View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0669_low_68 (Length: 288)

Name: NF0669_low_68
Description: NF0669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0669_low_68
NF0669_low_68
[»] chr5 (19 HSPs)
chr5 (61-244)||(146847-147030)
chr5 (1-75)||(146755-146829)
chr5 (94-213)||(144484-144593)
chr5 (1-43)||(17243009-17243051)
chr5 (1-43)||(11099532-11099574)
chr5 (1-43)||(35334581-35334623)
chr5 (1-43)||(39183682-39183724)
chr5 (1-37)||(16283642-16283678)
chr5 (1-51)||(15898194-15898244)
chr5 (94-124)||(18060191-18060221)
chr5 (1-43)||(20189903-20189945)
chr5 (1-43)||(25344793-25344835)
chr5 (1-51)||(31090307-31090357)
chr5 (1-43)||(31956741-31956783)
chr5 (1-43)||(33012365-33012407)
chr5 (1-51)||(39035910-39035960)
chr5 (1-43)||(42211344-42211386)
chr5 (1-49)||(15564943-15564991)
chr5 (1-41)||(35585671-35585711)
[»] chr7 (18 HSPs)
chr7 (1-43)||(46095474-46095516)
chr7 (1-43)||(34001913-34001955)
chr7 (1-43)||(37490672-37490714)
chr7 (1-43)||(37496451-37496493)
chr7 (1-43)||(44604531-44604573)
chr7 (1-43)||(2842106-2842148)
chr7 (1-43)||(2849266-2849308)
chr7 (1-43)||(3667931-3667973)
chr7 (1-51)||(9602864-9602914)
chr7 (1-51)||(9830435-9830485)
chr7 (1-43)||(29257558-29257600)
chr7 (1-43)||(29434634-29434676)
chr7 (5-43)||(33584574-33584612)
chr7 (1-43)||(34064226-34064268)
chr7 (1-43)||(36070116-36070158)
chr7 (1-51)||(38589737-38589787)
chr7 (1-43)||(46288485-46288527)
chr7 (7-43)||(14648979-14649015)
[»] chr6 (6 HSPs)
chr6 (1-43)||(117090-117132)
chr6 (1-43)||(7739572-7739614)
chr6 (1-51)||(15321279-15321329)
chr6 (1-51)||(15371917-15371967)
chr6 (1-43)||(30064003-30064045)
chr6 (7-51)||(15351443-15351487)
[»] chr4 (28 HSPs)
chr4 (1-51)||(38319914-38319964)
chr4 (1-43)||(39976444-39976486)
chr4 (1-43)||(41203748-41203790)
chr4 (1-43)||(22872442-22872484)
chr4 (1-43)||(34791006-34791048)
chr4 (1-43)||(38160206-38160248)
chr4 (1-43)||(42544220-42544262)
chr4 (1-43)||(43335077-43335119)
chr4 (1-43)||(46958733-46958775)
chr4 (8-43)||(42185857-42185892)
chr4 (8-43)||(47277743-47277778)
chr4 (1-40)||(50714596-50714635)
chr4 (1-43)||(283531-283573)
chr4 (1-43)||(3686022-3686064)
chr4 (1-43)||(4360462-4360504)
chr4 (1-43)||(17237054-17237096)
chr4 (1-35)||(27977166-27977200)
chr4 (1-43)||(28974317-28974359)
chr4 (1-43)||(29644366-29644408)
chr4 (1-43)||(38977002-38977044)
chr4 (1-43)||(39052955-39052997)
chr4 (1-43)||(41710198-41710240)
chr4 (1-43)||(42024255-42024297)
chr4 (1-43)||(49306598-49306640)
chr4 (1-43)||(51572282-51572324)
chr4 (1-39)||(53848661-53848699)
chr4 (1-43)||(54729538-54729579)
chr4 (2-51)||(9052105-9052154)
[»] chr1 (21 HSPs)
chr1 (1-43)||(17342839-17342881)
chr1 (1-51)||(33149276-33149326)
chr1 (7-51)||(10587642-10587686)
chr1 (1-43)||(2571374-2571416)
chr1 (1-51)||(2886174-2886224)
chr1 (1-43)||(7785329-7785371)
chr1 (5-43)||(8327728-8327766)
chr1 (1-43)||(11324259-11324301)
chr1 (1-43)||(11482280-11482322)
chr1 (1-43)||(28839350-28839392)
chr1 (1-43)||(48242645-48242687)
chr1 (1-43)||(27831857-27831899)
chr1 (1-43)||(29225764-29225806)
chr1 (1-51)||(29756197-29756247)
chr1 (1-39)||(32348233-32348271)
chr1 (1-51)||(37925301-37925351)
chr1 (1-43)||(46536351-46536393)
chr1 (1-43)||(51749238-51749280)
chr1 (1-41)||(28908106-28908146)
chr1 (1-41)||(34813930-34813970)
chr1 (7-43)||(40061820-40061856)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-43)||(26624-26666)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-43)||(394789-394831)
[»] chr8 (22 HSPs)
chr8 (1-43)||(5423218-5423260)
chr8 (1-43)||(10728976-10729018)
chr8 (1-43)||(32967331-32967373)
chr8 (1-43)||(42412437-42412479)
chr8 (1-43)||(42558635-42558677)
chr8 (1-33)||(325170-325202)
chr8 (1-41)||(21587290-21587330)
chr8 (1-51)||(886502-886552)
chr8 (1-43)||(2195479-2195521)
chr8 (1-43)||(5392060-5392102)
chr8 (1-43)||(8418356-8418398)
chr8 (1-43)||(11637151-11637193)
chr8 (1-43)||(12653698-12653740)
chr8 (1-51)||(14689963-14690013)
chr8 (1-51)||(14748760-14748810)
chr8 (1-43)||(27868379-27868421)
chr8 (1-43)||(28802778-28802820)
chr8 (1-43)||(29615809-29615851)
chr8 (1-43)||(31410662-31410704)
chr8 (1-43)||(39171554-39171596)
chr8 (1-43)||(39998174-39998216)
chr8 (7-43)||(7258427-7258463)
[»] chr3 (11 HSPs)
chr3 (1-43)||(5245423-5245465)
chr3 (1-43)||(15280616-15280658)
chr3 (1-43)||(27668381-27668423)
chr3 (1-43)||(36097709-36097751)
chr3 (1-43)||(39329804-39329846)
chr3 (1-51)||(46194260-46194310)
chr3 (1-51)||(1923093-1923143)
chr3 (1-43)||(9218156-9218198)
chr3 (1-43)||(32023155-32023197)
chr3 (1-43)||(52325188-52325230)
chr3 (7-43)||(42547166-42547202)
[»] chr2 (16 HSPs)
chr2 (1-43)||(4794584-4794626)
chr2 (1-51)||(6972594-6972644)
chr2 (1-43)||(23684970-23685012)
chr2 (1-43)||(28108429-28108471)
chr2 (1-43)||(28301445-28301487)
chr2 (1-43)||(41436090-41436132)
chr2 (5-43)||(44736730-44736768)
chr2 (7-51)||(43427146-43427190)
chr2 (1-43)||(435132-435174)
chr2 (1-43)||(3487405-3487447)
chr2 (1-43)||(7213486-7213528)
chr2 (1-43)||(10069639-10069681)
chr2 (1-43)||(11726776-11726818)
chr2 (1-43)||(26273770-26273812)
chr2 (1-43)||(44424317-44424359)
chr2 (7-40)||(4283079-4283112)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-43)||(8898-8940)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-43)||(5829-5871)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-43)||(14467-14509)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-43)||(98836-98878)


Alignment Details
Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 61 - 244
Target Start/End: Original strand, 146847 - 147030
Alignment:
Q  61 agtgaatacaatattattgtggaaagtatagtatattttgttgttttgtgaaatcaggaatcttcactgatacatgcagggtatgcaatagttgaggtga 160  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  146847 agtgaatacaatattattgtggaaagtataatatattttgttgttttgtgaaatcaggaatcttcactgatacatgcagggtatgcaatagttgcggtga 146946  T
Q  161 aatgatgttttgtttgtaaggatgtattattttaattggaaaaagtagaagttagatattggtgtaacagttagatattattcg 244  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  146947 aatgatgttttgttcgtaaggatgtattattttaattgcaaaaagtagaagttagatattggtgtaacagttagatattgttcg 147030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 146755 - 146829
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgttttatatcctagtgaatacaatatt 75  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  146755 aaagtagaatatattgaattgagagtgataaaagtagtattaagtagtgttttatatcttagtgaatacaatatt 146829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 144484 - 144593
Alignment:
Q  94 tattttgttgttttgtgaaatcaggaatcttcactgatacatgcagggtatgcaatagttgaggtgaaatgatgttttgtttgtaaggatgtattatttt 193  Q
    |||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||| ||||||||||||  ||| ||||||||||||     
T  144484 tattttgttgttttgtgaaatcaggaatctt----------tgcagggtatgcaatagttgatgtgaattgatgttttgttcttaatgatgtattattta 144573  T
Q  194 aattggaaaaagtagaagtt 213  Q
    ||||| || |||||| ||||    
T  144574 aattgaaagaagtagtagtt 144593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17243009 - 17243051
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  17243009 aaagtggaatatattgaattgagagtgatgaaagtagtattaa 17243051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11099532 - 11099574
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  11099532 aaagtggaatatattgaattgggagtgatgaaagtagtattaa 11099574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35334581 - 35334623
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  35334581 aaagtggaatatattgaattgggagtgatgaaagtagtattaa 35334623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39183682 - 39183724
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  39183682 aaagtggaatatattgaattgagagtgatgaaagtaatattaa 39183724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16283642 - 16283678
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtag 37  Q
    ||||||||||||||||||||||||||||| |||||||    
T  16283642 aaagtggaatatattgaattgagagtgatgaaagtag 16283678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15898244 - 15898194
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||||||||| | |||||| |||||| |||||||    
T  15898244 aaagtagaatatattgaattgagagtggtgaaagtaatattaattagtgtt 15898194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 124
Target Start/End: Original strand, 18060191 - 18060221
Alignment:
Q  94 tattttgttgttttgtgaaatcaggaatctt 124  Q
    |||||||||||||||||||||||||||||||    
T  18060191 tattttgttgttttgtgaaatcaggaatctt 18060221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20189945 - 20189903
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||||| |||| |||||| ||||||    
T  20189945 aaagtggaatatattgaattgagaatgatgaaagtaatattaa 20189903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25344793 - 25344835
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| |||||||||||||||||| |||| |||||||||||||    
T  25344793 aaagtagaatatattgaattgagaatgatgaaagtagtattaa 25344835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31090357 - 31090307
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| |||||||| |||||||||||| | ||||||||||||| |||||||    
T  31090357 aaagtagaatatatggaattgagagtgttgaaagtagtattaattagtgtt 31090307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31956783 - 31956741
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||    
T  31956783 aaagttgaatatattgagttgagagtgataaaagtaatattaa 31956741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33012407 - 33012365
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  33012407 aaagtggaatatatagaattgggagtgatgaaagtagtattaa 33012365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39035910 - 39035960
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    |||||| |||||||| ||||||||||| |||||||||| |||| |||||||    
T  39035910 aaagtgaaatatattaaattgagagtggtaaaagtagttttaattagtgtt 39035960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42211386 - 42211344
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| |||||||||||||| ||||||| |||||||||||||    
T  42211386 aaagtgaaatatattgaattgtgagtgatgaaagtagtattaa 42211344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15564943 - 15564991
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtg 49  Q
    ||||| ||||||||| ||||||||||||| |||||| |||||| |||||    
T  15564943 aaagtagaatatattaaattgagagtgatgaaagtaatattaattagtg 15564991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35585671 - 35585711
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtatt 41  Q
    |||||| |||||||||||||||||||||| |||||| ||||    
T  35585671 aaagtgaaatatattgaattgagagtgatgaaagtaatatt 35585711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46095474 - 46095516
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  46095474 aaagtgaaatatattgaattgagagtgataaaagtagtattaa 46095516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34001913 - 34001955
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  34001913 aaagtggaatatattgaattgagggtgatgaaagtagtattaa 34001955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37490672 - 37490714
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  37490672 aaagtggaatatattgaattgatagtgataaaagtaatattaa 37490714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37496451 - 37496493
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  37496451 aaagtagaatatattgaattgagagtgatgaaagtagtattaa 37496493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44604531 - 44604573
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  44604531 aaagtggaatatattgagttgagagtgatgaaagtagtattaa 44604573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2842106 - 2842148
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| ||||||||||||| |||||||| |||||||||||||    
T  2842106 aaagtgaaatatattgaatttagagtgatgaaagtagtattaa 2842148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2849308 - 2849266
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||| | |||||||||||||    
T  2849308 aaagtagaatatattgaattgagagtggtgaaagtagtattaa 2849266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3667931 - 3667973
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||    
T  3667931 aaagtagaatatattgaattgagagtgatgaaagtaatattaa 3667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9602914 - 9602864
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||| ||||||||||||||||| | ||||||||||||| |||||||    
T  9602914 aaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgtt 9602864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9830485 - 9830435
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||| ||||||||||||||||| | ||||||||||||| |||||||    
T  9830485 aaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgtt 9830435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29257600 - 29257558
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||    
T  29257600 aaagtggaatatattgaattgggagtgatgaaagtaatattaa 29257558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29434634 - 29434676
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| || |||| |||||||||||||    
T  29434634 aaagtggaatatattgaattgtgaatgatgaaagtagtattaa 29434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33584612 - 33584574
Alignment:
Q  5 tggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  33584612 tggaatatattgaattgggagtgatgaaagtagtattaa 33584574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34064268 - 34064226
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||    
T  34064268 aaagtagaatatattgaattgagagtgatgaaagtaatattaa 34064226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36070158 - 36070116
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||    
T  36070158 aaagtagaatatactgaattgagagtgatgaaagtagtattaa 36070116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38589787 - 38589737
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||| ||||| | ||||||||||||| |||||||    
T  38589787 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgtt 38589737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46288485 - 46288527
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||| ||| || |||||||||||||    
T  46288485 aaagtggaatatattgaattgaaagttatgaaagtagtattaa 46288527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 14648979 - 14649015
Alignment:
Q  7 gaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  14648979 gaatatattgaattgagagtgatgaaagtaatattaa 14649015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 117132 - 117090
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  117132 aaagtggaatatattgaattgagagtgatgaaagtagtattaa 117090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7739572 - 7739614
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||    
T  7739572 aaagtagaagatattgaattgagaatgataaaagtagtattaa 7739614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15321279 - 15321329
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| |||||||||||||||||| || | ||||||||||||| |||||||    
T  15321279 aaagtagaatatattgaattgagaatgttgaaagtagtattaattagtgtt 15321329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15371917 - 15371967
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||| ||||| | ||||||||||||| |||||||    
T  15371917 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgtt 15371967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30064003 - 30064045
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||    
T  30064003 aaagtggaatatattgaattgggagtgatgaaagtaatattaa 30064045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 15351443 - 15351487
Alignment:
Q  7 gaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||||||||||||||||| | | ||||||||||||| |||||||    
T  15351443 gaatatattgaattgagagcggtgaaagtagtattaattagtgtt 15351487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38319964 - 38319914
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  38319964 aaagtagaatatattgaattgagagtgatgaaagtagtattaattagtgtt 38319914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39976444 - 39976486
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  39976444 aaagtggaatatattgaattgagagtgatgaaagtagtattaa 39976486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41203790 - 41203748
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  41203790 aaagtggaatatattgaattgaaagtgataaaagtagtattaa 41203748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22872442 - 22872484
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  22872442 aaagtggaatatattgaattgagagtgatgaaagtaatattaa 22872484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34791006 - 34791048
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  34791006 aaagtagaatatattgaattgagagtgataaatgtagtattaa 34791048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38160206 - 38160248
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  38160206 aaagtgaaatatattgaattgagagtgataaaagtaatattaa 38160248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42544262 - 42544220
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  42544262 aaagtggaatatattgaattgtgagtgataaaagtaatattaa 42544220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43335077 - 43335119
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  43335077 aaagtggaatatattgaattgagagtgaagaaagtagtattaa 43335119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46958775 - 46958733
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  46958775 aaagtagaatatattgaattgagagtgattaaagtagtattaa 46958733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 42185857 - 42185892
Alignment:
Q  8 aatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||| |||||||||||||    
T  42185857 aatatattgaattgagagtgatgaaagtagtattaa 42185892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 47277743 - 47277778
Alignment:
Q  8 aatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||| |||||||||||||    
T  47277743 aatatattgaattgagagtgattaaagtagtattaa 47277778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 50714635 - 50714596
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtat 40  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  50714635 aaagtggaatatattgaattgagaatgatgaaagtagtat 50714596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 283531 - 283573
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  283531 aaagtggaatatatagaattgggagtgatgaaagtagtattaa 283573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3686064 - 3686022
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||    
T  3686064 aaagttgaatatattgaattgagagtgatgaaagtaatattaa 3686022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4360462 - 4360504
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| || |||| |||||||||||||    
T  4360462 aaagtggaatatattgaattgtgaatgatgaaagtagtattaa 4360504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17237096 - 17237054
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||| || ||| |||||||||||||    
T  17237096 aaagtggaatatattgaattgaaagcgatgaaagtagtattaa 17237054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 27977200 - 27977166
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagt 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  27977200 aaagtggaatatattgaattgagagtgatgaaagt 27977166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28974359 - 28974317
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||| ||||||||||||| |||||||||| |||||||||||||    
T  28974359 aaaggggaatatattgaaatgagagtgatgaaagtagtattaa 28974317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29644408 - 29644366
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| |||||||||||||||||| |||| |||||||||||||    
T  29644408 aaagtagaatatattgaattgagaatgatgaaagtagtattaa 29644366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38977044 - 38977002
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||| | |||| |||||||||||||    
T  38977044 aaagtggaatatattgaattgaaaatgatgaaagtagtattaa 38977002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39052955 - 39052997
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||| | |||||||||||||    
T  39052955 aaagtagaatatattgaattgagagtggtgaaagtagtattaa 39052997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41710198 - 41710240
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||    
T  41710198 aaagtggaatatattgaattgggagtgatgaaagtaatattaa 41710240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42024255 - 42024297
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||  |||||| |||||||||||||    
T  42024255 aaagtggaatatattgaattggaagtgatgaaagtagtattaa 42024297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49306640 - 49306598
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||  ||||||| |||||||||||||    
T  49306640 aaagtggaatatattgaattaggagtgatgaaagtagtattaa 49306598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51572282 - 51572324
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| ||||||||||||||  ||||||||||||||||||||    
T  51572282 aaagtgtaatatattgaattggaagtgataaaagtagtattaa 51572324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 53848699 - 53848661
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagta 39  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  53848699 aaagtagaatatattgaattgagagtgatgaaagtagta 53848661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 54729538 - 54729579
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  54729538 aaagtggaatatattgaattgag-gtgatgaaagtagtattaa 54729579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 9052105 - 9052154
Alignment:
Q  2 aagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    |||| |||||||||||||| ||| |||| ||||||||||||| |||||||    
T  9052105 aagtagaatatattgaattcagaatgatgaaagtagtattaattagtgtt 9052154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17342881 - 17342839
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17342881 aaagtgaaatatattgaattgagagtgataaaagtagtattaa 17342839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33149326 - 33149276
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  33149326 aaagtagaatatattgaattgagagtgatgaaagtagtattaattagtgtt 33149276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 10587642 - 10587686
Alignment:
Q  7 gaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  10587642 gaatatattgaattgagagtgatgaaagtagtattaattagtgtt 10587686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2571416 - 2571374
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  2571416 aaagtagaatatattgaattgagagtgatgaaagtagtattaa 2571374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2886224 - 2886174
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||||||||| | ||||||||||||| |||||||    
T  2886224 aaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgtt 2886174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7785329 - 7785371
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  7785329 aaagtgaaatatattgaattgagagcgataaaagtagtattaa 7785371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 8327766 - 8327728
Alignment:
Q  5 tggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  8327766 tggaatatattgaattgagagtgatgaaagtagtattaa 8327728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11324301 - 11324259
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  11324301 aaagtggaatatattgaattgagagtgatgaatgtagtattaa 11324259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11482322 - 11482280
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  11482322 aaagtggaatatattgaattgagagtgatgaatgtagtattaa 11482280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28839392 - 28839350
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  28839392 aaagtggaatatattgaattgggagtgatgaaagtagtattaa 28839350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48242645 - 48242687
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  48242645 aaagtggaatatattgaattgagaatgataaaagtaatattaa 48242687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27831899 - 27831857
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||    
T  27831899 aaagtggaagatattgaattgggagtgatgaaagtagtattaa 27831857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29225806 - 29225764
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||    
T  29225806 aaagtagaatatattgaattgggagtgatgaaagtagtattaa 29225764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29756197 - 29756247
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||| ||||| | ||||||||||||| |||||||    
T  29756197 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgtt 29756247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32348271 - 32348233
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagta 39  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  32348271 aaagtggaatatattgaattgggagtgatgaaagtagta 32348233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37925301 - 37925351
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||||||||| | |||||| |||||| |||||||    
T  37925301 aaagtagaatatattgaattgagagtggtgaaagtaatattaattagtgtt 37925351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46536393 - 46536351
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||| |||| |||||||| |||||||||||||    
T  46536393 aaagtggaatatattaaattaagagtgatgaaagtagtattaa 46536351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51749238 - 51749280
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||    
T  51749238 aaagtggaatatattgaattgggagtgatgaaagtaatattaa 51749280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28908146 - 28908106
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtatt 41  Q
    ||||| |||||||||||||||| |||||| |||||||||||    
T  28908146 aaagtagaatatattgaattgatagtgatgaaagtagtatt 28908106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34813970 - 34813930
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtatt 41  Q
    ||||| |||||||||||||||||| |||| |||||||||||    
T  34813970 aaagtagaatatattgaattgagaatgatgaaagtagtatt 34813930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 40061856 - 40061820
Alignment:
Q  7 gaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  40061856 gaatatattgaattgagagtgatgaaagtaatattaa 40061820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26666 - 26624
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  26666 aaagtggaatatattgaattgcgagtgatgaaagtagtattaa 26624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 394831 - 394789
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  394831 aaagtggaatatagtgaattgagagtgatgaaagtagtattaa 394789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5423218 - 5423260
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  5423218 aaagtggaagatattgaattgagaatgataaaagtagtattaa 5423260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10728976 - 10729018
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  10728976 aaagtggaatatattgaattgggagtgattaaagtagtattaa 10729018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32967331 - 32967373
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  32967331 aaagtggaatatattgaattgagaatgatgaaagtagtattaa 32967373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42412437 - 42412479
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  42412437 aaagtggaatatattgaattgggagtgatgaaagtagtattaa 42412479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42558635 - 42558677
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  42558635 aaagtggaatatattgaattaagagtgatgaaagtagtattaa 42558677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 325170 - 325202
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  325170 aaagtggaatatattgaattgagagtgataaaa 325202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21587330 - 21587290
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtatt 41  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  21587330 aaagtggaatatattgaattgggagtgatgaaagtagtatt 21587290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 886502 - 886552
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| |||||||| ||||||||| ||||||||||| |||||| |||||||    
T  886502 aaagtagaatatatcgaattgagaatgataaaagtaatattaattagtgtt 886552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2195521 - 2195479
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||    
T  2195521 aaagtagaatatattgaattgggagtgatgaaagtagtattaa 2195479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5392102 - 5392060
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||| | |||||||||||||    
T  5392102 aaagtggaatatattgaattgggagtgttgaaagtagtattaa 5392060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8418356 - 8418398
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||    
T  8418356 aaagtagaatatactgaattgagagtgatgaaagtagtattaa 8418398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11637193 - 11637151
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||| | |||||||||||||    
T  11637193 aaagtagaatatattgaattgagagtggtgaaagtagtattaa 11637151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12653740 - 12653698
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||||| |||| |||||| ||||||    
T  12653740 aaagtggaatatattgaattgagaatgatgaaagtaatattaa 12653698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14690013 - 14689963
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||| ||||| | ||||||||||||| |||||||    
T  14690013 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgtt 14689963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14748760 - 14748810
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| |||||||||||||||||| || | ||||||||||||| |||||||    
T  14748760 aaagtagaatatattgaattgagaatggtgaaagtagtattaattagtgtt 14748810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27868379 - 27868421
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| |||||||||||||||||| |||| |||||||||||||    
T  27868379 aaagtagaatatattgaattgagaatgatgaaagtagtattaa 27868421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28802820 - 28802778
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| ||| || ||||||    
T  28802820 aaagtggaatatattgaattgagagtgatgaaaatattattaa 28802778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29615851 - 29615809
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| || |||| |||||||||||||    
T  29615851 aaagtggaatatattgaattgggaatgatgaaagtagtattaa 29615809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31410662 - 31410704
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||| ||||| || |||||||||||||    
T  31410662 aaagtggaatatattgaattaagagtaatgaaagtagtattaa 31410704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39171596 - 39171554
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||    
T  39171596 aaagtggaatatattgaattgtgagtgatgaaaatagtattaa 39171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39998216 - 39998174
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||| | |||||||||||||    
T  39998216 aaagtagaatatattgaattgagagtggtgaaagtagtattaa 39998174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 7258427 - 7258463
Alignment:
Q  7 gaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  7258427 gaatatattgaattgggagtgatgaaagtagtattaa 7258463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5245465 - 5245423
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  5245465 aaagtggaatatattgaattgagagtgatgaaagtggtattaa 5245423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15280658 - 15280616
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  15280658 aaagtggaatatattgaattgggagtgatgaaagtagtattaa 15280616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27668381 - 27668423
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  27668381 aaagtgaaatatattgaattaagagtgataaaagtagtattaa 27668423  T

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Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36097709 - 36097751
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| |||||| ||||||    
T  36097709 aaagtggaatatattgaattgagagtgatgaaagtaatattaa 36097751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39329804 - 39329846
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  39329804 aaagtagaatatattgaattgagagtgatgaaagtagtattaa 39329846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46194260 - 46194310
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||||||||| | ||||||||||||| |||||||    
T  46194260 aaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgtt 46194310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1923143 - 1923093
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||| ||||| | ||||||||||||| |||||||    
T  1923143 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgtt 1923093  T

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Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9218198 - 9218156
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||    
T  9218198 aaagtagaatataatgaattgagagtgatgaaagtagtattaa 9218156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32023155 - 32023197
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||    
T  32023155 aaagttgaatatattgaattgagagtgatgaaagtaatattaa 32023197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52325230 - 52325188
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||||| |||  |||||||||||||    
T  52325230 aaagtggaatatattgaattgagaatgacgaaagtagtattaa 52325188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 42547166 - 42547202
Alignment:
Q  7 gaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  42547166 gaatatattgaattgggagtgatgaaagtagtattaa 42547202  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4794626 - 4794584
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  4794626 aaagtggaatatattgaattgaaagtgatgaaagtagtattaa 4794584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6972594 - 6972644
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| |||||||    
T  6972594 aaagtagaatatattgaattgagagtggtaaaagtaatattaattagtgtt 6972644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23685012 - 23684970
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  23685012 aaagtgaaatatattgaattgagagtgatgaaagtagtattaa 23684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28108429 - 28108471
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  28108429 aaagtggaatatattgaattgagaatgatgaaagtagtattaa 28108471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28301487 - 28301445
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  28301487 aaagtgaaatatattgaattgagagtgatgaaagtagtattaa 28301445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41436132 - 41436090
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  41436132 aaagtggaatatattgaattgagaatgatgaaagtagtattaa 41436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 44736768 - 44736730
Alignment:
Q  5 tggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  44736768 tggaatatattgaatcgagagtgataaaagtagtattaa 44736730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 43427146 - 43427190
Alignment:
Q  7 gaatatattgaattgagagtgataaaagtagtattaagtagtgtt 51  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||    
T  43427146 gaatatattgaattgggagtgatgaaagtagtattaattagtgtt 43427190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 435132 - 435174
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||| ||||||||||||||||| |||| |||||||||||||    
T  435132 aaagtgaaatatattgaattgagaatgatgaaagtagtattaa 435174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3487447 - 3487405
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||    
T  3487447 aaagtagaatatattgaattgagagtgatgaaagtaatattaa 3487405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7213528 - 7213486
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||  | |||||||||||||    
T  7213528 aaagtggaatatattgaattgagagttgtgaaagtagtattaa 7213486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10069639 - 10069681
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||    
T  10069639 aaagtcgaatatattgaattgagagtgatgaaagtattattaa 10069681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11726776 - 11726818
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| |||||||||||||| |||||||| |||||||||||||    
T  11726776 aaagtagaatatattgaattaagagtgatgaaagtagtattaa 11726818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26273812 - 26273770
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||    
T  26273812 aaagtagaatatattgaattgggagtgatgaaagtagtattaa 26273770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44424317 - 44424359
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| |||||||||||||||||| |||| |||||||||||||    
T  44424317 aaagttgaatatattgaattgagaatgatgaaagtagtattaa 44424359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 4283079 - 4283112
Alignment:
Q  7 gaatatattgaattgagagtgataaaagtagtat 40  Q
    ||||||||||||||||||||| ||||||||||||    
T  4283079 gaatatattgaattgagagtggtaaaagtagtat 4283112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8940 - 8898
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||||| |||| |||||| ||||||    
T  8940 aaagtggaatatattgaattgagaatgatgaaagtaatattaa 8898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5871 - 5829
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||| ||||||||||||||||||||| | |||||||||||||    
T  5871 aaagtagaatatattgaattgagagtggtgaaagtagtattaa 5829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14509 - 14467
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    |||||||||||||||||||||| | |||| |||||||||||||    
T  14509 aaagtggaatatattgaattgaaaatgatgaaagtagtattaa 14467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 98878 - 98836
Alignment:
Q  1 aaagtggaatatattgaattgagagtgataaaagtagtattaa 43  Q
    ||||||||||||||||||||||||||||| ||| || ||||||    
T  98878 aaagtggaatatattgaattgagagtgatgaaaataatattaa 98836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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