaacattcgatcatcatcaataacataacataatattcatttaataat-attaatcatatatagaacaa 22111168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 43250759 - 43250928
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  43250759 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 43250858  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  43250859 cacaacattcgatcatcatcaataacataacataatattcatttaataat-attaatcatatatagaacaa 43250928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 21829149 - 21828965
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaata-----------------gcatctttgataaa 242  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||    
T  21829149 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaa 21829050  T
Q  243 caattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  21829049 caattaccaagtaatcacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 21828965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 30941283 - 30941099
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaata-----------------gcatctttgataaa 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||                 ||||||||||||||    
T  30941283 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaatataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaa 30941184  T
Q  243 caattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  30941183 caattaccaagtaatcacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 30941099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 18863767 - 18863624
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  18863767 atcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgacaaacaattaccaagtaatcacaacattcgatcatcatcaataac 18863668  T
Q  284 ataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  18863667 ataacataatattcacttaataat-attaatcatatatagaacaa 18863624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 18863823 - 18863758
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18863823 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 18863758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 20856872 - 20856811
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  20856872 gcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacat 20856811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 14398839 - 14398799
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14398839 aacataacataatattcacttaataataattaatcatatat 14398799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 21386515 - 21386555
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21386515 aacataacataatattcacttaataataattaatcatatat 21386555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 21410088 - 21410127
Alignment:
Q  282 acataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21410088 acataacataatattcacttaataataattaatcatatat 21410127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 21804580 - 21804619
Alignment:
Q  282 acataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21804580 acataacataatattcacttaataataattaatcatatat 21804619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 16231870 - 16231813
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||    
T  16231870 gcatctttgataaacaattatcaagtaatcacagc-ttcaatcatcatcaataacataa 16231813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 22044594 - 22044651
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||    
T  22044594 gcatctttgataaacaattatcaagtaatcacagc-ttcaatcatcatcaataacataa 22044651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 23847434 - 23847355
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  |||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||    
T  23847434 cataatcagtcttaaacaacatagcatctttgataaacaattatcaagtaatcacagc-ttcaatcataatcaataacata 23847355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 16184339 - 16184410
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 260  Q
    ||||||||||||||||||||||| |||||||||||  |||||||| |||||||  || || |||||||||||    
T  16184339 caacataaacatcttaaacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcac 16184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 21386407 - 21386447
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  21386407 aacataacataacattcacttaataataattaatcatatat 21386447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 23833882 - 23833939
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||||||||||    
T  23833882 gcatctttgataaacaattatcacataatcacaac-ttcaatcatcatcaataacataa 23833939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 204
Target Start/End: Complemental strand, 19259996 - 19259961
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatct 204  Q
    |||||| |||||||||||||||||||||||||||||    
T  19259996 cataattaacatcataaatcttcaacataaacatct 19259961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 20466489 - 20466450
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  20466489 cataattaacatcataaatcttcaacataagcatcttaaa 20466450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Complemental strand, 15924284 - 15924251
Alignment:
Q  288 cataatattcacttaataataattaatcatatat 321  Q
    ||||| ||||||||||||||||||||||||||||    
T  15924284 cataacattcacttaataataattaatcatatat 15924251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 21169229 - 21169188
Alignment:
Q  170 ataatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||    
T  21169229 ataataaacatcatacatcttcaacataagcatcttaaacat 21169188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 19898701 - 19898741
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    ||||||||| |||||| ||||||||||| ||||||||||||    
T  19898701 taatcaacaacataaaacttcaacataagcatcttaaacat 19898741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 21162563 - 21162523
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| ||||||||| ||||||||||||| ||||||||||||    
T  21162563 taattaacatcatacatcttcaacataagcatcttaaacat 21162523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 21328602 - 21328630
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  21328602 catcatcaagtacatttaacaactcatag 21328630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 23777338 - 23777298
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||||||||||||||||||| || ||||||||||||    
T  23777338 taattaacatcataaatcttcaacaaaagcatcttaaacat 23777298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 27942728 - 27942700
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  27942728 catcatcaagtacatttaacaactcatag 27942700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 44385876 - 44385848
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  44385876 catcatcaagtacatttaacaactcatag 44385848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 2e-68; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 10102966 - 10102797
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  10102966 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 10102867  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  10102866 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 10102797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 24629637 - 24629468
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  24629637 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 24629538  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  24629537 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 24629468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 24648303 - 24648472
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  24648303 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 24648402  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  24648403 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 24648472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 27380510 - 27380341
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  27380510 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 27380411  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27380410 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 27380341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 27384556 - 27384387
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  27384556 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 27384457  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27384456 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 27384387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 30346173 - 30346004
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  30346173 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 30346074  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  30346073 cacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 30346004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 27600780 - 27600949
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  27600780 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 27600879  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  27600880 cacaacattcgatcatcatcaataacataacataatattcatttaataat-attaatcatatatagaacaa 27600949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 1282384 - 1282568
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaata-----------------gcatctttgataaa 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||    
T  1282384 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaa 1282483  T
Q  243 caattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  1282484 caattaccaagtaatcacaacatttgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 1282568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 41532105 - 41531962
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||| ||||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41532105 atcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataac 41532006  T
Q  284 ataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  41532005 ataacataatattcacttaataat-attaatcatatatagaacaa 41531962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 41532161 - 41532096
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41532161 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 41532096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 24174485 - 24174546
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  24174485 gcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacat 24174546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 290
Target Start/End: Complemental strand, 22812397 - 22812291
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||||  || || |||||||||||  | ||| ||| |||| |||| |    
T  22812397 atcttcaacataatcatcttaaacataatcatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattctatcttcataaatatc 22812298  T
Q  284 ataacat 290  Q
    |||||||    
T  22812297 ataacat 22812291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 31344279 - 31344326
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31344279 aacataacataatattcacttaataataattaatcatatatggtacaa 31344326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 19928902 - 19928841
Alignment:
Q  225 aatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||||||| |||||||||||| | ||| ||||| |||||||||||||    
T  19928902 aatagcatctttgataaacaattatcaagtaatcacagc-ttcaatcataatcaataacataa 19928841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 25961965 - 25961903
Alignment:
Q  229 gcatctttgataaacaattaccaagtaa-tcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| ||||||| ||||| | ||| ||||||||||||||||||||||    
T  25961965 gcatctttgataaacaattatcaagtaaatcacatcattcaatcatcatcaataacataacat 25961903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 25964203 - 25964102
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| |||||| ||||||||||||  |||||||| |||||||  || || |||||||||||    ||| |||||||| |||||||||||    
T  25964203 caacataaacatcttcaacatattcatcttaaacatcatagcatcattgataataaaatatcaagtaatcactttattcaatcatcataaataacataac 25964104  T
Q  289 at 290  Q
    ||    
T  25964103 at 25964102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 19692042 - 19691982
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  19692042 gcatctttgataa-caattaacaagtaatcacagcattcaatcatcatcaataacataacat 19691982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 24735102 - 24735161
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataaca 289  Q
    ||||||||||||| |||||| |||||||||||| | ||| |||||||||||||||||||||    
T  24735102 gcatctttgataa-caattatcaagtaatcacatcattcaatcatcatcaataacataaca 24735161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 24655770 - 24655708
Alignment:
Q  229 gcatctttg-ataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||| ||||||||||| |||||||||||| | ||| |||||||||||||||| |||||    
T  24655770 gcatctttggataaacaattatcaagtaatcacatcattcaatcatcatcaataacaaaacat 24655708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 37524329 - 37524414
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  || ||||||||||||| ||| || |||||||||||  | ||| |||||||| |||||||||||||    
T  37524329 aacataaacatcttaaacatcattgcatctttgataatcaaatatcaagtaatcacttcattcaatcatcataaataacataacat 37524414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 40622715 - 40622673
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  40622715 cataattaacatcataaatcttcaacataagcatcttaaacat 40622673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 24869571 - 24869626
Alignment:
Q  235 ttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||| ||| |||||||| | ||| |||||||| |||||||||||||    
T  24869571 ttgataaacaattatcaaataatcacatcattcaatcatcatgaataacataacat 24869626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 9784216 - 9784253
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatat 319  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  9784216 aacataacataatattcacttaataataa-taatcatat 9784253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 225
Target Start/End: Complemental strand, 22812407 - 22812373
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||| |||||||||||||||||||    
T  22812407 caacataaacatcttcaacataatcatcttaaaca 22812373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 24673185 - 24673286
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| ||||||| |||||||||||  ||| | || |||||||  || |||| |||||||||  | ||| |||||||| |||||| ||||    
T  24673185 caacataaacatcttcaacataagcatcttaaacatcataacttcattgataataaaatacccagtaatcacttcattcaatcatcataaataacctaac 24673284  T
Q  289 at 290  Q
    ||    
T  24673285 at 24673286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 24679810 - 24679911
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| ||||||| |||||||||||  ||| | || |||||||  || |||| |||||||||  | ||| |||||||| |||||| ||||    
T  24679810 caacataaacatcttcaacataagcatcttaaacatcataacttcattgataataaaatacccagtaatcacttcattcaatcatcataaataacctaac 24679909  T
Q  289 at 290  Q
    ||    
T  24679910 at 24679911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 6481820 - 6481848
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  6481820 catcatcaagtacatttaacaactcatag 6481848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 6485287 - 6485315
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  6485287 catcatcaagtacatttaacaactcatag 6485315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 9240710 - 9240738
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  9240710 catcatcaagtacatttaacaactcatag 9240738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 19663600 - 19663572
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  19663600 catcatcaagtacatttaacaactcatag 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 20260293 - 20260321
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  20260293 catcatcaagtacatttaacaactcatag 20260321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 21074550 - 21074522
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  21074550 catcatcaagtacatttaacaactcatag 21074522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 23020204 - 23020133
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 260  Q
    |||||||||||| || ||||||| |||||||||||  |||||||| |||||||  || || |||||||||||    
T  23020204 caacataaacattttcaacataagcatcttaaacatcatagcatcattgataataaaatatcaagtaatcac 23020133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 68338 - 68169
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  68338 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 68239  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  68238 cacaacattcgatcatcatcaataacataacataatattcatttaataat-attaatcatatatagaacaa 68169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 6177 - 6008
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |  ||||||||||||||||||||||||||||||||    
T  6177 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaatatcatagcatctttgataaacaattaccaagtaat 6078  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  6077 cacaacattcgatcatcatcaataacataacataatattcacttaacaat-attaatcatatatagaacaa 6008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 15293 - 15109
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaata-----------------gcatctttgataaa 242  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||    
T  15293 tactaacaccataatcaacatcatatatcttcaacataaacatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaa 15194  T
Q  243 caattaccaagtaatcacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  15193 caattaccaagtaatcacaacattcgatcatcatcaataacataacataatattcacttaataat-attaatcatatatagaacaa 15109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 106; Significance: 5e-53; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 160 - 321
Target Start/End: Original strand, 79523 - 79683
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaat 257  Q
    ||||||||||||| |||||||||||||||||  |  |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  79523 tactaacaccatagtcaacatcataaatctttga--taaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 79620  T
Q  258 cacaacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatat 321  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  79621 cacaacattcgatcatcatcaataacataacacaatattcacttaataat-attaatcatatat 79683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 62708 - 62675
Alignment:
Q  277 caataacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||||||    
T  62708 caataacataacataatattcacttaataataat 62675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Complemental strand, 66620 - 66591
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  66620 aacataacataatattcacttaataataat 66591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 186 - 328
Target Start/End: Complemental strand, 33818 - 33675
Alignment:
Q  186 atcttcaacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataac 283  Q
    ||||| ||||||| |||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33818 atcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatcatcaataac 33719  T
Q  284 ataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  33718 ataacataatattcacttaataat-attaatcatatatagaacaa 33675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 33874 - 33809
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33874 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaaca 33809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 11465 - 11619
Alignment:
Q  160 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatca 259  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||             || ||||||||||||||| |||||||||||||    
T  11465 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacatcat-------------agtatctttgataaacaactaccaagtaatca 11551  T
Q  260 caacgttcgatcatcatcaataacataacataatattcacttaataataattaatcatatatggaacaa 328  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  11552 caacattcgatcatcatcaataacataacataatattcatttaataat-attaatcatatatagaacaa 11619  T

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Target: scaffold1220 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 1452 - 1537
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  || |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  1452 aacataaacatcttaaacatcattgcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacat 1537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 18897 - 18958
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||||    
T  18897 gcatctttgataaacagttatcaagtaatcacaacattcaatcatcatcaataacataacat 18958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 12619 - 12674
Alignment:
Q  235 ttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||| ||| |||||||||||| | ||| ||||||||||||||||||||||    
T  12619 ttgataaacagttatcaagtaatcacagcattcaatcatcatcaataacataacat 12674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 195357 - 195296
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  195357 gcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacataacat 195296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 173003 - 173064
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  173003 gcatctttgataaacaattatcaagtaatcacagcattcaatcatcatcaataacataacat 173064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 204498 - 204538
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  204498 taattaacaacataaatcttcaacataaacatcttaaacat 204538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 422977 - 422920
Alignment:
Q  207 aacataatcatcttaaacaata---gcatctttgataaacaattaccaagtaatcaca 261  Q
    ||||||| |||||||||||||    |||||||||||||||||||| ||||||||||||    
T  422977 aacataaacatcttaaacaatcattgcatctttgataaacaattatcaagtaatcaca 422920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 178706 - 178738
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcaca 261  Q
    |||||||||||||||||||| ||||||||||||    
T  178706 gcatctttgataaacaattatcaagtaatcaca 178738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 414505 - 414419
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaa-tcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  || |||||||||||||||||||| ||||||| ||||| | ||| ||||||||||||||||||||||    
T  414505 aacataaacatcttaaacatcattgcatctttgataaacaattatcaagtaaatcacatcattcaatcatcatcaataacataacat 414419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 100782 - 100839
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||| ||||||||||||||| |||||||||||| | ||| |||| ||||||||||||||    
T  100782 gcatttttgataaacaattatcaagtaatcacagc-ttcaatcaccatcaataacataa 100839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 7136 - 7217
Alignment:
Q  207 aacataatcatcttaaacaata--gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    ||||||| |||||||||||  |  |||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||    
T  7136 aacataaacatcttaaacatcaatgcatctttgataaacaattatcaagtaatcacatcattcaatcatcatcaataacata 7217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 20408 - 20347
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||| ||||||||||||    
T  20408 gcatctttgataaacaattatcaagtaatcacagcattcaatcatcatcgataacataacat 20347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 228766 - 228705
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||| ||| |||||||||||| | ||| ||||||||||||||||||||||    
T  228766 gcatctttgataaacagttatcaagtaatcacagcattcaatcatcatcaataacataacat 228705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 577 - 537
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  577 aacataacataatattcacttaataataattaatcatatat 537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 8944 - 8984
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8944 aacataacataatattcacttaataataattaatcatatat 8984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 11996 - 12036
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11996 aacataacataatattcacttaataataattaatcatatat 12036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 12104 - 12143
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  12104 aacataacataatattcacttaataataa-taatcatatat 12143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 34322 - 34223
Alignment:
Q  194 cataaacatcttaaacataatcatcttaaa-ca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||| ||||||||||||||||| ||  |||||||| |||||||  ||||| |||||||||||  | ||| |||||||| |||||||||||||    
T  34322 cataaacatcttcaacataatcatcttaaaacatcatagcatcattgataataaattatcaagtaatcacttcattcaatcatcataaataacataacat 34223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 5222 - 5323
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| |||||||  || || ||| |||||||  | ||| |||||| | |||||||||||    
T  5222 caacataaacatcttcaacataatcatcttaaacatcatagcatcattgataataaaatatcaattaatcacttcattcaatcatcgtaaataacataac 5321  T
Q  289 at 290  Q
    ||    
T  5322 at 5323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 6417 - 6518
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| |||||||  || || ||| |||||||  | ||| |||||| | |||||||||||    
T  6417 caacataaacatcttcaacataatcatcttaaacatcatagcatcattgataataaaatatcaattaatcacttcattcaatcatcgtaaataacataac 6516  T
Q  289 at 290  Q
    ||    
T  6517 at 6518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 42265 - 42366
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| |||||||  || || ||||| | |||  | ||| |||||||| |||||||||||    
T  42265 caacataaacatcttcaacataatcatcttaaacatcatagcatcattgataataaaatatcaagttaccacttcattctatcatcataaataacataac 42364  T
Q  289 at 290  Q
    ||    
T  42365 at 42366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 25610 - 25582
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  25610 catcatcaagtacatttaacaactcatag 25582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 5304 - 5203
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||||||||||| ||||||| |||||||||||  |||||||| |||||||  || || |||||||||||  | ||  |||||||| |||||||||||    
T  5304 caacataaacatcttcaacataagcatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcatttaatcatcataaataacataac 5205  T
Q  289 at 290  Q
    ||    
T  5204 at 5203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 10726 - 10666
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| ||||||||||| |  ||| ||||||||||||||||||||||    
T  10726 gcatctttgataaacaattatcaagtaatcac-atattcaatcatcatcaataacataacat 10666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 19029 - 18968
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||| ||||||||| ||||||||||||   ||| ||||||||||||||||||||||    
T  19029 gcatctttgagaaacaattatcaagtaatcacagtattcaatcatcatcaataacataacat 18968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 9107 - 9186
Alignment:
Q  209 cataatca-tcttaaacaa--tagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacata 286  Q
    |||||||| ||||||||||  |||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||    
T  9107 cataatcagtcttaaacaacatagcatctttgataaacaattatcaagtaatcacagc-ttcaatcataatcaataacata 9186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 4633 - 4572
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||| | ||| |||||||| | ||| ||||||||||||||||||||||    
T  4633 gcatctttgataaacaatcatcaattaatcacatcattcaatcatcatcaataacataacat 4572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 66822 - 66762
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  66822 gcatctttgataa-caattaacaagtaatcacagcattcaatcatcatcaataacataacat 66762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 53264 - 53324
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||||    
T  53264 gcatctttgataa-caattatcaagtaatcacagcattcaatcatcatcaataacataacat 53324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 37051 - 37014
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatat 319  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  37051 aacataacataatattcacttaataataa-taatcatat 37014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 37245 - 37217
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  37245 catcatcaagtacatttaacaactcatag 37217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 66299 - 66259
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  66299 taattaacaacataaatcttcaacataagcatcttaaacat 66259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 7715 - 7653
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaac-gttcgatcatcatcaataacataacat 290  Q
    |||||||| ||||||||||| |||||||||||| |  ||| ||||||||||||||||||||||    
T  7715 gcatcttttataaacaattatcaagtaatcacatcatttcaatcatcatcaataacataacat 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 32059 - 32101
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  32059 cataattaacaacataaatcttcaacataaacatcttaaacat 32101  T

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Target: scaffold0035 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 47224 - 47123
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    |||||||||| |||| ||||||| |||||||||||  |||||||| ||||||   || || |||||||||||  | ||| |||||||| |||||||||||    
T  47224 caacataaacttcttcaacataagcatcttaaacatcatagcatcattgatattaaaatatcaagtaatcacttcattcaatcatcataaataacataac 47125  T
Q  289 at 290  Q
    ||    
T  47124 at 47123  T

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Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 81620 - 81563
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||||||||||    
T  81620 gcatctttgataaacaattatcacataatcacaac-ttcaatcatcatcaataacataa 81563  T

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Target: scaffold0013; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 3062 - 3007
Alignment:
Q  234 tttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| ||||| ||| ||| |||||||||||| |||||||||    
T  3062 tttgataaacaattaccaagaaatcaaaacattcaatcatcatcaat-acataacat 3007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 74374 - 74346
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  74374 catcatcaagtacatttaacaactcatag 74346  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 22926 - 22983
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||||||||||    
T  22926 gcatctttgataaacaattatcacataatcacaac-ttcaatcatcatcaataacataa 22983  T

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Target: scaffold1873 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 848 - 885
Alignment:
Q  164 aacaccataatcaacatcataaatcttcaacataaaca 201  Q
    |||| |||||||||||||||||||||||||||||||||    
T  848 aacatcataatcaacatcataaatcttcaacataaaca 885  T

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Target: scaffold1873; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 954 - 999
Alignment:
Q  245 attaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||| |||||||||||| | ||| ||||||||||||||||||||||    
T  954 attatcaagtaatcacagcattcaatcatcatcaataacataacat 999  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 10729 - 10690
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatatat 321  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  10729 aacataacataatat-cacttaataataattaatcatatat 10690  T

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Target: scaffold0081 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 23298 - 23338
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  23298 taattaacaacataaatcttcaacataaacatcttaaacat 23338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 38722 - 38762
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  38722 taattaacaacataaatcttcaacataaacatcttaaacat 38762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 211
Target Start/End: Original strand, 14287 - 14317
Alignment:
Q  181 cataaatcttcaacataaacatcttaaacat 211  Q
    |||||||||||||||||||||||||||||||    
T  14287 cataaatcttcaacataaacatcttaaacat 14317  T

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Target: scaffold1296 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 29 - 127
Alignment:
Q  194 cataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    |||||||||||| ||||||| |||||||||||  |||||||| |||||||  || || || ||||||||  | ||| |||||| | |||||||||||||    
T  29 cataaacatcttcaacataagcatcttaaacatcatagcatcattgataataaaatatcaggtaatcacttcattcaatcatcgtaaataacataacat 127  T

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Target: scaffold0819 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 1793 - 1828
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatct 204  Q
    |||||| |||||||||||||||||||||||||||||    
T  1793 cataattaacatcataaatcttcaacataaacatct 1828  T

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Target: scaffold0673 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 8199 - 8294
Alignment:
Q  191 caacataaacatcttaaacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    |||||||||||||||||||||      ||||||||  || ||||||||||||| ||| || |||||||||||  | ||| |||||||| |||||||||||    
T  8199 caacataaacatcttaaacat------cttaaacatcattgcatctttgataatcaaatatcaagtaatcacttcattcaatcatcataaataacataac 8292  T

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Target: scaffold0210 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 22342 - 22303
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  22342 cataattaacatcataaatcttcaacataagcatcttaaa 22303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 30234 - 30195
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  30234 cataattaacatcataaatcttcaacataagcatcttaaa 30195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 22303 - 22271
Alignment:
Q  176 aacatcataaatcttcaacataaacatcttaaa 208  Q
    ||||||||||||||||||||||| |||||||||    
T  22303 aacatcataaatcttcaacataagcatcttaaa 22271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 30195 - 30163
Alignment:
Q  176 aacatcataaatcttcaacataaacatcttaaa 208  Q
    ||||||||||||||||||||||| |||||||||    
T  30195 aacatcataaatcttcaacataagcatcttaaa 30163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 286 - 321
Target Start/End: Complemental strand, 36988 - 36953
Alignment:
Q  286 aacataatattcacttaataataattaatcatatat 321  Q
    ||||||| ||||||||||||||||||||||||||||    
T  36988 aacataacattcacttaataataattaatcatatat 36953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 6672 - 6728
Alignment:
Q  230 catctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    ||||||||||||||||||| |   |||||||||| ||| |||||||||||||||||||    
T  6672 catctttgataaacaattatcgcataatcacaac-ttcaatcatcatcaataacataa 6728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 19153 - 19114
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  19153 cataattaacatcataaatcttcaacataagcatcttaaa 19114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 55889 - 55850
Alignment:
Q  169 cataatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  55889 cataattaacatcataaatcttcaacataagcatcttaaa 55850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 77 - 134
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    |||||||||||||||||||| ||  |||||||||| ||| |||||||||||| ||||||    
T  77 gcatctttgataaacaattatcacttaatcacaac-ttcaatcatcatcaatgacataa 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 6831 - 6794
Alignment:
Q  281 aacataacataatattcacttaataataattaatcatat 319  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  6831 aacataacataatattcacttaataataa-taatcatat 6794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 7003 - 6975
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  7003 catcatcaagtacatttaacaactcatag 6975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 211
Target Start/End: Complemental strand, 8308 - 8278
Alignment:
Q  181 cataaatcttcaacataaacatcttaaacat 211  Q
    |||||||||||||||||||||||||||||||    
T  8308 cataaatcttcaacataaacatcttaaacat 8278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Complemental strand, 7609 - 7524
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||| |||||||||||  |||||||| |||||||  || || ||||||||||| || ||| | |||||| |||||||||||||    
T  7609 aacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcactacattcaaacatcataaataacataacat 7524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 27567 - 27505
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaac-gttcgatcatcatcaataacataacat 290  Q
    |||||||||||||||||||| | |||||||||| |  ||  ||||||||||||||||||||||    
T  27567 gcatctttgataaacaattatcgagtaatcacatcatttaaatcatcatcaataacataacat 27505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 6635 - 6579
Alignment:
Q  230 catctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataa 287  Q
    ||||||||||||||||||| |   |||||||||| ||| |||||||||||||||||||    
T  6635 catctttgataaacaattatcgcataatcacaac-ttcaatcatcatcaataacataa 6579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 1857 - 1917
Alignment:
Q  229 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataacat 290  Q
    ||||||||||||| |||||| |||||||||||  | ||| |||||||||||||| |||||||    
T  1857 gcatctttgataa-caattatcaagtaatcacttcattcaatcatcatcaataatataacat 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Original strand, 19291 - 19320
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  19291 aacataacataatattcacttaataataat 19320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Complemental strand, 21151 - 21122
Alignment:
Q  281 aacataacataatattcacttaataataat 310  Q
    ||||||||||||||||||||||||||||||    
T  21151 aacataacataatattcacttaataataat 21122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 21382 - 21354
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  21382 catcatcaagtacatttaacaactcatag 21354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 69409 - 69446
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaa 208  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  69409 taattaacaacataaatcttcaacataaacatcttaaa 69446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 236 - 264
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  236 catcatcaagtacatttaacaactcatag 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 5278 - 5306
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  5278 catcatcaagtacatttaacaactcatag 5306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 4157 - 4185
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  4157 catcatcaagtacatttaacaactcatag 4185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 10864 - 10836
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  10864 catcatcaagtacatttaacaactcatag 10836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 288
Target Start/End: Complemental strand, 17590 - 17507
Alignment:
Q  207 aacataatcatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatcatcaataacataac 288  Q
    ||||||| |||||||||||  |||||||| |||||||  || || |||||||||||  | ||| |||||||| |||||||||||    
T  17590 aacataaacatcttaaacatcatagcatcattgataataaaatatcaagtaatcacttcattcaatcatcataaataacataac 17507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 3356 - 3396
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  3356 taattaacaacataaatcttcaacataagcatcttaaacat 3396  T

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Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 7787 - 7827
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  7787 taattaacaacataaatcttcaacataagcatcttaaacat 7827  T

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Target: scaffold0043 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 17851 - 17891
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| ||||||||||||||||||||||||| |||||    
T  17851 taattaacaacataaatcttcaacataaacatcttgaacat 17891  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 109637 - 109665
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  109637 catcatcaagtacatttaacaactcatag 109665  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 178515 - 178555
Alignment:
Q  171 taatcaacatcataaatcttcaacataaacatcttaaacat 211  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  178515 taattaacaacataaatcttcaacataagcatcttaaacat 178555  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 224185 - 224157
Alignment:
Q  13 catcatcaagtacatttaacaactcatag 41  Q
    |||||||||||||||||||||||||||||    
T  224185 catcatcaagtacatttaacaactcatag 224157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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