View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0669_low_67 (Length: 290)
Name: NF0669_low_67
Description: NF0669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0669_low_67 |
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Alignment Details
Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 42039844 - 42039931
Alignment:
| Q |
157 |
taaaggtaatacatgannnnnnnatgaagttttcattattttggttataccatagacaaatttgtcacatataatgttatattattgg |
244 |
Q |
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| T |
42039844 |
taaaggtaatacatgatttttttatggagttttcattattttagttataccatagacaaatttgtcacatataatgttatattcttgg |
42039931 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 42039160 - 42039223
Alignment:
| Q |
53 |
aatatcagcacaaaaagcaacatctcgaaaagnnnnnnnggcttgagaaaatagcacataccga |
116 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
42039160 |
aatatcagcacaaaaagcaacatctcgaaaagaaaaaaaggcttgagaaaatagcacataccga |
42039223 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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