View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0670_low_13 (Length: 275)
Name: NF0670_low_13
Description: NF0670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0670_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 34672903 - 34672720
Alignment:
| Q |
39 |
tctcgttcaaacccacttaaaaatttggtcccaaactgacctggtaaattgacaagtacaaaacaaataatcctcctcgtctctaaagtcttgaggcacc |
138 |
Q |
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| T |
34672903 |
tctcgttcaaacccacttaaaaatttggtcccaaactgacctggcaaattgacaagtacaaaacaaataatcctcctcgtctctaaagtcttgaggcacc |
34672804 |
T |
|
| Q |
139 |
acacacaatctgcaaccctaccaccttgaagactaccccttttttaagggtgcaaatcataatcaaagtatgtgattatggttt |
222 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34672803 |
acacacaatctgcaaccctaccaccttgaagaataccccttttttaagggtgcaaatcataatcaaagtatgtgattatggttt |
34672720 |
T |
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