View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0669_low_31 (Length: 387)

Name: NF0669_low_31
Description: NF0669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0669_low_31
NF0669_low_31
[»] chr7 (44 HSPs)
chr7 (43-337)||(9006664-9006957)
chr7 (132-332)||(42620942-42621145)
chr7 (62-314)||(12491069-12491321)
chr7 (166-332)||(14944070-14944238)
chr7 (166-332)||(15371663-15371831)
chr7 (132-337)||(2992011-2992219)
chr7 (132-325)||(14248641-14248832)
chr7 (132-332)||(5381911-5382114)
chr7 (132-332)||(5391549-5391752)
chr7 (132-332)||(5926898-5927101)
chr7 (132-332)||(8500812-8501015)
chr7 (132-332)||(8511282-8511485)
chr7 (132-332)||(9535336-9535539)
chr7 (132-332)||(9545619-9545822)
chr7 (132-332)||(26348245-26348448)
chr7 (132-332)||(32098143-32098346)
chr7 (132-332)||(32108580-32108783)
chr7 (132-332)||(46496877-46497080)
chr7 (132-332)||(46507489-46507692)
chr7 (132-312)||(16132010-16132192)
chr7 (132-312)||(16142559-16142741)
chr7 (132-312)||(44897101-44897283)
chr7 (132-312)||(44907504-44907686)
chr7 (132-332)||(6534269-6534472)
chr7 (132-332)||(6544568-6544771)
chr7 (132-332)||(11626460-11626663)
chr7 (132-332)||(43983240-43983443)
chr7 (209-332)||(26363359-26363483)
chr7 (181-335)||(40701686-40701840)
chr7 (132-267)||(7034850-7034986)
chr7 (196-313)||(33090975-33091092)
chr7 (196-270)||(41027368-41027443)
chr7 (210-272)||(12827543-12827605)
chr7 (210-272)||(13285969-13286031)
chr7 (210-272)||(15988853-15988915)
chr7 (210-272)||(31824544-31824606)
chr7 (210-272)||(42595179-42595241)
chr7 (210-272)||(5615680-5615742)
chr7 (246-332)||(27988254-27988339)
chr7 (62-107)||(12515090-12515135)
chr7 (132-205)||(27988758-27988831)
chr7 (285-332)||(24541096-24541143)
chr7 (166-325)||(12769867-12770028)
chr7 (210-272)||(25441910-25441972)
[»] chr4 (40 HSPs)
chr4 (132-337)||(13403140-13403347)
chr4 (132-332)||(26330988-26331190)
chr4 (132-333)||(16241823-16242027)
chr4 (132-337)||(9836163-9836370)
chr4 (132-332)||(15668950-15669152)
chr4 (132-332)||(16253175-16253378)
chr4 (132-332)||(17161001-17161203)
chr4 (132-332)||(18105518-18105721)
chr4 (132-330)||(11476686-11476886)
chr4 (132-332)||(6691981-6692184)
chr4 (132-332)||(6702387-6702590)
chr4 (132-332)||(16249209-16249412)
chr4 (132-332)||(17984967-17985170)
chr4 (132-332)||(21845866-21846069)
chr4 (132-332)||(21855458-21855661)
chr4 (132-332)||(21901729-21901932)
chr4 (132-332)||(21911321-21911524)
chr4 (132-332)||(40921606-40921809)
chr4 (177-337)||(6405972-6406133)
chr4 (166-332)||(52498894-52499058)
chr4 (132-332)||(5293191-5293394)
chr4 (132-332)||(5302850-5303053)
chr4 (132-332)||(27680854-27681057)
chr4 (132-332)||(27690509-27690712)
chr4 (132-317)||(13793168-13793349)
chr4 (181-332)||(3487775-3487928)
chr4 (181-332)||(3497098-3497251)
chr4 (137-281)||(19917980-19918128)
chr4 (137-337)||(1293114-1293317)
chr4 (70-281)||(41525672-41525882)
chr4 (166-337)||(14600845-14601013)
chr4 (210-272)||(26458170-26458232)
chr4 (210-272)||(522402-522464)
chr4 (210-272)||(17421506-17421568)
chr4 (285-332)||(17828769-17828816)
chr4 (285-332)||(17838160-17838207)
chr4 (210-265)||(30651390-30651445)
chr4 (246-332)||(7846988-7847073)
chr4 (294-332)||(16211451-16211489)
chr4 (212-272)||(16058066-16058126)
[»] chr8 (23 HSPs)
chr8 (132-332)||(791499-791702)
chr8 (137-337)||(17268599-17268801)
chr8 (137-332)||(7757526-7757723)
chr8 (132-332)||(9325129-9325332)
chr8 (132-332)||(21202907-21203110)
chr8 (132-332)||(21213323-21213526)
chr8 (132-332)||(21334061-21334264)
chr8 (137-337)||(2690390-2690592)
chr8 (132-332)||(21997567-21997770)
chr8 (132-332)||(21988033-21988236)
chr8 (214-337)||(5867569-5867692)
chr8 (201-281)||(37816675-37816755)
chr8 (210-271)||(37295701-37295762)
chr8 (181-281)||(18536406-18536506)
chr8 (210-272)||(14437197-14437259)
chr8 (210-269)||(26362544-26362603)
chr8 (127-190)||(22817513-22817577)
chr8 (285-332)||(13673993-13674040)
chr8 (285-332)||(14881960-14882007)
chr8 (285-332)||(14894310-14894357)
chr8 (246-329)||(20531554-20531636)
chr8 (285-332)||(33774404-33774451)
chr8 (259-332)||(5759145-5759218)
[»] chr1 (34 HSPs)
chr1 (132-332)||(2115763-2115966)
chr1 (132-332)||(21886076-21886279)
chr1 (132-332)||(8540014-8540216)
chr1 (138-311)||(41544211-41544386)
chr1 (132-337)||(1186520-1186722)
chr1 (132-332)||(30549700-30549903)
chr1 (132-332)||(8605253-8605455)
chr1 (132-332)||(42033954-42034160)
chr1 (166-332)||(13964658-13964826)
chr1 (132-337)||(25019226-25019434)
chr1 (132-332)||(16154646-16154849)
chr1 (132-332)||(21458391-21458594)
chr1 (210-337)||(34822784-34822911)
chr1 (166-337)||(18383119-18383292)
chr1 (138-325)||(18062322-18062511)
chr1 (138-337)||(2370509-2370710)
chr1 (137-337)||(22956314-22956516)
chr1 (210-269)||(1982255-1982314)
chr1 (259-332)||(1969100-1969174)
chr1 (67-152)||(13403707-13403792)
chr1 (210-269)||(1989673-1989732)
chr1 (166-332)||(22960631-22960800)
chr1 (210-329)||(52955473-52955592)
chr1 (285-332)||(18097206-18097253)
chr1 (210-272)||(1974889-1974951)
chr1 (210-272)||(41208351-41208413)
chr1 (285-332)||(20308609-20308656)
chr1 (285-332)||(20314293-20314340)
chr1 (285-332)||(20318317-20318364)
chr1 (285-332)||(25868021-25868068)
chr1 (200-251)||(50941008-50941059)
chr1 (246-332)||(26193675-26193760)
chr1 (200-258)||(30210869-30210927)
chr1 (166-337)||(21821585-21821759)
[»] scaffold0005 (2 HSPs)
scaffold0005 (132-332)||(310122-310324)
scaffold0005 (166-337)||(216365-216533)
[»] chr6 (33 HSPs)
chr6 (132-332)||(14791366-14791568)
chr6 (132-337)||(27787664-27787871)
chr6 (132-332)||(29540220-29540422)
chr6 (132-332)||(18200980-18201181)
chr6 (132-332)||(14045077-14045279)
chr6 (132-332)||(24922096-24922298)
chr6 (132-332)||(24931132-24931334)
chr6 (132-332)||(12454816-12455019)
chr6 (132-332)||(16897709-16897912)
chr6 (132-332)||(16908362-16908565)
chr6 (132-332)||(20912045-20912248)
chr6 (132-332)||(18159824-18160027)
chr6 (132-332)||(18169636-18169839)
chr6 (132-332)||(31357323-31357526)
chr6 (132-332)||(31367051-31367254)
chr6 (132-332)||(3285608-3285811)
chr6 (137-288)||(28092391-28092543)
chr6 (181-313)||(9761601-9761733)
chr6 (210-272)||(22223775-22223837)
chr6 (210-272)||(22249610-22249672)
chr6 (132-205)||(26020848-26020921)
chr6 (285-332)||(16321049-16321096)
chr6 (285-332)||(16333197-16333244)
chr6 (132-205)||(1596698-1596772)
chr6 (210-272)||(8563425-8563487)
chr6 (246-332)||(26161646-26161731)
chr6 (210-272)||(34765151-34765213)
chr6 (291-332)||(791500-791541)
chr6 (285-332)||(26021378-26021425)
chr6 (246-332)||(1596195-1596280)
chr6 (210-263)||(24361878-24361931)
chr6 (61-141)||(25508737-25508815)
chr6 (61-141)||(26022179-26022257)
[»] chr3 (33 HSPs)
chr3 (132-332)||(12089-12292)
chr3 (132-332)||(10012330-10012532)
chr3 (132-332)||(20491817-20492019)
chr3 (131-333)||(55478145-55478349)
chr3 (132-332)||(16335544-16335746)
chr3 (137-332)||(4024500-4024697)
chr3 (132-332)||(25432622-25432825)
chr3 (132-332)||(1685353-1685556)
chr3 (132-332)||(5655728-5655931)
chr3 (132-332)||(8972609-8972812)
chr3 (132-332)||(8983164-8983367)
chr3 (132-332)||(9536898-9537101)
chr3 (132-332)||(9547224-9547427)
chr3 (132-332)||(6422065-6422267)
chr3 (133-332)||(6432505-6432706)
chr3 (132-332)||(4371140-4371343)
chr3 (132-332)||(4380859-4381062)
chr3 (187-312)||(21542440-21542565)
chr3 (165-332)||(12376291-12376461)
chr3 (210-272)||(24793273-24793335)
chr3 (132-205)||(2489306-2489379)
chr3 (210-272)||(17733934-17733996)
chr3 (210-272)||(19035203-19035265)
chr3 (210-272)||(49387558-49387620)
chr3 (132-205)||(4782708-4782781)
chr3 (132-205)||(13119705-13119778)
chr3 (285-332)||(2489835-2489882)
chr3 (285-332)||(4783244-4783291)
chr3 (285-332)||(19828507-19828554)
chr3 (285-332)||(20745339-20745386)
chr3 (200-271)||(29709458-29709529)
chr3 (246-332)||(13120196-13120281)
chr3 (210-268)||(24873442-24873500)
[»] chr2 (36 HSPs)
chr2 (31-190)||(70095-70254)
chr2 (132-332)||(24696598-24696801)
chr2 (132-332)||(38957831-38958034)
chr2 (132-332)||(38930494-38930698)
chr2 (195-337)||(72294-72436)
chr2 (132-273)||(29423188-29423330)
chr2 (132-332)||(45014495-45014698)
chr2 (132-332)||(2998710-2998913)
chr2 (132-332)||(9502774-9502977)
chr2 (132-332)||(9514140-9514343)
chr2 (132-332)||(18650981-18651184)
chr2 (132-332)||(18663099-18663302)
chr2 (132-332)||(45024572-45024775)
chr2 (132-332)||(4457958-4458161)
chr2 (132-332)||(4467583-4467786)
chr2 (132-332)||(17488453-17488656)
chr2 (168-329)||(44639076-44639238)
chr2 (132-332)||(5337148-5337351)
chr2 (132-332)||(5347001-5347204)
chr2 (196-329)||(40409202-40409335)
chr2 (137-234)||(24239139-24239239)
chr2 (210-272)||(19342105-19342167)
chr2 (210-272)||(23721735-23721797)
chr2 (246-332)||(12570325-12570410)
chr2 (210-272)||(22901908-22901970)
chr2 (210-272)||(22908968-22909030)
chr2 (132-205)||(16902579-16902652)
chr2 (132-205)||(16995970-16996043)
chr2 (289-327)||(24239413-24239451)
chr2 (223-272)||(16135336-16135385)
chr2 (196-281)||(16327827-16327912)
chr2 (210-329)||(27160116-27160235)
chr2 (210-329)||(27170485-27170604)
chr2 (285-332)||(573999-574046)
chr2 (285-332)||(22687941-22687988)
chr2 (285-332)||(45190576-45190623)
[»] scaffold0043 (1 HSPs)
scaffold0043 (132-332)||(92955-93158)
[»] scaffold0065 (1 HSPs)
scaffold0065 (131-331)||(15612-15814)
[»] scaffold0611 (1 HSPs)
scaffold0611 (132-332)||(8133-8336)
[»] scaffold0234 (1 HSPs)
scaffold0234 (132-332)||(21259-21461)
[»] chr5 (38 HSPs)
chr5 (166-330)||(31105177-31105343)
chr5 (132-332)||(22244477-22244679)
chr5 (132-332)||(23378683-23378881)
chr5 (132-332)||(18361040-18361243)
chr5 (132-332)||(21753206-21753409)
chr5 (132-332)||(21762493-21762696)
chr5 (132-332)||(26192096-26192299)
chr5 (132-332)||(26202700-26202903)
chr5 (132-332)||(32070203-32070406)
chr5 (132-332)||(33939080-33939283)
chr5 (132-332)||(33949480-33949683)
chr5 (132-312)||(8765460-8765642)
chr5 (132-312)||(11411204-11411386)
chr5 (132-332)||(18389997-18390200)
chr5 (132-332)||(27411911-27412114)
chr5 (137-337)||(21484134-21484337)
chr5 (210-272)||(19548653-19548715)
chr5 (210-281)||(36316175-36316246)
chr5 (132-205)||(37548547-37548620)
chr5 (132-205)||(37647941-37648014)
chr5 (246-332)||(4038411-4038496)
chr5 (210-272)||(20947615-20947677)
chr5 (210-272)||(20958004-20958066)
chr5 (246-332)||(31916551-31916636)
chr5 (246-332)||(42090948-42091033)
chr5 (137-266)||(205794-205926)
chr5 (285-332)||(22173719-22173766)
chr5 (285-332)||(27274650-27274697)
chr5 (285-332)||(30944255-30944302)
chr5 (285-332)||(30953677-30953724)
chr5 (285-332)||(34130960-34131007)
chr5 (285-332)||(37299284-37299331)
chr5 (285-332)||(37549074-37549121)
chr5 (285-332)||(37651872-37651919)
chr5 (285-332)||(37817339-37817386)
chr5 (246-332)||(19888785-19888870)
chr5 (259-332)||(20764098-20764171)
chr5 (166-266)||(20896759-20896861)
[»] scaffold0277 (1 HSPs)
scaffold0277 (132-332)||(19479-19681)
[»] scaffold0086 (1 HSPs)
scaffold0086 (132-332)||(55922-56129)
[»] scaffold0106 (1 HSPs)
scaffold0106 (177-332)||(17435-17592)
[»] scaffold0016 (1 HSPs)
scaffold0016 (132-332)||(13584-13782)
[»] scaffold0254 (1 HSPs)
scaffold0254 (132-332)||(7945-8148)
[»] scaffold0014 (4 HSPs)
scaffold0014 (132-332)||(234091-234294)
scaffold0014 (246-332)||(153746-153831)
scaffold0014 (246-332)||(146432-146517)
scaffold0014 (285-332)||(114782-114829)
[»] scaffold0690 (1 HSPs)
scaffold0690 (194-332)||(4376-4516)
[»] scaffold0047 (1 HSPs)
scaffold0047 (206-332)||(74896-75023)
[»] scaffold0057 (1 HSPs)
scaffold0057 (126-337)||(65445-65658)
[»] scaffold0015 (1 HSPs)
scaffold0015 (137-337)||(198800-199002)
[»] scaffold0142 (1 HSPs)
scaffold0142 (137-337)||(28867-29070)
[»] scaffold0004 (1 HSPs)
scaffold0004 (125-313)||(241778-241970)
[»] scaffold0406 (1 HSPs)
scaffold0406 (166-337)||(15139-15312)
[»] scaffold0141 (1 HSPs)
scaffold0141 (166-332)||(18500-18669)
[»] scaffold0433 (2 HSPs)
scaffold0433 (132-205)||(13178-13251)
scaffold0433 (285-332)||(13709-13756)
[»] scaffold0764 (1 HSPs)
scaffold0764 (210-272)||(984-1046)
[»] scaffold0313 (2 HSPs)
scaffold0313 (210-272)||(5563-5625)
scaffold0313 (210-272)||(19720-19782)
[»] scaffold0811 (1 HSPs)
scaffold0811 (210-273)||(3715-3778)
[»] scaffold0553 (1 HSPs)
scaffold0553 (285-332)||(1125-1172)
[»] scaffold0031 (1 HSPs)
scaffold0031 (285-332)||(112050-112097)
[»] scaffold0520 (1 HSPs)
scaffold0520 (338-367)||(6042-6071)
[»] scaffold0265 (1 HSPs)
scaffold0265 (166-337)||(11050-11224)


Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 43 - 337
Target Start/End: Complemental strand, 9006957 - 9006664
Alignment:
Q  43 atgctttaggaaattttatgatactgaacagtacctgctcccttatgtgtctaattctaattgaatatgactttgaggttcctttttgcttttgcttttc 142  Q
    |||||||| || ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||  |||||||||||||||||     
T  9006957 atgctttaagagattttctaatactgaacagtacctgctcccttatgtgtctaattcttattgaatatgactttgaacttt-tttttgcttttgcttttt 9006859  T
Q  143 acctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatctgtttcacttagaatgatttgtaaggctaccat 242  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  9006858 acctactgtactgttcacagttaaagcatgtgcagagctgaacattctgaacatcataatgttcatctgtttcacttagaaggatttgtaagactaccat 9006759  T
Q  243 ttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtatttca 337  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9006758 ttgatgtaatcaaatcctaatagtgaaacaacaatgaagagaagtgattgcaacatctaggatgatattctctttggaatatttctagtatttca 9006664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 42621145 - 42620942
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    |||||||| ||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  42621145 ttttgcttttcacctactgtactgttcataaagtaagcatgtacagagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 42621046  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||| ||||||||||||    
T  42621045 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattcct 42620946  T
Q  329 agta 332  Q
    ||||    
T  42620945 agta 42620942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 62 - 314
Target Start/End: Complemental strand, 12491321 - 12491069
Alignment:
Q  62 gatactgaacagtacctgctcccttatgtgtctaattctaattgaatatgactttgaggttcctttttgcttttgcttttcacctactgtattgttcaca 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| | ||  |||| || | |||||||||||||||| ||||||||||  |||||||    
T  12491321 gatactgtacagtacctgctcccttatgtgtctaattctaattgaatctcac-atgagcttgc-ttttgcttttgctttttacctactgtacagttcaca 12491224  T
Q  162 g-ttaaagcatgtgcagagctgaacattctaaacatcagaatgtt-catctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcc 259  Q
    | ||||||||||| |||||||||||||||| | |||||||||||| |||||||||||||||| |||||||||||| ||   || || ||||||| |||||    
T  12491223 gtttaaagcatgtccagagctgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagacttgtatctggtgtaatc-aatcc 12491125  T
Q  260 taatagtgaa-acaacaatgaagcgtagtgattgcaacatctaggatgatattctc 314  Q
    ||||| |||| |||| | ||||| | ||||||||||| ||||||||||||||||||    
T  12491124 taatattgaagacaaaattgaagtgcagtgattgcaatatctaggatgatattctc 12491069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 166 - 332
Target Start/End: Complemental strand, 14944238 - 14944070
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaata 264  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  14944238 aagcatgtgcagagctgaacattctaaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaata 14944139  T
Q  265 gtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    ||||||||||||||||| | ||| ||   ||||| ||||||||||||| ||| |||||| |||||||||    
T  14944138 gtgaaacaacaatgaagagcagttatattaacatataggatgatattcccttgtggaatgttcctagta 14944070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 166 - 332
Target Start/End: Complemental strand, 15371831 - 15371663
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaata 264  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15371831 aagcatgtgcagagctgaacattctaaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaata 15371732  T
Q  265 gtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    ||||||||||||||||| | ||| ||   ||||| ||||||||||||| ||| |||||| |||||||||    
T  15371731 gtgaaacaacaatgaagagcagttatattaacatataggatgatattcccttgtggaatgttcctagta 15371663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 337
Target Start/End: Original strand, 2992011 - 2992219
Alignment:
Q  132 ttttgcttttcacctactgtattgttcaca--gttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatt 228  Q
    ||||||||||||||||||||| |||||| |  || ||| |||| || ||| |||||||||| | ||||||||||||| | | |||||| |||| ||||||    
T  2992011 ttttgcttttcacctactgtactgttcataaagtgaaa-catgagctgagttgaacattctgatcatcagaatgttccttttgtttcatttaggatgatt 2992109  T
Q  229 tgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattcc 327  Q
    | |||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| | |||| ||||||||    
T  2992110 tctaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagaagtgattgtaacatctaggatgatattcccttttgaaatattcc 2992209  T
Q  328 tagtatttca 337  Q
    ||||| ||||    
T  2992210 tagtacttca 2992219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 325
Target Start/End: Original strand, 14248641 - 14248832
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct--gtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| ||||||    |||||||||||  |||||||||||||  | | ||||||||||| | |   |||||||| | |||||||    
T  14248641 ttttgcttttcacctactgtactgttca----taaagcatgtgttgagctgaacattccgatcttcagaatgttccttttgttttcacttgggatgattt 14248736  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatatt 325  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||    
T  14248737 gtaagactaccatttgatgtaatcgaatccttatagtgaaacaacaatgaagagcagtgattgtaacatctaggatgatattctccttggaatatt 14248832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 5381911 - 5382114
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  5381911 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 5382010  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  5382011 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 5382110  T
Q  329 agta 332  Q
    ||||    
T  5382111 agta 5382114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 5391549 - 5391752
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  5391549 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 5391648  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  5391649 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 5391748  T
Q  329 agta 332  Q
    ||||    
T  5391749 agta 5391752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 5927101 - 5926898
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  5927101 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 5927002  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  5927001 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 5926902  T
Q  329 agta 332  Q
    ||||    
T  5926901 agta 5926898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 8501015 - 8500812
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  8501015 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 8500916  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  8500915 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 8500816  T
Q  329 agta 332  Q
    ||||    
T  8500815 agta 8500812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 8511485 - 8511282
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  8511485 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 8511386  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  8511385 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 8511286  T
Q  329 agta 332  Q
    ||||    
T  8511285 agta 8511282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 9535336 - 9535539
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  9535336 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 9535435  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  |||||| | ||||||   ||||||||||||||||||| ||| || |||||||||    
T  9535436 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgataataacatctaggatgatattcccttgtgaaatattcct 9535535  T
Q  329 agta 332  Q
    ||||    
T  9535536 agta 9535539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 9545619 - 9545822
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  9545619 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 9545718  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  |||||| | ||||||   ||||||||||||||||||| ||| || |||||||||    
T  9545719 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgataataacatctaggatgatattcccttgtgaaatattcct 9545818  T
Q  329 agta 332  Q
    ||||    
T  9545819 agta 9545822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 26348245 - 26348448
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  26348245 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 26348344  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  26348345 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 26348444  T
Q  329 agta 332  Q
    ||||    
T  26348445 agta 26348448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 32098346 - 32098143
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  32098346 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 32098247  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  32098246 gtaagactatcatttgatgcaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 32098147  T
Q  329 agta 332  Q
    ||||    
T  32098146 agta 32098143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 32108783 - 32108580
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  32108783 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 32108684  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  32108683 gtaagactatcatttgatgcaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 32108584  T
Q  329 agta 332  Q
    ||||    
T  32108583 agta 32108580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 46497080 - 46496877
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  46497080 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 46496981  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  46496980 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 46496881  T
Q  329 agta 332  Q
    ||||    
T  46496880 agta 46496877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 46507692 - 46507489
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  46507692 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 46507593  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  46507592 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 46507493  T
Q  329 agta 332  Q
    ||||    
T  46507492 agta 46507489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 16132010 - 16132192
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  16132010 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 16132109  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattc 312  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||||    
T  16132110 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattc 16132192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 16142559 - 16142741
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  16142559 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 16142658  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattc 312  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||||    
T  16142659 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattc 16142741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 312
Target Start/End: Complemental strand, 44897283 - 44897101
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  44897283 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 44897184  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattc 312  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||||    
T  44897183 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattc 44897101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 312
Target Start/End: Complemental strand, 44907686 - 44907504
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  44907686 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 44907587  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattc 312  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||||    
T  44907586 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattc 44907504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 6534472 - 6534269
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| ||||||||||||||| |||||||    
T  6534472 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggatgattt 6534373  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  6534372 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 6534273  T
Q  329 agta 332  Q
    ||||    
T  6534272 agta 6534269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 6544771 - 6544568
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| ||||||||||||||| |||||||    
T  6544771 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggatgattt 6544672  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  6544671 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 6544572  T
Q  329 agta 332  Q
    ||||    
T  6544571 agta 6544568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 11626460 - 11626663
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  11626460 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 11626559  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  11626560 gtaagactatcatttgatgcaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 11626659  T
Q  329 agta 332  Q
    ||||    
T  11626660 agta 11626663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 43983443 - 43983240
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| |||||||||||||||  ||||||    
T  43983443 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggctgattt 43983344  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  43983343 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 43983244  T
Q  329 agta 332  Q
    ||||    
T  43983243 agta 43983240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 209 - 332
Target Start/End: Original strand, 26363359 - 26363483
Alignment:
Q  209 ctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgat 308  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||    
T  26363359 ctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgat 26363458  T
Q  309 att-ctctttggaatattcctagta 332  Q
    ||| || | || |||||||||||||    
T  26363459 attcctttgtgaaatattcctagta 26363483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 335
Target Start/End: Complemental strand, 40701840 - 40701686
Alignment:
Q  181 tgaacattctaaacatcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaa 280  Q
    ||||| |||| ||| ||| ||||||||| |||||||||||| || ||||||||| ||||||||||||||||||||||||||||| ||||||| || ||||    
T  40701840 tgaactttctgaacttcataatgttcatttgtttcacttaggataatttgtaagactaccatttgatgtaatcaaatcctaataatgaaacatcattgaa 40701741  T
Q  281 gcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtattt 335  Q
    | | ||||  |  ||||||||| ||||||||||   ||||||||||||| |||||    
T  40701740 gtgcagtgtgtataacatctagaatgatattcttgatggaatattcctaatattt 40701686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 267
Target Start/End: Original strand, 7034850 - 7034986
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    |||||||||||||| |||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||| |||| |||||||||| || |||||    
T  7034850 ttttgcttttcacccactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgttccatctatttcacttaggataatttg 7034949  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtg 267  Q
    | || ||||||||||||||||||||||||| ||||||    
T  7034950 ttagactaccatttgatgtaatcaaatccttatagtg 7034986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 33091092 - 33090975
Alignment:
Q  196 tcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaa 295  Q
    |||||| |||||  |||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||   |||||| | |||   || ||    
T  33091092 tcagaaagttcaattgtttcacttaggatgatttgtaagactctcatttgatgtaatcaaatcctaatagtgaaacattgatgaagtgcagtatatgtaa 33090993  T
Q  296 catctaggatgatattct 313  Q
    ||||||||||||||||||    
T  33090992 catctaggatgatattct 33090975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 41027443 - 41027368
Alignment:
Q  196 tcagaatgttc-atctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaa 270  Q
    ||||||||||| || |||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||    
T  41027443 tcagaatgttccatttgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaa 41027368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 12827543 - 12827605
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  12827543 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaaca 12827605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 13285969 - 13286031
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  13285969 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaaca 13286031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 15988853 - 15988915
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  15988853 tgtttcacttaggatgatttgtaagactgttatttgatgtaatcaaatcctaatagtgaaaca 15988915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 31824606 - 31824544
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | ||||||||||||||||||||||||||||||    
T  31824606 tgtttcacttaggatgatttgtaagacttgtaattgatgtaatcaaatcctaatagtgaaaca 31824544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 42595241 - 42595179
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | ||||||||||||||||||||||||||||||    
T  42595241 tgtttcacttaggatgatttgtaagactcttaattgatgtaatcaaatcctaatagtgaaaca 42595179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 5615680 - 5615742
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  5615680 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 5615742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 27988339 - 27988254
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||| | |||  | ||||| | ||||| |||| |||||||||| |||||||| |||||||||||||||||    
T  27988339 atgtaatcaaa-cctaatagtaagacacaactgaagtgcagtgaatgcatcatctaggataatattctcattggaatattcctagta 27988254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 12515135 - 12515090
Alignment:
Q  62 gatactgaacagtacctgctcccttatgtgtctaattctaattgaa 107  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||    
T  12515135 gatactgtacaatacctgttcccttatgtgtctaattctaattgaa 12515090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 27988831 - 27988758
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||| | | ||||||||||||    
T  27988831 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattttgaccatcagaatgtt 27988758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 24541096 - 24541143
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  24541096 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 24541143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 325
Target Start/End: Complemental strand, 12770028 - 12769867
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgtt-catctgtt-tcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaat 263  Q
    |||||||||||||| |||||||||| | ||| |||||||| ||| |||| | |||||  |||||||||||| ||  | |||||||| ||| |||| ||||    
T  12770028 aagcatgtgcagagatgaacattctgaccattagaatgttccatttgttcttacttaagatgatttgtaagacttgcttttgatgttatc-aatcttaat 12769930  T
Q  264 agt-gaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatatt 325  Q
    |||  |||||  | ||||| | ||||| || ||||| || ||| |||||||||||||||||||    
T  12769929 agtaaaaacataactgaagtgcagtgaatgtaacatatatgataatattctctttggaatatt 12769867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 25441972 - 25441910
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || || ||||||||||||||||||||||||    
T  25441972 tgtttcacttaggatgatttgtaagacttgtaattaatataatcaaatcctaatagtgaaaca 25441910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 132 - 337
Target Start/End: Original strand, 13403140 - 13403347
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  13403140 ttttgcttttcacctactgtactgttcataaagtaagcatgtgcagagctaaacattctaaccatcagaatgttccatctgtttcacttaggatgatttg 13403239  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattccta 329  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||   |||||||  ||||||||||||||||||| | |||||||||||||||    
T  13403240 taagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagaacagtgattttaacatctaggatgatattcccttttggaatattccta 13403339  T
Q  330 gtatttca 337  Q
    ||| ||||    
T  13403340 gtacttca 13403347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 26331190 - 26330988
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  26331190 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctaaccatcagaatgttccatctgtttcacttaggatgatttg 26331091  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||   ||||||||||||||||||| ||| | |||||||||||    
T  26331090 taagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtgatattaacatctaggatgatattcccttgtagaatattccta 26330991  T
Q  330 gta 332  Q
    |||    
T  26330990 gta 26330988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 132 - 333
Target Start/End: Complemental strand, 16242027 - 16241823
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    |||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  16242027 ttttgcttttcacctactgtactgttcataaagtaagcatgtgcagagcttgaacattctgaccatcagaatgttccatctgtttcacttaggatgattt 16241928  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||| ||||||||||||    
T  16241927 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattcct 16241828  T
Q  329 agtat 333  Q
    |||||    
T  16241827 agtat 16241823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 132 - 337
Target Start/End: Original strand, 9836163 - 9836370
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||||||||||||||||||||| | | ||||||||||| | | ||||||||||| ||||||||    
T  9836163 ttttgcttttcacctactgtactgttcataaagtaagcatgtgcagagctgaacattctgatcgtcagaatgttccttttgtttcacttaggatgatttg 9836262  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattccta 329  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||||| | |||||||||||||||    
T  9836263 taagactaccatttgatataatcaaatcctaatagtgaaacaacaatgaagagcagtgattaaaacatctaggatgatattcccttttggaatattccta 9836362  T
Q  330 gtatttca 337  Q
    ||| ||||    
T  9836363 gtacttca 9836370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 15669152 - 15668950
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    |||||||||| |||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||| || |||||||||| | ||||||||    
T  15669152 ttttgcttttgacctactgtactgttcataaaataagcatgtgctgagctgaacattctgaccatcagaatgttccatttgtttcactttggatgatttg 15669053  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||| |||||||||||||    
T  15669052 taagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattccta 15668953  T
Q  330 gta 332  Q
    |||    
T  15668952 gta 15668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 16253378 - 16253175
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||| |||||||||||||| |||||| |    ||||||||| |||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  16253378 ttttgcatttcacctactgtactgttcataaagtaagcatgtgtagagcttgaacattctgaccatcagaatgttccatctgtttcacttaggatgattt 16253279  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | ||| |||  ||||||||||||||||||| ||| ||||||||||||    
T  16253278 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtaattttaacatctaggatgatattcccttgtggaatattcct 16253179  T
Q  329 agta 332  Q
    ||||    
T  16253178 agta 16253175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 17161203 - 17161001
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||| || |||||||||||||||||||||||||||||| ||||||||||||||| |||||||     
T  17161203 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctaaacatcagaatgttccatctgtttcacttaggatgattta 17161104  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||   | ||||   |||||||| |||||||||| ||| |||||||||||||    
T  17161103 taagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagaacaatgatattaacatctaagatgatattcccttgtggaatattccta 17161004  T
Q  330 gta 332  Q
    |||    
T  17161003 gta 17161001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 18105518 - 18105721
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  18105518 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 18105617  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   ||||||||||||||||||| ||| || |||||||||    
T  18105618 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcccttgtgaaatattcct 18105717  T
Q  329 agta 332  Q
    ||||    
T  18105718 agta 18105721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 132 - 330
Target Start/End: Complemental strand, 11476886 - 11476686
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttg 230  Q
    ||||| |||||||||| |||| |||||| |  | || |||||||| ||||||||||||| | ||||||||||||| | | ||||||||||| || || ||    
T  11476886 ttttgattttcacctattgtagtgttcataaattaaacatgtgcaaagctgaacattctgatcatcagaatgttccttttgtttcacttaggataatctg 11476787  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattccta 329  Q
    ||||  |||||||||||||||| |||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| | |||||||||||||||    
T  11476786 taagaataccatttgatgtaataaaattctaatagtgaaacaacaatgaagagcagtgattgaaacatctaggatgatattcccttttggaatattccta 11476687  T
Q  330 g 330  Q
    |    
T  11476686 g 11476686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 6692184 - 6691981
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  6692184 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 6692085  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  6692084 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 6691985  T
Q  329 agta 332  Q
    ||||    
T  6691984 agta 6691981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 6702590 - 6702387
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  6702590 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 6702491  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  6702490 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 6702391  T
Q  329 agta 332  Q
    ||||    
T  6702390 agta 6702387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 16249412 - 16249209
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  16249412 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 16249313  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  16249312 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 16249213  T
Q  329 agta 332  Q
    ||||    
T  16249212 agta 16249209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 17984967 - 17985170
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  17984967 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 17985066  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  17985067 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 17985166  T
Q  329 agta 332  Q
    ||||    
T  17985167 agta 17985170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 21846069 - 21845866
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21846069 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21845970  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21845969 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21845870  T
Q  329 agta 332  Q
    ||||    
T  21845869 agta 21845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 21855661 - 21855458
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21855661 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21855562  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21855561 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21855462  T
Q  329 agta 332  Q
    ||||    
T  21855461 agta 21855458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 21901932 - 21901729
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21901932 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21901833  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21901832 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21901733  T
Q  329 agta 332  Q
    ||||    
T  21901732 agta 21901729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 21911524 - 21911321
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21911524 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21911425  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21911424 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21911325  T
Q  329 agta 332  Q
    ||||    
T  21911324 agta 21911321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 40921809 - 40921606
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  40921809 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 40921710  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  40921709 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 40921610  T
Q  329 agta 332  Q
    ||||    
T  40921609 agta 40921606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 177 - 337
Target Start/End: Original strand, 6405972 - 6406133
Alignment:
Q  177 gagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaaca 275  Q
    |||||||||||||| | ||||||||||||| | | ||||||||||  |||||||||||| || | ||||||||||||||||| |||||||||||||||||    
T  6405972 gagctgaacattctgatcatcagaatgttccttttgtttcacttatgatgatttgtaagacttctatttgatgtaatcaaattctaatagtgaaacaaca 6406071  T
Q  276 atgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtatttca 337  Q
    ||||||   | |||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  6406072 atgaagatcaatgattgtaacatctaggaagatattctctttggaatattcctagtacttca 6406133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 166 - 332
Target Start/End: Complemental strand, 52499058 - 52498894
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatag 265  Q
    |||||||||||||| |||||||||| | |||||||||||||   |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  52499058 aagcatgtgcagagttgaacattctgaccatcagaatgttc---tgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatag 52498962  T
Q  266 tgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    |||||||||||||||| | | ||||   || || ||||||||||||| ||| |||||||||| |||||    
T  52498961 tgaaacaacaatgaagagcaatgatattaatatttaggatgatattcccttatggaatattcatagta 52498894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 5293191 - 5293394
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| ||||||||||||||| |||||||    
T  5293191 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggatgattt 5293290  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  5293291 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 5293390  T
Q  329 agta 332  Q
    ||||    
T  5293391 agta 5293394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 5302850 - 5303053
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| ||||||||||||||| |||||||    
T  5302850 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggatgattt 5302949  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  5302950 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 5303049  T
Q  329 agta 332  Q
    ||||    
T  5303050 agta 5303053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 27680854 - 27681057
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| ||||||||||||||| |||||||    
T  27680854 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggatgattt 27680953  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  27680954 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 27681053  T
Q  329 agta 332  Q
    ||||    
T  27681054 agta 27681057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 27690509 - 27690712
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| ||||||||||||||| |||||||    
T  27690509 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggatgattt 27690608  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  27690609 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 27690708  T
Q  329 agta 332  Q
    ||||    
T  27690709 agta 27690712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 132 - 317
Target Start/End: Original strand, 13793168 - 13793349
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttg 230  Q
    |||||||||||||||| |||  ||||||    |||||||||||| ||| |||||||| | | | | ||||||||| | | |||||| |||| ||||||||    
T  13793168 ttttgcttttcacctattgttctgttca----taaagcatgtgctgag-tgaacattatgatctttagaatgttccttttgtttcatttaggatgatttg 13793262  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctcttt 317  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||||    
T  13793263 taagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtgattgtaacatctaggatgatattcccttt 13793349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 332
Target Start/End: Original strand, 3487775 - 3487928
Alignment:
Q  181 tgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatga 279  Q
    |||||||||| | ||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||||    
T  3487775 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatga 3487874  T
Q  280 agcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    || | |||| |   ||||||||||||||||||| ||| || |||||||||||||    
T  3487875 agagcagtgctattaacatctaggatgatattcccttgtgaaatattcctagta 3487928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 332
Target Start/End: Original strand, 3497098 - 3497251
Alignment:
Q  181 tgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatga 279  Q
    |||||||||| | ||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||||    
T  3497098 tgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatga 3497197  T
Q  280 agcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    || | |||| |   ||||||||||||||||||| ||| || |||||||||||||    
T  3497198 agagcagtgctattaacatctaggatgatattcccttgtgaaatattcctagta 3497251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 137 - 281
Target Start/End: Complemental strand, 19918128 - 19917980
Alignment:
Q  137 cttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc----atctgtttcacttagaatgatttgta 232  Q
    |||||||||||||||| ||||||||||||||||| |||| || ||||||||||| | |||||||||||||     | |||||||||||| |||||||| |    
T  19918128 cttttcacctactgtactgttcacagttaaagcaggtgctgaactgaacattctgatcatcagaatgttcctaattttgtttcacttaggatgatttgca 19918029  T
Q  233 aggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaag 281  Q
    || |  ||||||||||||||||| ||||||||||||||||| |||||||    
T  19918028 agacatccatttgatgtaatcaattcctaatagtgaaacaataatgaag 19917980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 337
Target Start/End: Complemental strand, 1293317 - 1293114
Alignment:
Q  137 cttttcacctactgtattgttcacagt-taaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgttt-cacttagaatgatttgtaa 233  Q
    ||||||||||| ||||||||||||| | | ||||||||||||||||||||||| | | ||||||||||||| || ||||| ||||||| || ||||||||    
T  1293317 cttttcacctattgtattgttcacaatatgaagcatgtgcagagctgaacattttgatcatcagaatgttccatttgttttcacttagtattatttgtaa 1293218  T
Q  234 ggctaccatttgatgtaatcaaatcctaatagtgaaacaacaa-tgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    | ||   | ||||||||||||| ||||||||||||||  | || ||||| | ||| ||||||||||||| ||||||||||   |||||||||||||||||    
T  1293217 gacttgtacttgatgtaatcaa-tcctaatagtgaaaacataactgaagtgcagtaattgcaacatctaagatgatattcaaattggaatattcctagta 1293119  T
Q  333 tttca 337  Q
     ||||    
T  1293118 cttca 1293114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 70 - 281
Target Start/End: Complemental strand, 41525882 - 41525672
Alignment:
Q  70 acagtacctgctcccttatgtgtctaattctaattgaatatgactttgaggttcctttttgcttttgcttttcacctactgta-ttgt---tcacagtta 165  Q
    ||||||||||||| | ||| |||||||||||||||||||| |||     | || |||||||||||||||||||||| | | || ||||   ||| | |||    
T  41525882 acagtacctgctctcatatatgtctaattctaattgaataagac-----gctttctttttgcttttgcttttcaccaaatttacttgtctgtcagattta 41525788  T
Q  166 aagcatgtgcag-agctgaacattctaaacatcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaata 264  Q
    |||||||||| | |   ||||||||| ||| ||| ||||||||| ||||| |||||| |||||||||||| |  |||||||||||||| |||||||||||    
T  41525787 aagcatgtgctggaaacgaacattctgaac-tcaaaatgttcatttgttttacttaggatgatttgtaagacatccatttgatgtaattaaatcctaata 41525689  T
Q  265 gtgaaacaacaatgaag 281  Q
    || |||||  |||||||    
T  41525688 gtaaaacataaatgaag 41525672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 337
Target Start/End: Original strand, 14600845 - 14601013
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttc-acttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaat 263  Q
    ||||||||||||||||||||||||     |||||||||||| || |||||  || ||| |||||||||||| ||   | ||||||||||||| |||||||    
T  14600845 aagcatgtgcagagctgaacattc-----atcagaatgttccatttgtttttacataggatgatttgtaagacttgtacttgatgtaatcaa-tcctaat 14600938  T
Q  264 agtgaaacaacaat-gaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtatttca 337  Q
    |||||||  | ||| |||| | ||| |||||||||||||||||||||||| | ||||||||||| ||||| ||||    
T  14600939 agtgaaaacataattgaagtgcagtaattgcaacatctaggatgatattcacattggaatattcttagtacttca 14601013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 26458232 - 26458170
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||| ||||||||||||||||    
T  26458232 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaactcctaatagtgaaaca 26458170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 522402 - 522464
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  522402 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 522464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 17421506 - 17421568
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | ||||||||||||| ||||||||||||||||    
T  17421506 tgtttcacttaggatgatttgtaagacttgtaattgatgtaatcaattcctaatagtgaaaca 17421568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 17828769 - 17828816
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  17828769 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 17828816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 17838160 - 17838207
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  17838160 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 17838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 30651445 - 30651390
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatag 265  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||||| |||||||    
T  30651445 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaattctaatag 30651390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 7846988 - 7847073
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||| | |||  | ||||| | ||||| |||| |||||||||  |||||||| |||||||||||||||||    
T  7846988 atgtaatcaaa-cctaatagtaagacacaactgaagtgcagtgaatgcatcatctaggacaatattctcattggaatattcctagta 7847073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 16211451 - 16211489
Alignment:
Q  294 aacatctaggatgatattctctttggaatattcctagta 332  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  16211451 aacatctaggataatattctcattggaatattcctagta 16211489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 16058126 - 16058066
Alignment:
Q  212 tttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    ||||| |||| ||||||||||||  |   ||||||||||||||||||||||||||| ||||    
T  16058126 tttcaattaggatgatttgtaagattcttatttgatgtaatcaaatcctaatagtggaaca 16058066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 6e-59; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 791702 - 791499
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  791702 ttttgcttttcacctactgtactgttcataaaataagcatgtgcagagcttgaacattctgaacatcagaatgttccatctgtttcacttaggatgattt 791603  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | || ||||  ||||||||||||||||||| ||| ||||||||||||    
T  791602 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagagattttaacatctaggatgatattcccttgtggaatattcct 791503  T
Q  329 agta 332  Q
    ||||    
T  791502 agta 791499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 137 - 337
Target Start/End: Complemental strand, 17268801 - 17268599
Alignment:
Q  137 cttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttgtaagg 235  Q
    |||||||||||||||| |||||| |    ||||||||||||||||||||||||| | ||||||||||||| | | ||||||||||| ||||||||||||     
T  17268801 cttttcacctactgtactgttcataaagtaagcatgtgcagagctgaacattctgaccatcagaatgttccttttgtttcacttaggatgatttgtaaga 17268702  T
Q  236 ctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattcctagtatt 334  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | ||||| | |||||||||||||||||||| | ||||||||||||| |||| |    
T  17268701 ctaccatttgatgtaatcaaatcctaataatgaaacaacaatgaagagcagtgacttcaacatctaggatgatattcccttttggaatattcccagtact 17268602  T
Q  335 tca 337  Q
    |||    
T  17268601 tca 17268599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 332
Target Start/End: Complemental strand, 7757723 - 7757526
Alignment:
Q  137 cttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaagg 235  Q
    ||||||||||| ||| ||||||| |    ||||||||||||||||||||||| | | ||||||||||||| |||||||| |||||| ||||||||||||     
T  7757723 cttttcacctattgtcttgttcataaagtaagcatgtgcagagctgaacattttgaccatcagaatgttccatctgttttacttaggatgatttgtaaga 7757624  T
Q  236 ctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| | | ||||   || |||||||||||||||| ||| ||||||||||||||||    
T  7757623 ctaccatttgatgtaatcaaatactaatagtgaaacgacaatgaagagcaatgatattaatatctaggatgatattcccttgtggaatattcctagta 7757526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 9325129 - 9325332
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  9325129 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 9325228  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  9325229 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 9325328  T
Q  329 agta 332  Q
    ||||    
T  9325329 agta 9325332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 21202907 - 21203110
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21202907 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21203006  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21203007 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21203106  T
Q  329 agta 332  Q
    ||||    
T  21203107 agta 21203110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 21213323 - 21213526
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21213323 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21213422  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21213423 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21213522  T
Q  329 agta 332  Q
    ||||    
T  21213523 agta 21213526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 21334264 - 21334061
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21334264 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21334165  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21334164 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21334065  T
Q  329 agta 332  Q
    ||||    
T  21334064 agta 21334061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 137 - 337
Target Start/End: Original strand, 2690390 - 2690592
Alignment:
Q  137 cttttcacctactgtattgttcacagt-taaagcatgtgcagagctgaacattctaaacatcagaatgtt-catctgtttcacttagaatgatttgtaag 234  Q
    ||||||||||| ||||||||||| ||| ||||||||||||| ||||||| ||||| | |||||||||||| ||| |||||||||||| ||||||||||||    
T  2690390 cttttcacctattgtattgttcatagtataaagcatgtgcatagctgaatattctgaccatcagaatgtttcatttgtttcacttaggatgatttgtaag 2690489  T
Q  235 gctaccatttgatgtaatcaaatcctaatagtgaaacaacaa-tgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtat 333  Q
     ||   ||||| ||||||||| ||||||||||||||  | || ||||| | |||||||| || |||||||||||||||||| |||||||||||||||||     
T  2690490 acttgtatttggtgtaatcaa-tcctaatagtgaaaatataactgaagtgcagtgattgtaatatctaggatgatattctcattggaatattcctagtac 2690588  T
Q  334 ttca 337  Q
    ||||    
T  2690589 ttca 2690592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 21997567 - 21997770
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21997567 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21997666  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||  ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21997667 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacagtaatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 21997766  T
Q  329 agta 332  Q
    ||||    
T  21997767 agta 21997770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 21988033 - 21988236
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||| ||| |||||||    
T  21988033 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacataggatgattt 21988132  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||  ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21988133 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacagtaatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 21988232  T
Q  329 agta 332  Q
    ||||    
T  21988233 agta 21988236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 337
Target Start/End: Original strand, 5867569 - 5867692
Alignment:
Q  214 tcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattct 313  Q
    |||||||| |||||||||||| ||  ||||| ||||||||||||||||||||||||||| | |||||| | | || ||| ||| ||||||||||||||||    
T  5867569 tcacttaggatgatttgtaagactctcatttaatgtaatcaaatcctaatagtgaaacatcgatgaagggcaatgtttgtaacgtctaggatgatattct 5867668  T
Q  314 ctttggaatattcctagtatttca 337  Q
      ||||||||||||||||| ||||    
T  5867669 tattggaatattcctagtacttca 5867692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 37816755 - 37816675
Alignment:
Q  201 atgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaag 281  Q
    |||||||| |||||||||||| |||||||||||| ||  |||||||||||||||||| |||||||||||||| ||||||||    
T  37816755 atgttcatttgtttcacttaggatgatttgtaagactctcatttgatgtaatcaaattctaatagtgaaacatcaatgaag 37816675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 37295762 - 37295701
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaac 271  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  37295762 tgtttcacttaggatgatttgtaagactaccatttgatataatcaaatcctaatagtgaaac 37295701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 18536506 - 18536406
Alignment:
Q  181 tgaacattctaaacatcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaa 280  Q
    ||||| |||| ||| |||||||||||   | |||||||||| |||||||||||  ||  |||||||||||||||||| |||||||||||||| |||||||    
T  18536506 tgaactttctgaacttcagaatgttcccttatttcacttaggatgatttgtaaaactctcatttgatgtaatcaaattctaatagtgaaacatcaatgaa 18536407  T
Q  281 g 281  Q
    |    
T  18536406 g 18536406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 14437259 - 14437197
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | ||||||||||||||||||||||||||||||    
T  14437259 tgtttcacttaggatgatttgtaagacttgtaattgatgtaatcaaatcctaatagtgaaaca 14437197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 26362544 - 26362603
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaa 269  Q
    |||||||||||| |||||||||||| ||   | |||||||||||||||||||||||||||    
T  26362544 tgtttcacttaggatgatttgtaagacttgtaattgatgtaatcaaatcctaatagtgaa 26362603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 22817577 - 22817513
Alignment:
Q  127 tttgcttttgctttt-cacctactgtattgttcacagttaaagcatgtgcagagctgaacattct 190  Q
    ||||||||||||||| |||||||||||||||||| |    ||||||||||| |||||||||||||    
T  22817577 tttgcttttgctttttcacctactgtattgttcataaagtaagcatgtgcaaagctgaacattct 22817513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 13674040 - 13673993
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  13674040 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 13673993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 14881960 - 14882007
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  14881960 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 14882007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 14894310 - 14894357
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  14894310 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 14894357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 329
Target Start/End: Original strand, 20531554 - 20531636
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattccta 329  Q
    ||||||||||| ||||||||| |||||  | ||||| | ||||| |||| |||||||||| |||||||| || |||||||||||    
T  20531554 atgtaatcaaa-cctaatagtaaaacacaactgaagtgcagtgaatgcatcatctaggataatattctcattagaatattccta 20531636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 33774404 - 33774451
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  33774404 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 33774451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 5759218 - 5759145
Alignment:
Q  259 ctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    |||||||| |||||  | ||||| | ||||| |||| |||||||||| |||||||| ||||||||||| |||||    
T  5759218 ctaatagtaaaacacaactgaagtgcagtgaatgcatcatctaggataatattctcattggaatattcttagta 5759145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 6e-59; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 2115966 - 2115763
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    |||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  2115966 ttttgcttttcacctactgtactgttcataaagtaagcatgtgcagagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 2115867  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||| ||||||||||||    
T  2115866 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattcct 2115767  T
Q  329 agta 332  Q
    ||||    
T  2115766 agta 2115763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 21886279 - 21886076
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    |||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21886279 ttttgcttttcacctactgtactgttcataaagtaagcatgtgcagagcttgaacattctgaccatcagaatgttccatctgtttcacttaggatgattt 21886180  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||| ||||||||||||    
T  21886179 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattcct 21886080  T
Q  329 agta 332  Q
    ||||    
T  21886079 agta 21886076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 8540216 - 8540014
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    |||||| |||||||||||||| |||||| |    |||||||||  |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  8540216 ttttgcctttcacctactgtactgttcataaagtaagcatgtgttgagctgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttg 8540117  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||   ||||||||||||||||||| ||| |||||||||||||    
T  8540116 taagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtgatattaacatctaggatgatattcccttgtggaatattccta 8540017  T
Q  330 gta 332  Q
    |||    
T  8540016 gta 8540014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 138 - 311
Target Start/End: Original strand, 41544211 - 41544386
Alignment:
Q  138 ttttcacctactgtattgttcacagtta-aagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaagg 235  Q
    |||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||||||     
T  41544211 ttttcaccaactatattgttcatagttagaagcatgtgcagagctgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaaga 41544310  T
Q  236 ctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt 311  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | ||||||   ||||||||||||||||||    
T  41544311 ctaccatttgatgtaatcaaatcctaatagtgaaacaacactgaagagcagtgatattaacatctaggatgatatt 41544386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 132 - 337
Target Start/End: Original strand, 1186520 - 1186722
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttg 230  Q
    |||||||||||||||| |||| | ||||    |||||||||||  |||||||||||||| | ||||||||||||| | | ||||||||||  ||||||||    
T  1186520 ttttgcttttcacctattgtactattca----taaagcatgtgttgagctgaacattctgatcatcagaatgttccttttgtttcacttatgatgatttg 1186615  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctag 330  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||| | || ||||| |||||||||||||||||||||||||||||||| ||||    
T  1186616 taagacttccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagagattgtaacatctaggatgatattctctttggaatatttctag 1186715  T
Q  331 tatttca 337  Q
    || ||||    
T  1186716 tacttca 1186722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 30549700 - 30549903
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||| ||||||||||| |||||| |    |||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||  |||||||    
T  30549700 ttttgctttccacctactgtactgttcataaagtaagcatgtgcagagcttgaacattctgatcatcagaatgttccatctgtttcacttaagatgattt 30549799  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||| ||||||||| ||| ||||||||||||    
T  30549800 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctagcatgatattcccttgtggaatattcct 30549899  T
Q  329 agta 332  Q
    ||||    
T  30549900 agta 30549903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 8605455 - 8605253
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    |||||| |||||||||||||| |||||| |    |||||||||  |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  8605455 ttttgcctttcacctactgtactgttcataaagtaagcatgtgttgagctgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttg 8605356  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| ||||||||||||||||||||||||||||| | |||||||||||||| | ||||||   ||||||||||||||||||| ||| |||||||||||||    
T  8605355 taagactaccatttgatgtaatcaaatcctaatacttaaacaacaatgaagagcagtgatattaacatctaggatgatattcccttgtggaatattccta 8605256  T
Q  330 gta 332  Q
    |||    
T  8605255 gta 8605253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 42034160 - 42033954
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  42034160 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttg 42034061  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgat----tgcaacatctaggatgatattctctt-tggaatatt 325  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||       ||||||||||||||||||| ||| |||||||||    
T  42034060 taagactaccatctgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtgatattaattaacatctaggatgatattcccttgtggaatatt 42033961  T
Q  326 cctagta 332  Q
    |||||||    
T  42033960 cctagta 42033954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 166 - 332
Target Start/End: Complemental strand, 13964826 - 13964658
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaata 264  Q
    ||||||||||||||||||||||| | | ||||||||||||| ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  13964826 aagcatgtgcagagctgaacattttgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccattagatgtaatcaaatcctaata 13964727  T
Q  265 gtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    ||||||||||||||||| | ||||||   ||| ||||||||||||||| ||| ||||||||||||||||    
T  13964726 gtgaaacaacaatgaagagcagtgatattaacctctaggatgatattcccttgtggaatattcctagta 13964658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 132 - 337
Target Start/End: Complemental strand, 25019434 - 25019226
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  25019434 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctaatcatcagaatgttccatctgtttcacttaggatgattt 25019335  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  |||||| | ||||||   ||||||||||||||||||| ||| || |||||||||    
T  25019334 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgataataacatctaggatgatattcccttgtgaaatattcct 25019235  T
Q  329 agtatttca 337  Q
    |||| ||||    
T  25019234 agtacttca 25019226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 16154849 - 16154646
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  16154849 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 16154750  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  16154749 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 16154650  T
Q  329 agta 332  Q
    ||||    
T  16154649 agta 16154646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 21458594 - 21458391
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21458594 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21458495  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21458494 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21458395  T
Q  329 agta 332  Q
    ||||    
T  21458394 agta 21458391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 210 - 337
Target Start/End: Complemental strand, 34822911 - 34822784
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgata 309  Q
    |||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||||| ||||||    
T  34822911 tgtttcacttaggatgatttgtaagactatcatttgatgtaatcaaatcctaatagtgaaacaacaatgaagtgcagtgtttgtaacatctagtatgata 34822812  T
Q  310 ttctctttggaatattcctagtatttca 337  Q
    |||||||| |||||||||||||| ||||    
T  34822811 ttctctttagaatattcctagtacttca 34822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 166 - 337
Target Start/End: Complemental strand, 18383292 - 18383119
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaata 264  Q
    ||||||||| ||||||||||||||| | |||||||| |||| | | ||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||    
T  18383292 aagcatgtgtagagctgaacattctgaccatcagaacgttccttttgtttcacttaggatgatttgtaagactatcatttgatgtaattaaatcctaata 18383193  T
Q  265 gtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattcctagtatttca 337  Q
    ||||||||||||||||| | ||||| |  ||||||||||||||||||| | ||||||||||| |||||| ||||    
T  18383192 gtgaaacaacaatgaagagcagtgaatttaacatctaggatgatattcccttttggaatatttctagtacttca 18383119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 138 - 325
Target Start/End: Original strand, 18062322 - 18062511
Alignment:
Q  138 ttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt-catctgtttcacttagaatgatttgtaaggc 236  Q
    ||||||||||||||| |||||| |    ||||||||||||||||||||||||| | |||||||||||| | | |||||||||||| || ||||||||| |    
T  18062322 ttttcacctactgtactgttcataaagtaagcatgtgcagagctgaacattctgaccatcagaatgtttcttttgtttcacttaggattatttgtaagac 18062421  T
Q  237 taccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatatt 325  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||| | |||||||  ||||| || |||||||||| | |||||||||||    
T  18062422 taccatttgatgtaatcaaattctaacagtggaacaacaatgaagagcagtgattttaacatataagatgatattcccttttggaatatt 18062511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 138 - 337
Target Start/End: Original strand, 2370509 - 2370710
Alignment:
Q  138 ttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttgtaaggc 236  Q
    ||||||||||||||| |||||| |    |||||||||||| | |||||| ||| | ||||| ||||||| | | ||||||||||  ||||||| |||| |    
T  2370509 ttttcacctactgtactgttcataaagtaagcatgtgcagtgttgaacactctgatcatcaaaatgttctttttgtttcacttatgatgatttataagac 2370608  T
Q  237 taccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattcctagtattt 335  Q
    |||||||||||||||||||||||||||||||||| |||||||||| | | |||||  ||||||||||||||||||| | ||||||||||| |||||| ||    
T  2370609 taccatttgatgtaatcaaatcctaatagtgaaaaaacaatgaagagcaatgattttaacatctaggatgatattcccttttggaatatttctagtactt 2370708  T
Q  336 ca 337  Q
    ||    
T  2370709 ca 2370710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 137 - 337
Target Start/End: Complemental strand, 22956516 - 22956314
Alignment:
Q  137 cttttcacctactgtattgttcacagt-taaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaag 234  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||||||| | |   | ||||||||| || |||||||||||| ||||||||||||    
T  22956516 cttttcacctactgtactgttcacagtataaagcatgtgcacagctgaacattttgactgttagaatgttccatttgtttcacttaggatgatttgtaag 22956417  T
Q  235 gctaccatttgatgtaatcaaatcctaatagtgaaacaacaa-tgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtat 333  Q
     ||   ||||||||||| ||| ||||||||||||||  | || ||||| | |||||||||||||||||||||||||||||  ||||||||||| |||||     
T  22956416 acttgtatttgatgtaaacaa-tcctaatagtgaaaacataactgaagtgcagtgattgcaacatctaggatgatattcttattggaatattcttagtac 22956318  T
Q  334 ttca 337  Q
    ||||    
T  22956317 ttca 22956314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 1982255 - 1982314
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaa 269  Q
    ||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||    
T  1982255 tgtttcacttagaatgatttgtaagacttgtatttgatgtaatcaaatcctaatagtgaa 1982314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 1969174 - 1969100
Alignment:
Q  259 ctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    ||||||||||||||||||||||| | ||||||   ||||||||||||||||||| ||| ||||||||||||||||    
T  1969174 ctaatagtgaaacaacaatgaagagcagtgatattaacatctaggatgatattcccttgtggaatattcctagta 1969100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 13403707 - 13403792
Alignment:
Q  67 tgaacagtacctgctcccttatgtgtctaattctaattgaatatgactttgaggttcctttttgcttttgcttttcacctactgta 152  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||||   |  | | ||||||||||||||||||||| ||||||    
T  13403707 tgaacaatacctcctcccttatgtgtctaattctaattgaataagactagaacttgcttttttgcttttgcttttcaccaactgta 13403792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 1989673 - 1989732
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaa 269  Q
    |||||||||||| |||||||||||| ||   |||||||||||||||||||||||||||||    
T  1989673 tgtttcacttaggatgatttgtaagacttgtatttgatgtaatcaaatcctaatagtgaa 1989732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 332
Target Start/End: Complemental strand, 22960800 - 22960631
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttcatctgtttc--actt-agaatgatttgtaaggctaccatttgatgtaatcaaatcctaa 262  Q
    |||||||||||||| | |||||||| | ||||||||||||| | |  |||  |||| || |||||||||||| ||  | ||| |||||||||| || |||    
T  22960800 aagcatgtgcagagattaacattctgaccatcagaatgttccttttgttcttactttaggatgatttgtaagacttacttttaatgtaatcaa-tcttaa 22960702  T
Q  263 tagtgaa-acaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    |||| || |||| | ||||| ||||||| ||||||||||||||| ||||| || |||||||| ||||||||    
T  22960701 tagtaaagacaaaactgaagtgtagtgaatgcaacatctaggataatattttcattggaataatcctagta 22960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 329
Target Start/End: Original strand, 52955473 - 52955592
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgata 309  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||||| ||||||||||||||   |||||| | || |     ||||||||||||||||    
T  52955473 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaattctaatagtgaaacatttatgaagtgcagcgtggaaaacatctaggatgata 52955572  T
Q  310 ttctctttggaatattccta 329  Q
    ||||   |||||||||||||    
T  52955573 ttcttaatggaatattccta 52955592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 18097206 - 18097253
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  18097206 agtgaatgcaacatctaggataatattctcattggaatattcctagta 18097253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 1974889 - 1974951
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  1974889 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 1974951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 41208413 - 41208351
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  41208413 tgtttcacttaggatgatttgtaagacttgtaatttatgtaatcaaatcctaatagtgaaaca 41208351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 20308656 - 20308609
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  20308656 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 20308609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 20314340 - 20314293
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  20314340 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 20314293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 20318317 - 20318364
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  20318317 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 20318364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 25868068 - 25868021
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  25868068 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 25868021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 50941059 - 50941008
Alignment:
Q  200 aatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaa 251  Q
    ||||||||| |||||||||||| || ||||||||| || |||||||||||||    
T  50941059 aatgttcatttgtttcacttaggataatttgtaagacttccatttgatgtaa 50941008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 26193675 - 26193760
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||| | |||  | ||||| | ||||| |||  |||||||||| |||||||| |||||||||||||||||    
T  26193675 atgtaatcaaa-cctaatagtaagacataactgaagtgcagtgaatgcgtcatctaggataatattctcattggaatattcctagta 26193760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 30210927 - 30210869
Alignment:
Q  200 aatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatc 258  Q
    ||||||||| ||||||  |||| |||||||||||| ||  |||||||||||||||||||    
T  30210927 aatgttcatttgtttctattaggatgatttgtaagactttcatttgatgtaatcaaatc 30210869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 337
Target Start/End: Original strand, 21821585 - 21821759
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttcatctgtttc--ac-ttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaa 262  Q
    |||||||||||||| |||||||||||| | ||||||||||| | | ||||  || |||| |||||||||||| ||  | |||| ||||||| ||||||||    
T  21821585 aagcatgtgcagagatgaacattctaaccttcagaatgttcctttttttcttactttaggatgatttgtaagacttacttttgttgtaatc-aatcctaa 21821683  T
Q  263 tagt---gaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtatttca 337  Q
    ||||   || ||||||  |||| | ||  |||| ||  |||||||  |||| ||||||||||||||||||||| ||||    
T  21821684 tagtaaagacacaaca--gaagtgcagcaattgtaatttctaggacaatatcctctttggaatattcctagtacttca 21821759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 310122 - 310324
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||| || |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  310122 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttg 310221  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||| |||||||||||||    
T  310222 taagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattccta 310321  T
Q  330 gta 332  Q
    |||    
T  310322 gta 310324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 337
Target Start/End: Complemental strand, 216533 - 216365
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttc-acttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaat 263  Q
    ||||||||||||||||||||||||     |||||||||||| || |||||  || ||| |||||||||||| ||   | ||||||||||||| |||||||    
T  216533 aagcatgtgcagagctgaacattc-----atcagaatgttccatttgtttttacataggatgatttgtaagacttgtacttgatgtaatcaa-tcctaat 216440  T
Q  264 agtgaaacaacaat-gaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtatttca 337  Q
    |||||||  | ||| |||| | ||| |||||||||||||||||||||||| | ||||||||||| ||||| ||||    
T  216439 agtgaaaacataattgaagtgcagtaattgcaacatctaggatgatattcacattggaatattcttagtacttca 216365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 14791568 - 14791366
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||| || |||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||    
T  14791568 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctaaccatcataatgttccatctgtttcacttaggatgatttg 14791469  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||| |||||||||||||    
T  14791468 taagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattccta 14791369  T
Q  330 gta 332  Q
    |||    
T  14791368 gta 14791366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 132 - 337
Target Start/End: Original strand, 27787664 - 27787871
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||  | |||| |    ||||||||||||||||||||||||| | ||||||||||||| | | ||||||||||| ||||||||    
T  27787664 ttttgcttttcacctactgttctattcataaagtaagcatgtgcagagctgaacattctgatcatcagaatgttccttttgtttcacttaggatgatttg 27787763  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattccta 329  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| | |||||||||||||||    
T  27787764 taagactaccatttgatgtaatcatatcctaatagtgaaacaacaatgaagagcagtgattgtaacatctaggatgatattcccttttggaatattccta 27787863  T
Q  330 gtatttca 337  Q
    ||| ||||    
T  27787864 gtacttca 27787871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 29540422 - 29540220
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||| || |||||||||||| ||||||||    
T  29540422 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgttccatttgtttcacttaggatgatttg 29540323  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||   ||||||||||||||||||| ||| ||| |||||||||    
T  29540322 taagactaccatttgatgtaatcaaattctaatagtgaaacaagaatgaagagtaatgatgttaacatctaggatgatattcccttgtgggatattccta 29540223  T
Q  330 gta 332  Q
    |||    
T  29540222 gta 29540220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 18201181 - 18200980
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    |||||||||||||||| ||||||||||| |    ||||||| |  |||||||||||||| | ||||||||||||| |||||| |||||||| ||||||||    
T  18201181 ttttgcttttcacctattgtattgttcataaagtaagcatgagttgagctgaacattctgaccatcagaatgttccatctgtatcacttaggatgatttg 18201082  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||| | ||||||   ||||||||||||||||||| ||| |||||||||||||    
T  18201081 taagactacc-tttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtgatattaacatctaggatgatattcccttgtggaatattccta 18200983  T
Q  330 gta 332  Q
    |||    
T  18200982 gta 18200980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 14045279 - 14045077
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||| ||||||| ||||||||||||||| ||||||||    
T  14045279 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcataatgttccatctgtttcacttaggatgatttg 14045180  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    | || ||| | |||||||||||||||||||||||||||||||||||||||    ||||||   ||||||||||||||||||| ||| |||||||||||||    
T  14045179 tgagactatcttttgatgtaatcaaatcctaatagtgaaacaacaatgaaaaacagtgatattaacatctaggatgatattcccttgtggaatattccta 14045080  T
Q  330 gta 332  Q
    |||    
T  14045079 gta 14045077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 24922096 - 24922298
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||| || |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  24922096 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttg 24922195  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| ||| ||||||||||||||||||||||||||||||||||  |||||| | ||| ||   ||||||||||||||||||| ||| || ||||||||||    
T  24922196 taagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattcccttgtgaaatattccta 24922295  T
Q  330 gta 332  Q
    |||    
T  24922296 gta 24922298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 24931132 - 24931334
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||| || |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  24931132 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttg 24931231  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| ||| ||||||||||||||||||||||||||||||||||  |||||| | ||| ||   ||||||||||||||||||| ||| || ||||||||||    
T  24931232 taagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattcccttgtgaaatattccta 24931331  T
Q  330 gta 332  Q
    |||    
T  24931332 gta 24931334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 12455019 - 12454816
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  12455019 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 12454920  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  12454919 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 12454820  T
Q  329 agta 332  Q
    ||||    
T  12454819 agta 12454816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 16897912 - 16897709
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  16897912 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttagaatgattt 16897813  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||   ||||||   |||||||||||||||||| || | || |||||||||    
T  16897812 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagaacagtgataataacatctaggatgatattcctttgtgaaatattcct 16897713  T
Q  329 agta 332  Q
    ||||    
T  16897712 agta 16897709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 16908565 - 16908362
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  16908565 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttagaatgattt 16908466  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||   ||||||   |||||||||||||||||| || | || |||||||||    
T  16908465 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagaacagtgataataacatctaggatgatattcctttgtgaaatattcct 16908366  T
Q  329 agta 332  Q
    ||||    
T  16908365 agta 16908362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 20912248 - 20912045
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  20912248 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 20912149  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  20912148 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 20912049  T
Q  329 agta 332  Q
    ||||    
T  20912048 agta 20912045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 18160027 - 18159824
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| |||||||||||||||  ||||||    
T  18160027 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggctgattt 18159928  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  18159927 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 18159828  T
Q  329 agta 332  Q
    ||||    
T  18159827 agta 18159824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 18169839 - 18169636
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| |||||||||||||||  ||||||    
T  18169839 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggctgattt 18169740  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  18169739 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 18169640  T
Q  329 agta 332  Q
    ||||    
T  18169639 agta 18169636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 31357526 - 31357323
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| |||||||||||||||  ||||||    
T  31357526 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggctgattt 31357427  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  31357426 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 31357327  T
Q  329 agta 332  Q
    ||||    
T  31357326 agta 31357323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 31367254 - 31367051
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| |||||||||||||||  ||||||    
T  31367254 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggctgattt 31367155  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  31367154 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 31367055  T
Q  329 agta 332  Q
    ||||    
T  31367054 agta 31367051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 3285811 - 3285608
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  3285811 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 3285712  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  |||||| | ||| |    ||||||||||||||||||  ||| || |||||||||    
T  3285711 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaaaactaacatctaggatgatatttccttgtgaaatattcct 3285612  T
Q  329 agta 332  Q
    ||||    
T  3285611 agta 3285608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 288
Target Start/End: Complemental strand, 28092543 - 28092391
Alignment:
Q  137 cttttcacctactgtattgttcacagt-taaagcatgtgcagagctgaacattctaaacatcagaatgttcatctgtttcacttagaatgatttgtaagg 235  Q
    ||||||||| ||||||||||||||| | | |||||||||  || ||||||||||| ||| |||||| |||| | | |||||||||| || || ||||||     
T  28092543 cttttcaccgactgtattgttcacattcttaagcatgtgttgaactgaacattctgaacttcagaaagttcctttatttcacttaggattatgtgtaaga 28092444  T
Q  236 ctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtg 288  Q
    ||  ||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  28092443 ctctcatttgatgtaatcaaatcctaatagtgaaacatcaatgaagtgtagtg 28092391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 313
Target Start/End: Original strand, 9761601 - 9761733
Alignment:
Q  181 tgaacattctaaacatcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaa 280  Q
    ||||| |||| ||| ||||||||||||||| |||||||||| ||||||||||||  | | |||||||||||||||||| ||| ||| ||||| |||||||    
T  9761601 tgaaccttctgaacttcagaatgttcatctatttcacttaggatgatttgtaagatttctatttgatgtaatcaaatcttaacagtaaaacatcaatgaa 9761700  T
Q  281 gcgtagtgattgcaacatctaggatgatattct 313  Q
    | | ||||  |  ||||||||||||||||||||    
T  9761701 gtgcagtgtgtataacatctaggatgatattct 9761733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 22223775 - 22223837
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | ||||||||||||||||||||||||||||||    
T  22223775 tgtttcacttaggatgatttgtaagacttttaattgatgtaatcaaatcctaatagtgaaaca 22223837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 22249610 - 22249672
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | ||||||||||||||||||||||||||||||    
T  22249610 tgtttcacttaggatgatttgtaagacttttaattgatgtaatcaaatcctaatagtgaaaca 22249672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 26020848 - 26020921
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||    
T  26020848 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgtt 26020921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 16321096 - 16321049
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  16321096 agtgaatgcatcatctaggatgatattctcattggaatattcctagta 16321049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 16333244 - 16333197
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  16333244 agtgaatgcatcatctaggatgatattctcattggaatattcctagta 16333197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 1596772 - 1596698
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagc-tgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| |||||| |    ||||||||||||||| |||||||||| | ||||||||||||    
T  1596772 ttttgcttttcacctactgtactgttcataaagtaagcatgtgcagagcttgaacattctgatcatcagaatgtt 1596698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 8563425 - 8563487
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | |||||||||||||||||||||| |||||||    
T  8563425 tgtttcacttaggatgatttgtaagactcttaattgatgtaatcaaatcctaatattgaaaca 8563487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 26161731 - 26161646
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    |||||||||| || ||||||| |||||  | ||||| | ||||| |||| |||||||||| |||||||| |||||||||||||||||    
T  26161731 atgtaatcaactc-taatagtaaaacacaactgaagtgcagtgaatgcatcatctaggattatattctcattggaatattcctagta 26161646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 34765213 - 34765151
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  34765213 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 34765151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 791500 - 791541
Alignment:
Q  291 tgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  791500 tgcatcatctaggatgatattctcattggaatattcctagta 791541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 26021378 - 26021425
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  26021378 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 26021425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 1596280 - 1596195
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||| | |||  | ||||| | ||||| |||| |||||||||| |||||||| ||| |||||||||||||    
T  1596280 atgtaatcaaa-cctaatagtaagacacaactgaagtgcagtgaatgcatcatctaggataatattctcattgaaatattcctagta 1596195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 24361878 - 24361931
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaat 263  Q
    |||||||||||| |||||||||||| ||   | |||||||||||||||||||||    
T  24361878 tgtttcacttaggatgatttgtaagacttttaattgatgtaatcaaatcctaat 24361931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 25508815 - 25508737
Alignment:
Q  61 tgatactgaacagtacctgctcccttatgtgtctaattctaattgaatatgactttgaggttcctttttgcttttgctttt 141  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||| |||  ||||  || | ||||||||||||||||    
T  25508815 tgatactgaac-gtatatgctcccttatgtgtctaattataattgaatctga-attgatcttgcattttgcttttgctttt 25508737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 26022257 - 26022179
Alignment:
Q  61 tgatactgaacagtacctgctcccttatgtgtctaattctaattgaatatgactttgaggttcctttttgcttttgctttt 141  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||| |||  ||||  || | ||||||||||||||||    
T  26022257 tgatactgaac-gtatatgctcccttatgtgtctaattataattgaatctga-attgatcttgcattttgcttttgctttt 26022179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 12089 - 12292
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    |||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  12089 ttttgcttttcacctactgtactgttcataaaataagcatgtgcagagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 12188  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | | |||||  ||||||||||||||||||| ||| ||||||||||||    
T  12189 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcaatgattttaacatctaggatgatattcccttgtggaatattcct 12288  T
Q  329 agta 332  Q
    ||||    
T  12289 agta 12292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 10012330 - 10012532
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||| || |||||||||||||| | ||||||||||||| ||||||||||||||| | ||||||    
T  10012330 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctgaccatcagaatgttccatctgtttcacttaggacgatttg 10012429  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||  ||||||||||||||||||||||| |||||||||||||    
T  10012430 taagactaccatttgatgtaatcaaatcctaatggtgaaacaataatgaagagcagtgattttaacatctaggatgatattctcttgtggaatattccta 10012529  T
Q  330 gta 332  Q
    |||    
T  10012530 gta 10012532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 20492019 - 20491817
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  20492019 ttttgcttttcacctactgtactgttcataaagtaagcatgtgcagagctgaacattctgaccatcagaatgttccatctgtttcacttagcatgatttg 20491920  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||| | ||| ||   ||||||||||||||||||| ||| |||||||||||||    
T  20491919 taagactaccatttgatgtaatcaaatccaaatagtaaaacaacaatgaagagaagttatattaacatctaggatgatattcccttgtggaatattccta 20491820  T
Q  330 gta 332  Q
    |||    
T  20491819 gta 20491817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 55478145 - 55478349
Alignment:
Q  131 cttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||| |||||||||| |||| |||||| |    |||||||||  |||||||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  55478145 cttttgtttttcacctattgtactgttcataaagtaagcatgtgttgagctgaacattctgaccatcagaatgttccatctgtttcacttaggatgattt 55478244  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||   ||||||||||||||||||| ||| ||||||||||||    
T  55478245 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtgatattaacatctaggatgatattcccttgtggaatattcct 55478344  T
Q  329 agtat 333  Q
    |||||    
T  55478345 agtat 55478349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 16335544 - 16335746
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||| || |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  16335544 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttg 16335643  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  |||| |||||||||||| | ||| |||||||||||||    
T  16335644 taagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacacctaggatgatatccccttgtggaatattccta 16335743  T
Q  330 gta 332  Q
    |||    
T  16335744 gta 16335746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 137 - 332
Target Start/End: Original strand, 4024500 - 4024697
Alignment:
Q  137 cttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaagg 235  Q
    |||||||||||||||| ||| || |    ||||||||||||||||||||||| | | ||||||||||||| ||||||||||||||| ||||||||||||     
T  4024500 cttttcacctactgtactgtacataaagtaagcatgtgcagagctgaacattttgaccatcagaatgttccatctgtttcacttaggatgatttgtaaga 4024599  T
Q  236 ctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||||||| ||| ||||||||||||||||    
T  4024600 ctaccattagatgtaatcaaatcctaatagtgaaacaacaatgaagagtagtgatattaacctctaggatgatattcccttgtggaatattcctagta 4024697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 25432825 - 25432622
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  25432825 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 25432726  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||| ||||||| | ||||||   ||||||||||||||||||| ||| ||||||||||||    
T  25432725 gtaagactatcatttgatgtaatcaaatcctattagtgaaacaataatgaagagcagtgatattaacatctaggatgatattcccttgtggaatattcct 25432626  T
Q  329 agta 332  Q
    ||||    
T  25432625 agta 25432622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 1685353 - 1685556
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  1685353 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 1685452  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  1685453 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 1685552  T
Q  329 agta 332  Q
    ||||    
T  1685553 agta 1685556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 5655728 - 5655931
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  5655728 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 5655827  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  5655828 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 5655927  T
Q  329 agta 332  Q
    ||||    
T  5655928 agta 5655931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 8972812 - 8972609
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  8972812 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 8972713  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  8972712 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 8972613  T
Q  329 agta 332  Q
    ||||    
T  8972612 agta 8972609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 8983367 - 8983164
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  8983367 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 8983268  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  8983267 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 8983168  T
Q  329 agta 332  Q
    ||||    
T  8983167 agta 8983164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 9537101 - 9536898
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  9537101 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 9537002  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  9537001 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 9536902  T
Q  329 agta 332  Q
    ||||    
T  9536901 agta 9536898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 9547427 - 9547224
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  9547427 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 9547328  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  9547327 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 9547228  T
Q  329 agta 332  Q
    ||||    
T  9547227 agta 9547224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 6422267 - 6422065
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||| || ||| |||||||||| | ||||| ||||||| ||||||||||||||| ||||||||    
T  6422267 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagttgaacattctgatcatcaaaatgttccatctgtttcacttaggatgatttg 6422168  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| ||| ||||||||||||||||||||||||||||||||||  |||||| | ||| ||   ||||||||||||||||||| ||| || ||||||||||    
T  6422167 taagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattcccttgtgaaatattccta 6422068  T
Q  330 gta 332  Q
    |||    
T  6422067 gta 6422065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 133 - 332
Target Start/End: Complemental strand, 6432706 - 6432505
Alignment:
Q  133 tttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgt 231  Q
    |||||||||||||||||||| |||||| |    ||||||| || |||||||||||||| | ||| ||||||||| ||||||||||||||| |||||||||    
T  6432706 tttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctgatcattagaatgttccatctgtttcacttaggatgatttgt 6432607  T
Q  232 aaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctag 330  Q
    ||| ||| ||||||||||||||||||||||||||||||||||  |||||  | ||| ||   ||||||||||||||||||| ||| || |||||||||||    
T  6432606 aagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaaaagcagtaataataacatctaggatgatattcccttgtgaaatattcctag 6432507  T
Q  331 ta 332  Q
    ||    
T  6432506 ta 6432505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 4371343 - 4371140
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  4371343 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 4371244  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  |||||| | |||| |   ||||||||||||||||||| ||| || |||||||||    
T  4371243 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgctattaacatctaggatgatattcccttgtgaaatattcct 4371144  T
Q  329 agta 332  Q
    ||||    
T  4371143 agta 4371140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 4381062 - 4380859
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  4381062 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 4380963  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  |||||| | |||| |   ||||||||||||||||||| ||| || |||||||||    
T  4380962 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtgctattaacatctaggatgatattcccttgtgaaatattcct 4380863  T
Q  329 agta 332  Q
    ||||    
T  4380862 agta 4380859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 21542440 - 21542565
Alignment:
Q  187 ttctaaacatcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtag 286  Q
    |||| ||| ||||||||||| | |||||||||||| || ||||||||| ||  ||||| |||||||||||||||| ||||| |||| |||||||  ||||    
T  21542440 ttctgaacttcagaatgttcctttgtttcacttaggattatttgtaagactctcatttaatgtaatcaaatcctagtagtgtaacatcaatgaaatgtag 21542539  T
Q  287 tgattgcaacatctaggatgatattc 312  Q
    |   || |||||||||||||||||||    
T  21542540 tatgtgtaacatctaggatgatattc 21542565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 332
Target Start/End: Complemental strand, 12376461 - 12376291
Alignment:
Q  165 aaagcatgtgcagagctgaacattctaaacatcagaatgttcatctgtttc--actt-agaatgatttgtaaggctaccatttgatgtaatcaaatccta 261  Q
    |||||||||||| || |||||||||| | | ||||||||||| | |  |||  |||| || |||||||||||| ||  | |||||||||||||| |||||    
T  12376461 aaagcatgtgcaaagatgaacattctgaccttcagaatgttccttttgttcttactttaggatgatttgtaagacttacttttgatgtaatcaa-tccta 12376363  T
Q  262 atagtgaaacaacaa-tgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| ||   |||| ||||| | ||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  12376362 atagtaaagacacaactgaagtgcagtgaatgcaacatctaggataatattctcattggaatattcctagta 12376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 24793335 - 24793273
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||| ||| ||   ||||||||||||||||||||||||||||||||    
T  24793335 tgtttcacttaggatgatttgcaagactcttatttgatgtaatcaaatcctaatagtgaaaca 24793273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 2489306 - 2489379
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||    
T  2489306 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgtt 2489379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 17733996 - 17733934
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| || ||||||||| ||   |||||||||||||||||| |||||||||||||    
T  17733996 tgtttcacttaggataatttgtaagactcttatttgatgtaatcaaatcataatagtgaaaca 17733934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 19035265 - 19035203
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| || ||||||||| ||   |||||||||||||||||| |||||||||||||    
T  19035265 tgtttcacttaggataatttgtaagactcttatttgatgtaatcaaatcataatagtgaaaca 19035203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 49387558 - 49387620
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  49387558 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 49387620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 4782708 - 4782781
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    |||||||||||||||||| || |||||| |    |||||||||| |||||||||||||| | ||||||||||||    
T  4782708 ttttgcttttcacctactatactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgtt 4782781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 13119705 - 13119778
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| | |||| |    |||||||||| |||||||||||||| | ||||||||||||    
T  13119705 ttttgcttttcacctactgtactattcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgtt 13119778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 2489835 - 2489882
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  2489835 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 2489882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 4783244 - 4783291
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  4783244 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 4783291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 19828507 - 19828554
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  19828507 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 19828554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 20745339 - 20745386
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  20745339 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 20745386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 29709458 - 29709529
Alignment:
Q  200 aatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaac 271  Q
    |||||| || ||||| |||||||||  ||| |||| || |||||||||||||| ||||||||||||| ||||    
T  29709458 aatgttaatttgtttaacttagaatcttttataagacttccatttgatgtaattaaatcctaatagtaaaac 29709529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 13120196 - 13120281
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||| | |||  | ||||| | ||||| |||| |||||||||| |||||||| ||| |||||||||||||    
T  13120196 atgtaatcaaa-cctaatagtaagacacaactgaagtgcagtgaatgcatcatctaggataatattctcattgaaatattcctagta 13120281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 24873442 - 24873500
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtga 268  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||    
T  24873442 tgtttcacttaggatgatttgtaagacttgtaatttatgtaatcaaatcctaatagtga 24873500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 70095 - 70254
Alignment:
Q  31 atcttcaagccaatgctttaggaaattttatgatactgaacagtacctgctcccttatgtgtctaattctaattgaatatgactttgaggttcctttttg 130  Q
    ||||||| ||| |||||||| || ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| || |||||||    
T  70095 atcttcaggcccatgctttaagagattttctgatactgaacagtacatgctcccttatgtgtctaattcttattgaatatgactttgagcttgctttttg 70194  T
Q  131 cttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattct 190  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  70195 cttttgccttttacctactgtaatgttcacagttaaagcatgtgcagagctgaacattct 70254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 24696598 - 24696801
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttcat-ctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    |||||||||||||||| ||||||||| | ||||||||||||| | ||||||||||||| |||||||    
T  24696598 ttttgcttttcacctactgtactgttcataaagtaagcatgtgcagagcttgaacattctgatcatcagaatgttccttctgtttcacttaggatgattt 24696697  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||| ||||||||||||    
T  24696698 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattcct 24696797  T
Q  329 agta 332  Q
    ||||    
T  24696798 agta 24696801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 38957831 - 38958034
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||||| |    |||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  38957831 ttttgcttttcacctactgtactgttcataaagtaagcatgtgcagagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 38957930  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| ||||||| |  ||||||  ||||||||| ||||||||| ||| ||||||||| ||    
T  38957931 gtaagactaccatttgatataatcaaatcctaatagtgaaacaataatgaagagcggtgattttaacatctagaatgatattcccttgtggaatatttct 38958030  T
Q  329 agta 332  Q
    ||||    
T  38958031 agta 38958034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 38930494 - 38930698
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct--gaacattctaaacatcagaatgttc-atctgtttcacttagaatgatt 228  Q
    ||||||||||||| ||||||| |||||| |    |||||||| |||||||  ||||||||| | ||||||||||||| ||||||||||||||| ||||||    
T  38930494 ttttgcttttcacatactgtactgttcataaagtaagcatgtacagagctttgaacattctgatcatcagaatgttccatctgtttcacttaggatgatt 38930593  T
Q  229 tgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcc 327  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| ||||||| | | |||||  ||||||||||||||||||||||| || ||||||||    
T  38930594 tgtaagactaccatttgatgtaatcaaatcctaatagtgaagcaataatgaagagcaatgattttaacatctaggatgatattctcttgtgaaatattcc 38930693  T
Q  328 tagta 332  Q
    |||||    
T  38930694 tagta 38930698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 195 - 337
Target Start/End: Original strand, 72294 - 72436
Alignment:
Q  195 atcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgca 294  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| |||| | ||||||||||    
T  72294 atcaaaatgttcatttgtttcacttagaatgatttgtaagactaccatttgatgtaattaaatcctaatagtgaaacagcaacgaagagcagtgattgca 72393  T
Q  295 acatctaggatgatattctctttggaatattcctagtatttca 337  Q
    ||||||| |||||||||||||||| ||||| ||||||| ||||    
T  72394 acatctaagatgatattctctttgaaatatccctagtacttca 72436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 29423330 - 29423188
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    |||||||||||||||||||||||||||| |    |||||||||| |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  29423330 ttttgcttttcacctactgtattgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgttccatctgtttcacttaggatgatttg 29423231  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaa 273  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  29423230 taagactaccatttgatgtaatcaaatcctaatagtgaaacaa 29423188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 45014698 - 45014495
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| ||||||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  45014698 ttttgcttttcacctactatattgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 45014599  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  45014598 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 45014499  T
Q  329 agta 332  Q
    ||||    
T  45014498 agta 45014495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 2998710 - 2998913
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  2998710 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 2998809  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  2998810 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 2998909  T
Q  329 agta 332  Q
    ||||    
T  2998910 agta 2998913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 9502774 - 9502977
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  9502774 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 9502873  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  9502874 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 9502973  T
Q  329 agta 332  Q
    ||||    
T  9502974 agta 9502977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 9514140 - 9514343
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  9514140 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 9514239  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  9514240 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 9514339  T
Q  329 agta 332  Q
    ||||    
T  9514340 agta 9514343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 18651184 - 18650981
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  18651184 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 18651085  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  18651084 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 18650985  T
Q  329 agta 332  Q
    ||||    
T  18650984 agta 18650981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 18663302 - 18663099
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  18663302 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 18663203  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  18663202 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 18663103  T
Q  329 agta 332  Q
    ||||    
T  18663102 agta 18663099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 45024775 - 45024572
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  45024775 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 45024676  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  45024675 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 45024576  T
Q  329 agta 332  Q
    ||||    
T  45024575 agta 45024572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 4458161 - 4457958
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| ||||||||||||||| |||||||    
T  4458161 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggatgattt 4458062  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  4458061 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 4457962  T
Q  329 agta 332  Q
    ||||    
T  4457961 agta 4457958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 4467786 - 4467583
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| ||||||||||||||| |||||||    
T  4467786 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggatgattt 4467687  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  4467686 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 4467587  T
Q  329 agta 332  Q
    ||||    
T  4467586 agta 4467583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 17488656 - 17488453
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | | ||||||||||| ||||||||||||||| |||||||    
T  17488656 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcgtcagaatgttccatctgtttcacttaggatgattt 17488557  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgata-ttctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||| |||| | || |||||||||    
T  17488556 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatatttctttgtgaaatattcct 17488457  T
Q  329 agta 332  Q
    ||||    
T  17488456 agta 17488453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 168 - 329
Target Start/End: Original strand, 44639076 - 44639238
Alignment:
Q  168 gcatgtgcagagctgaacattctaaacatcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtg 267  Q
    ||||||| ||||||||||||||| | ||||||||||||| | |||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||     
T  44639076 gcatgtggagagctgaacattctgaccatcagaatgttcctttgtttcacttaagatgatttgtaagactaccatttgatgtaatcaaatcctagtagtt 44639175  T
Q  268 aaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    ||||||||||  || | ||||||   ||||||||||||||||||| ||| |||||||||||||    
T  44639176 aaacaacaatatagagcagtgatattaacatctaggatgatattcccttgtggaatattccta 44639238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 5337148 - 5337351
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| |||||||||||||||  ||||||    
T  5337148 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggctgattt 5337247  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  5337248 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 5337347  T
Q  329 agta 332  Q
    ||||    
T  5337348 agta 5337351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 5347001 - 5347204
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| |  |||||||||||| |||||||||||||||  ||||||    
T  5347001 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgattatcagaatgttccatctgtttcacttaggctgattt 5347100  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  5347101 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 5347200  T
Q  329 agta 332  Q
    ||||    
T  5347201 agta 5347204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 329
Target Start/End: Original strand, 40409202 - 40409335
Alignment:
Q  196 tcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaa 295  Q
    ||||||| ||| | |||||||||||| | |||||||||| ||  |||||||||||||||||  |||||||||||||| |||||||| |||||   || ||    
T  40409202 tcagaatattcctttgtttcacttaggaagatttgtaagactctcatttgatgtaatcaaactctaatagtgaaacatcaatgaagtgtagtatgtgtaa 40409301  T
Q  296 catctaggatgatattctctttggaatattccta 329  Q
    ||||||||||||||||||   |||||||||||||    
T  40409302 catctaggatgatattcttgatggaatattccta 40409335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 24239139 - 24239239
Alignment:
Q  137 cttttcacctactgtattgttcacagt-taaagcatgtgcagagctgaacattctaaacatcagaatgtt-catctg-tttcacttagaatgatttgtaa 233  Q
    |||||||||||||||| |||||||||| | ||||||||||| ||||||||||||| | ||| |||||||| ||| || |||||||||| |||||||||||    
T  24239139 cttttcacctactgtactgttcacagtatgaagcatgtgcaaagctgaacattctgatcattagaatgttccatttgttttcacttaggatgatttgtaa 24239238  T
Q  234 g 234  Q
    |    
T  24239239 g 24239239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 19342167 - 19342105
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  19342167 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaaca 19342105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 23721797 - 23721735
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  23721797 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaaca 23721735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 12570410 - 12570325
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    |||||||||| || ||||||| |||||  | ||||| | ||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  12570410 atgtaatcaactc-taatagtaaaacacaactgaagtgcagtgaatgcaacatctaggataatattctcattggaatattcctagta 12570325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 22901970 - 22901908
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    ||||||| |||| |||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  22901970 tgtttcagttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaaca 22901908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 22908968 - 22909030
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   |||||||||||||||||||||||| |||||||    
T  22908968 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaataatgaaaca 22909030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 16902579 - 16902652
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||    
T  16902579 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgtt 16902652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 16995970 - 16996043
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||    
T  16995970 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgtt 16996043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 24239413 - 24239451
Alignment:
Q  289 attgcaacatctaggatgatattctctttggaatattcc 327  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  24239413 attgcaacatctaggatgatattctcattggaatattcc 24239451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 16135336 - 16135385
Alignment:
Q  223 atgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| ||||||||||||| |||| |||||||| |||||||||    
T  16135336 atgatttgtaagactaccatttgatgcaatcgaatcctaacagtgaaaca 16135385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 16327912 - 16327827
Alignment:
Q  196 tcagaatgttcatctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaag 281  Q
    ||||||||||| | ||||||| ||   |||||||||||| ||||||||||||| |||| ||||| || ||||||||| | ||||||    
T  16327912 tcagaatgttcctttgtttcagtttagatgatttgtaagactaccatttgatgcaatcgaatcccaacagtgaaacatcgatgaag 16327827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 329
Target Start/End: Original strand, 27160116 - 27160235
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattg-caacatctaggatgat 308  Q
    ||||| |||||| |||||||||||| ||   | || ||||||||||||||||||||||||||| | |||||| | ||  || |  |||||||||||||||    
T  27160116 tgttttacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatctatgaagtgcag-catggaaaacatctaggatgat 27160214  T
Q  309 attctctttggaatattccta 329  Q
    |||||   |||||||||||||    
T  27160215 attcttaatggaatattccta 27160235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 329
Target Start/End: Original strand, 27170485 - 27170604
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattg-caacatctaggatgat 308  Q
    ||||| |||||| |||||||||||| ||   | || ||||||||||||||||||||||||||| | |||||| | ||  || |  |||||||||||||||    
T  27170485 tgttttacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaacatctatgaagtgcag-catggaaaacatctaggatgat 27170583  T
Q  309 attctctttggaatattccta 329  Q
    |||||   |||||||||||||    
T  27170584 attcttaatggaatattccta 27170604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 574046 - 573999
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  574046 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 573999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 22687941 - 22687988
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||| |||||||| |||||||||||||||||    
T  22687941 agtgaatgcatcatctaggataatattctcattggaatattcctagta 22687988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 45190623 - 45190576
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  45190623 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 45190576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 92955 - 93158
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||||||||||||||||||| |||| | |    |||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  92955 ttttgcttttcacctactgtactgtttataaagtaagcatgtgcagagcttgaacattctgaccatcagaatgttccatctgtttcacttaggatgattt 93054  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattcct 328  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| | ||||||||||||||    
T  93055 gtaagactactatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttttggaatattcct 93154  T
Q  329 agta 332  Q
    ||||    
T  93155 agta 93158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 131 - 331
Target Start/End: Complemental strand, 15814 - 15612
Alignment:
Q  131 cttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||||||| |||||| |    ||||||| || |||||||||||||| | ||||||||||||| || |||||||||||| |||||||    
T  15814 cttttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctgaccatcagaatgttccatttgtttcacttaggatgattt 15715  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||| ||| ||| ||||||||||||    
T  15714 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatgttcccttgtggaatattcct 15615  T
Q  329 agt 331  Q
    |||    
T  15614 agt 15612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 8336 - 8133
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||| ||||||||||||||| |||||| |  | |||||||||||||||| ||||||||| |   ||||||||||| ||||||||||||||| |||||||    
T  8336 ttttgtttttcacctactgtactgttcataaattaagcatgtgcagagcttgaacattctgacggtcagaatgttccatctgtttcacttaggatgattt 8237  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcct 328  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||||||||||||||| ||| ||||||||||||    
T  8236 gtaagactaccatttgatgtaatcaaatcctaatagtgaaacaattatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattcct 8137  T
Q  329 agta 332  Q
    ||||    
T  8136 agta 8133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 21259 - 21461
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||| |||||||||| || | ||||||||    
T  21259 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgttccatctgtttcatttgggatgatttg 21358  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    ||||  ||||| ||||||||||||||||||||||||||||||| ||||||| | |||||||  ||||||||||||||||||| ||| |||||||||||||    
T  21359 taagaataccaattgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgattttaacatctaggatgatattcccttgtggaatattccta 21458  T
Q  330 gta 332  Q
    |||    
T  21459 gta 21461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 166 - 330
Target Start/End: Complemental strand, 31105343 - 31105177
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaata 264  Q
    ||||||||||||||||||||||| | | ||||||||||||| | | ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  31105343 aagcatgtgcagagctgaacattatgatcatcagaatgttccttttgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaata 31105244  T
Q  265 gtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcctag 330  Q
    ||||||||||||||||| |||||||||   ||||||||||||||||| || ||||||||| ||||||    
T  31105243 gtgaaacaacaatgaagagtagtgatttatacatctaggatgatattcctttttggaataatcctag 31105177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 22244679 - 22244477
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    |||||||||||||||||| || | |||| |    |||||||||||||||| |||||||| |  |||||||||||| ||||||||||||||| ||||||||    
T  22244679 ttttgcttttcacctactttacttttcataaagtaagcatgtgcagagctaaacattctgacgatcagaatgttccatctgtttcacttaggatgatttg 22244580  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| |||||||||||||||||||||||||||||||||||||| || |||| | ||||||   ||||| ||||||||||||  ||| |||||||||||||    
T  22244579 taagactaccatttgatgtaatcaaatcctaatagtgaaacaaaaacgaagagcagtgatattaacatttaggatgatatttccttgtggaatattccta 22244480  T
Q  330 gta 332  Q
    |||    
T  22244479 gta 22244477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 23378683 - 23378881
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||||||||||    |||||||||| | ||| |||||||| | | |||||||||| || | | ||||| ||||| ||||||||    
T  23378683 ttttgcttttcacctactgtattgttca----taaagcatgttctgagttgaacattatgatcatcagaatggtccttttgtttctcttaggatgatttg 23378778  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattccta 329  Q
    |||| || |||||||||||||||||||| |||||||||||||||||||||| | ||||| || ||||||||||||||||||| | ||| |||||||||||    
T  23378779 taagacttccatttgatgtaatcaaatcgtaatagtgaaacaacaatgaagagcagtgaatgtaacatctaggatgatattccctttttgaatattccta 23378878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 18361243 - 18361040
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  18361243 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 18361144  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  18361143 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 18361044  T
Q  329 agta 332  Q
    ||||    
T  18361043 agta 18361040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 21753409 - 21753206
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21753409 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21753310  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21753309 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21753210  T
Q  329 agta 332  Q
    ||||    
T  21753209 agta 21753206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 21762696 - 21762493
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  21762696 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 21762597  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  21762596 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 21762497  T
Q  329 agta 332  Q
    ||||    
T  21762496 agta 21762493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 26192096 - 26192299
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  26192096 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 26192195  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  26192196 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 26192295  T
Q  329 agta 332  Q
    ||||    
T  26192296 agta 26192299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 26202700 - 26202903
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  26202700 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 26202799  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  26202800 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 26202899  T
Q  329 agta 332  Q
    ||||    
T  26202900 agta 26202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 32070406 - 32070203
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  32070406 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 32070307  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  32070306 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 32070207  T
Q  329 agta 332  Q
    ||||    
T  32070206 agta 32070203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 33939283 - 33939080
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  33939283 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 33939184  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  33939183 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 33939084  T
Q  329 agta 332  Q
    ||||    
T  33939083 agta 33939080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 33949683 - 33949480
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  33949683 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 33949584  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  33949583 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 33949484  T
Q  329 agta 332  Q
    ||||    
T  33949483 agta 33949480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 8765460 - 8765642
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  8765460 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 8765559  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattc 312  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||||    
T  8765560 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattc 8765642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 11411204 - 11411386
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  11411204 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 11411303  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattc 312  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||||    
T  11411304 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattc 11411386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 18390200 - 18389997
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  18390200 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 18390101  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
     |||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  18390100 ctaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 18390001  T
Q  329 agta 332  Q
    ||||    
T  18390000 agta 18389997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 27412114 - 27411911
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    ||||| |||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  27412114 ttttgtttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 27412015  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  27412014 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgataataacatctaggatgatattcctttgtgaaatattcct 27411915  T
Q  329 agta 332  Q
    ||||    
T  27411914 agta 27411911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 137 - 337
Target Start/End: Original strand, 21484134 - 21484337
Alignment:
Q  137 cttttcacctactgtattgttcacagt-taaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgttt-cacttagaatgatttgtaa 233  Q
    |||||||||| ||||| |||||||||| ||||||||||||| ||||||||||| | | ||||||||||||| || ||||| ||| ||| |||||||||||    
T  21484134 cttttcaccttctgtactgttcacagtataaagcatgtgcatagctgaacattgtgatcatcagaatgttccatttgttttcacctaggatgatttgtaa 21484233  T
Q  234 ggctaccatttgatgtaatcaaatcctaatagtgaaacaacaa-tgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    | ||   ||||||||||||||| ||||||||||||||  | || ||||| | ||||||||||||||||| |||||||||||| |||||||||||| ||||    
T  21484234 gacttgtatttgatgtaatcaa-tcctaatagtgaaaacataactgaagtggagtgattgcaacatctaagatgatattctcattggaatattcccagta 21484332  T
Q  333 tttca 337  Q
     ||||    
T  21484333 cttca 21484337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 19548653 - 19548715
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  19548653 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtgaaaca 19548715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 281
Target Start/End: Complemental strand, 36316246 - 36316175
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaag 281  Q
    |||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||| |||| | ||||||    
T  36316246 tgtttcacttaggatgatttgtaagactcttatttgatgtaatcaaatcctaatagtggaacatcgatgaag 36316175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 37548547 - 37548620
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||    
T  37548547 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgtt 37548620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 37647941 - 37648014
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||    
T  37647941 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgtt 37648014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 4038411 - 4038496
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||||| | |  | ||||| | ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  4038411 atgtaatcaaa-cctaatagtgagatacaactgaagtgcagtgaatgcatcatctaggacaatattctctttggaatattcctagta 4038496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 20947677 - 20947615
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  20947677 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 20947615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 20958066 - 20958004
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  20958066 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 20958004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 31916636 - 31916551
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||| | |||  | ||||| | ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  31916636 atgtaatcaaa-cctaatagtaagacacaactgaagtgcagtgaatgcatcatctaggacaatattctctttggaatattcctagta 31916551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 42090948 - 42091033
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    |||||||||| || ||||||| |||||  | ||||| | | ||| ||||||||||||||| |||||||| |||||||||||||||||    
T  42090948 atgtaatcaactc-taatagtaaaacacaactgaagtgcaatgaatgcaacatctaggataatattctcattggaatattcctagta 42091033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 205794 - 205926
Alignment:
Q  137 cttttcacctactgtattgttcacagtta-aagcatgtgcagagctgaacattctaaacatcagaatg-ttcatctg-tttcac-ttagaatgatttgta 232  Q
    ||||||||| |||  | |||||| ||||| |||||||||||||| |||||||||| | |||||||||| ||||| || | | || |||| ||||||||||    
T  205794 cttttcaccaactacactgttcatagttagaagcatgtgcagagatgaacattctgaccatcagaatgtttcatttgctcttactttaggatgatttgta 205893  T
Q  233 aggctaccatttgatgtaatcaaatcctaatagt 266  Q
    || ||||  |||||||||||| ||||||||||||    
T  205894 agactactttttgatgtaatc-aatcctaatagt 205926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 22173719 - 22173766
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  22173719 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 22173766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 27274650 - 27274697
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| ||||||||||  |||||||||||||||||||||||||    
T  27274650 agtgaatgcatcatctaggatagtattctctttggaatattcctagta 27274697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 30944255 - 30944302
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  30944255 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 30944302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 30953677 - 30953724
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  30953677 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 30953724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 34130960 - 34131007
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  34130960 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 34131007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 37299284 - 37299331
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  37299284 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 37299331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 37549074 - 37549121
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  37549074 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 37549121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 37651872 - 37651919
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  37651872 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 37651919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 37817386 - 37817339
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  37817386 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 37817339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 19888785 - 19888870
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||| | |||  | ||||| | ||||| |||| |||||||||| |||||||| ||| |||||||||||||    
T  19888785 atgtaatcaaa-cctaatagtaagacacaactgaagtgcagtgaatgcatcatctaggataatattctcattgaaatattcctagta 19888870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 20764171 - 20764098
Alignment:
Q  259 ctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    |||||||| |||||  | ||||| | ||||| |||||||||| |||| ||||| || |||||||||||||||||    
T  20764171 ctaatagtaaaacacaactgaagtgcagtgaatgcaacatcttggataatattatcattggaatattcctagta 20764098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 266
Target Start/End: Complemental strand, 20896861 - 20896759
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttcatctgtttc--ac-ttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaa 262  Q
    |||| ||||||||| |||||||||| | | ||||||||||| | | ||||  || ||||||||||||||||| ||  | |||||||||||| ||||||||    
T  20896861 aagcttgtgcagagatgaacattctgaccttcagaatgttcctttttttcttactttagaatgatttgtaagacttacttttgatgtaatc-aatcctaa 20896763  T
Q  263 tagt 266  Q
    ||||    
T  20896762 tagt 20896759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 19479 - 19681
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||| |||||| |    ||||||| || |||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||    
T  19479 ttttgcttttcacctactgtactgttcataaagtaagcatgagctgagctgaacattctgatcatcagaatgttccatctgtttcacttaggatgatttg 19578  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattccta 329  Q
    |||| ||| ||||||||||||||||||||||||||||||||||  |||||| | ||| ||   ||||||||||||||||||| ||| || ||||||||||    
T  19579 taagactatcatttgatgtaatcaaatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattcccttgtgaaatattccta 19678  T
Q  330 gta 332  Q
    |||    
T  19679 gta 19681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 55922 - 56129
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||| |||| |||||| |    |||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  55922 ttttgcttttcacctattgtactgttcataaagtaagcatgtgcagagcttgaacattctgaccatcagaatgttccatctgtttcacttaggatgattt 56021  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgat----tgcaacatctaggatgatattctctt-tggaatat 324  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||       ||||||||||||||||||| ||| ||||||||    
T  56022 gtaagactaccatctgatgtaatcaaatcctaatagtgaaacaacaatgaagagcagtgatattaattaacatctaggatgatattcccttgtggaatat 56121  T
Q  325 tcctagta 332  Q
    ||||||||    
T  56122 tcctagta 56129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 177 - 332
Target Start/End: Original strand, 17435 - 17592
Alignment:
Q  177 gagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaaca 275  Q
    ||||| |||||||| | ||||||||||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  17435 gagcttaacattctgaccatcagaatgttccatctgtttcacttaggatgatttgtaagactaccatttaatgtaatcaaatcctaatagtgaaacaaca 17534  T
Q  276 atgaagcgtagtgattgcaacatctaggatgatattctctt-tggaatattcctagta 332  Q
    || ||| | |||||||  ||||||||||||||||||| ||| ||||||||||||||||    
T  17535 ataaagagcagtgattttaacatctaggatgatattcccttgtggaatattcctagta 17592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 13782 - 13584
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaatgatttg 230  Q
    ||||||||||||||||||||||||||||    |||||||||| | ||| |||||||| | | |||||||||| || | | ||||| ||||| ||||||||    
T  13782 ttttgcttttcacctactgtattgttca----taaagcatgttctgagttgaacattatgatcatcagaatggtccttttgtttctcttaggatgatttg 13687  T
Q  231 taaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctc-tttggaatattccta 329  Q
    |||| || |||||||||||||||||||| |||||||||||||||||||||| | ||||| || ||||||||||||||||||| | ||| |||||||||||    
T  13686 taagacttccatttgatgtaatcaaatcgtaatagtgaaacaacaatgaagagcagtgaatgtaacatctaggatgatattccctttttgaatattccta 13587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 7945 - 8148
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  7945 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 8044  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  8045 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 8144  T
Q  329 agta 332  Q
    ||||    
T  8145 agta 8148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 88; Significance: 3e-42; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 234091 - 234294
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagct-gaacattctaaacatcagaatgttc-atctgtttcacttagaatgattt 229  Q
    |||||||||||||||||| || |||||| |    ||||||| || ||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||    
T  234091 ttttgcttttcacctactatactgttcataaagtaagcatgagctgagcttgaacattctgatcatcagaatgttccatctgtttcacttaggatgattt 234190  T
Q  230 gtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatatt-ctctttggaatattcct 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||   |||||||||||||||||| || | || |||||||||    
T  234191 gtaagactatcatttgatgtaatcaaatcctaatagtgaaacaataatgaagagcagtgatgataacatctaggatgatattcctttgtgaaatattcct 234290  T
Q  329 agta 332  Q
    ||||    
T  234291 agta 234294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 153746 - 153831
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||| |||||  | ||||| | | ||| |||| ||||||||||||||||||| |||||||||||||||||    
T  153746 atgtaatcaaa-cctaatagtaaaacacaactgaagtgcattgaatgcatcatctaggatgatattctcattggaatattcctagta 153831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 146517 - 146432
Alignment:
Q  246 atgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||||||||| ||||||||| |||||  | || || | ||||| |||| |||||||||| |||||||| |||||||||||||||||    
T  146517 atgtaatcaaa-cctaatagtaaaacacaactggagtgcagtgaatgcatcatctaggataatattctcattggaatattcctagta 146432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 114782 - 114829
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||| |||||||||||| |||||||||||||||||    
T  114782 agtgaatgcatcatctaagatgatattctcattggaatattcctagta 114829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 332
Target Start/End: Original strand, 4376 - 4516
Alignment:
Q  194 catcagaatgttc-atctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattg 292  Q
    ||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||| | |||||||     
T  4376 catcagaatgttccatctatttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcttaatagtgaaactacaatgaagagcagtgattt 4475  T
Q  293 caacatctaggatgatattctctt-tggaatattcctagta 332  Q
     ||||||||||||||||||| ||| ||||||||||||||||    
T  4476 taacatctaggatgatattcccttatggaatattcctagta 4516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 206 - 332
Target Start/End: Original strand, 74896 - 75023
Alignment:
Q  206 catctgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggat 305  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||   |||||||  ||||||||||||    
T  74896 catctgtttcacttaggatgatttgtaagactaccatttgatgtaatcaaatcctaatagtgaaacaataatgaagatcagtgattttaacatctaggat 74995  T
Q  306 gatattctctt-tggaatattcctagta 332  Q
    ||||||| ||| ||||||||||||||||    
T  74996 gatattcccttgtggaatattcctagta 75023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 126 - 337
Target Start/End: Complemental strand, 65658 - 65445
Alignment:
Q  126 ttttgcttttgcttttcacctactgtattgttcacagt-taaagcatgtgcagagctgaacattctaaacatcagaatgttcatct-gtttcacttagaa 223  Q
    |||||||||  ||||||||||| ||||||||||| ||| ||||| |||||  |||||||||||||| ||| ||| ||||||| | | ||||||||||| |    
T  65658 ttttgctttcacttttcacctaatgtattgttcatagtctaaagtatgtgttgagctgaacattctgaacttcataatgttccttttgtttcacttagga 65559  T
Q  224 tgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaata 323  Q
    |||| ||||||  | |||||| ||||||||||||  ||||||||||||| ||| |||| | | || ||| ||||||||||||||||||||  || |||||    
T  65558 tgatatgtaagatttccatttcatgtaatcaaatattaatagtgaaacatcaaagaagtggaatgtttgtaacatctaggatgatattcttgttcgaata 65459  T
Q  324 ttcctagtatttca 337  Q
    ||||||||| ||||    
T  65458 ttcctagtacttca 65445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 137 - 337
Target Start/End: Original strand, 198800 - 199002
Alignment:
Q  137 cttttcacctactgtattgttcacagt-taaagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtttcacttagaatgatttgtaag 234  Q
    ||||||||||||||||||||||||||  ||||||||||| | ||||||||||| | | ||| || || ||| || |||||||||||| ||||||||||||    
T  198800 cttttcacctactgtattgttcacagaataaagcatgtgtacagctgaacattttgaccattagcatattccatttgtttcacttaggatgatttgtaag 198899  T
Q  235 gctaccatttgatgtaatcaaatcctaatagtgaaacaacaa-tgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtat 333  Q
     ||   ||||||||||| ||| ||||||||||||||  | || ||||| | |||||||||||||||||||||||||||||  ||||||||||| |||||     
T  198900 acttgtatttgatgtaaacaa-tcctaatagtgaaaacataactgaagtgcagtgattgcaacatctaggatgatattcttattggaatattcatagtac 198998  T
Q  334 ttca 337  Q
    ||||    
T  198999 ttca 199002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 137 - 337
Target Start/End: Original strand, 28867 - 29070
Alignment:
Q  137 cttttcacctactgtattgttcacagt-taaagcatgtgcagagctgaacattctaaacatcagaatgtt-catct-gtttcacttagaatgatttgtaa 233  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| | |||||||||||| ||| |  ||| |||||| |||| ||||||    
T  28867 cttttcacctactgtattgttcacagtataaagcatgtgcatagctgaatattctgatcatcagaatgttccatttatttttacttaggatgacttgtaa 28966  T
Q  234 ggctaccatttgatgtaatcaaatcctaatagtg-aaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    | ||   || |||||| ||| |||||||  |||| |||||  | ||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  28967 gacttgaatctgatgtgatc-aatcctatcagtgaaaacataactgaagtgcagtgattgcaacatctaggatgatattctcattggaatattgctagta 29065  T
Q  333 tttca 337  Q
    |||||    
T  29066 tttca 29070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 313
Target Start/End: Original strand, 241778 - 241970
Alignment:
Q  125 tttttgcttttgcttttcacctactgtattgttca--cag-ttaaagcatgtgcag-agctgaacattctaaacatcagaatgttcatctgtttcactta 220  Q
    |||||||||| ||||||||| ||||||| ||||||  ||  ||||||||||||| | |   |||| |||| ||| ||| ||||||| | |||||||||||    
T  241778 tttttgctttagcttttcacttactgtactgttcaatcatattaaagcatgtgctggaaacgaactttctgaacttcataatgttcctttgtttcactta 241877  T
Q  221 gaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattct 313  Q
    | |||||||||||| || | |||||||||||||| ||||||||||| | ||| |||||||| ||||||  |  ||||||||||||||||||||    
T  241878 ggatgatttgtaagacttctatttgatgtaatcagatcctaatagtaatacatcaatgaagtgtagtgtgtataacatctaggatgatattct 241970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 166 - 337
Target Start/End: Complemental strand, 15312 - 15139
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtt-tcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaat 263  Q
    ||||||||||| || |||||||||| | ||||||||||||| || |||| | ||||||||||||||||||| ||    |||||||||||||| |||||||    
T  15312 aagcatgtgcaaagatgaacattctgaccatcagaatgttccatttgttcttacttagaatgatttgtaagacttgtttttgatgtaatcaa-tcctaat 15214  T
Q  264 agtgaaacaacaa-tgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtatttca 337  Q
    ||| |||  | || ||||| ||||||| || ||||| || ||| |||||||||||||||||||||||||| ||||    
T  15213 agtaaaaacataactgaagtgtagtgaatgtaacatatatgataatattctctttggaatattcctagtacttca 15139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 332
Target Start/End: Complemental strand, 18669 - 18500
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttc-atctgtt-tcactt-agaatgatttgtaaggct-accatttgatgtaatcaaatccta 261  Q
    |||||||||||||  |||||||||| | | ||||||||||| ||||||| | |||| ||  ||||||||||| || | | ||| ||||||||||| ||||    
T  18669 aagcatgtgcagaagtgaacattctgatcttcagaatgttccatctgttcttactttaggttgatttgtaagacttaacttttaatgtaatcaaa-ccta 18571  T
Q  262 atagtgaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |  ||||| ||||| | ||||| |||| |||||||||| |||||||  |||||||||||||||||    
T  18570 atagtaagccaacactgaagtgcagtgaatgcatcatctaggataatattcttattggaatattcctagta 18500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 13178 - 13251
Alignment:
Q  132 ttttgcttttcacctactgtattgttcacagttaaagcatgtgcagagctgaacattctaaacatcagaatgtt 205  Q
    ||||||||||||||||||||| |||||| |    |||||||||| |||||||||||||| | ||||||||||||    
T  13178 ttttgcttttcacctactgtactgttcataaagtaagcatgtgctgagctgaacattctgaccatcagaatgtt 13251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 13709 - 13756
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  13709 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 13756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0764 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 984 - 1046
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  984 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 1046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 5625 - 5563
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  5625 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 5563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 19782 - 19720
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaaca 272  Q
    |||||||||||| |||||||||||| ||   | || |||||||||||||||||||||||||||    
T  19782 tgtttcacttaggatgatttgtaagacttgtaattaatgtaatcaaatcctaatagtgaaaca 19720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 3715 - 3778
Alignment:
Q  210 tgtttcacttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaatagtgaaacaa 273  Q
    |||||||||||| |||||||||||| ||   |||  ||||||||||||| ||||||||||||||    
T  3715 tgtttcacttagtatgatttgtaagactcttattaaatgtaatcaaatcgtaatagtgaaacaa 3778  T

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Target: scaffold0553 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 1125 - 1172
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  1125 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 1172  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 112050 - 112097
Alignment:
Q  285 agtgattgcaacatctaggatgatattctctttggaatattcctagta 332  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  112050 agtgaatgcatcatctaggacaatattctctttggaatattcctagta 112097  T

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Target: scaffold0520 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 367
Target Start/End: Original strand, 6042 - 6071
Alignment:
Q  338 tgaagcctccagctatagttttgatgatgt 367  Q
    ||||||||||||||||||||||||||||||    
T  6042 tgaagcctccagctatagttttgatgatgt 6071  T

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Target: scaffold0265 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 337
Target Start/End: Complemental strand, 11224 - 11050
Alignment:
Q  166 aagcatgtgcagagctgaacattctaaacatcagaatgttcatctgtttc--ac-ttagaatgatttgtaaggctaccatttgatgtaatcaaatcctaa 262  Q
    |||||||||||||| |||||||||||| | ||||||||||| | | ||||  || |||| |||||||||||| ||  | |||| ||||||| ||||||||    
T  11224 aagcatgtgcagagatgaacattctaaccttcagaatgttcctttttttcttactttaggatgatttgtaagacttacttttgttgtaatc-aatcctaa 11126  T
Q  263 tagt---gaaacaacaatgaagcgtagtgattgcaacatctaggatgatattctctttggaatattcctagtatttca 337  Q
    ||||   || ||||||  |||| | ||  |||| ||  |||||||  |||| ||||||||||||||||||||| ||||    
T  11125 tagtaaagacacaaca--gaagtgcagcaattgtaatttctaggacaatatcctctttggaatattcctagtacttca 11050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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