View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0668_low_48 (Length: 276)

Name: NF0668_low_48
Description: NF0668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0668_low_48
NF0668_low_48
[»] chr2 (23 HSPs)
chr2 (103-238)||(771687-771822)
chr2 (106-236)||(17444117-17444247)
chr2 (103-236)||(16406084-16406217)
chr2 (103-236)||(42442940-42443073)
chr2 (103-236)||(18982499-18982632)
chr2 (103-230)||(31580815-31580942)
chr2 (103-236)||(32126267-32126400)
chr2 (103-236)||(35963645-35963777)
chr2 (106-236)||(6402885-6403015)
chr2 (105-236)||(8058424-8058555)
chr2 (105-236)||(45419537-45419668)
chr2 (106-236)||(41250714-41250844)
chr2 (103-236)||(2286862-2286988)
chr2 (106-237)||(7071611-7071742)
chr2 (103-232)||(26238573-26238703)
chr2 (103-184)||(4554381-4554463)
chr2 (105-182)||(26161814-26161891)
chr2 (105-152)||(12755937-12755984)
chr2 (103-153)||(26656286-26656336)
chr2 (103-145)||(17035840-17035882)
chr2 (103-145)||(17090348-17090390)
chr2 (198-236)||(26161876-26161914)
chr2 (167-236)||(12755981-12756050)
[»] chr5 (22 HSPs)
chr5 (103-236)||(39656606-39656739)
chr5 (103-236)||(16332979-16333112)
chr5 (103-236)||(19986399-19986532)
chr5 (106-236)||(36292702-36292832)
chr5 (103-232)||(16155850-16155979)
chr5 (103-236)||(10036862-10036995)
chr5 (103-236)||(13818932-13819065)
chr5 (106-235)||(17331078-17331207)
chr5 (106-236)||(39435652-39435785)
chr5 (106-236)||(26282399-26282529)
chr5 (105-236)||(12277936-12278067)
chr5 (105-236)||(31681321-31681452)
chr5 (105-236)||(33431275-33431406)
chr5 (103-236)||(36292309-36292444)
chr5 (106-236)||(43069797-43069931)
chr5 (103-221)||(1775457-1775575)
chr5 (103-236)||(31500799-31500929)
chr5 (105-228)||(28801837-28801961)
chr5 (103-194)||(37255629-37255720)
chr5 (160-232)||(15959080-15959153)
chr5 (163-222)||(192764-192823)
chr5 (103-153)||(1280761-1280811)
[»] chr4 (40 HSPs)
chr4 (103-236)||(44157579-44157712)
chr4 (103-236)||(13390526-13390659)
chr4 (103-236)||(40530040-40530173)
chr4 (104-236)||(28876394-28876526)
chr4 (106-237)||(50204169-50204300)
chr4 (106-236)||(25931709-25931839)
chr4 (103-236)||(30076730-30076864)
chr4 (104-236)||(17510319-17510451)
chr4 (103-234)||(13398639-13398770)
chr4 (103-230)||(37577711-37577838)
chr4 (105-236)||(3291978-3292109)
chr4 (105-236)||(33135525-33135656)
chr4 (103-232)||(10351975-10352105)
chr4 (103-236)||(36381428-36381560)
chr4 (103-236)||(42332852-42332985)
chr4 (103-236)||(43142664-43142797)
chr4 (105-236)||(6689318-6689449)
chr4 (105-236)||(35546906-35547037)
chr4 (103-236)||(1818610-1818743)
chr4 (106-236)||(13013144-13013274)
chr4 (106-236)||(47501729-47501859)
chr4 (103-236)||(30215825-30215958)
chr4 (106-236)||(26438360-26438490)
chr4 (106-236)||(34406365-34406495)
chr4 (106-236)||(43356860-43356990)
chr4 (103-202)||(29319432-29319531)
chr4 (105-227)||(29995089-29995206)
chr4 (103-236)||(7769517-7769644)
chr4 (106-220)||(30110931-30111046)
chr4 (106-223)||(20130197-20130314)
chr4 (103-182)||(26449702-26449781)
chr4 (103-168)||(6236482-6236547)
chr4 (103-213)||(48130989-48131099)
chr4 (118-182)||(48990280-48990344)
chr4 (198-236)||(26449679-26449717)
chr4 (167-232)||(48130938-48131004)
chr4 (198-236)||(48990257-48990295)
chr4 (201-236)||(25931665-25931700)
chr4 (103-151)||(42843892-42843940)
chr4 (106-153)||(8897874-8897921)
[»] chr7 (18 HSPs)
chr7 (103-236)||(5556417-5556550)
chr7 (103-236)||(36631771-36631904)
chr7 (103-236)||(7003581-7003714)
chr7 (103-236)||(7049452-7049585)
chr7 (103-236)||(3113201-3113334)
chr7 (105-233)||(8395082-8395210)
chr7 (105-232)||(34468415-34468542)
chr7 (103-236)||(26625699-26625832)
chr7 (103-236)||(38637461-38637594)
chr7 (106-236)||(43183551-43183681)
chr7 (105-236)||(37001320-37001451)
chr7 (103-236)||(8866810-8866943)
chr7 (106-233)||(14775677-14775804)
chr7 (106-233)||(15226130-15226257)
chr7 (106-236)||(36659123-36659245)
chr7 (104-170)||(33686553-33686619)
chr7 (129-177)||(11019694-11019742)
chr7 (103-153)||(10224071-10224121)
[»] chr6 (8 HSPs)
chr6 (103-236)||(34947905-34948038)
chr6 (103-238)||(29744222-29744358)
chr6 (106-236)||(13838754-13838884)
chr6 (103-236)||(33228430-33228564)
chr6 (105-236)||(28997684-28997815)
chr6 (106-236)||(399573-399703)
chr6 (103-232)||(31028033-31028163)
chr6 (135-236)||(34253087-34253186)
[»] chr1 (15 HSPs)
chr1 (103-236)||(23313949-23314082)
chr1 (103-236)||(11957437-11957570)
chr1 (103-232)||(15209367-15209497)
chr1 (106-236)||(17446248-17446378)
chr1 (105-236)||(32981139-32981270)
chr1 (103-236)||(7434375-7434510)
chr1 (105-236)||(42310019-42310153)
chr1 (106-232)||(41971337-41971464)
chr1 (103-184)||(35908563-35908644)
chr1 (130-230)||(33490340-33490441)
chr1 (103-182)||(3829961-3830040)
chr1 (198-236)||(3829938-3829976)
chr1 (103-153)||(41753132-41753182)
chr1 (103-153)||(25017566-25017616)
chr1 (103-153)||(51053149-51053199)
[»] scaffold0154 (1 HSPs)
scaffold0154 (103-236)||(32170-32303)
[»] chr3 (20 HSPs)
chr3 (110-236)||(34083207-34083333)
chr3 (105-231)||(35514956-35515082)
chr3 (106-236)||(19391102-19391231)
chr3 (105-236)||(45183935-45184066)
chr3 (103-236)||(40080820-40080953)
chr3 (105-228)||(6929975-6930098)
chr3 (106-236)||(6268503-6268633)
chr3 (103-236)||(11017349-11017482)
chr3 (108-236)||(22967527-22967655)
chr3 (106-236)||(39772746-39772876)
chr3 (103-236)||(19564595-19564729)
chr3 (125-236)||(45336812-45336924)
chr3 (106-232)||(5136252-5136377)
chr3 (106-212)||(1185591-1185698)
chr3 (143-236)||(33041905-33041998)
chr3 (104-182)||(27936159-27936238)
chr3 (103-153)||(43137306-43137356)
chr3 (174-228)||(6502718-6502772)
chr3 (198-236)||(27936136-27936174)
chr3 (103-153)||(37381814-37381864)
[»] chr8 (26 HSPs)
chr8 (103-236)||(36409439-36409572)
chr8 (103-236)||(34135884-34136017)
chr8 (109-236)||(3647876-3648003)
chr8 (103-232)||(40469946-40470076)
chr8 (106-236)||(24019472-24019602)
chr8 (106-236)||(28524154-28524284)
chr8 (106-236)||(39915470-39915600)
chr8 (105-238)||(4404961-4405094)
chr8 (103-228)||(29727463-29727588)
chr8 (106-233)||(15839231-15839362)
chr8 (103-236)||(16787104-16787237)
chr8 (103-236)||(7278981-7279115)
chr8 (106-236)||(23403023-23403153)
chr8 (160-236)||(9878175-9878251)
chr8 (106-228)||(3436196-3436319)
chr8 (106-182)||(42231915-42231991)
chr8 (103-162)||(27046841-27046900)
chr8 (106-165)||(29632413-29632472)
chr8 (198-236)||(42231892-42231930)
chr8 (133-182)||(2727959-2728008)
chr8 (198-228)||(2727993-2728023)
chr8 (103-153)||(21958692-21958742)
chr8 (103-153)||(32342996-32343046)
chr8 (103-153)||(32355483-32355533)
chr8 (103-153)||(32359602-32359652)
chr8 (103-153)||(32372133-32372183)
[»] scaffold0069 (1 HSPs)
scaffold0069 (106-236)||(18515-18644)
[»] scaffold0002 (1 HSPs)
scaffold0002 (106-236)||(479538-479668)
[»] scaffold0015 (1 HSPs)
scaffold0015 (103-153)||(214106-214156)


Alignment Details
Target: chr2 (Bit Score: 116; Significance: 5e-59; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 103 - 238
Target Start/End: Complemental strand, 771822 - 771687
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||    
T  771822 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccatgtaatataagtgaagtcggaaaatt 771723  T
Q  203 gaccctgtaattaaataacatgtattctgaccatat 238  Q
    |||| |||||||||||||||||||||||||||||||    
T  771722 gaccatgtaattaaataacatgtattctgaccatat 771687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 17444117 - 17444247
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| ||||||||||    
T  17444117 aaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattgac 17444216  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  17444217 cctgtaattaaataacatgtattctgaccat 17444247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 16406217 - 16406084
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||    
T  16406217 tcgaaataaaagaggtttatcattttgttaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 16406118  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
     ||| |||||||||||||||||||||||||||||    
T  16406117 caccatgtaattaaataacatgtattctgaccat 16406084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 42443073 - 42442940
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||||     
T  42443073 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatg 42442974  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||| ||||||||||||||||||||| |||||||    
T  42442973 gaccatgtaattaaataacatgtattatgaccat 42442940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 18982632 - 18982499
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| |||| ||||||| | ||||||| |||||||    
T  18982632 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatatggttattaattgaaatttaccacgtaatatacgtgaagtctgaaaatt 18982533  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
     |||||||||||||||||||||||||||||||||    
T  18982532 taccctgtaattaaataacatgtattctgaccat 18982499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 31580815 - 31580942
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  31580815 tcgaaataaaggaggtttatcatttcgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 31580914  T
Q  203 gaccctgtaattaaataacatgtattct 230  Q
    | ||||||||||||||||||||||||||    
T  31580915 gtccctgtaattaaataacatgtattct 31580942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 32126267 - 32126400
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| || ||||||| | ||||||| |||||||    
T  32126267 tcgaaataaaagagatttatcattttgtcaacaaaagtacagtttaaaatagggttattaattgaaattgatcacgtaatatacgtgaagtctgaaaatt 32126366  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||| ||||||||||||||||||||||||||||    
T  32126367 gaccccgtaattaaataacatgtattctgaccat 32126400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 35963777 - 35963645
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||| |||||||||||||||||| | ||||||| | ||||||| |||||||    
T  35963777 tcgaaataaaagaggtt-atcattttgtcaacaaaagtacaacttaaaatagggttattaattgaaattgacaacgtaatatacgtgaagtctgaaaatt 35963679  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||| |||||    
T  35963678 gaccctgtaattaaataacatgtattcttaccat 35963645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 6402885 - 6403015
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  6402885 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 6402984  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  6402985 cctgtaattaaataacatgtattctgaccat 6403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 8058424 - 8058555
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||   ||||||| ||||||||     
T  8058424 gaaataaaagaggtttatcattttgtcaacaatagtacaatttaaaataggattattaattgaaattgatcatgtaatatatgtgaagtctgaaaattgg 8058523  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
     | ||||||||||||||||||||| |||||||    
T  8058524 tcttgtaattaaataacatgtattttgaccat 8058555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 45419668 - 45419537
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   |||||||  |||||||     
T  45419668 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctaaaaattgg 45419569  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    || ||||||||||||||||||||| |||||||    
T  45419568 ccatgtaattaaataacatgtattttgaccat 45419537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 41250714 - 41250844
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| | |||||||||||||| ||||||||||||||| |||| ||||||| | ||||||| ||||||||||    
T  41250714 aaataaatgaagtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaattaaccacgtaatatacgtgaagtctgaaaattgac 41250813  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    | |||||||||||||||||||||||||||||    
T  41250814 catgtaattaaataacatgtattctgaccat 41250844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 2286988 - 2286862
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||        ||||||  |||||||    
T  2286988 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgt-------gtgaagtatgaaaatt 2286896  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||||||||||||||||||||||    
T  2286895 gaccctgtaattaaataacatgtattctgaccat 2286862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 106 - 237
Target Start/End: Original strand, 7071611 - 7071742
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaattga 204  Q
    ||||||||||||||  |||||||||||||| || ||||||||||||||  |||||||||||||||||||||| |||||| | ||||||| | ||||||||    
T  7071611 aaataaaagaggttcctcattttgtcaacagaagtacaatttaaaataaatttattaattgaaattgaccat-taatatacgtgaagtctgaaaaattga 7071709  T
Q  205 ccctgtaattaaataacatgtattctgaccata 237  Q
    |||| ||||||||||||||||||||||| ||||    
T  7071710 ccctataattaaataacatgtattctgaacata 7071742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 232
Target Start/End: Complemental strand, 26238703 - 26238573
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaa-t 201  Q
    |||||||||||||||||  |||||| ||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |  |||||  ||||| |    
T  26238703 tcgaaataaaagaggttcctcatttcgtcaagaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacacgaagtttgaaaatt 26238604  T
Q  202 tgaccctgtaattaaataacatgtattctga 232  Q
    ||||| | |||||||||||||||||||||||    
T  26238603 tgaccatataattaaataacatgtattctga 26238573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 4554381 - 4554463
Alignment:
Q  103 tcgaaataaaaga-ggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatat 184  Q
    ||||||||||| | ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  4554381 tcgaaataaaataaggtttctcattttgtcaacaaaaatacaatttaaaatatggttattaattgaaattgaccatgtaatat 4554463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 26161814 - 26161891
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaat 182  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||| ||| ||||||    
T  26161814 gaaataaaataggtttatcattttgtcaataaaagtacaatttaaaatagggttattaattgaaattcaccctgtaat 26161891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 12755937 - 12755984
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaat 152  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  12755937 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaat 12755984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 26656286 - 26656336
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  26656286 tcgaaataaaagaggtatgtcattttgtcaacaaaagtacaatttaaaata 26656336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 17035840 - 17035882
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaat 145  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  17035840 tcgaaataaaagaggtttctcattttgtcaacaaaagtacaat 17035882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 17090348 - 17090390
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaat 145  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  17090348 tcgaaataaaagaggtttctcattttgtcaacaaaagtacaat 17090390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 26161876 - 26161914
Alignment:
Q  198 aaattgaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26161876 aaattcaccctgtaattaaataacatgtattctgaccat 26161914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 12755981 - 12756050
Alignment:
Q  167 aaattgaccatgtaatattcttgaagtcggaaaattgaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||| ||||||    |||||| |||||||  || ||||||||||||||||||||| |||||||    
T  12755981 aaattgaccatataatatatgcgaagtctgaaaattagccatgtaattaaataacatgtattttgaccat 12756050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 39656606 - 39656739
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  39656606 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 39656705  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||| |||||    
T  39656706 gaccctgtaattaaataacatgtattctaaccat 39656739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 16332979 - 16333112
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  16332979 tcgaaataaaagaggtttatcattttgtcaacaaaattacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 16333078  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||| |||||||    
T  16333079 gaccctgtaattaaataacatgtattatgaccat 16333112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 19986532 - 19986399
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  19986532 tcgaaataaaagaggtttatcattttgtcaacaaacgtacaatttaaaataggattattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 19986433  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||||||||||||||||||||||    
T  19986432 gaccctgtaattaaataacatgtattctgaccat 19986399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 36292702 - 36292832
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||| ||||||||||    
T  36292702 aaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaaccacgtaatatacttgaagtctgaaaattgac 36292801  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  36292802 cctgtaattaaataacatgtattctgaccat 36292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 232
Target Start/End: Complemental strand, 16155979 - 16155850
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||| | ||||||| |||||||    
T  16155979 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacataatatacgtgaagtctgaaaatt 16155880  T
Q  203 gaccctgtaattaaataacatgtattctga 232  Q
    ||||||||||||||||||||||||||||||    
T  16155879 gaccctgtaattaaataacatgtattctga 16155850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 10036995 - 10036862
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||    ||||||| |||||||    
T  10036995 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatacatgtgaagtctgaaaatt 10036896  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
     |||||||||||||||||||||||||||||||||    
T  10036895 caccctgtaattaaataacatgtattctgaccat 10036862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 13819065 - 13818932
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| | ||||||| | |||||||  ||||||    
T  13819065 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgactacgtaatatacgtgaagtctaaaaatt 13818966  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||| ||||||||||||||||||||||| |||||    
T  13818965 gaccatgtaattaaataacatgtattctaaccat 13818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 17331078 - 17331207
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||| ||||||||||    
T  17331078 aaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgac 17331177  T
Q  206 cctgtaattaaataacatgtattctgacca 235  Q
     |||||||||||||||||||||| ||||||    
T  17331178 tctgtaattaaataacatgtattttgacca 17331207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 39435785 - 39435652
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||| |    
T  39435785 aaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattgtc 39435686  T
Q  206 cctgtaattaaat---aacatgtattctgaccat 236  Q
    |||||||||||||   ||||||||||||||||||    
T  39435685 cctgtaattaaataacaacatgtattctgaccat 39435652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 26282399 - 26282529
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  26282399 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 26282498  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  26282499 cctgtaattaaataacatgtattctgaccat 26282529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 12277936 - 12278067
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||| ||||||||     
T  12277936 gaaataaaagaggattatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 12278035  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    || ||||||||||||||||||||| |||||||    
T  12278036 ccttgtaattaaataacatgtattttgaccat 12278067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 31681452 - 31681321
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||||||| ||||||||| ||||||||||||||||||   ||||||| ||||||||     
T  31681452 gaaataaaagaggtttatcattttgtcaataaaactataatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 31681353  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    || ||||||||||||||||||||| |||||||    
T  31681352 ccttgtaattaaataacatgtattttgaccat 31681321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 33431406 - 33431275
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||||||| ||||||||| ||||||||||||||||||   ||||||| ||||||||     
T  33431406 gaaataaaagaggtttatcattttgtcaataaaactataatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 33431307  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    || ||||||||||||||||||||| |||||||    
T  33431306 ccttgtaattaaataacatgtattttgaccat 33431275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 36292444 - 36292309
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgacc-atgtaatattcttgaagtcggaaaat 201  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||||| ||||||||| | ||||||  ||||||    
T  36292444 tcgaaataaaagaggtttatcattttatcaacaaaagtacaatttaaaataaggttattaattgaaattgaccaatgtaatatacgtgaagtttgaaaat 36292345  T
Q  202 tgaccctgt-aattaaataacatgtattctgaccat 236  Q
    ||||||||| |||||||| |||||||||||||||||    
T  36292344 tgaccctgtaaattaaatcacatgtattctgaccat 36292309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 43069931 - 43069797
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcg---gaaaatt 202  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||||   |||||||    
T  43069931 aaataaaagaggtttatcatttagtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtcgtctgaaaatt 43069832  T
Q  203 gaccctgt-aattaaataacatgtattctgaccat 236  Q
    |||| ||| |||||||| |||| ||||||||||||    
T  43069831 gaccttgtaaattaaatcacatatattctgaccat 43069797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 1775457 - 1775575
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||| | ||||| |||||||||||||| ||||||| | ||||||| |||||||    
T  1775457 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatatggttattgattgaaattgaccacgtaatatacgtgaagtctgaaaatt 1775556  T
Q  203 gaccctgtaattaaataac 221  Q
    || ||||||||||||||||    
T  1775557 gaacctgtaattaaataac 1775575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 31500799 - 31500929
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||| |||||| |||||||||||||||||||   || |||||||||||||||| | |||||||||| ||||||||||||||| | ||||||| |||||||    
T  31500799 tcgatataaaataggtttatcattttgtcaa---aagtacaatttaaaataggataattaattgaagttgaccatgtaatatacgtgaagtctgaaaatt 31500895  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | |||||||||||||||||||||| |||||||||    
T  31500896 ggccctgtaattaaataacatgtactctgaccat 31500929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 28801961 - 28801837
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaattg 203  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||| || |||||||||||||| || ||||||| | ||||||| | |||||||    
T  28801961 gaaataaaagaggttcctcattttgtcaacaaaagtacaatttaaaatagggtttttaattgaaattgatcacgtaatatacgtgaagtctgaaaaattg 28801862  T
Q  204 accctgtaattaaataacatgtatt 228  Q
    ||| |||||||||||||||||||||    
T  28801861 accttgtaattaaataacatgtatt 28801837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 37255720 - 37255629
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc 194  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| | |||||||    
T  37255720 tcgaaataaaagaggtttatcattttgtcaataaaaatacaatttaaaataggattattaattaaaattgaccatgtaatatacgtgaagtc 37255629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 15959080 - 15959153
Alignment:
Q  160 ttaattgaaattgaccatgtaatattcttgaagtcggaaaa-ttgaccctgtaattaaataacatgtattctga 232  Q
    ||||||||||||||||||||||||| |  |||||| ||||| || ||||||||||||||||| |||||||||||    
T  15959080 ttaattgaaattgaccatgtaatatacgcgaagtctgaaaaattaaccctgtaattaaataatatgtattctga 15959153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 192823 - 192764
Alignment:
Q  163 attgaaattgaccatgtaatattcttgaagtcggaaaattgaccctgtaattaaataaca 222  Q
    ||||||||||||| |||||||| | | ||||| ||||||| |||||||||||||||||||    
T  192823 attgaaattgaccttgtaatatacgtaaagtctgaaaattaaccctgtaattaaataaca 192764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 1280811 - 1280761
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    ||||||||||||||| |  | ||||||||||||||| ||||||||||||||    
T  1280811 tcgaaataaaagaggctcgtaattttgtcaacaaaagtacaatttaaaata 1280761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 44157712 - 44157579
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| | ||||||| |||||||    
T  44157712 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgatcatgtaatatgcgtgaagtctgaaaatt 44157613  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||||||||||||||||||||||    
T  44157612 gaccctgtaattaaataacatgtattctgaccat 44157579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 13390526 - 13390659
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||  |||||||    
T  13390526 tcgaaataaaagaggtttatcattttatcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtttgaaaatt 13390625  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | ||||||||||||||||||||||||||||||||    
T  13390626 ggccctgtaattaaataacatgtattctgaccat 13390659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 40530173 - 40530040
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  40530173 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 40530074  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||| |||||||    
T  40530073 gaccctgtaattaaataacatgtattatgaccat 40530040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 28876394 - 28876526
Alignment:
Q  104 cgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattg 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||||||    
T  28876394 cgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattg 28876493  T
Q  204 accctgtaattaaataacatgtattctgaccat 236  Q
    ||| |||||||||||||||| |||| |||||||    
T  28876494 accttgtaattaaataacatatattatgaccat 28876526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 106 - 237
Target Start/End: Original strand, 50204169 - 50204300
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||| |    
T  50204169 aaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattggc 50204268  T
Q  206 cctgtaattaaataacatgtattctgaccata 237  Q
    ||||||||||||||||| || |||||||||||    
T  50204269 cctgtaattaaataacaggttttctgaccata 50204300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 25931839 - 25931709
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||||| |||||||||||||||||||| ||||||| | ||||||| ||||||||||    
T  25931839 aaataaaagaggtttatcattttgttaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaatatacatgaagtctgaaaattgac 25931740  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  25931739 cctgtaattaaataacatgtattctgaccat 25931709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 30076730 - 30076864
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||    
T  30076730 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 30076829  T
Q  203 gaccctgt-aattaaataacatgtattctgaccat 236  Q
    |||| ||| |||||||| |||||||||||||||||    
T  30076830 gaccttgtaaattaaatcacatgtattctgaccat 30076864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 17510319 - 17510451
Alignment:
Q  104 cgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattg 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||||||| | ||||||| ||||||||    
T  17510319 cgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataaggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattg 17510418  T
Q  204 accctgtaattaaataacatgtattctgaccat 236  Q
    ||| ||||||||||||| |||||||||||||||    
T  17510419 accttgtaattaaataatatgtattctgaccat 17510451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 13398639 - 13398770
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||| | ||||||| |||||||    
T  13398639 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattatcaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 13398738  T
Q  203 gaccctgtaattaaataacatgtattctgacc 234  Q
    | | ||||||||||||||||||||||| ||||    
T  13398739 ggctctgtaattaaataacatgtattcggacc 13398770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 103 - 230
Target Start/End: Complemental strand, 37577838 - 37577711
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| | ||||||| |||||||    
T  37577838 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaattaggattattaattgaaattgatcatgtaatatacatgaagtctgaaaatt 37577739  T
Q  203 gaccctgtaattaaataacatgtattct 230  Q
     ||| |||||||||||||||||||||||    
T  37577738 aaccttgtaattaaataacatgtattct 37577711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 3291978 - 3292109
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||| ||||||||     
T  3291978 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 3292077  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||| |||||||    
T  3292078 ccctgtaattaaataacatgtattttgaccat 3292109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 33135525 - 33135656
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||   ||||||| ||||||||     
T  33135525 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatatgtgaagtctgaaaattgg 33135624  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
     | ||||||||||||||||||||| |||||||    
T  33135625 tcatgtaattaaataacatgtattttgaccat 33135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 10351975 - 10352105
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||    
T  10351975 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacatgaagtctgaaaatt 10352074  T
Q  203 gaccctgt-aattaaataacatgtattctga 232  Q
    |||| ||| ||||||||  ||||||||||||    
T  10352075 gaccttgtaaattaaatcgcatgtattctga 10352105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 36381428 - 36381560
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||| ||||||| | ||||||| |||||||    
T  36381428 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattaaaattgaccacgtaatatacgtgaagtctgaaaatt 36381527  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    || | |||||||||||||||||||||||||||||    
T  36381528 ga-cttgtaattaaataacatgtattctgaccat 36381560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 42332852 - 42332985
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||| |||||||    
T  42332852 tcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 42332951  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | |||||||||||||||||||||||| |||||||    
T  42332952 ggccctgtaattaaataacatgtattttgaccat 42332985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 43142664 - 43142797
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||| |||||||    
T  43142664 tcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 43142763  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | |||||||||||||||||||||||| |||||||    
T  43142764 ggccctgtaattaaataacatgtattttgaccat 43142797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 6689318 - 6689449
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   | ||||| ||||||||     
T  6689318 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtaaagtctgaaaattgg 6689417  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||| |||||||    
T  6689418 ccctgtaattaaataacatgtattttgaccat 6689449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 35547037 - 35546906
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||| ||||||||     
T  35547037 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 35546938  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    || ||||||||||||||||||||| |||||||    
T  35546937 ccatgtaattaaataacatgtattttgaccat 35546906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 1818743 - 1818610
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||    
T  1818743 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagg-ttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 1818645  T
Q  203 gaccctgta-attaaataacatgtattctgaccat 236  Q
     ||| |||| || |||| |||||||||||||||||    
T  1818644 aaccttgtatataaaatcacatgtattctgaccat 1818610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 13013274 - 13013144
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  13013274 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 13013175  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  13013174 cctgtaattaaataacatgtattctgaccat 13013144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 47501859 - 47501729
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  47501859 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 47501760  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  47501759 cctgtaattaaataacatgtattctgaccat 47501729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 30215825 - 30215958
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||| ||||||||||||||||||   ||||||| |||||||    
T  30215825 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttcaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 30215924  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | || ||||||||||||||||||||| |||||||    
T  30215925 ggccttgtaattaaataacatgtattttgaccat 30215958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 26438360 - 26438490
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| |||||||||  ||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  26438360 aaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 26438459  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  26438460 cctgtaattaaataacatgtattctgaccat 26438490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 34406365 - 34406495
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| |||||||||  ||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  34406365 aaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 34406464  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||| |||||||||||||||    
T  34406465 cctgtaattaaataatatgtattctgaccat 34406495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 43356990 - 43356860
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| |||||||||  ||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  43356990 aaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 43356891  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||| |||||||||||||||    
T  43356890 cctgtaattaaataatatgtattctgaccat 43356860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 29319432 - 29319531
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| | ||||||| | ||||||| |||||||    
T  29319432 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgacaacgtaatatacctgaagtctgaaaatt 29319531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 29995089 - 29995206
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||||||||      ||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||||    
T  29995089 gaaataaaagaggtttatcattttgtcaacaaaa------tttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattga 29995182  T
Q  205 ccctgt-aattaaataacatgtat 227  Q
    ||| || |||||||| ||||||||    
T  29995183 ccccgtaaattaaatcacatgtat 29995206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 7769644 - 7769517
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||| ||||||||||||||||||   |||      ||||||    
T  7769644 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaatagaattattaattaaaattgaccatgtaatatatgtga------aaaatt 7769551  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | || ||||||||||||||||||||| |||||||    
T  7769550 ggccatgtaattaaataacatgtattttgaccat 7769517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 30111046 - 30110931
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaattga 204  Q
    |||||||| |||||  | ||||||||||||||| |||||||||||||| | ||||| |||||||||||||||||||||| | ||||||| | ||||||||    
T  30111046 aaataaaataggttctttattttgtcaacaaaagtacaatttaaaatatggttattgattgaaattgaccatgtaatatacgtgaagtctgaaaaattga 30110947  T
Q  205 ccctgtaattaaataa 220  Q
    ||||||||||||||||    
T  30110946 ccctgtaattaaataa 30110931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 20130314 - 20130197
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| || | ||||||| | ||||||| ||||||||||    
T  20130314 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaactacgtaatatacgtgaagtctgaaaattgac 20130215  T
Q  206 cctgtaattaaataacat 223  Q
    |||||| |||||| ||||    
T  20130214 cctgtagttaaatgacat 20130197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 26449781 - 26449702
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaat 182  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||    
T  26449781 tcgaaataaaataggtttatcattttgtcaacaaaagtacaatgtaaaataggattattaattgaaattgaccctgtaat 26449702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 6236547 - 6236482
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaa 168  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  6236547 tcgaaataaaagaggtttatcattttatcaacaaaaatacaatttaaaatacggttattaattgaa 6236482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 213
Target Start/End: Complemental strand, 48131099 - 48130989
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaat 201  Q
    ||||||||||| |||||  || |||||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||| | | ||||| | |||||    
T  48131099 tcgaaataaaaaaggttcctccttttgtcaacaaaagtacattttaaa-tagggttattaattgaaattgaccatgtaatatacgttaagtctgaaaaat 48131001  T
Q  202 tgaccctgtaat 213  Q
    ||||| ||||||    
T  48131000 tgaccatgtaat 48130989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 48990344 - 48990280
Alignment:
Q  118 tttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaat 182  Q
    |||||||||||||||| |||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  48990344 tttatcattttgtcaataaaagtacaatttaaaatagagttattaattgaaattgaccctgtaat 48990280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 26449717 - 26449679
Alignment:
Q  198 aaattgaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26449717 aaattgaccctgtaattaaataacatgtattctgaccat 26449679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 48131004 - 48130938
Alignment:
Q  167 aaattgaccatgtaatattcttgaagtcggaaaa-ttgaccctgtaattaaataacatgtattctga 232  Q
    |||||||||||||||||| |  |||||| ||||| |||||| |||||||||||||||||||||||||    
T  48131004 aaattgaccatgtaatatacgcgaagtctgaaaaattgaccatgtaattaaataacatgtattctga 48130938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 48990295 - 48990257
Alignment:
Q  198 aaattgaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48990295 aaattgaccctgtaattaaataacatgtattctgaccat 48990257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 25931700 - 25931665
Alignment:
Q  201 ttgaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  25931700 ttgaccctgtaattaaataacatgtattctgaccat 25931665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 42843940 - 42843892
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaa 151  Q
    |||||||||||||||||  ||||||| ||||||||| ||||||||||||    
T  42843940 tcgaaataaaagaggttcgtcattttttcaacaaaagtacaatttaaaa 42843892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 8897874 - 8897921
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    ||||||||||||||  ||||||||||||||||| |||||||| |||||    
T  8897874 aaataaaagaggttcgtcattttgtcaacaaaagtacaatttgaaata 8897921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 5556550 - 5556417
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  5556550 tcgaaataaaataggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 5556451  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||||||||||||||||||||||    
T  5556450 gaccctgtaattaaataacatgtattctgaccat 5556417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 36631904 - 36631771
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  36631904 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 36631805  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||||||||||||||||||||||    
T  36631804 gaccctgtaattaaataacatgtattctgaccat 36631771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 7003714 - 7003581
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||| | ||||||| |||||||    
T  7003714 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatatgattattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 7003615  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||| |||||||||||||| ||||||||||||    
T  7003614 gaccctataattaaataacatatattctgaccat 7003581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 7049585 - 7049452
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||| | ||||||| |||||||    
T  7049585 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatatgattattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 7049486  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||| |||||||||||||| ||||||||||||    
T  7049485 gaccctataattaaataacatatattctgaccat 7049452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 3113201 - 3113334
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| | ||||||| | ||||||| |||||||    
T  3113201 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgacaacgtaatatacgtgaagtctgaaaatt 3113300  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||| |||||||||||||| |||||||    
T  3113301 gaccctgtaatcaaataacatgtattttgaccat 3113334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 8395210 - 8395082
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||| | ||||||| |||||||||    
T  8395210 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaataggtttattaattgaaattgaccacgcaatatacgtgaagtctgaaaattga 8395111  T
Q  205 ccctgtaattaaataacatgtattctgac 233  Q
    || ||||||||||||||||||||||||||    
T  8395110 ccatgtaattaaataacatgtattctgac 8395082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 105 - 232
Target Start/End: Original strand, 34468415 - 34468542
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||| | ||||||| |||||||||    
T  34468415 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgatcacgtaatatacgtgaagtctgaaaattga 34468514  T
Q  205 ccctgtaattaaataacatgtattctga 232  Q
    || |||||||||||||||||||||||||    
T  34468515 ccttgtaattaaataacatgtattctga 34468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 26625832 - 26625699
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||| ||||||||||||||||||   ||||||| |||||||    
T  26625832 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttcaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 26625733  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | |||||||||||||||||||||||| |||||||    
T  26625732 ggccctgtaattaaataacatgtattttgaccat 26625699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 38637461 - 38637594
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| | ||||||||||||||||||   ||||||| |||||||    
T  38637461 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattattaaataaaattgaccatgtaatatatgtgaagtctgaaaatt 38637560  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | |||||||||||||||||||||||| |||||||    
T  38637561 ggccctgtaattaaataacatgtattttgaccat 38637594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 43183551 - 43183681
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||| |||||||| |    
T  43183551 aaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattggc 43183650  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    | ||||||||||||||||||||| |||||||    
T  43183651 catgtaattaaataacatgtattttgaccat 43183681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 37001320 - 37001451
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| |||||||| || ||||||   ||||||| ||||||||     
T  37001320 gaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgacaatataatatatgtgaagtctgaaaattgg 37001419  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||| |||||||    
T  37001420 ccctgtaattaaataacatgtattttgaccat 37001451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 8866810 - 8866943
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||||||||| |||||||||| |||||||   ||||||| |||||||    
T  8866810 tcgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataagattattaattaaaattgaccacgtaatatatgtgaagtctgaaaatt 8866909  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | | |||||||||||||||||||||| |||||||    
T  8866910 ggctctgtaattaaataacatgtattttgaccat 8866943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 14775677 - 14775804
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| | || ||||||| | ||||||| |||||||||     
T  14775677 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaatcacgtaatatacgtgaagtctgaaaattgat 14775776  T
Q  206 cctgtaattaaataacatgtattctgac 233  Q
    ||||||||||||||||||| ||||||||    
T  14775777 cctgtaattaaataacatgcattctgac 14775804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 15226130 - 15226257
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| | || ||||||| | ||||||| |||||||||     
T  15226130 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaatcacgtaatatacgtgaagtctgaaaattgat 15226229  T
Q  206 cctgtaattaaataacatgtattctgac 233  Q
    ||||||||||||||||||| ||||||||    
T  15226230 cctgtaattaaataacatgcattctgac 15226257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 36659245 - 36659123
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||        |||||||||||||| | |||||||  | ||||| |    
T  36659245 aaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattatta--------tgaccatgtaatatacgtgaagtctcacaattggc 36659154  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  36659153 cctgtaattaaataacatgtattctgaccat 36659123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 33686619 - 33686553
Alignment:
Q  104 cgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaat 170  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  33686619 cgaaataaaataggtttatcattttgtcaacaaaagtacaatttaaaatatggttattaattgaaat 33686553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 11019694 - 11019742
Alignment:
Q  129 gtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccat 177  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||    
T  11019694 gtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccat 11019742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 10224121 - 10224071
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||||||||||||  |||||||||||| ||||||||||||| |||||    
T  10224121 tcgaaataaaagaggttcttcattttgtcaataaaaatacaatttgaaata 10224071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 34947905 - 34948038
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  34947905 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 34948004  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||| |||||||||||||||||||||||||||||    
T  34948005 gaccatgtaattaaataacatgtattctgaccat 34948038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 103 - 238
Target Start/End: Complemental strand, 29744358 - 29744222
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||| | ||||||| |||||||    
T  29744358 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgagattgaccatgtaatatacgtgaagtctgaaaatt 29744259  T
Q  203 gaccctgt-aattaaataacatgtattctgaccatat 238  Q
    |||| ||| |||||||| |||||||||||||||||||    
T  29744258 gaccttgtaaattaaatcacatgtattctgaccatat 29744222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 13838884 - 13838754
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| ||||||||||    
T  13838884 aaataaaagagatttatcattttatcaacaaaaatacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattgac 13838785  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    | ||||||||||||||||||||||| |||||    
T  13838784 catgtaattaaataacatgtattctaaccat 13838754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 33228430 - 33228564
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||    
T  33228430 tcgaaataaaagatgtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 33228529  T
Q  203 gaccctgt-aattaaataacatgtattctgaccat 236  Q
    |||| ||| |||||||| |||||||||||||||||    
T  33228530 gaccttgtaaattaaatcacatgtattctgaccat 33228564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 28997815 - 28997684
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||||||| ||||||||| ||||||||||||||||||   ||||||| ||||||||     
T  28997815 gaaataaaagaggtttatcattttgtcaataaaactataatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 28997716  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||| |||||||    
T  28997715 ccctgtaattaaataacatgtattttgaccat 28997684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 399703 - 399573
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  399703 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 399604  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  399603 cctgtaattaaataacatgtattctgaccat 399573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 31028033 - 31028163
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaat 201  Q
    |||||||||||||||||  | ||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||||| | ||||||| | |||||    
T  31028033 tcgaaataaaagaggttccttattttgtcaacaaaagtacaatttaaaatatggctattaattgaaattgaccatgtaatatacgtgaagtctgaaaaat 31028132  T
Q  202 tgaccctgtaattaaataacatgtattctga 232  Q
     ||| |||||||||||||| |||||||||||    
T  31028133 cgacgctgtaattaaataatatgtattctga 31028163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 34253186 - 34253087
Alignment:
Q  135 aaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgaccctgtaattaaataacatgtattctgacc 234  Q
    |||| |||||||||||||||| ||||||||||||||| | || ||||||| | ||||||| ||||||||||| | ||| |||  ||||||||||||||||    
T  34253186 aaaagtacaatttaaaatagggttattaattgaaattaatcacgtaatatacgtgaagtctgaaaattgaccatttaaataa--aacatgtattctgacc 34253089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 23314082 - 23313949
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  23314082 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 23313983  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||| |||||||||||||||||||||||||||||    
T  23313982 gaccatgtaattaaataacatgtattctgaccat 23313949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 11957437 - 11957570
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||   ||||||| |||||||    
T  11957437 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatatgtgaagtctgaaaatt 11957536  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
     |||||| ||||||||||||||||||||||||||    
T  11957537 aaccctgcaattaaataacatgtattctgaccat 11957570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 15209367 - 15209497
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaat 201  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| | |||||    
T  15209367 tcgaaataaaagaggttcatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaaat 15209466  T
Q  202 tgaccctgtaattaaataacatgtattctga 232  Q
    |||||||||||||||||||||||||||||||    
T  15209467 tgaccctgtaattaaataacatgtattctga 15209497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 17446378 - 17446248
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||| |    
T  17446378 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattggc 17446279  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    | |||||||||||||||||||||||||||||    
T  17446278 catgtaattaaataacatgtattctgaccat 17446248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 32981139 - 32981270
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||   |||||| | ||| ||| |||||||||    
T  32981139 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccgcctaatatacgtgatgtctgaaaattga 32981238  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    || |||||||||||||||||||||||||||||    
T  32981239 ccatgtaattaaataacatgtattctgaccat 32981270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 7434510 - 7434375
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||| | ||||||| | ||||||| |||||||    
T  7434510 tcgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacaacgtaatatacgtgaagtctgaaaatt 7434411  T
Q  203 gaccctgtaattaaataac--atgtattctgaccat 236  Q
    |||| ||||||||||||||  |||||||||||||||    
T  7434410 gaccatgtaattaaataacatatgtattctgaccat 7434375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 42310019 - 42310153
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||| ||||||| | ||||||| |||||||||    
T  42310019 gaaataaaagatgtttatcattttgtaaacaaaagtacaatttaaaatatgattattaattgaaattgaccacgtaatatacatgaagtctgaaaattga 42310118  T
Q  205 cc---ctgtaattaaataacatgtattctgaccat 236  Q
    ||   ||||||||||||||||||||||||||||||    
T  42310119 ccctgctgtaattaaataacatgtattctgaccat 42310153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 41971337 - 41971464
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaattga 204  Q
    ||||||||||||||  || ||||| |||||||| |||||||||||||||| || |||||||||||||||||| |||||| | ||||| | | ||||||||    
T  41971337 aaataaaagaggttcctcgttttgacaacaaaagtacaatttaaaatagggttgttaattgaaattgaccatataatatacgtgaagcctgaaaaattga 41971436  T
Q  205 ccctgtaattaaataacatgtattctga 232  Q
    ||||||||||||||||||||||||||||    
T  41971437 ccctgtaattaaataacatgtattctga 41971464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 35908644 - 35908563
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatat 184  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  35908644 tcgaaataaaagaggtttatcattttgtcaataaaaatacaatttaaaataggattattaattaaaattgacaatgtaatat 35908563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 33490441 - 33490340
Alignment:
Q  130 tcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagt-cggaaaattgaccctgtaattaaataacatgtatt 228  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||  | ||||||| || |||||||||||||||||||||    
T  33490441 tcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtatgaaaaattgcccatgtaattaaataacatgtatt 33490342  T
Q  229 ct 230  Q
    ||    
T  33490341 ct 33490340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 3830040 - 3829961
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaat 182  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  3830040 tcgaaataaaataggtttataattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccctgtaat 3829961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 3829976 - 3829938
Alignment:
Q  198 aaattgaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3829976 aaattgaccctgtaattaaataacatgtattctgaccat 3829938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 41753182 - 41753132
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||| |||||    
T  41753182 tcgaaataaaagaggttcatcatttttacaacaaaaatacaatttgaaata 41753132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 25017616 - 25017566
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    ||||||||||||||| || |||||||||| | ||||||||||||| |||||    
T  25017616 tcgaaataaaagaggcttgtcattttgtcgataaaaatacaatttgaaata 25017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 51053199 - 51053149
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    ||||||||||| || || || ||||| ||||||||||||||||||||||||    
T  51053199 tcgaaataaaaaagattcattattttatcaacaaaaatacaatttaaaata 51053149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 32303 - 32170
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| | |||||||    
T  32303 tcgaaataaaaaaggtttatcattttgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagcctgaaaatt 32204  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
     ||||| |||||||||||||||||||||||||||    
T  32203 taccctataattaaataacatgtattctgaccat 32170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 34083207 - 34083333
Alignment:
Q  110 aaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgaccctg 209  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||| |||||| || ||||||||||||||    
T  34083207 aaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaatatacttgaactctgaaaattgaccctg 34083306  T
Q  210 taattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||    
T  34083307 taattaaataacatgtattctgaccat 34083333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 35515082 - 35514956
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||||| |    
T  35515082 gaaataaaaaaggtttatcattttatcaacaaaaatacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaattta 35514983  T
Q  205 ccctgtaattaaataacatgtattctg 231  Q
    |||||||||||||||||||||||||||    
T  35514982 ccctgtaattaaataacatgtattctg 35514956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 19391231 - 19391102
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||| ||||||||||    
T  19391231 aaataaaagaggtttatcattttatcaacaaaagtacaatttaaaataggtt-attaactgaaattgaccacgtaatatacgtgaagtctgaaaattgac 19391133  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  19391132 cctgtaattaaataacatgtattctgaccat 19391102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 45184066 - 45183935
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||| ||||||||     
T  45184066 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 45183967  T
Q  205 ccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||| |||||||    
T  45183966 ccctgtaattaaataacatgtattttgaccat 45183935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 40080820 - 40080953
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  40080820 tcgaaataaaaaaggtttatcattttgtcaacaaaagtacaatttaaaataaggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaatt 40080919  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||| | |||||||||||||| ||||||||||||    
T  40080920 gaccatataattaaataacatatattctgaccat 40080953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 6929975 - 6930098
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||| ||||||||||||   ||||||| |||||||||    
T  6929975 gaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaatttaccatgtaatatgtgtgaagtctgaaaattga 6930074  T
Q  205 ccctgtaattaaataacatgtatt 228  Q
    ||||||||||||||||||||||||    
T  6930075 ccctgtaattaaataacatgtatt 6930098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 6268503 - 6268633
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| |||| ||||||| | ||||||| ||||||||||    
T  6268503 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaaccacgtaatatacgtgaagtctgaaaattgac 6268602  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    | |||||||||||||||||||||||||||||    
T  6268603 cttgtaattaaataacatgtattctgaccat 6268633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 11017349 - 11017482
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||| |||| |||||||||||||   ||||||| |||||||    
T  11017349 tcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggattattaattaaaatcgaccatgtaatatatgtgaagtctgaaaatt 11017448  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    | |||||||||||||||||||||||| |||||||    
T  11017449 ggccctgtaattaaataacatgtattttgaccat 11017482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 22967527 - 22967655
Alignment:
Q  108 ataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgaccc 207  Q
    ||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| |||| ||||||| | ||||||  ||||||||||||    
T  22967527 ataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaaccacgtaatatacgtgaagtttgaaaattgaccc 22967626  T
Q  208 tgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||    
T  22967627 tgtaattaaataacatgtattctgaccat 22967655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 39772876 - 39772746
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| |||||||||  ||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  39772876 aaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 39772777  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  39772776 cctgtaattaaataacatgtattctgaccat 39772746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 19564595 - 19564729
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||| || ||||||||||||||| ||||| |||||| ||||||| | |||||||||||||||||||||||||||| | ||||||| |||||||    
T  19564595 tcgaaataaaaaagatttatcattttgtcatcaaaagtacaatgtaaaatatggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 19564694  T
Q  203 gaccctgt-aattaaataacatgtattctgaccat 236  Q
    |||| ||| |||||||| ||||||||| |||||||    
T  19564695 gaccttgtgaattaaatcacatgtattttgaccat 19564729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 45336924 - 45336812
Alignment:
Q  125 ttttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgaccctgt-aattaaataacat 223  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||| | ||| ||| |||||||| ||||    
T  45336924 ttttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaagtaaccttgtaaattaaatcacat 45336825  T
Q  224 gtattctgaccat 236  Q
    ||||||| |||||    
T  45336824 gtattctaaccat 45336812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 5136377 - 5136252
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaattga 204  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||| | |||| || | ||||||||    
T  5136377 aaataaaagaggttc-tcagtttgtcaacaaaaatacaatttaaaataggattattaattgaaattga-tatgtaatatacgtgaaatctgaaaaattga 5136280  T
Q  205 ccctgtaattaaataacatgtattctga 232  Q
    ||||||||||||||||| ||| ||||||    
T  5136279 ccctgtaattaaataacgtgtcttctga 5136252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 1185591 - 1185698
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaattga 204  Q
    ||||||||||||||  | ||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||||||| | ||||||| | ||||||||    
T  1185591 aaataaaagaggttccttattttgtcaacaaaagtgaaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaaattga 1185690  T
Q  205 ccctgtaa 212  Q
    ||||||||    
T  1185691 ccctgtaa 1185698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 33041998 - 33041905
Alignment:
Q  143 aatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||| ||||||| ||||||||| |||||||| |||||||||   ||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  33041998 aattttaaataggattattaattaaaattgactatgtaatatatgtgaagtctgaaaattggccctgtaattaaataacatgtattttgaccat 33041905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 27936238 - 27936159
Alignment:
Q  104 cgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaa-ttgaaattgaccatgtaat 182  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||||||| ||||||| |||||||| ||| ||||||    
T  27936238 cgaaataaaataggtttatcattttgtcaacaaaagtaaaatttaaaatagggttattaatttgaaattaaccctgtaat 27936159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 43137356 - 43137306
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  43137356 tcgaaataaaagaggtttgtcattttttcaacaaaaatacaatttaaaata 43137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 6502718 - 6502772
Alignment:
Q  174 ccatgtaatattcttgaagtcggaaaattgaccctgtaattaaataacatgtatt 228  Q
    |||| |||||| | ||||||| |||||||| |||||||||||||| |||||||||    
T  6502718 ccatataatatacgtgaagtctgaaaattggccctgtaattaaattacatgtatt 6502772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 27936174 - 27936136
Alignment:
Q  198 aaattgaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  27936174 aaattaaccctgtaattaaatagcatgtattctgaccat 27936136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 37381814 - 37381864
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||||||||||||  ||| ||||||||||||| ||| ||||||||||    
T  37381814 tcgaaataaaagaggttcgtcactttgtcaacaaaagtacgatttaaaata 37381864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 36409572 - 36409439
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||    
T  36409572 tcgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagg-ttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 36409474  T
Q  203 gaccctgt-aattaaataacatgtattctgaccat 236  Q
    |||| ||| |||||||| |||||||||||||||||    
T  36409473 gaccttgtaaattaaatcacatgtattctgaccat 36409439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 34135884 - 34136017
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||| |||||||    
T  34135884 tcgaaataaaagatgtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 34135983  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||| |||||||    
T  34135984 gaccctgtaattaaataacatgtattttgaccat 34136017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 3647876 - 3648003
Alignment:
Q  109 taaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgaccct 208  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||| | ||||||| ||||||| |||||    
T  3647876 taaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacataatatacatgaagtctgaaaatttaccct 3647975  T
Q  209 gtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||| |||||||    
T  3647976 gtaattaaataacatgtattttgaccat 3648003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 40469946 - 40470076
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtc-ggaaaat 201  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||   |||||    
T  40469946 tcgaaataaaagaggttcctcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctaaaaaat 40470045  T
Q  202 tgaccctgtaattaaataacatgtattctga 232  Q
    |||||||||||||||||||||||||||||||    
T  40470046 tgaccctgtaattaaataacatgtattctga 40470076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 24019472 - 24019602
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  24019472 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 24019571  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  24019572 cctgtaattaaataacatgtattctgaccat 24019602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 28524284 - 28524154
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  28524284 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 28524185  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  28524184 cctgtaattaaataacatgtattctgaccat 28524154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 39915600 - 39915470
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  39915600 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 39915501  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  39915500 cctgtaattaaataacatgtattctgaccat 39915470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 4405094 - 4404961
Alignment:
Q  105 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattga 204  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| | ||||||||| ||||| ||||||||||||   ||||||| ||||||||     
T  4405094 gaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataagattattaattaaaattaaccatgtaatatatgtgaagtctgaaaattgg 4404995  T
Q  205 ccctgtaattaaataacatgtattctgaccatat 238  Q
    |||||||||||||||||||||||| |||||||||    
T  4404994 ccctgtaattaaataacatgtattttgaccatat 4404961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 29727463 - 29727588
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||   ||||||| |||||||    
T  29727463 tcgaaataaaagatgtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatatgtgaagtctgaaaatt 29727562  T
Q  203 gaccctgtaattaaataacatgtatt 228  Q
    |||  |||||||||||||||||||||    
T  29727563 gacattgtaattaaataacatgtatt 29727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 15839362 - 15839231
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||| ||||||| ||| ||||| ||||||||||    
T  15839362 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaataggattattaattaaaattgaccacgtaatatacttaaagtctgaaaattgac 15839263  T
Q  206 cctgtaa----ttaaataacatgtattctgac 233  Q
    |||||||    |||||||||||||||||||||    
T  15839262 cctgtaattaattaaataacatgtattctgac 15839231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 16787104 - 16787237
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaatt 202  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   |||||||  ||||||    
T  16787104 tcgaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggcttattaattaaaattgaccatgtaatatatgtgaagtctaaaaatt 16787203  T
Q  203 gaccctgtaattaaataacatgtattctgaccat 236  Q
    |  ||||||||||||||||||||||| |||||||    
T  16787204 ggtcctgtaattaaataacatgtattttgaccat 16787237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 7279115 - 7278981
Alignment:
Q  103 tcgaaataaaagaggttt-atcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaat 201  Q
    ||||||||||| |||||| ||||||| |||||||||| |||||||||||||| | ||||||||||||||||| ||| |||||| | ||||||| ||||||    
T  7279115 tcgaaataaaataggttttatcatttagtcaacaaaagtacaatttaaaataagattattaattgaaattgatcatataatatacgtgaagtctgaaaat 7279016  T
Q  202 tgaccctgtaattaaataacatgtattctgaccat 236  Q
    || |||||||||||||||||||||||||| |||||    
T  7279015 tggccctgtaattaaataacatgtattcttaccat 7278981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 23403153 - 23403023
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||||| ||||||||| |||||||||||||| |||   ||||||| ||||||||      
T  23403153 aaataaaataggtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtattatatgtgaagtctgaaaattggt 23403054  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||| |||| |||||||    
T  23403053 cctgtaattaaataacatttattttgaccat 23403023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 9878251 - 9878175
Alignment:
Q  160 ttaattgaaattgaccatgtaatattcttgaagtcggaaaattgaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9878251 ttaattgaaattgaccatgtaatatacatgaagtctgaaaattgaccctgtaattaaataacatgtattctgaccat 9878175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 3436319 - 3436196
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaa-attga 204  Q
    |||||||| |||||  ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| || | ||||||| |||| |||||    
T  3436319 aaataaaataggttcctcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatataagatacgtgaagtctgaaacattga 3436220  T
Q  205 ccctgtaattaaataacatgtatt 228  Q
    || |||| | ||||||||||||||    
T  3436219 ccatgtagtaaaataacatgtatt 3436196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 42231991 - 42231915
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaat 182  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  42231991 aaataaaataggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccctgtaat 42231915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 27046900 - 27046841
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttatta 162  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  27046900 tcgaaataaaagaggtttatcattttgtcaacagaagtacaatttaaaatagggttatta 27046841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 29632472 - 29632413
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaatt 165  Q
    ||||||| || | |||||||||| ||||||||| |||||||||||||||| |||||||||    
T  29632472 aaataaatgaagcttatcattttatcaacaaaagtacaatttaaaatagggttattaatt 29632413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 42231930 - 42231892
Alignment:
Q  198 aaattgaccctgtaattaaataacatgtattctgaccat 236  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  42231930 aaattgaccctgtaattaaataacatgtattttgaccat 42231892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 2727959 - 2728008
Alignment:
Q  133 acaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaat 182  Q
    |||||| |||||||||||||| | ||||||||||||||||||| ||||||    
T  2727959 acaaaagtacaatttaaaatacggttattaattgaaattgaccctgtaat 2728008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 2727993 - 2728023
Alignment:
Q  198 aaattgaccctgtaattaaataacatgtatt 228  Q
    |||||||||||||||||||||||||||||||    
T  2727993 aaattgaccctgtaattaaataacatgtatt 2728023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 21958742 - 21958692
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||||||||||||  ||||||| ||||||||| |||||||| |||||    
T  21958742 tcgaaataaaagaggttcttcattttttcaacaaaagtacaattttaaata 21958692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 32343046 - 32342996
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||||||||||| |  |||||||||||||||| |||||||| |||||    
T  32343046 tcgaaataaaagaggtatgccattttgtcaacaaaactacaatttgaaata 32342996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 32355533 - 32355483
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||||||||||| |  |||||||||||||||| |||||||| |||||    
T  32355533 tcgaaataaaagaggtatgccattttgtcaacaaaactacaatttgaaata 32355483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 32359652 - 32359602
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||||||||||| |  |||||||||||||||| |||||||| |||||    
T  32359652 tcgaaataaaagaggtatgccattttgtcaacaaaactacaatttgaaata 32359602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 32372183 - 32372133
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||| ||||||| | ||||||||||||||||| |||||||| |||||    
T  32372183 tcgaaatataagaggtatgtcattttgtcaacaaaactacaatttgaaata 32372133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 18644 - 18515
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||| | ||||||| |||||||||     
T  18644 aaataaaagaggtttatcattttatcaacaaaagtacaatttaatatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga- 18546  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||| ||||||    
T  18545 cctgtaattaaataacatgtattccgaccat 18515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 479538 - 479668
Alignment:
Q  106 aaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaataggtttattaattgaaattgaccatgtaatattcttgaagtcggaaaattgac 205  Q
    ||||||| || |||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||| |||| ||||||| | ||||||| ||||||||||    
T  479538 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 479637  T
Q  206 cctgtaattaaataacatgtattctgaccat 236  Q
    |||||||||||||||||||||||||||||||    
T  479638 cctgtaattaaataacatgtattctgaccat 479668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 214106 - 214156
Alignment:
Q  103 tcgaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaata 153  Q
    |||||||||||||||||  ||||||| ||||||||| |||||||| |||||    
T  214106 tcgaaataaaagaggttcttcattttttcaacaaaagtacaattttaaata 214156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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