View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0669_low_49 (Length: 323)
Name: NF0669_low_49
Description: NF0669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0669_low_49 |
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Alignment Details
Target: chr4 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 94 - 249
Target Start/End: Complemental strand, 51912907 - 51912752
Alignment:
| Q |
94 |
acatcatcaaagttaacaatacttccttctcaattattactaattaccggttatttccaaatgtcttattccaaacgttattgagcttgaatgaccacta |
193 |
Q |
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| T |
51912907 |
acatcatcaaagttaacaatacttccttctcaattattactaattaccggttatttccaaatgtcttattccaaacgttattgagcttgaatgaccacta |
51912808 |
T |
|
| Q |
194 |
attggtgtaccgaatgaagagtcatttcccgtgtgtcctgcctgtgctctgtgctc |
249 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51912807 |
attggtgtaccgaatgaagagtcatttcccgtgtgtcctgcctgtgctctgtgctc |
51912752 |
T |
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