View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0670_low_5 (Length: 381)

Name: NF0670_low_5
Description: NF0670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0670_low_5
NF0670_low_5
[»] chr7 (54 HSPs)
chr7 (21-250)||(28556968-28557197)
chr7 (21-250)||(707565-707794)
chr7 (255-378)||(16108351-16108474)
chr7 (255-381)||(11303621-11303747)
chr7 (255-381)||(23664615-23664741)
chr7 (255-381)||(25926792-25926918)
chr7 (263-381)||(14269434-14269552)
chr7 (263-381)||(14269627-14269745)
chr7 (255-381)||(29796984-29797110)
chr7 (255-381)||(29800803-29800929)
chr7 (255-381)||(32125864-32125990)
chr7 (255-381)||(14948785-14948911)
chr7 (263-381)||(15376384-15376502)
chr7 (263-381)||(16410432-16410550)
chr7 (256-370)||(18431096-18431210)
chr7 (263-381)||(20384794-20384912)
chr7 (255-381)||(24702602-24702728)
chr7 (255-381)||(24705049-24705175)
chr7 (263-381)||(27217234-27217352)
chr7 (255-381)||(41523291-41523417)
chr7 (255-381)||(41525753-41525879)
chr7 (264-381)||(16232894-16233011)
chr7 (265-381)||(13869722-13869837)
chr7 (255-381)||(13918065-13918192)
chr7 (263-381)||(16214058-16214176)
chr7 (265-381)||(456695-456811)
chr7 (255-381)||(1856892-1857017)
chr7 (267-381)||(15081516-15081630)
chr7 (263-381)||(26355652-26355770)
chr7 (263-381)||(26358104-26358222)
chr7 (269-381)||(8940850-8940961)
chr7 (263-381)||(18627939-18628057)
chr7 (263-381)||(18640645-18640763)
chr7 (263-381)||(45847325-45847443)
chr7 (265-378)||(10501066-10501179)
chr7 (263-381)||(21189266-21189384)
chr7 (263-381)||(8940653-8940775)
chr7 (263-381)||(14156749-14156863)
chr7 (296-381)||(14269274-14269359)
chr7 (298-381)||(8941043-8941126)
chr7 (299-381)||(38897741-38897823)
chr7 (264-331)||(11392971-11393038)
chr7 (310-381)||(14156603-14156674)
chr7 (298-381)||(15081354-15081437)
chr7 (298-381)||(21189108-21189191)
chr7 (263-377)||(11310133-11310246)
chr7 (298-378)||(8469112-8469192)
chr7 (310-381)||(10500945-10501016)
chr7 (298-381)||(16214251-16214334)
chr7 (308-377)||(17985100-17985169)
chr7 (308-381)||(11972922-11972995)
chr7 (298-365)||(23461797-23461864)
chr7 (45-158)||(41385287-41385400)
chr7 (333-365)||(20110747-20110779)
[»] chr8 (46 HSPs)
chr8 (56-250)||(36900324-36900518)
chr8 (21-250)||(17706883-17707092)
chr8 (255-381)||(18677727-18677853)
chr8 (255-381)||(4542036-4542162)
chr8 (263-381)||(15070934-15071052)
chr8 (263-381)||(16412986-16413104)
chr8 (255-381)||(24485706-24485832)
chr8 (265-381)||(19896888-19897004)
chr8 (263-378)||(27472087-27472202)
chr8 (263-381)||(1484775-1484893)
chr8 (263-381)||(5852963-5853081)
chr8 (255-381)||(14397403-14397529)
chr8 (263-381)||(14409115-14409233)
chr8 (263-381)||(14824148-14824266)
chr8 (255-381)||(16198268-16198394)
chr8 (267-381)||(24048984-24049098)
chr8 (265-378)||(19936580-19936693)
chr8 (265-381)||(15202658-15202774)
chr8 (263-381)||(4483654-4483771)
chr8 (255-381)||(22002126-22002252)
chr8 (267-381)||(45290222-45290336)
chr8 (265-378)||(16401597-16401710)
chr8 (263-378)||(20045866-20045981)
chr8 (263-381)||(15202849-15202967)
chr8 (263-381)||(16401402-16401520)
chr8 (263-381)||(20403653-20403771)
chr8 (263-381)||(32122102-32122220)
chr8 (263-381)||(38549482-38549600)
chr8 (263-381)||(16401210-16401327)
chr8 (263-370)||(19896706-19896813)
chr8 (263-378)||(38549675-38549790)
chr8 (298-381)||(27471929-27472012)
chr8 (298-381)||(32122295-32122378)
chr8 (298-381)||(16412828-16412911)
chr8 (298-381)||(20403846-20403929)
chr8 (298-381)||(38549325-38549408)
chr8 (298-377)||(1326637-1326716)
chr8 (298-381)||(11361083-11361166)
chr8 (298-381)||(15071127-15071210)
chr8 (298-381)||(15202498-15202581)
chr8 (298-381)||(24049177-24049260)
chr8 (298-381)||(32810270-32810353)
chr8 (298-381)||(19936420-19936503)
chr8 (336-381)||(45290385-45290430)
chr8 (298-378)||(19897084-19897164)
chr8 (333-381)||(25657893-25657941)
[»] chr4 (45 HSPs)
chr4 (255-381)||(15534555-15534681)
chr4 (255-381)||(36038244-36038370)
chr4 (263-381)||(14970377-14970495)
chr4 (255-381)||(29267727-29267853)
chr4 (255-381)||(49547436-49547562)
chr4 (263-381)||(52872743-52872861)
chr4 (256-381)||(362554-362679)
chr4 (263-381)||(362747-362865)
chr4 (263-381)||(7640857-7640975)
chr4 (255-381)||(14048951-14049077)
chr4 (263-381)||(15118023-15118141)
chr4 (255-381)||(44615662-44615788)
chr4 (255-381)||(50222002-50222128)
chr4 (263-381)||(52312935-52313053)
chr4 (263-381)||(3515381-3515499)
chr4 (267-377)||(14745993-14746103)
chr4 (263-381)||(15495844-15495962)
chr4 (255-381)||(19243074-19243200)
chr4 (263-381)||(19617737-19617855)
chr4 (263-381)||(19857952-19858070)
chr4 (264-381)||(1837191-1837308)
chr4 (262-381)||(14746181-14746300)
chr4 (256-373)||(30147297-30147414)
chr4 (263-381)||(44772754-44772872)
chr4 (263-378)||(52313131-52313246)
chr4 (263-354)||(18214874-18214965)
chr4 (298-381)||(52872585-52872668)
chr4 (298-381)||(19617579-19617662)
chr4 (298-381)||(19858145-19858228)
chr4 (263-365)||(14185525-14185627)
chr4 (299-381)||(18214717-18214799)
chr4 (296-381)||(3515574-3515659)
chr4 (298-370)||(12778388-12778460)
chr4 (298-381)||(11960-12043)
chr4 (255-330)||(12033436-12033511)
chr4 (298-381)||(14970219-14970302)
chr4 (298-381)||(362940-363023)
chr4 (265-362)||(22725397-22725494)
chr4 (298-381)||(52313321-52313404)
chr4 (27-99)||(42225765-42225837)
chr4 (328-381)||(15495716-15495769)
chr4 (298-354)||(15489661-15489717)
chr4 (45-124)||(28427325-28427404)
chr4 (352-381)||(14185702-14185731)
chr4 (345-381)||(18218875-18218911)
[»] chr2 (58 HSPs)
chr2 (255-381)||(20261593-20261719)
chr2 (255-381)||(10684425-10684551)
chr2 (255-381)||(23135953-23136079)
chr2 (255-381)||(24897858-24897984)
chr2 (255-381)||(24900341-24900467)
chr2 (255-381)||(24902818-24902944)
chr2 (255-381)||(24905295-24905421)
chr2 (255-378)||(38967856-38967979)
chr2 (263-381)||(22105839-22105957)
chr2 (263-381)||(24681818-24681936)
chr2 (255-381)||(24907770-24907896)
chr2 (256-381)||(6726421-6726546)
chr2 (263-381)||(571771-571889)
chr2 (263-381)||(18809316-18809434)
chr2 (263-381)||(23131236-23131353)
chr2 (263-381)||(23133703-23133820)
chr2 (263-381)||(23711684-23711802)
chr2 (263-381)||(23931834-23931952)
chr2 (263-381)||(24368200-24368318)
chr2 (263-381)||(34402193-34402310)
chr2 (263-381)||(39682687-39682805)
chr2 (263-381)||(41523743-41523861)
chr2 (263-381)||(45027575-45027693)
chr2 (265-381)||(28577472-28577588)
chr2 (263-381)||(21154678-21154796)
chr2 (263-381)||(23709203-23709321)
chr2 (263-381)||(26508230-26508348)
chr2 (269-381)||(32214607-32214719)
chr2 (263-381)||(24642419-24642537)
chr2 (263-381)||(24918514-24918632)
chr2 (263-381)||(26505752-26505870)
chr2 (255-364)||(31345570-31345679)
chr2 (265-381)||(21154487-21154603)
chr2 (265-381)||(24671399-24671515)
chr2 (263-377)||(24529217-24529331)
chr2 (263-369)||(32039169-32039275)
chr2 (267-377)||(41523554-41523664)
chr2 (263-378)||(23709010-23709125)
chr2 (271-381)||(23706896-23707005)
chr2 (263-377)||(23706696-23706809)
chr2 (298-381)||(22106032-22106115)
chr2 (296-381)||(23932027-23932112)
chr2 (298-381)||(23706538-23706621)
chr2 (298-381)||(24529059-24529142)
chr2 (298-381)||(32214442-32214525)
chr2 (298-381)||(41523392-41523475)
chr2 (298-381)||(24368393-24368476)
chr2 (22-128)||(31559068-31559174)
chr2 (296-377)||(24918711-24918792)
chr2 (298-381)||(21154327-21154410)
chr2 (298-379)||(24682013-24682094)
chr2 (298-381)||(6726614-6726697)
chr2 (45-158)||(22059654-22059767)
chr2 (298-381)||(24671592-24671675)
chr2 (299-378)||(45027418-45027497)
chr2 (51-158)||(42827789-42827896)
chr2 (344-377)||(24788053-24788086)
chr2 (344-381)||(44584588-44584625)
[»] chr6 (55 HSPs)
chr6 (255-379)||(17883160-17883284)
chr6 (255-381)||(15892071-15892197)
chr6 (263-381)||(30676380-30676498)
chr6 (255-378)||(23415341-23415464)
chr6 (258-381)||(27557096-27557219)
chr6 (263-381)||(1598430-1598548)
chr6 (255-381)||(28288999-28289125)
chr6 (255-381)||(33862167-33862293)
chr6 (263-381)||(1598623-1598741)
chr6 (255-381)||(12742691-12742817)
chr6 (255-364)||(12942580-12942689)
chr6 (256-381)||(25689069-25689194)
chr6 (255-381)||(1540574-1540700)
chr6 (263-381)||(18334263-18334381)
chr6 (263-381)||(24422920-24423038)
chr6 (263-381)||(33864651-33864769)
chr6 (259-375)||(19858589-19858705)
chr6 (263-370)||(19847642-19847749)
chr6 (263-381)||(2290851-2290969)
chr6 (263-381)||(8055403-8055521)
chr6 (267-377)||(18914310-18914420)
chr6 (263-381)||(19005525-19005643)
chr6 (267-381)||(26924315-26924429)
chr6 (256-381)||(25688876-25689001)
chr6 (266-381)||(31630214-31630329)
chr6 (263-369)||(25737028-25737134)
chr6 (263-381)||(22782600-22782718)
chr6 (263-381)||(26924118-26924236)
chr6 (263-361)||(8987-9085)
chr6 (270-381)||(18914499-18914610)
chr6 (299-381)||(1871-1953)
chr6 (299-381)||(8830-8912)
chr6 (298-381)||(25535781-25535864)
chr6 (298-381)||(34963747-34963830)
chr6 (299-381)||(19847485-19847567)
chr6 (263-339)||(22981410-22981486)
chr6 (263-339)||(23806922-23806998)
chr6 (298-381)||(19005718-19005801)
chr6 (298-381)||(30676222-30676305)
chr6 (321-381)||(17377576-17377636)
chr6 (298-381)||(23992796-23992879)
chr6 (298-381)||(31630053-31630136)
chr6 (22-171)||(1134507-1134655)
chr6 (299-378)||(79-158)
chr6 (298-381)||(1598816-1598899)
chr6 (298-378)||(18914695-18914775)
chr6 (45-158)||(7799704-7799817)
chr6 (333-375)||(25689268-25689310)
chr6 (263-303)||(2028-2068)
chr6 (256-314)||(229-287)
chr6 (343-381)||(25737209-25737247)
chr6 (344-381)||(10905416-10905453)
chr6 (45-118)||(19401655-19401728)
chr6 (45-158)||(19597457-19597570)
chr6 (54-158)||(19581063-19581167)
[»] scaffold0138 (1 HSPs)
scaffold0138 (255-378)||(33548-33671)
[»] scaffold0200 (1 HSPs)
scaffold0200 (255-381)||(18027-18153)
[»] chr5 (31 HSPs)
chr5 (255-381)||(10732603-10732729)
chr5 (263-381)||(17516834-17516952)
chr5 (255-381)||(29346353-29346479)
chr5 (255-381)||(29348826-29348952)
chr5 (255-381)||(29351299-29351425)
chr5 (255-381)||(37804565-37804691)
chr5 (263-381)||(20909385-20909503)
chr5 (263-381)||(29330356-29330474)
chr5 (263-381)||(39363758-39363875)
chr5 (256-378)||(42245029-42245151)
chr5 (265-381)||(20917519-20917635)
chr5 (263-381)||(295945-296063)
chr5 (263-381)||(39245509-39245627)
chr5 (264-381)||(2154303-2154420)
chr5 (265-378)||(32027822-32027935)
chr5 (256-381)||(32028399-32028524)
chr5 (263-378)||(20901591-20901706)
chr5 (263-381)||(23064887-23065005)
chr5 (265-381)||(32028206-32028322)
chr5 (263-378)||(264439-264554)
chr5 (263-381)||(17516641-17516759)
chr5 (256-381)||(32028012-32028137)
chr5 (265-378)||(38619813-38619925)
chr5 (298-381)||(17516483-17516566)
chr5 (298-381)||(20901433-20901516)
chr5 (299-381)||(2154145-2154227)
chr5 (296-381)||(32028592-32028677)
chr5 (298-381)||(20917359-20917442)
chr5 (298-381)||(29330549-29330632)
chr5 (298-381)||(295787-295870)
chr5 (344-381)||(22755233-22755270)
[»] chr1 (35 HSPs)
chr1 (255-381)||(21841140-21841266)
chr1 (255-381)||(16362292-16362418)
chr1 (255-381)||(21922954-21923080)
chr1 (256-381)||(13227237-13227362)
chr1 (256-381)||(29535425-29535550)
chr1 (265-381)||(29777114-29777230)
chr1 (263-381)||(27161257-27161375)
chr1 (263-381)||(29298615-29298733)
chr1 (263-378)||(15859679-15859794)
chr1 (263-381)||(13989239-13989357)
chr1 (263-381)||(31612739-31612857)
chr1 (256-381)||(16274919-16275044)
chr1 (263-381)||(21474757-21474875)
chr1 (263-381)||(22122685-22122803)
chr1 (255-381)||(23593396-23593522)
chr1 (265-373)||(31612940-31613048)
chr1 (298-381)||(43543275-43543358)
chr1 (298-381)||(15859508-15859591)
chr1 (298-381)||(29298808-29298891)
chr1 (299-381)||(22050543-22050625)
chr1 (298-378)||(31613128-31613208)
chr1 (298-381)||(16401488-16401571)
chr1 (255-330)||(41372896-41372971)
chr1 (263-365)||(10812676-10812778)
chr1 (296-381)||(29777307-29777392)
chr1 (299-378)||(9044711-9044790)
chr1 (298-381)||(16274768-16274851)
chr1 (298-381)||(22122526-22122610)
chr1 (263-361)||(16401315-16401413)
chr1 (317-381)||(27161118-27161182)
chr1 (45-158)||(31815261-31815374)
chr1 (298-378)||(40129461-40129541)
chr1 (22-163)||(23573220-23573361)
chr1 (22-100)||(7384449-7384527)
chr1 (298-348)||(43630294-43630344)
[»] scaffold0716 (2 HSPs)
scaffold0716 (263-381)||(5068-5186)
scaffold0716 (298-378)||(5264-5344)
[»] scaffold0574 (2 HSPs)
scaffold0574 (263-381)||(6825-6943)
scaffold0574 (298-381)||(7018-7101)
[»] scaffold0422 (1 HSPs)
scaffold0422 (255-381)||(3397-3523)
[»] scaffold0278 (3 HSPs)
scaffold0278 (263-381)||(8113-8231)
scaffold0278 (263-381)||(8306-8424)
scaffold0278 (298-381)||(8499-8582)
[»] scaffold0230 (5 HSPs)
scaffold0230 (255-381)||(14321-14447)
scaffold0230 (263-381)||(23201-23319)
scaffold0230 (298-381)||(22883-22966)
scaffold0230 (263-340)||(23041-23118)
scaffold0230 (298-346)||(20716-20764)
[»] scaffold0029 (1 HSPs)
scaffold0029 (255-381)||(11663-11789)
[»] chr3 (65 HSPs)
chr3 (255-381)||(10247386-10247512)
chr3 (255-381)||(15465528-15465654)
chr3 (255-381)||(15977906-15978032)
chr3 (255-381)||(26054927-26055053)
chr3 (255-381)||(29544504-29544630)
chr3 (255-381)||(54521196-54521322)
chr3 (255-381)||(5223757-5223883)
chr3 (263-381)||(10557282-10557400)
chr3 (255-381)||(28848284-28848410)
chr3 (256-381)||(17444427-17444552)
chr3 (256-381)||(20629855-20629980)
chr3 (255-369)||(7781009-7781123)
chr3 (263-381)||(8499894-8500012)
chr3 (256-381)||(16453943-16454069)
chr3 (263-381)||(17463551-17463669)
chr3 (263-381)||(34159699-34159817)
chr3 (263-381)||(41124313-41124431)
chr3 (263-381)||(55318974-55319092)
chr3 (264-381)||(45606578-45606695)
chr3 (253-381)||(13436673-13436801)
chr3 (265-381)||(15412805-15412920)
chr3 (263-379)||(38961508-38961624)
chr3 (263-381)||(13153926-13154044)
chr3 (263-381)||(53301174-53301292)
chr3 (265-378)||(16282430-16282543)
chr3 (265-381)||(46822635-46822751)
chr3 (263-381)||(6468805-6468923)
chr3 (263-381)||(13151461-13151579)
chr3 (263-381)||(27165626-27165744)
chr3 (263-381)||(55476864-55476982)
chr3 (265-381)||(15007873-15007992)
chr3 (265-381)||(16358340-16358456)
chr3 (267-378)||(25229633-25229744)
chr3 (267-378)||(25237220-25237331)
chr3 (255-352)||(12305525-12305622)
chr3 (256-377)||(36528340-36528461)
chr3 (298-381)||(46822828-46822911)
chr3 (291-381)||(12567933-12568023)
chr3 (291-381)||(13544397-13544487)
chr3 (310-381)||(10379701-10379772)
chr3 (298-381)||(12119359-12119442)
chr3 (298-381)||(41124506-41124589)
chr3 (298-381)||(24514050-24514133)
chr3 (298-381)||(27165819-27165902)
chr3 (298-381)||(53301016-53301099)
chr3 (263-377)||(3264424-3264538)
chr3 (263-361)||(14567555-14567653)
chr3 (296-381)||(13937483-13937568)
chr3 (298-381)||(10557475-10557558)
chr3 (298-381)||(20629704-20629787)
chr3 (298-381)||(38961350-38961433)
chr3 (299-381)||(55318817-55318899)
chr3 (298-381)||(8500087-8500170)
chr3 (298-377)||(17444276-17444355)
chr3 (264-329)||(13937644-13937709)
chr3 (298-377)||(16282270-16282349)
chr3 (317-363)||(10555766-10555812)
chr3 (22-128)||(34594665-34594771)
chr3 (298-362)||(8899418-8899482)
chr3 (333-381)||(14567432-14567480)
chr3 (318-377)||(17393286-17393345)
chr3 (341-381)||(36528529-36528569)
chr3 (51-138)||(5386732-5386819)
chr3 (96-158)||(31200078-31200140)
chr3 (352-381)||(16358234-16358263)
[»] scaffold0363 (1 HSPs)
scaffold0363 (255-380)||(9616-9741)
[»] scaffold0064 (1 HSPs)
scaffold0064 (257-381)||(68335-68459)
[»] scaffold0695 (1 HSPs)
scaffold0695 (255-381)||(6320-6446)
[»] scaffold0051 (1 HSPs)
scaffold0051 (255-381)||(31577-31703)
[»] scaffold0028 (5 HSPs)
scaffold0028 (255-381)||(134584-134710)
scaffold0028 (255-381)||(137053-137179)
scaffold0028 (255-381)||(139522-139648)
scaffold0028 (255-381)||(141991-142117)
scaffold0028 (255-381)||(144460-144586)
[»] scaffold0023 (3 HSPs)
scaffold0023 (263-381)||(94784-94902)
scaffold0023 (256-369)||(17103-17216)
scaffold0023 (299-381)||(16953-17035)
[»] scaffold0293 (1 HSPs)
scaffold0293 (255-381)||(19751-19877)
[»] scaffold0134 (1 HSPs)
scaffold0134 (263-381)||(38195-38313)
[»] scaffold0117 (1 HSPs)
scaffold0117 (255-381)||(39706-39832)
[»] scaffold0040 (3 HSPs)
scaffold0040 (263-381)||(43113-43231)
scaffold0040 (298-381)||(43306-43389)
scaffold0040 (345-381)||(13379-13415)
[»] scaffold1296 (2 HSPs)
scaffold1296 (263-375)||(1634-1746)
scaffold1296 (296-381)||(1821-1906)
[»] scaffold0317 (2 HSPs)
scaffold0317 (263-378)||(6606-6721)
scaffold0317 (298-378)||(6448-6528)
[»] scaffold0254 (1 HSPs)
scaffold0254 (255-381)||(21121-21248)
[»] scaffold0741 (3 HSPs)
scaffold0741 (267-381)||(3784-3898)
scaffold0741 (263-381)||(3973-4091)
scaffold0741 (264-381)||(3588-3705)
[»] scaffold0436 (1 HSPs)
scaffold0436 (255-381)||(8392-8518)
[»] scaffold0043 (3 HSPs)
scaffold0043 (263-381)||(10165-10283)
scaffold0043 (265-378)||(10361-10474)
scaffold0043 (299-381)||(10551-10633)
[»] scaffold0747 (3 HSPs)
scaffold0747 (256-381)||(963-1088)
scaffold0747 (313-381)||(1156-1224)
scaffold0747 (298-381)||(1275-1358)
[»] scaffold0306 (4 HSPs)
scaffold0306 (263-378)||(11010-11125)
scaffold0306 (263-381)||(15296-15404)
scaffold0306 (298-378)||(10852-10932)
scaffold0306 (298-381)||(15479-15561)
[»] scaffold0444 (1 HSPs)
scaffold0444 (263-369)||(13778-13884)
[»] scaffold0044 (1 HSPs)
scaffold0044 (263-381)||(40773-40891)
[»] scaffold0149 (2 HSPs)
scaffold0149 (263-381)||(30393-30511)
scaffold0149 (298-381)||(30586-30669)
[»] scaffold0711 (3 HSPs)
scaffold0711 (263-381)||(7361-7478)
scaffold0711 (263-369)||(7168-7274)
scaffold0711 (263-331)||(7553-7621)
[»] scaffold0322 (2 HSPs)
scaffold0322 (298-381)||(18504-18587)
scaffold0322 (263-340)||(18352-18429)
[»] scaffold1792 (3 HSPs)
scaffold1792 (263-381)||(581-699)
scaffold1792 (298-381)||(934-1017)
scaffold1792 (263-340)||(782-859)
[»] scaffold0151 (3 HSPs)
scaffold0151 (263-381)||(36869-36987)
scaffold0151 (336-377)||(36749-36790)
scaffold0151 (262-311)||(37061-37110)
[»] scaffold0001 (2 HSPs)
scaffold0001 (263-381)||(501439-501556)
scaffold0001 (298-381)||(501631-501714)
[»] scaffold0042 (1 HSPs)
scaffold0042 (293-377)||(75605-75689)
[»] scaffold0494 (1 HSPs)
scaffold0494 (298-381)||(229-312)
[»] scaffold0454 (1 HSPs)
scaffold0454 (255-330)||(1-76)
[»] scaffold0129 (1 HSPs)
scaffold0129 (45-158)||(3748-3861)
[»] scaffold0021 (1 HSPs)
scaffold0021 (298-376)||(398-476)
[»] scaffold0140 (1 HSPs)
scaffold0140 (22-163)||(35914-36055)
[»] scaffold0022 (1 HSPs)
scaffold0022 (333-381)||(53612-53660)
[»] scaffold0074 (1 HSPs)
scaffold0074 (298-381)||(38361-38444)
[»] scaffold0014 (1 HSPs)
scaffold0014 (298-377)||(113394-113473)
[»] scaffold1427 (1 HSPs)
scaffold1427 (352-381)||(1802-1831)
[»] scaffold0048 (1 HSPs)
scaffold0048 (344-381)||(53941-53978)


Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 28557197 - 28556968
Alignment:
Q  21 acatcatcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtc 120  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28557197 acatcatcaattgaattgcctatatgtgggtgcaacaaaatcataaggatgttcatctccaatttaaatgaaaatcctaaaaggagatattggaaatgtc 28557098  T
Q  121 caacctttacggtgagttcgttgttataatactatgtttgttgtatatttttaaagaagtttaatttaattaaaagcttaatatgtttattttattgttt 220  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||||||||||||||||||||| |||||||| |    
T  28557097 caacctttacggtgagttcgttgttataatactatgattgttgtataattttaacaaagtttaatttaattaaaagcttaatatgtttaatttattgtgt 28556998  T
Q  221 aggctgcctcattggtgggtaattgagtct 250  Q
    ||| ||||||||||||||||||||||||||    
T  28556997 aggttgcctcattggtgggtaattgagtct 28556968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 707794 - 707565
Alignment:
Q  21 acatcatcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtc 120  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  707794 acatcatcaattgaattgcctatatgtgggtgcaacaaaatcataaggatgttcatctccaatttaaatgaaaaccctaaaaggagatattggaaatgtc 707695  T
Q  121 caacctttacggtgagttcgttgttataatactatgtttgttgtatatttttaaagaagtttaatttaattaaaagcttaatatgtttattttattgttt 220  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  707694 caacctttacggtgtgttcgttgttataatactatgtttgttgtataattttaacaaagtttaatttaattaaaagcttaatatgtttaatttattgttt 707595  T
Q  221 aggctgcctcattggtgggtaattgagtct 250  Q
    ||||| ||||||| ||||||||||||||||    
T  707594 aggctacctcattagtgggtaattgagtct 707565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 255 - 378
Target Start/End: Original strand, 16108351 - 16108474
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16108351 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacac 16108450  T
Q  355 gaaagttgtaggtatggatgttag 378  Q
    ||||||||||||||||||||||||    
T  16108451 gaaagttgtaggtatggatgttag 16108474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 11303747 - 11303621
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  11303747 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattggtacataattggtcttagatgtaaacac 11303648  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  11303647 gaaagttgtaggtatggatgttagctt 11303621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 23664615 - 23664741
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  23664615 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaaatggtattgattggtacagaattggtcttaggtgtaaacac 23664714  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  23664715 gaaagttgtaggtatggatgttagctt 23664741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 25926792 - 25926918
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  25926792 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 25926891  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||| |||||||    
T  25926892 gaaagttgtaggtatggatattagctt 25926918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 14269434 - 14269552
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14269434 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 14269533  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  14269534 taggtatggatgttagctt 14269552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 14269627 - 14269745
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14269627 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 14269726  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  14269727 taggtatggatgttagctt 14269745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 29797110 - 29796984
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||    
T  29797110 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaagcac 29797011  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  29797010 gaaagttgtaggtatggatgttagctt 29796984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 29800929 - 29800803
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||    
T  29800929 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaagcac 29800830  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  29800829 gaaagttgtaggtatggatgttagctt 29800803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 32125990 - 32125864
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32125990 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 32125891  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  32125890 gaaagttgtaggtataaatgttagctt 32125864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 14948785 - 14948911
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  14948785 gaggtcttagtgaatttttatgaattttagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 14948884  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  14948885 gaaagttgtaggtataaatgttagctt 14948911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 15376384 - 15376502
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15376384 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 15376483  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  15376484 taggtataaatgttagctt 15376502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 16410550 - 16410432
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16410550 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 16410451  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  16410450 taggtataaatgttagctt 16410432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 18431210 - 18431096
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  18431210 aggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaactggtcttaggtgtaaacacg 18431111  T
Q  356 aaagttgtaggtatg 370  Q
    |||||||||||||||    
T  18431110 aaagttgtaggtatg 18431096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 20384794 - 20384912
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20384794 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 20384893  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  20384894 taggtataaatgttagctt 20384912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 24702728 - 24702602
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24702728 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattggttggtacagaattggtcttaggtgtaaacac 24702629  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    ||| |||||||||||  ||||||||||    
T  24702628 gaaggttgtaggtataaatgttagctt 24702602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 24705175 - 24705049
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24705175 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattggttggtacagaattggtcttaggtgtaaacac 24705076  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    ||| |||||||||||  ||||||||||    
T  24705075 gaaggttgtaggtataaatgttagctt 24705049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 27217352 - 27217234
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27217352 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 27217253  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  27217252 taggtataaatgttagctt 27217234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 41523417 - 41523291
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||     
T  41523417 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacat 41523318  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
     ||||||||||||||  ||||||||||    
T  41523317 aaaagttgtaggtataaatgttagctt 41523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 41525879 - 41525753
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||     
T  41525879 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacat 41525780  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
     ||||||||||||||  ||||||||||    
T  41525779 aaaagttgtaggtataaatgttagctt 41525753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 264 - 381
Target Start/End: Complemental strand, 16233011 - 16232894
Alignment:
Q  264 gtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgt 363  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16233011 gtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgt 16232912  T
Q  364 aggtatggatgttagctt 381  Q
    ||||||  ||||||||||    
T  16232911 aggtataaatgttagctt 16232894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 13869837 - 13869722
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13869837 tgaatttttatgaatttcagcacaactttgtccgaatt-gaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgta 13869739  T
Q  365 ggtatggatgttagctt 381  Q
    |||||||||||||||||    
T  13869738 ggtatggatgttagctt 13869722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 13918065 - 13918192
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtc-ttaggtgtaaaca 353  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  13918065 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtctttaggtgtaaaca 13918164  T
Q  354 cgaaagttgtaggtatggatgttagctt 381  Q
    |||||  |||||||||| ||||||||||    
T  13918165 cgaaaactgtaggtatgaatgttagctt 13918192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 16214176 - 16214058
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||    
T  16214176 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattgatacagaattggtcttacgtgtaaacacaaaagttg 16214077  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  16214076 taggtatggatgttagctt 16214058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 456811 - 456695
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  456811 tgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaaccggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgta 456712  T
Q  365 ggtatggatgttagctt 381  Q
    |||||  ||||||||||    
T  456711 ggtataaatgttagctt 456695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 1856892 - 1857017
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||||||||||||||||  ||||||||||||||||||||||    
T  1856892 gaggtcttagtgaatttttatgaatttcagaacaactttgtccgaatttgaaataaaaactggtattgattggtaccgaattggtcttaggtgtaaacac 1856991  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    | |||||||||||||| ||||||||||    
T  1856992 g-aagttgtaggtatgaatgttagctt 1857017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 15081516 - 15081630
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||    
T  15081516 aatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacacaaaagttgtagg 15081615  T
Q  367 tatggatgttagctt 381  Q
    |||| ||||||||||    
T  15081616 tatgaatgttagctt 15081630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 26355652 - 26355770
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  26355652 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaataaaaactggtattgattggtacagaattggtcttatgtgttaacacgaaagttg 26355751  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  26355752 taggtatgaatgttagctt 26355770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 26358104 - 26358222
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  26358104 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaataaaaactggtattgattggtacagaattggtcttatgtgttaacacgaaagttg 26358203  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  26358204 taggtatgaatgttagctt 26358222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 8940961 - 8940850
Alignment:
Q  269 tttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggta 368  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  8940961 tttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattgatacataattggtcttaggtgtaaaca-aaaagttgtaggta 8940863  T
Q  369 tggatgttagctt 381  Q
    |||||||||||||    
T  8940862 tggatgttagctt 8940850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 18628057 - 18627939
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  18628057 agtgaatttttatgaatttcagcacaactttgtccgaatttaaaatgaaaactgatattgattggcacagaattggtcttaggtgtaaacacgaaagttg 18627958  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  18627957 taggtataaatgttagctt 18627939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 18640763 - 18640645
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  18640763 agtgaatttttaagaatttcagcacaactttgtccgaatttgaaatgaaaactgatattgattggcacagaattggtcttaggtgtaaacacgaaagttg 18640664  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  18640663 taggtataaatgttagctt 18640645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 45847325 - 45847443
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||| |  |||||||||||||| |||||||||||||| ||||||| |||||||    
T  45847325 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaaataatattgattggtacaaaattggtcttaggtataaacacaaaagttg 45847424  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  45847425 taggtatggatgttagctt 45847443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 265 - 378
Target Start/End: Original strand, 10501066 - 10501179
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||| |||||||||    
T  10501066 tgaatttttatgaatttcagcacaaccttgtccgaatttgaaatgaaaactggtattgattgatacagagttggtcttaggtgtaaacacaaaagttgta 10501165  T
Q  365 ggtatggatgttag 378  Q
    ||||||||||||||    
T  10501166 ggtatggatgttag 10501179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 21189266 - 21189384
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||| |||||||||||||  |||||||| |||||||||||||| ||||||||| | ||||||||||||||||||| ||||||||    
T  21189266 agtgaatttttatgaatttccgcacaactttgtccaaatttgaaatgaaaactggtatttattggtacagagttggtcttaggtgtaaacaagaaagttg 21189365  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  21189366 taggtatgaatgttagctt 21189384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 8940775 - 8940653
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaa----acacgaaa 358  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    ||||||||    
T  8940775 agtgaatttttatgaatttaagcacaactttgtccgaatttgaaatgaaaactgctattgattggtacaaaattggtcttaggtgtaaacacacacgaaa 8940676  T
Q  359 gttgtaggtatggatgttagctt 381  Q
    |||||||||||| ||||||||||    
T  8940675 gttgtaggtatgaatgttagctt 8940653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 14156749 - 14156863
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||    |||| |||||||    
T  14156749 agtgaatttttatgaatttcagcacaaccttgtccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggt----acactaaagttg 14156844  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  14156845 taggtatgaatgttagctt 14156863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 14269274 - 14269359
Alignment:
Q  296 ctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14269274 ctgaatttgaaatgaaatctggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagctt 14269359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 8941126 - 8941043
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8941126 gaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 8941043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 38897741 - 38897823
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| ||||| ||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38897741 aatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaactcgaaagttgtaggtatggatgttagctt 38897823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 11392971 - 11393038
Alignment:
Q  264 gtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtaca 331  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  11392971 gtgaatttttatgaatttcagcataactttgtccgaatttgaaatgaaaactggtattgattggtaca 11393038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 14156603 - 14156674
Alignment:
Q  310 aaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||||||||    
T  14156603 aaaactggtattgatcggtacagaattggtcttaggtgataacacgaaagttgtaggtatggatgttagctt 14156674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 15081354 - 15081437
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||  |||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  15081354 gaatttgaaatgaaatatggtattgataggtccataattggtcttagaagtaaacacgaaagttgtaggtatggatgttagctt 15081437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 21189108 - 21189191
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21189108 gaatttgaaatgaaatctggtattgataggtcaacaattggtcttaggtgtaaacacgaaagttgtaggtatggatattagctt 21189191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 11310246 - 11310133
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||| |||||||||||||||||||| ||  | ||||||||| ||||||||| |||||||  ||||||||||||||||||||||   ||| |||||||    
T  11310246 agtgaatatttatgaatttcagcacaacctttcccgaatttgaaatgaaaactg-tattgataagtacataattggtcttaggtgttttcacaaaagttg 11310148  T
Q  363 taggtatggatgtta 377  Q
    ||||||| |||||||    
T  11310147 taggtatagatgtta 11310133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 298 - 378
Target Start/End: Complemental strand, 8469192 - 8469112
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    ||||||||| ||||| ||||||||||| ||| || |||||||||||| |||||||||||||||||||||||| ||||||||    
T  8469192 gaatttgaaatgaaatctggtattgataggtccagaattggtcttagctgtaaacacgaaagttgtaggtatagatgttag 8469112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 10500945 - 10501016
Alignment:
Q  310 aaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||| |||||| |||||||||||||||  |||| |||||||||||||||||||||||||||    
T  10500945 aaaactggtattgatcggtacagaattggtcttaggtgataacatgaaagttgtaggtatggatgttagctt 10501016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 16214334 - 16214251
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||  |||||||||| ||| || |||||||||||||||||||||| || |||||||||||||||||||||||    
T  16214334 gaatttgaaatgaaatttggtattgataggtccagaattggtcttaggtgtaaacacaaaggttgtaggtatggatgttagctt 16214251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 17985100 - 17985169
Alignment:
Q  308 tgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||| ||||||||    
T  17985100 tgaaatctggtattgatcggtacagaattggtcttaggtgtaaacatgaaagttgtaggtaaggatgtta 17985169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 11972995 - 11972922
Alignment:
Q  308 tgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||| ||||||||||| ||| || |||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  11972995 tgaaatctggtattgataggtccagaatttgtcttaggtgtaaacacgaaagttgtaggtataaatgttagctt 11972922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 23461797 - 23461864
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtag 365  Q
    ||||||||| ||||  ||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  23461797 gaatttgaaatgaagtctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtag 23461864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 41385400 - 41385287
Alignment:
Q  45 tgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgt 144  Q
    ||||| ||||||||||| || || |||||||| || |||| |  ||| || ||||||||||||||||||||||  ||||||| ||  ||||||| | |||    
T  41385400 tgtggttgcaacaaaattatgagaatgttcatatccaattcacttgacaaccctaaaaggagatattggaaatacccaacctatattgtgagtttgctgt 41385301  T
Q  145 tataatactatgtt 158  Q
    | ||||||| ||||    
T  41385300 tgtaatactttgtt 41385287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 365
Target Start/End: Complemental strand, 20110779 - 20110747
Alignment:
Q  333 aattggtcttaggtgtaaacacgaaagttgtag 365  Q
    |||||||||||||||||||||||||||||||||    
T  20110779 aattggtcttaggtgtaaacacgaaagttgtag 20110747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 56 - 250
Target Start/End: Original strand, 36900324 - 36900518
Alignment:
Q  56 caaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgttataatactat 155  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36900324 caaaatcataaggatgttcatctccaatttaaatgaaaaccctaaaaggagatattgaaaatgtccaacctttacggtgagttcgttgttataatactat 36900423  T
Q  156 gtttgttgtatatttttaaagaagtttaatttaattaaaagcttaatatgtttattttattgtttaggctgcctcattggtgggtaattgagtct 250  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36900424 gtttgttgtataattttaacaaagtttaatttaattaaaagcttaatatgtttaatttattgtttaggctgcctcattggtgggtaattgagtct 36900518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 17707092 - 17706883
Alignment:
Q  21 acatcatcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtc 120  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||    
T  17707092 acatcatcaattgaattacctatatgtgggcgcaacaaaatcataaggatgttcatctccaatttaaatgaaaaccct-aaagaagatattggaaatgtc 17706994  T
Q  121 caacctttacggtgagttcgttgttataatactatgtttgttgtatatttttaaagaagtttaatttaattaaaagcttaatatgtttattttattgttt 220  Q
    |||||||||||||||||||||||                   ||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  17706993 caacctttacggtgagttcgttg-------------------gtataattttaacaaagtttaatttaattaaaagcttaatatgtttaatttattgttt 17706913  T
Q  221 aggctgcctcattggtgggtaattgagtct 250  Q
    |||||||||||||||||||||||| |||||    
T  17706912 aggctgcctcattggtgggtaattaagtct 17706883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 18677727 - 18677853
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||| |||||||    
T  18677727 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaattttaaatgaaaactggtattgattggtacataattggtcttaggtataaacac 18677826  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  18677827 gaaagttgtaggtatggatgttagctt 18677853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 4542036 - 4542162
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  4542036 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 4542135  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  4542136 gaaagttgtaggtataaatgttagctt 4542162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 15071052 - 15070934
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15071052 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttg 15070953  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  15070952 taggtatggatgttagctt 15070934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 16412986 - 16413104
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16412986 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgacagttg 16413085  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  16413086 taggtatggatgttagctt 16413104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 24485706 - 24485832
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  24485706 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttgggtgtaaacac 24485805  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  24485806 gaaagttgtaggtatgaatgttagctt 24485832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 19897004 - 19896888
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19897004 tgaatttttatgaatttcagcacaactttgtccgaattttaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgta 19896905  T
Q  365 ggtatggatgttagctt 381  Q
    |||||||||||||||||    
T  19896904 ggtatggatgttagctt 19896888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 27472087 - 27472202
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27472087 agtgaatttttatgaatttcagcacaactttgtccgagtttgaaatgaaaactggtattgattggtacataattggtcttagctgtaaacacgaaagttg 27472186  T
Q  363 taggtatggatgttag 378  Q
    ||||||||||||||||    
T  27472187 taggtatggatgttag 27472202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 1484893 - 1484775
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1484893 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 1484794  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  1484793 taggtataaatgttagctt 1484775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 5852963 - 5853081
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5852963 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 5853062  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  5853063 taggtataaatgttagctt 5853081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 14397403 - 14397529
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  14397403 gaggtcttagtgaaaatttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 14397502  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    ||||| |||||||||| ||||||||||    
T  14397503 gaaagctgtaggtatgaatgttagctt 14397529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 14409115 - 14409233
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14409115 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 14409214  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  14409215 taggtataaatgttagctt 14409233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 14824266 - 14824148
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  14824266 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacacgaaagttg 14824167  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  14824166 taggtatgaatgttagctt 14824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 16198394 - 16198268
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  16198394 gaggtcttagtgaaattttatgaatttcaccacaactttgtccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacac 16198295  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||| |||||||    
T  16198294 gaaagttgtaggtatggatattagctt 16198268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 267 - 381
Target Start/End: Complemental strand, 24049098 - 24048984
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24049098 aatttttatgaatttcagcacaactttgtccgaatttgaaataaaaactggtattgattggtacataattggtcttaggtgtaaacacaaaagttgtagg 24048999  T
Q  367 tatggatgttagctt 381  Q
    |||||||||||||||    
T  24048998 tatggatgttagctt 24048984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 265 - 378
Target Start/End: Original strand, 19936580 - 19936693
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19936580 tgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgta 19936679  T
Q  365 ggtatggatgttag 378  Q
    |||||| |||||||    
T  19936680 ggtatgaatgttag 19936693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 381
Target Start/End: Original strand, 15202658 - 15202774
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  15202658 tgaatttttatgaatttcagcacaacgttgtccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacacgaaagttgta 15202757  T
Q  365 ggtatggatgttagctt 381  Q
    |||||||||||||||||    
T  15202758 ggtatggatgttagctt 15202774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 4483771 - 4483654
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  4483771 agtgaatttttatgaatttcagcacaactttgtccgaatt-gaaatgaaaactggtatttattggtacataattggtcttaggtataaacacgaaagttg 4483673  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  4483672 taggtatggatgttagctt 4483654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 22002252 - 22002126
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||     
T  22002252 gaggtcttagtgaatttgtatgaatttcagcacaactttgtccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacat 22002153  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  22002152 gaaagttgtaggtataaatgttagctt 22002126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 45290222 - 45290336
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  45290222 aatttttatgaatttcagcacaactttgttcgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtagg 45290321  T
Q  367 tatggatgttagctt 381  Q
    |||||||||||||||    
T  45290322 tatggatgttagctt 45290336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 265 - 378
Target Start/End: Original strand, 16401597 - 16401710
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  16401597 tgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactgatattgattgatacataattggtcttaggtgtaaacacgaaagttgta 16401696  T
Q  365 ggtatggatgttag 378  Q
    ||||| ||||||||    
T  16401697 ggtattgatgttag 16401710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 20045866 - 20045981
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20045866 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 20045965  T
Q  363 taggtatggatgttag 378  Q
    |||||||  |||||||    
T  20045966 taggtataaatgttag 20045981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 15202849 - 15202967
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||| |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  15202849 agtgaatatttatgaatttcagcacaactttgtccgaatttgaaacgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttg 15202948  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  15202949 taggtatgaatgttagctt 15202967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 16401402 - 16401520
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||| |||||||||||||  ||||||||||| ||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16401402 agtgaatgtttatgaatttcaatacaactttgtcagaatttgaaatgcaaactggtattgattggtacgtaattggtcttaggtgtaaacacgaaagttg 16401501  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  16401502 taggtatggatgttagctt 16401520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 20403771 - 20403653
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  20403771 agtgaatgtttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaaacacgaaagttg 20403672  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  20403671 taggtattaatgttagctt 20403653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 32122220 - 32122102
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| || |||||| |||||||||||||| ||||| ||||||||||||||||||| ||||    
T  32122220 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgtaaactgatattgattggtacagaattgttcttaggtgtaaacacgaatgttg 32122121  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  32122120 taggtatggatgttagctt 32122102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 38549482 - 38549600
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||    
T  38549482 agtgaatttttatgaatttcagcacaactttgtccgaatttaaaatgaaaactggtattgattggtacagaattgatcttaggtataaacacggaagttg 38549581  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  38549582 taggtatggatgttagctt 38549600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 16401210 - 16401327
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||| || ||||||| ||||||||||||||||||||||    
T  16401210 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaatctggtattgataggtccagaattggt-ttaggtgtaaacacgaaagttg 16401308  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  16401309 taggtatggatgttagctt 16401327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 19896813 - 19896706
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| | |||||||||||||||||||||||||| |||    
T  19896813 agtgaatttttatgaatttcagcacaactttgtccgaattttaaatgaaaactggtattgattggtagagaattggtcttaggtgtaaacacgaaaattg 19896714  T
Q  363 taggtatg 370  Q
    ||||||||    
T  19896713 taggtatg 19896706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 38549675 - 38549790
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| ||||| |||||||||||||||| | |||||||||||||| ||||||| |||||||    
T  38549675 agtgaatttttatgaatttcatcacaactttgtccgaatttgaaatgaaatctggtattgattggtaaagaattggtcttaggtataaacacaaaagttg 38549774  T
Q  363 taggtatggatgttag 378  Q
    ||||||||||||||||    
T  38549775 taggtatggatgttag 38549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 27471929 - 27472012
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471929 gaatttgaaatgaaaactgatattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 27472012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 32122378 - 32122295
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32122378 gaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 32122295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 16412828 - 16412911
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  16412828 gaatttgaaatgaaaattggtattgattggtacagaactggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 16412911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 20403929 - 20403846
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  20403929 gaatttgaaatgaaaactggtattgattgctacataattggtcttaggtgtaaacacaaaagttgtaggtatgaatgttagctt 20403846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 38549325 - 38549408
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38549325 gaatttgaaatgaaatctggtattgataggtacagaattggtcttaggtgtaaacacgaaagttgtatgtatggatgttagctt 38549408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 377
Target Start/End: Original strand, 1326637 - 1326716
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| ||||||    
T  1326637 gaatttgaaatgaaatctggtattgattggtacagaattggtcttaagtgtaaaaacgaaagttgtaggtatgaatgtta 1326716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 11361166 - 11361083
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| || |||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11361166 gaatttgaaatgaaatctagtattgataggtgcataattggtcttaggtgtaaacacaaaacttgtaggtatggatgttagctt 11361083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 15071210 - 15071127
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| | ||||||||||||||| |||| | ||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  15071210 gaatttgaaataaaaactggtattgatcggtaaagaattgatcttaggggtaaacacgaaagttgtaggtatggatgttagctt 15071127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 15202498 - 15202581
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| | | || |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15202498 gaatttgaaatgaaatctggtattgatagatccagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagctt 15202581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 24049260 - 24049177
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||  |||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24049260 gaatttgaaatgaaatatggtattgataggtccagaattggtcttaggtgtaaacacgaaagttataggtatggatgttagctt 24049177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 32810353 - 32810270
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||  ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32810353 gaatttgaaatgaaatctaatattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 32810270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 19936420 - 19936503
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| ||| || ||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  19936420 gaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacatgaaagttgtagctatggatattagctt 19936503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 45290385 - 45290430
Alignment:
Q  336 tggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45290385 tggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 45290430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 298 - 378
Target Start/End: Complemental strand, 19897164 - 19897084
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    ||||||||| ||||| ||||||||||| ||| || |||||||||||| |||||| || ||||||||||||||| |||||||    
T  19897164 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttagctgtaaatacaaaagttgtaggtatgaatgttag 19897084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 25657893 - 25657941
Alignment:
Q  333 aattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  25657893 aattggtctttggtgtaaacatgaaagttgtaggtatggatgttagctt 25657941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 15534681 - 15534555
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  15534681 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 15534582  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  15534581 gaaagttgtaggtatggatgttagctt 15534555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 36038370 - 36038244
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||    
T  36038370 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattggtacagaattggccttaggtgtaaacac 36038271  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  36038270 gaaagttgtaggtatggatgttagctt 36038244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 14970377 - 14970495
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  14970377 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacacgaaagttg 14970476  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  14970477 taggtatggatgttagctt 14970495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 29267853 - 29267727
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  29267853 gaggtctcagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 29267754  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  29267753 gaaagttgtaggtataaatgttagctt 29267727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 49547436 - 49547562
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  49547436 gaggtcttaatgaatttttatgaatttcagcacaaatttgtcagaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 49547535  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||| ||||||||||||||||||||||    
T  49547536 gaaatttgtaggtatggatgttagctt 49547562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 52872743 - 52872861
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52872743 agtgaatgtttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 52872842  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||| ||||||    
T  52872843 taggtatggatgctagctt 52872861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 256 - 381
Target Start/End: Complemental strand, 362679 - 362554
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  362679 aggtcatagtgattttttatgaatttcagcacaactttgtctgaatttgaaatgaaaactggtattgattgatacaaaattagtcttaggtgtaaacacg 362580  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||    
T  362579 aaagttgtaggtatggatgttagctt 362554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 362865 - 362747
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  362865 agtgaatttttatgaatatcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacactaaagttg 362766  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  362765 taggtatggatgttagctt 362747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 7640857 - 7640975
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7640857 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 7640956  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  7640957 taggtataaatgttagctt 7640975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 14049077 - 14048951
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||     
T  14049077 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactagtattgattggtacataattggttttaggtgtaaacat 14048978  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||| ||||||||||    
T  14048977 gaaagttgtgggtatgaatgttagctt 14048951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 15118023 - 15118141
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15118023 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 15118122  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  15118123 taggtataaatgttagctt 15118141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 44615788 - 44615662
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  44615788 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacac 44615689  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||| ||||||||||  ||||||||||    
T  44615688 gaaatttgtaggtataaatgttagctt 44615662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 50222002 - 50222128
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50222002 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 50222101  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
     |||| |||||||||  ||||||||||    
T  50222102 aaaagatgtaggtataaatgttagctt 50222128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 52313053 - 52312935
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52313053 agtgaatttttatgaatttcagcacaagtttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 52312954  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  52312953 taggtatgaatgttagctt 52312935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 3515499 - 3515381
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  3515499 agtgaatttttatgaattttagcacaactttgtccgaatttgaaatgaaaactggtattgatcggtacaaaattggtcttaggtgtaaacacaaaagttg 3515400  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  3515399 taggtatggatgttagctt 3515381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 267 - 377
Target Start/End: Original strand, 14745993 - 14746103
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  14745993 aatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacaagaaagttgtagg 14746092  T
Q  367 tatggatgtta 377  Q
    |||||||||||    
T  14746093 tatggatgtta 14746103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 15495844 - 15495962
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  15495844 agtgaatttttatgaatttcagcacaactttgtcctaatttggaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttg 15495943  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  15495944 taggtatggatgttagctt 15495962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 19243200 - 19243074
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||| ||||||||| ||||||     
T  19243200 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaacgaaaactggtattgattggtacagaattagtcttaggtataaacaa 19243101  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  19243100 gaaagttgtaggtatgtatgttagctt 19243074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 19617737 - 19617855
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| ||||| ||||||     
T  19617737 agtgaatttttatgaatttcagcacaactttgtctgaatttgaaatgaaaactggtattgattggtacagagttggtcttaggtgttaacacaaaagtta 19617836  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  19617837 taggtatggatgttagctt 19617855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 19858070 - 19857952
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19858070 agtgaatttttatgaatttcagcacaactttgtccgaatgagaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttg 19857971  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  19857970 taggtatgtatgttagctt 19857952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 1837191 - 1837308
Alignment:
Q  264 gtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgt 363  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  1837191 gtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacatgaaagttgt 1837290  T
Q  364 aggtatggatgttagctt 381  Q
    ||||||  ||||||||||    
T  1837291 aggtataaatgttagctt 1837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 262 - 381
Target Start/End: Original strand, 14746181 - 14746300
Alignment:
Q  262 tagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagtt 361  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||  |||||||||    
T  14746181 tagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttcggtgtaaggacgaaagtt 14746280  T
Q  362 gtaggtatggatgttagctt 381  Q
    ||||||||| ||||||||||    
T  14746281 gtaggtatgaatgttagctt 14746300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 30147414 - 30147297
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||||||||||| ||||||||||||||||||||||     
T  30147414 aggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaaatggaattgattggtacaaaattggtcttaggtgtaaacaca 30147315  T
Q  356 aaagttgtaggtatggat 373  Q
    ||||||||| ||||||||    
T  30147314 aaagttgtaagtatggat 30147297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 44772754 - 44772872
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||| ||||| |||||| || |||||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  44772754 agtgaatttttatgaatttcagcacaacattgtccgaattttaaatgaaaactggtatttattggtagagaattggtcttaggtgtaaacacgaaagttg 44772853  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  44772854 taggtatgaatgttagctt 44772872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 263 - 378
Target Start/End: Complemental strand, 52313246 - 52313131
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||| || ||||| |||||||||||||||| |||||||    
T  52313246 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaatctggtattgataggtccagaattgatcttaggtgtaaacacaaaagttg 52313147  T
Q  363 taggtatggatgttag 378  Q
    ||||||||||||||||    
T  52313146 taggtatggatgttag 52313131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 263 - 354
Target Start/End: Original strand, 18214874 - 18214965
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  18214874 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 18214965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 52872585 - 52872668
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52872585 gaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 52872668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 19617579 - 19617662
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19617579 gaatttgaaatgaaatctggtattgattggtacataattggtcttaggtgtagacacgaaagttgtaggtatggatgttagctt 19617662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 19858228 - 19858145
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  19858228 gaatttgaaatgaaaaatggtattgattggtacagaattggtcttaggtgcaaacacaaaagttgtaggtatggatgttagctt 19858145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 14185627 - 14185525
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||| |||| ||||||||||||||||||  | ||||||||| | |||||||||||||||||||||| |||||||||||||||| |||| ||||||||    
T  14185627 agtgaatctttaggaatttcagcacaacttttcccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgttaacatgaaagttg 14185528  T
Q  363 tag 365  Q
    |||    
T  14185527 tag 14185525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 18214717 - 18214799
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18214717 aatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 18214799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 3515659 - 3515574
Alignment:
Q  296 ctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||| ||||| ||||||||||| ||| || ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3515659 ctgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggcgtaaacacgaaagttgtaggtatggatgttagctt 3515574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 298 - 370
Target Start/End: Original strand, 12778388 - 12778460
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatg 370  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12778388 gaatttgaaatgaaatctggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatg 12778460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 11960 - 12043
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  11960 gaatttgaaatgaaatctggtattgataggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatcaatgttagctt 12043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 12033436 - 12033511
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtac 330  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  12033436 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtaaagattggtac 12033511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 14970219 - 14970302
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  14970219 gaatttgaaatgaaaactggtattgatttgtacacaattggtcttaggtgataacacaaaagttgtaggtatggatgttagctt 14970302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 363023 - 362940
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||  ||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  363023 gaatttgaaatgaaatgtggtattgatttgtatagaattggtcttaggtgtaaacccgaaagttgtaggtatggatgttagctt 362940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 22725397 - 22725494
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||| |||||||||||||||||||||||  |  |||||||| ||||||||| ||||||| |||||| |||||||||| |||||||||| ||||||||    
T  22725397 tgaatctttatgaatttcagcacaacttttcccaaatttgaaatgaaaactgatattgataggtacagaattggtctttggtgtaaacatgaaagttg 22725494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 52313404 - 52313321
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| |||  | ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  52313404 gaatttgaaatgaaatctggtattgataggtcaagaattgatcttaggtgtaaacacgaaagttataggtatggatgttagctt 52313321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 42225765 - 42225837
Alignment:
Q  27 tcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatccta 99  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||| ||||    
T  42225765 tcaatttaattgcttatatgtggttgcaacaaaatcatgaggatgttcatctccaattcaaatgaaaacccta 42225837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 381
Target Start/End: Original strand, 15495716 - 15495769
Alignment:
Q  328 tacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15495716 tacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagctt 15495769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 15489661 - 15489717
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||| ||||  ||||||||||||| |||| ||||||||||||||||||||||    
T  15489661 gaatttgaaatgaagtctggtattgattgatacagaattggtcttaggtgtaaacac 15489717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 28427325 - 28427404
Alignment:
Q  45 tgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaac 124  Q
    ||||| |||||||||| |   ||||||||||| || |||| || |||||| ||||||| ||||||||||||||| |||||    
T  28427325 tgtggttgcaacaaaaccgcgaggatgttcatatccaattcaattgaaaaccctaaaaagagatattggaaatgcccaac 28427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 381
Target Start/End: Complemental strand, 14185731 - 14185702
Alignment:
Q  352 cacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||||||    
T  14185731 cacgaaagttgtaggtatggatgttagctt 14185702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 18218875 - 18218911
Alignment:
Q  345 gtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  18218875 gtgtaaacatgaaagttgtaggtatgaatgttagctt 18218911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 20261719 - 20261593
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  20261719 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 20261620  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  20261619 gaaagttgtaggtatggatgttagctt 20261593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 10684425 - 10684551
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||    
T  10684425 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaagcac 10684524  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  10684525 gaaagttgtaggtatggatgttagctt 10684551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 23136079 - 23135953
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  23136079 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacac 23135980  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  23135979 gaaagttgtaggtataaatgttagctt 23135953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 24897858 - 24897984
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24897858 gaggtcttagtgaatttttatgaatttcagcacaactttatccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacac 24897957  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  24897958 gaaagttgtaggtatgaatgttagctt 24897984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 24900341 - 24900467
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24900341 gaggtcttagtgaatttttatgaatttcagcacaactttatccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacac 24900440  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  24900441 gaaagttgtaggtatgaatgttagctt 24900467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 24902818 - 24902944
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24902818 gaggtcttagtgaatttttatgaatttcagcacaactttatccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacac 24902917  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  24902918 gaaagttgtaggtatgaatgttagctt 24902944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 24905295 - 24905421
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24905295 gaggtcttagtgaatttttatgaatttcagcacaactttatccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacac 24905394  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  24905395 gaaagttgtaggtatgaatgttagctt 24905421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 255 - 378
Target Start/End: Complemental strand, 38967979 - 38967856
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  38967979 gaggtcttagtgaatttttatgaatttcagcacaactttgttcgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaatac 38967880  T
Q  355 gaaagttgtaggtatggatgttag 378  Q
    ||||||||||| ||||||||||||    
T  38967879 gaaagttgtagatatggatgttag 38967856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 22105957 - 22105839
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  22105957 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtgcagaattggtcttaggtgtaaacacgaaagttg 22105858  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  22105857 taggtatggatgttagctt 22105839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 24681936 - 24681818
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  24681936 agtgaatttttatgaatttcagcacaactttgtctgaatttgaaatgaaaactggtattggttggtacagaattggtcttagctgtaaacacgaaagttg 24681837  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  24681836 taggtatggatgttagctt 24681818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 24907770 - 24907896
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||     
T  24907770 gaggtcttagtgaatttttatgaatttcagcacaactttatccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacat 24907869  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  24907870 gaaagttgtaggtatgaatgttagctt 24907896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 256 - 381
Target Start/End: Complemental strand, 6726546 - 6726421
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  6726546 aggtcatagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattgatacataagtggtcttaggtgtaaacacg 6726447  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||| ||||||||||    
T  6726446 aaagttgtaggtatgaatgttagctt 6726421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 571889 - 571771
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  571889 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaataaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 571790  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  571789 taggtataaatgttagctt 571771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 18809434 - 18809316
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18809434 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 18809335  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  18809334 taggtataaatgttagctt 18809316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 23131353 - 23131236
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23131353 agtgaatttttatgaatttcagcacaactttgtccgaatt-gaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttg 23131255  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  23131254 taggtatggatgttagctt 23131236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 23133820 - 23133703
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23133820 agtgaatttttatgaatttcagcacaactttgtccgaatt-gaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttg 23133722  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  23133721 taggtatggatgttagctt 23133703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 23711684 - 23711802
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23711684 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 23711783  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  23711784 taggtataaatgttagctt 23711802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 23931952 - 23931834
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23931952 agtgtatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacactaaagttg 23931853  T
Q  363 taggtatggatgttagctt 381  Q
    ||||||| |||||||||||    
T  23931852 taggtattgatgttagctt 23931834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 24368318 - 24368200
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24368318 agtgaatttttatgaatttcaacacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 24368219  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  24368218 taggtatgaatgttagctt 24368200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 34402193 - 34402310
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34402193 agtgaatttttatgaatttcagcacaactttgtccgaatt-gaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttg 34402291  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  34402292 taggtatggatgttagctt 34402310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 39682805 - 39682687
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39682805 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 39682706  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  39682705 taggtataaatgttagctt 39682687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 41523743 - 41523861
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  41523743 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattagtcttaggtgtaaacacgaaagttg 41523842  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  41523843 taggtatgaatgttagctt 41523861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 45027575 - 45027693
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45027575 agtgattttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 45027674  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  45027675 taggtatgaatgttagctt 45027693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 28577588 - 28577472
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  28577588 tgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacacgaaagttgta 28577489  T
Q  365 ggtatggatgttagctt 381  Q
    |||||| ||||||||||    
T  28577488 ggtatgaatgttagctt 28577472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 21154678 - 21154796
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  21154678 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaatttgtcttaggggtaaacacgaaagttg 21154777  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  21154778 taggtatgaatgttagctt 21154796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 23709203 - 23709321
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | || |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23709203 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaataaatactggtattgattggtacataattggtcttaggtgtaaacacaaaagttg 23709302  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  23709303 taggtatgaatgttagctt 23709321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 26508348 - 26508230
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26508348 agtgaatttttatgaatttcagcacaaccttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 26508249  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  26508248 taggtataaatgttagctt 26508230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 32214607 - 32214719
Alignment:
Q  269 tttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggta 368  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  32214607 tttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacaaaattgttcttaggtgtaaacacaaaagttgtaggta 32214706  T
Q  369 tggatgttagctt 381  Q
    |||||||||||||    
T  32214707 tggatgttagctt 32214719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 24642419 - 24642537
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| ||||| |||||||||||||| | |||||||    
T  24642419 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaaagaaaactggtattgattggtacagaattgctcttaggtgtaaacccaaaagttg 24642518  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  24642519 taggtatggatgttagctt 24642537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 24918632 - 24918514
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||| | ||||||||||| ||||||||| ||||||||    
T  24918632 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactgatattgattggtagagaattggtcttaagtgtaaacatgaaagttg 24918533  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  24918532 taggtatggatgttagctt 24918514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 26505870 - 26505752
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  26505870 agtgaatttttatgaatttcagcacaaccttgtccgaatttgaaatgaaaactggtattgattggtacagaattgatcttaggtgtaaacacgaaagttg 26505771  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  26505770 taggtataaatgttagctt 26505752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 255 - 364
Target Start/End: Complemental strand, 31345679 - 31345570
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  31345679 gaggtcttagtaaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattgatcttaggtgtaaacac 31345580  T
Q  355 gaaagttgta 364  Q
    ||||||||||    
T  31345579 gaaagttgta 31345570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 265 - 381
Target Start/End: Original strand, 21154487 - 21154603
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| || | |||||||| |||||||||||||||||||||||    
T  21154487 tgaatttttatgaatttcagcagaactttgtccgaatttgaaatgaaaactggtattgattgttatagaattggtcctaggtgtaaacacgaaagttgta 21154586  T
Q  365 ggtatggatgttagctt 381  Q
    |||||||||||||||||    
T  21154587 ggtatggatgttagctt 21154603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 24671515 - 24671399
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||| ||||||||||||||||||||| ||||||||| || ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  24671515 tgaatttttaagaatttcagcacaactttgtccgaatttgaaatgcaaactggtatttattggtacagaattggtcttaggtgtaaaaacgaaagttgta 24671416  T
Q  365 ggtatggatgttagctt 381  Q
    |||||||||||||||||    
T  24671415 ggtatggatgttagctt 24671399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 377
Target Start/End: Original strand, 24529217 - 24529331
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||||||||||||||||  ||||| || |||||||| ||||||||||||||| |||||||||||||||||||||| |||||||    
T  24529217 agtgaatttttatgaatttcagcacaactttgtccaaatttaaaatgaaaacttgtattgattggtacaaaattggtcttaggtgtaaacacaaaagttg 24529316  T
Q  363 taggtatggatgtta 377  Q
    |||||||||||||||    
T  24529317 taggtatggatgtta 24529331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 369
Target Start/End: Original strand, 32039169 - 32039275
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  32039169 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtaaaggattggtcttaggtgtaaacacgaaagttg 32039268  T
Q  363 taggtat 369  Q
    |||||||    
T  32039269 taggtat 32039275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 267 - 377
Target Start/End: Original strand, 41523554 - 41523664
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||  ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  41523554 aatttttatgaatttcagcacaactttgtacgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaggttgtagg 41523653  T
Q  367 tatggatgtta 377  Q
    |||||||||||    
T  41523654 tatggatgtta 41523664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 23709010 - 23709125
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||| ||| |||| ||| |||||||||||||| ||||||    
T  23709010 agtgaatttttatgaatttcagcacaactttgtccgattttgaaatgaaaactggtattgattggcacagaattcgtcctaggtgtaaacacgtaagttg 23709109  T
Q  363 taggtatggatgttag 378  Q
    ||||||||||||||||    
T  23709110 taggtatggatgttag 23709125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 23706896 - 23707005
Alignment:
Q  271 tttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatg 370  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  23706896 tttatgaatttcagcacaacttt-tccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatg 23706994  T
Q  371 gatgttagctt 381  Q
    |||||||||||    
T  23706995 gatgttagctt 23707005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 263 - 377
Target Start/End: Original strand, 23706696 - 23706809
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||||| | |||||||||||||| |||||||||||||||||||||||||||||     
T  23706696 agtgaatttttatgaatttcagcacaacttt-tccgaatttgaaatgaaaacggctattgattggtacagaattggtcttaggtgtaaacacgaaagtta 23706794  T
Q  363 taggtatggatgtta 377  Q
    ||| |||||||||||    
T  23706795 tagttatggatgtta 23706809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 22106115 - 22106032
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22106115 gaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagctt 22106032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 23932112 - 23932027
Alignment:
Q  296 ctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23932112 ctgaatttgaaatgaaagctggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 23932027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 23706538 - 23706621
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23706538 gaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 23706621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 24529059 - 24529142
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24529059 gaatttgaaatgaaatctggtattgataggtccttaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 24529142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 32214442 - 32214525
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||| || |||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||    
T  32214442 gaatttaaaatgaaaactggtattgattggtacaaaattggtcttaggtgataacacgaaagttgtaggtatggatgttagctt 32214525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 41523392 - 41523475
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41523392 gaatttgaaatgaaatctggtattgataggtccataattggtcttacgtgtaaacacgaaagttgtaggtatggatgttagctt 41523475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 24368476 - 24368393
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| |||  ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24368476 gaatttgaaatgaaatctggtattgataggtcaatagttggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 24368393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 31559174 - 31559068
Alignment:
Q  22 catcatcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtcc 121  Q
    ||||||||||||| |||| ||||||||| ||||||||||| || |||||||||||||| |||||| || | || ||||||| ||||||||||||||| ||    
T  31559174 catcatcaattgagttgcctatatgtggttgcaacaaaataatgaggatgttcatctccaatttatattacaaccctaaaacgagatattggaaatgccc 31559075  T
Q  122 aaccttt 128  Q
    |||||||    
T  31559074 aaccttt 31559068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 377
Target Start/End: Complemental strand, 24918792 - 24918711
Alignment:
Q  296 ctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    ||||||||||| ||||| ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  24918792 ctgaatttgaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 24918711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 21154327 - 21154410
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| || |||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21154327 gaatttgaaatgaaatctagtattgataggtctagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 21154410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 298 - 379
Target Start/End: Complemental strand, 24682094 - 24682013
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagc 379  Q
    ||||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||| |||||||||||| |||||||||||    
T  24682094 gaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacaaaagttgtaggtgtggatgttagc 24682013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 6726697 - 6726614
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||  ||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6726697 gaatttgaaatgaaatctcatattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 6726614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 22059767 - 22059654
Alignment:
Q  45 tgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgt 144  Q
    ||||| |||||||||||||| || |||||||| || |||| | ||||||| |||||||||||||| |||||||| ||||||| || |||||||| | |||    
T  22059767 tgtggttgcaacaaaatcatgagaatgttcatatccaattcacatgaaaaccctaaaaggagatactggaaatgcccaacctatatggtgagtttgctgt 22059668  T
Q  145 tataatactatgtt 158  Q
    | ||||||| ||||    
T  22059667 tgtaatactttgtt 22059654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 24671675 - 24671592
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||| | ||||| |||||||||||  || || |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  24671675 gaatttggaatgaaatctggtattgatatgtccagaattggtcttaggtgtaaacacaaaagttgtaggtgtggatgttagctt 24671592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 45027418 - 45027497
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    |||||||| || || ||||| ||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  45027418 aatttgaaatggaatctggtgttgataggtccagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttag 45027497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 42827789 - 42827896
Alignment:
Q  51 tgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgttataat 150  Q
    ||||||||||| || || |||||||| || |||| |  ||| || ||||||||||||||||||||||   |||||| || |||||||| | |||| ||||    
T  42827789 tgcaacaaaattatgagaatgttcatatccaattcacttgacaaccctaaaaggagatattggaaatacacaacctatatggtgagtttgctgttgtaat 42827888  T
Q  151 actatgtt 158  Q
    ||| ||||    
T  42827889 actttgtt 42827896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 377
Target Start/End: Complemental strand, 24788086 - 24788053
Alignment:
Q  344 ggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    |||||||||| |||||||||||||||||||||||    
T  24788086 ggtgtaaacatgaaagttgtaggtatggatgtta 24788053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 381
Target Start/End: Original strand, 44584588 - 44584625
Alignment:
Q  344 ggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  44584588 ggtgtaaacacaaaagttgtaggtatgtatgttagctt 44584625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 255 - 379
Target Start/End: Original strand, 17883160 - 17883284
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  17883160 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaaatgaaaactggtattgattggtacagaattggtctttggtgtaaacac 17883259  T
Q  355 gaaagttgtaggtatggatgttagc 379  Q
    |||||||||||||||||||||||||    
T  17883260 gaaagttgtaggtatggatgttagc 17883284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 15892071 - 15892197
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15892071 gaggtcttagtgaaattttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacac 15892170  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||| ||||||    
T  15892171 gaaagttgtaggtatggatgctagctt 15892197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 30676380 - 30676498
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30676380 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 30676479  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  30676480 taggtatggatgttagctt 30676498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 255 - 378
Target Start/End: Complemental strand, 23415464 - 23415341
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  23415464 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaatttgtcttaggtgtaaacac 23415365  T
Q  355 gaaagttgtaggtatggatgttag 378  Q
    ||||||||||||||||||||||||    
T  23415364 gaaagttgtaggtatggatgttag 23415341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 258 - 381
Target Start/End: Complemental strand, 27557219 - 27557096
Alignment:
Q  258 gtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaa 357  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  27557219 gtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactgctattgattggtacataattggtcttaggtgtaaacatgaa 27557120  T
Q  358 agttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||    
T  27557119 agttgtaggtatggatgttagctt 27557096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 1598548 - 1598430
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1598548 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 1598449  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  1598448 taggtatggatgttagctt 1598430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 28288999 - 28289125
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  28288999 gaggtcttagtgaatttttatgaattttagcacaactttgtcagaatttgaaatgaaaactggtattgattggtacataattggtctcaggtgtaaacac 28289098  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
     ||||||||||||||||||||||||||    
T  28289099 aaaagttgtaggtatggatgttagctt 28289125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 33862293 - 33862167
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  33862293 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 33862194  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  33862193 gaaagttgtaggtataaatgttagctt 33862167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 1598741 - 1598623
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  1598741 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataaatggtcttaggtataaacacgaaagttg 1598642  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  1598641 taggtatggatgttagctt 1598623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 12742817 - 12742691
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  12742817 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacac 12742718  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  12742717 gaaagttgtaggtataaatgttagctt 12742691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 255 - 364
Target Start/End: Complemental strand, 12942689 - 12942580
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12942689 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacac 12942590  T
Q  355 gaaagttgta 364  Q
    ||||||||||    
T  12942589 gaaagttgta 12942580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 256 - 381
Target Start/End: Complemental strand, 25689194 - 25689069
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||     
T  25689194 aggtcatagtgaatttttatgaatatcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacaca 25689095  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||    
T  25689094 aaagttgtaggtatggatgttagctt 25689069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 1540574 - 1540700
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||| | ||||||||||||||||||||||    
T  1540574 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgcaaactggtattgattggtatagaattggtcttaggtgtaaacac 1540673  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  1540674 gaaagttgtaggtataaatgttagctt 1540700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 18334263 - 18334381
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18334263 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 18334362  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  18334363 taggtataaatgttagctt 18334381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 24423038 - 24422920
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24423038 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 24422939  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  24422938 taggtataaatgttagctt 24422920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 33864769 - 33864651
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33864769 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 33864670  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  33864669 taggtataaatgttagctt 33864651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 19858589 - 19858705
Alignment:
Q  259 tcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaa 358  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  19858589 tcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattgatcttaggtgtaaacacaaaa 19858688  T
Q  359 gttgtaggtatggatgt 375  Q
    |||||||||||| ||||    
T  19858689 gttgtaggtatgaatgt 19858705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 263 - 370
Target Start/End: Original strand, 19847642 - 19847749
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19847642 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttg 19847741  T
Q  363 taggtatg 370  Q
    ||||||||    
T  19847742 taggtatg 19847749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 2290851 - 2290969
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2290851 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 2290950  T
Q  363 taggtatggatgttagctt 381  Q
    ||| |||  ||||||||||    
T  2290951 tagatataaatgttagctt 2290969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 8055521 - 8055403
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8055521 agtgaatttttatgaatttcagcacaactttatccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 8055422  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  8055421 taggtataaatgttagctt 8055403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 267 - 377
Target Start/End: Complemental strand, 18914420 - 18914310
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  18914420 aatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtatttattggtacataattggtcttaggggtaaacacgaaagttgtagg 18914321  T
Q  367 tatggatgtta 377  Q
    |||||||||||    
T  18914320 tatggatgtta 18914310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 19005643 - 19005525
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||    
T  19005643 agtgaatttttatgaatttcagcacatctttgtccgaatttgaaatgaaaactggtattgattggtacataattagtcttaggtgtaaacacaaaaattg 19005544  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  19005543 taggtatggatgttagctt 19005525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 26924315 - 26924429
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  26924315 aatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactagtattgattggtacagaattgttcttaggtgtaaacacgaaagttgtagg 26924414  T
Q  367 tatggatgttagctt 381  Q
    |||||||||||||||    
T  26924415 tatggatgttagctt 26924429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 256 - 381
Target Start/End: Complemental strand, 25689001 - 25688876
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| |||||||||||||||||||||||||||||||| || ||||||||| | |||||||||||| ||||||||  |||||||||||| ||||||||||    
T  25689001 aggtcatagtgaatttttatgaatttcagcacaactttatccgaatttgaaatcaaaactggtatttattggtaccgaattggtcttagctgtaaacacg 25688902  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||    
T  25688901 aaagttgtaggtatggatgttagctt 25688876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 266 - 381
Target Start/End: Original strand, 31630214 - 31630329
Alignment:
Q  266 gaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtag 365  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  31630214 gaatttttatgaatttcagcacaattttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaatttgtag 31630313  T
Q  366 gtatggatgttagctt 381  Q
    |||| || ||||||||    
T  31630314 gtatagacgttagctt 31630329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 369
Target Start/End: Complemental strand, 25737134 - 25737028
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  25737134 agtgaatttttatgaatttcagcacaactttatccgaatttgaaatgaaaactggtattgattggtacagaattcgtcttaggtgtaaacacgaaagttg 25737035  T
Q  363 taggtat 369  Q
    |||||||    
T  25737034 taggtat 25737028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 22782718 - 22782600
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||  | ||||||||    
T  22782718 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaaatggtattaattggtacagaattggtcttaggtgtaagtaggaaagttg 22782619  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  22782618 taggtatgaatgttagctt 22782600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 26924118 - 26924236
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| | ||| |||||||||| ||||||||    
T  26924118 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattagcctttggtgtaaacatgaaagttg 26924217  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  26924218 taggtataaatgttagctt 26924236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 263 - 361
Target Start/End: Original strand, 8987 - 9085
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagtt 361  Q
    |||||||||||||||||||||||||||||||||| |||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  8987 agtgaatttttatgaatttcagcacaactttgtccgaattttaaatgaaaactggtaatgattggtacagaattggtcttaggtgtaaacacgaaagtt 9085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 270 - 381
Target Start/End: Complemental strand, 18914610 - 18914499
Alignment:
Q  270 ttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtat 369  Q
    |||||||||||| |||||||||| | | |||||| || | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18914610 ttttatgaattttagcacaacttagaccgaattttaaattaatactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtat 18914511  T
Q  370 ggatgttagctt 381  Q
    ||| ||||||||    
T  18914510 ggaagttagctt 18914499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 1871 - 1953
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1871 aatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtacacacgaaagttgtaggtatggatgttagctt 1953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 8830 - 8912
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8830 aatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtacacacgaaagttgtaggtatggatgttagctt 8912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 25535864 - 25535781
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25535864 gaatttgaaatgaaaactggtattgattggtagagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 25535781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 34963830 - 34963747
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34963830 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacatgaaagttgtaggtatggatgttagctt 34963747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 19847485 - 19847567
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  19847485 aatttgaaatgaaaactggtattgattggtacataattggtcctaggtataaacacgaaagttgtaggtatggatgttagctt 19847567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 22981410 - 22981486
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggt 339  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  22981410 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggt 22981486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 23806998 - 23806922
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggt 339  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  23806998 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggt 23806922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 19005801 - 19005718
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||  ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19005801 gaatttgaaatgaaatttggtattgattagtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagctt 19005718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 30676222 - 30676305
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||  || || ||||||||||||||||||||||||||    
T  30676222 gaatttgaaatgaaaactggtattgaatggtacataattggtcttaggtgataagactaaagttgtaggtatggatgttagctt 30676305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 17377576 - 17377636
Alignment:
Q  321 tgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17377576 tgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 17377636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 23992879 - 23992796
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| | ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23992879 gaatttgaaatgaaatccggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtcagctt 23992796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 31630053 - 31630136
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||| || ||||| |||||||||||  ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  31630053 gaatttaaaatgaaatctggtattgataagtacatagttggtcttaggtgtaaacacgaaagttgtagttatggatgttagctt 31630136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 1134507 - 1134655
Alignment:
Q  22 catcatcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtcc 121  Q
    ||||||||| | | |||| ||||||||| ||||| ||||| || |||||||||||||| |||| | |||| || ||||||| ||||||||||||||| ||    
T  1134507 catcatcaaatcagttgcctatatgtggttgcaaaaaaattatgaggatgttcatctccaattcacatgacaa-cctaaaaagagatattggaaatgccc 1134605  T
Q  122 aacctttacggtgagttcgttgttataatactatgtttgttgtatatttt 171  Q
    |||||||| ||||| |  |||||||||||| | ||||| |||| ||||||    
T  1134606 aacctttatggtgaatgtgttgttataatagtttgttttttgtttatttt 1134655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 79 - 158
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    ||||| || |||||||||||||||| | ||||| ||||||||||||||||| |||||||||||| |||||||||||||||    
T  79 aatttaaaatgaaaactggtattgagttgtacaaaattggtcttaggtgtatacacgaaagttgaaggtatggatgttag 158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 1598899 - 1598816
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||||||||||||||| ||| || |||||||| || |||||||||  ||||||||||||||||||||||||||    
T  1598899 gaatttgaaatgaaaactggtattgataggtccagaattggtcataagtgtaaacattaaagttgtaggtatggatgttagctt 1598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 298 - 378
Target Start/End: Complemental strand, 18914775 - 18914695
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    ||||||||| ||||| |||||||||||  || || |||||||||||||||||||||||||||||||||||||  |||||||    
T  18914775 gaatttgaaatgaaatctggtattgataagtccagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttag 18914695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 7799817 - 7799704
Alignment:
Q  45 tgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgt 144  Q
    ||||| |||||||||||||| |  |||||||| || |||| || || ||| |||||||||||||| |||||||| ||||||| || |||||||| | |||    
T  7799817 tgtggttgcaacaaaatcatgaaaatgttcatatccaattcaagtgcaaaccctaaaaggagatactggaaatgcccaacctatatggtgagtttgctgt 7799718  T
Q  145 tataatactatgtt 158  Q
    | ||||||| ||||    
T  7799717 tgtaatactttgtt 7799704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 25689310 - 25689268
Alignment:
Q  333 aattggtcttaggtgtaaacacgaaagttgtaggtatggatgt 375  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  25689310 aattggtcttaggtgtaaacacgaaagttgtaggtgtggatgt 25689268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 2028 - 2068
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaattt 303  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  2028 agtgaatttttatgaatttcagcacaactttgtccgaattt 2068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 314
Target Start/End: Original strand, 229 - 287
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaac 314  Q
    ||||| |||||||||||| |||||||||||||||||||||  |||||||| || |||||    
T  229 aggtcatagtgaatttttgtgaatttcagcacaactttgttcgaatttgacgtcaaaac 287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 381
Target Start/End: Complemental strand, 25737247 - 25737209
Alignment:
Q  343 aggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  25737247 aggtgtaaacacaaaagttgtaggtatggatgttagctt 25737209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 344 - 381
Target Start/End: Original strand, 10905416 - 10905453
Alignment:
Q  344 ggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||| |||||||||||||||||||||||||||    
T  10905416 ggtgtaaacatgaaagttgtaggtatggatgttagctt 10905453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 19401728 - 19401655
Alignment:
Q  45 tgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatg 118  Q
    ||||| |||||||||||||| || |||||||| || |||| |  |||||| |||||||||||||| ||||||||    
T  19401728 tgtggttgcaacaaaatcatgagaatgttcatatccaattcacgtgaaaaccctaaaaggagatactggaaatg 19401655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 19597570 - 19597457
Alignment:
Q  45 tgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgt 144  Q
    ||||| ||||||||||| || || |||||||| || |||| |  ||| || ||||||||||||||||| ||||  ||||||| || |||||||| | |||    
T  19597570 tgtggttgcaacaaaattatgagaatgttcatatccaattcagttgacaaccctaaaaggagatattgaaaatacccaacctatatggtgagtttgctgt 19597471  T
Q  145 tataatactatgtt 158  Q
    | ||||||| ||||    
T  19597470 tgtaatactttgtt 19597457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 19581167 - 19581063
Alignment:
Q  54 aacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgttataatact 153  Q
    |||||||| || || |||||||| || |||| || ||| ||  |||||||||||||||||||||  ||||||| || ||| |||| | |||| |||||||    
T  19581167 aacaaaattatgagaatgttcatatccaattcaattgacaactctaaaaggagatattggaaatacccaacctgtatggttagtttgctgttgtaatact 19581068  T
Q  154 atgtt 158  Q
     ||||    
T  19581067 ttgtt 19581063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 255 - 378
Target Start/End: Complemental strand, 33671 - 33548
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  33671 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 33572  T
Q  355 gaaagttgtaggtatggatgttag 378  Q
     |||||||||||||||||||||||    
T  33571 aaaagttgtaggtatggatgttag 33548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 18153 - 18027
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  18153 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 18054  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
     ||||||||||||||||||||||||||    
T  18053 aaaagttgtaggtatggatgttagctt 18027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 6e-56; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 10732603 - 10732729
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10732603 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacac 10732702  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  10732703 gaaagttgtaggtataaatgttagctt 10732729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 17516834 - 17516952
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17516834 agtgaatttttatgaatttcagcacaactttgtctgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 17516933  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  17516934 taggtatggatgttagctt 17516952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 29346479 - 29346353
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  29346479 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 29346380  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  29346379 gaaagttgtaggtataaatgttagctt 29346353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 29348952 - 29348826
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  29348952 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 29348853  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  29348852 gaaagttgtaggtataaatgttagctt 29348826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 29351425 - 29351299
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  29351425 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 29351326  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  29351325 gaaagttgtaggtataaatgttagctt 29351299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 37804565 - 37804691
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  37804565 gaggtcttagtgaatttttatgaatttcagcacaactttgtcataatttgaaatgaaaactggcattgattggtacataattggtcttaggtgtaaacac 37804664  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  37804665 gaaagttgtaggtatgaatgttagctt 37804691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 20909503 - 20909385
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20909503 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 20909404  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  20909403 taggtataaatgttagctt 20909385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 29330474 - 29330356
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29330474 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 29330375  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  29330374 taggtatgaatgttagctt 29330356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 39363875 - 39363758
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39363875 agtgaatttttatgaatttcagcacaactttgtccgaatt-gaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttg 39363777  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  39363776 taggtatggatgttagctt 39363758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 42245029 - 42245151
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  42245029 aggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaaacacg 42245128  T
Q  356 aaagttgtaggtatggatgttag 378  Q
    ||||||||||||||  |||||||    
T  42245129 aaagttgtaggtataaatgttag 42245151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 381
Target Start/End: Original strand, 20917519 - 20917635
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20917519 tgaatttttatgaatttcagcacaactttgtccgaattcgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgta 20917618  T
Q  365 ggtatggatgttagctt 381  Q
    |||||| ||||||||||    
T  20917619 ggtatgaatgttagctt 20917635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 295945 - 296063
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||| |||| |||||||    
T  295945 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtatacacaaaagttg 296044  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  296045 taggtatggatgttagctt 296063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 39245627 - 39245509
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39245627 agtgaatttttatgaatttgagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttatgtgtaaacacgaaagttg 39245528  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  39245527 taggtataaatgttagctt 39245509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 2154303 - 2154420
Alignment:
Q  264 gtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgt 363  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  2154303 gtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacactaaagttgt 2154402  T
Q  364 aggtatggatgttagctt 381  Q
    ||||||| || |||||||    
T  2154403 aggtatgaatattagctt 2154420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 32027935 - 32027822
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  32027935 tgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacaagaaagttgta 32027836  T
Q  365 ggtatggatgttag 378  Q
    |||||| |||||||    
T  32027835 ggtatgaatgttag 32027822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 256 - 381
Target Start/End: Complemental strand, 32028524 - 32028399
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  32028524 aggtcatagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggttttaggtgaaaacacg 32028425  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||  ||||||||||    
T  32028424 aaagttgtaggtatatatgttagctt 32028399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 20901591 - 20901706
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  20901591 agtgaatttttatgaatttcaacacaactttgtccgattttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacatgaaagttg 20901690  T
Q  363 taggtatggatgttag 378  Q
    ||||||||||||||||    
T  20901691 taggtatggatgttag 20901706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 23065005 - 23064887
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  23065005 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaattaaaactggtattgattggtacagaattggtcttagatataaacacgaaagttg 23064906  T
Q  363 taggtatggatgttagctt 381  Q
    ||||||||||||| |||||    
T  23064905 taggtatggatgtcagctt 23064887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 32028322 - 32028206
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||  | ||||||||||||||||||||||||||||||||    
T  32028322 tgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgta 32028223  T
Q  365 ggtatggatgttagctt 381  Q
    |||||||||||||||||    
T  32028222 ggtatggatgttagctt 32028206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 264439 - 264554
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  264439 agtgaatttttatgaatttcagcacaaccttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttg 264538  T
Q  363 taggtatggatgttag 378  Q
    |||||||  |||||||    
T  264539 taggtataaatgttag 264554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 17516641 - 17516759
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| || ||| || |||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  17516641 agtgaatttttatgaatttcagcacaactttgtccgatttttaaatgaaaaatggtattgattggcacagaattggtcctaggtgtaaacacgaaagttg 17516740  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  17516741 taggtatggatgttagctt 17516759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 256 - 381
Target Start/End: Complemental strand, 32028137 - 32028012
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||| || |||||||||||||| ||||||||||||||||||||||     
T  32028137 aggtcatagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaattgttattgattggtacagaattggtcttaggtgtaaacaca 32028038  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||| |||||  |||||||||||||||    
T  32028037 aaaattgtatttatggatgttagctt 32028012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 38619925 - 38619813
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||| ||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38619925 tgaaattttatgaatttcagcacaactttgtccgaatt-gaaataaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgta 38619827  T
Q  365 ggtatggatgttag 378  Q
    ||||||||||||||    
T  38619826 ggtatggatgttag 38619813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 17516483 - 17516566
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17516483 gaatttgaaatgaaaaccggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 17516566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 20901433 - 20901516
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  20901433 gaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaacgttgtaggtatggatgtcagctt 20901516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 2154145 - 2154227
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2154145 aatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 2154227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 32028677 - 32028592
Alignment:
Q  296 ctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||| ||||| ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32028677 ctgaatttgaaatgaaatctggtattgataggtcaaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 32028592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 20917359 - 20917442
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| | ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  20917359 gaatttgaaatgaaatcaggtattgataggtccataattgatcttaggtgtaaacacgaaagttgtaggtatgaatgttagctt 20917442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 29330632 - 29330549
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| |||  | |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29330632 gaatttgaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagctt 29330549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 295787 - 295870
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| |||||||||||  || |  ||| |||||||||||||| || |||||||||||||||| ||||||||||    
T  295787 gaatttgaaatgaaatctggtattgataagtccggaataggtcttaggtgtaaccatgaaagttgtaggtatgaatgttagctt 295870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 381
Target Start/End: Complemental strand, 22755270 - 22755233
Alignment:
Q  344 ggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  22755270 ggtgtaaacatgaaagttgtagatatggatgttagctt 22755233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 6e-56; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 21841266 - 21841140
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21841266 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 21841167  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  21841166 gaaagttgtaggtatgaatgttagctt 21841140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 16362418 - 16362292
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  16362418 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttgggtgtaaacac 16362319  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||| ||||||||    
T  16362318 gaaagttgtaggtatggaagttagctt 16362292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 21922954 - 21923080
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21922954 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 21923053  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  21923054 gaaagttgtaggtataaatgttagctt 21923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 256 - 381
Target Start/End: Complemental strand, 13227362 - 13227237
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13227362 aggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacg 13227263  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    |||||| || ||||||||||||||||    
T  13227262 aaagttttatgtatggatgttagctt 13227237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 256 - 381
Target Start/End: Complemental strand, 29535550 - 29535425
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29535550 aggtcttagtgaatttttatgaatttcaacacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacg 29535451  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||||||||||||||    
T  29535450 aaagttgtatgtatggatgttagctt 29535425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 29777230 - 29777114
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29777230 tgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaatcacgaaagttgta 29777131  T
Q  365 ggtatggatgttagctt 381  Q
    |||||||||||||||||    
T  29777130 ggtatggatgttagctt 29777114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 27161257 - 27161375
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  27161257 agtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaacaggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttg 27161356  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  27161357 taggtatggatgttagctt 27161375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 29298733 - 29298615
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29298733 agtgaatttttatgaatttcagcacaactttgttcgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 29298634  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  29298633 taggtatgaatgttagctt 29298615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 15859679 - 15859794
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  15859679 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaagcacgaaagttg 15859778  T
Q  363 taggtatggatgttag 378  Q
    ||||||||||||||||    
T  15859779 taggtatggatgttag 15859794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 13989357 - 13989239
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13989357 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 13989258  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  13989257 taggtataaatgttagctt 13989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 31612857 - 31612739
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  31612857 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtaccgaattggtcttaggtgtaaacacgaaagttg 31612758  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  31612757 taggtatgaatgttagctt 31612739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 256 - 381
Target Start/End: Original strand, 16274919 - 16275044
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| |||||||| ||||||||||| ||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16274919 aggtcatagtgaatgtttatgaattttagcacaactctgtccgaattggaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 16275018  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||    
T  16275019 aaagttgtaggtatggatgttagctt 16275044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 21474757 - 21474875
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| |||| |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21474757 agtgaatttttatgaatttcagcacaactttgtccgaatatgaaatgaaaaccggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 21474856  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  21474857 taggtataaatgttagctt 21474875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 22122685 - 22122803
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||    
T  22122685 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgataggtccagaattggtcttaggtgtaaacatgaaagttg 22122784  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||| ||||||    
T  22122785 taggtatggatgctagctt 22122803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 23593396 - 23593522
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||| | ||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||     
T  23593396 gaggtcttagtgaattttcacgaatttcagcacaactttgtccgagtttgaaatgaaaactggtattgattggtgcataattagtcttaggtgtaaacaa 23593495  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  23593496 gaaagttgtaggtatgtatgttagctt 23593522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 265 - 373
Target Start/End: Complemental strand, 31613048 - 31612940
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||| |||||| ||    
T  31613048 tgaatttttatgaatttcagcacaactttgtctgaatttgaactgaaaactggtattgattggtatagaattggtcttaggtgtaaacactaaagttata 31612949  T
Q  365 ggtatggat 373  Q
    |||||||||    
T  31612948 ggtatggat 31612940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 43543358 - 43543275
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43543358 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 43543275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 15859508 - 15859591
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  15859508 gaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtatacacgaaagttgtaggtatgaatgttagctt 15859591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 29298891 - 29298808
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29298891 gaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 29298808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 22050543 - 22050625
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22050543 aatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 22050625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 298 - 378
Target Start/End: Complemental strand, 31613208 - 31613128
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    ||||||||| |||||  |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31613208 gaatttgaaatgaaatatggtattgataggttcataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 31613128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 16401571 - 16401488
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| | ||||||||||||||| |||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  16401571 gaatttgaaataaaaactggtattgatcggtacagaattggtcttaggtgtagacacaaaagttgtaggtatggatgttagctt 16401488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 41372971 - 41372896
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtac 330  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  41372971 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtaaagattggtac 41372896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 10812676 - 10812778
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||| ||||||||||||||||||||| || ||||||||| | ||||||||||||||| |||||  ||||| ||||||||||||||| |||||| |    
T  10812676 agtgaatttctatgaatttcagcacaactttctccgaatttgaaattaaaactggtattgatcggtactgaattgatcttaggtgtaaacatgaaagtcg 10812775  T
Q  363 tag 365  Q
    |||    
T  10812776 tag 10812778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 29777392 - 29777307
Alignment:
Q  296 ctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||| | ||||||||||||||| |||||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||    
T  29777392 ctgaatttgaaataaaaactggtattgatcggtacagaattagtcttaggtgtaaacacaaaagttgtaggtatgtatgttagctt 29777307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 9044711 - 9044790
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    |||||||| | ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |||||||    
T  9044711 aatttgaaataaaaactggtattgatcggtacagaattagtcttaggtgtaaacacgaaagttgtaggtatgtatgttag 9044790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 16274768 - 16274851
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| || || ||||| ||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16274768 gaatttgaaatggaatctggtgttgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 16274851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 22122526 - 22122610
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac-gaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| ||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  22122526 gaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacactaaaagttgtaggtatggatgttagctt 22122610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 361
Target Start/End: Complemental strand, 16401413 - 16401315
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagtt 361  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||||||||||| | |||||| ||||||  ||  ||||||||| |||||||    
T  16401413 agtgaatttttatgaatttcagcacaacttttcccgaatttgaaatgaaaactggtattggtcggtacaaaattggcatttagtgtaaacatgaaagtt 16401315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 317 - 381
Target Start/End: Original strand, 27161118 - 27161182
Alignment:
Q  317 gtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27161118 gtattgataggtccagaattggtcttaggtgtaaacaggaaagttgtaggtatggatgttagctt 27161182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 31815374 - 31815261
Alignment:
Q  45 tgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgt 144  Q
    ||||| |||||||||||||| || |||||||| || |||| | ||||||| |||||||||||||| |||||||| ||||||| || | |||||| | |||    
T  31815374 tgtggttgcaacaaaatcatgagaatgttcatatccaattcacatgaaaaccctaaaaggagatactggaaatgcccaacctatatgatgagtttgctgt 31815275  T
Q  145 tataatactatgtt 158  Q
    | ||||||| ||||    
T  31815274 tgtaatactttgtt 31815261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 298 - 378
Target Start/End: Complemental strand, 40129541 - 40129461
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    ||||||||| |||||  |||||||||| ||| || ||||| |||||||||||||||| ||||||||||||||| |||||||    
T  40129541 gaatttgaaatgaaatatggtattgataggtccagaattgatcttaggtgtaaacactaaagttgtaggtatgaatgttag 40129461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 23573220 - 23573361
Alignment:
Q  22 catcatcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtcc 121  Q
    |||| |||| |||| ||| ||| ||||| ||||||||||  || | |||||| ||||| |||| || ||| ||||||||||||||||| |||||||| ||    
T  23573220 catcttcaactgaaatgcctatttgtggttgcaacaaaacaatgaagatgtttatctcaaattcaactgagaatcctaaaaggagatactggaaatgccc 23573319  T
Q  122 aacctttacggtgagttcgttgttataatactatgtttgttg 163  Q
    ||| |||| ||||||||  ||  ||||||||| || ||||||    
T  23573320 aacatttatggtgagttattttgtataatactttgattgttg 23573361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 7384527 - 7384449
Alignment:
Q  22 catcatcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaa 100  Q
    |||| |||||||| |||| |||||||| |||||||||||| || |||||||||||||| |||| |||| |||| |||||    
T  7384527 catcttcaattgagttgcctatatgtgcgtgcaacaaaattatgaggatgttcatctccaattcaaataaaaaccctaa 7384449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 43630294 - 43630344
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgt 348  Q
    ||||||||| |||||  ||||||||||||||||| ||||||||| ||||||    
T  43630294 gaatttgaaatgaaatatggtattgattggtacagaattggtctcaggtgt 43630344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 5186 - 5068
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5186 agtgaatttttatgaatttcagcacaactttggccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 5087  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  5086 taggtatggatgttagctt 5068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 298 - 378
Target Start/End: Complemental strand, 5344 - 5264
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5344 gaatttgaaatgaaaactgatattgattggtacataattggtcttaggtgtaaacatgaaagttgtaggtatggatgttag 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 6943 - 6825
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6943 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 6844  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  6843 taggtatggatgttagctt 6825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 7101 - 7018
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||| |||| |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7101 gaatatgaaatgaaaattgctattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 7018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 3523 - 3397
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| |||||| |||||||||    
T  3523 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattgttacataattgttcttagttgtaaacac 3424  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  3423 gaaagttgtaggtatggatgttagctt 3397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 107; Significance: 1e-53; HSPs: 3)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 8231 - 8113
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  8231 agtgaatttttatgaatttcagcacaactttgtctgaatttgaaatgaaaactggtattgattagtacagaattggtcttaggtgtaaacacgaaagttg 8132  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  8131 taggtatggatgttagctt 8113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 8424 - 8306
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||| |||||||||| |||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  8424 agtgcatttttatgattttcagcacaactttgtccgaatgtgaaatgaaaactggtattgattggtacataactggtcttaggtgtaaacacaaaagttg 8325  T
Q  363 taggtatggatgttagctt 381  Q
    ||| |||||||||||||||    
T  8324 tagatatggatgttagctt 8306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 8582 - 8499
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  8582 gaatttgaaatggaaactggtattgattggtacataattggtcttacgtgtaaacacaaaagttgtagatatggatgttagctt 8499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 107; Significance: 1e-53; HSPs: 5)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 14447 - 14321
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14447 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacac 14348  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    ||| |||||||||||  ||||||||||    
T  14347 gaacgttgtaggtataaatgttagctt 14321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 23201 - 23319
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||||| |||| || | |||| |||| |||||||||||| |||||||    
T  23201 agtgaatttgtatgaatttcagcacaactttgtccaaatttgaaatgaaaactggtatttattgatatagaattagtctaaggtgtaaacacaaaagttg 23300  T
Q  363 taggtatggatgttagctt 381  Q
    ||||||| |||||||||||    
T  23301 taggtatagatgttagctt 23319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 22883 - 22966
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  22883 gaatttgaaatgaaatctggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtagatatggatgttagctt 22966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 263 - 340
Target Start/End: Original strand, 23041 - 23118
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtc 340  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||||| ||||||||    
T  23041 agtgaatttttatgaatttcagcacaactttttccgaatttgaaatgaaatctggtattgattggtacaaaattggtc 23118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 20716 - 20764
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggt 346  Q
    ||||| ||| ||||| ||| |||||||||||||| ||||||||||||||    
T  20716 gaattggaaatgaaatctgatattgattggtacagaattggtcttaggt 20764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 11789 - 11663
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  11789 gaggtcttagtgaatttttatgaatttcagcacaactttgtcggaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacac 11690  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    || | ||||||||||||||||||||||    
T  11689 gatacttgtaggtatggatgttagctt 11663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 10247386 - 10247512
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  10247386 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 10247485  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  10247486 gaaagttgtaggtataaatgttagctt 10247512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 15465654 - 15465528
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  15465654 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaattggtattgattggtacagaattggtcttaggtgtaaacac 15465555  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  15465554 gaaagttgtaggtatgaatgttagctt 15465528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 15978032 - 15977906
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  15978032 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 15977933  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  15977932 gaaagttgtaggtataaatgttagctt 15977906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 26054927 - 26055053
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||||||||||||||||||||     
T  26054927 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaaggaaaattggtattgattggtacataattggtcttaggtgtaaacat 26055026  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  26055027 gaaagttgtaggtatggatgttagctt 26055053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 29544504 - 29544630
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  29544504 gaggtcttggtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactgttattgattggtacagaattggtcttaggtgtaaacac 29544603  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  29544604 gaaagttgtaggtatggatgttagctt 29544630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 54521322 - 54521196
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  54521322 gaggtcttagtgaatttttatggatttcagcacaactttgtcagaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 54521223  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||    
T  54521222 gaaagttgtgggtatggatgttagctt 54521196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 5223883 - 5223757
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  5223883 gaggtcttagtgaatttttatgaatttcagaacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattcgtcttaggtgtaaacac 5223784  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    ||||||| |||||||||||||||||||    
T  5223783 gaaagttataggtatggatgttagctt 5223757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 10557400 - 10557282
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10557400 agtgaatttttatgaatttcagaacaactttgtccgaatttgaaatgaaaactggtattgattggtaaataattggtcttaggtgtaaacacgaaagttg 10557301  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  10557300 taggtatggatgttagctt 10557282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 28848284 - 28848410
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  28848284 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtactgaattggtcttaggtgtaaacac 28848383  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  28848384 gaaagttgtaggtataaatgttagctt 28848410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 256 - 381
Target Start/End: Original strand, 17444427 - 17444552
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17444427 aggtcatagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaagtgtaaacacg 17444526  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||| ||||||||||    
T  17444527 aaagttgtaggtatgaatgttagctt 17444552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 256 - 381
Target Start/End: Original strand, 20629855 - 20629980
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||     
T  20629855 aggtcatagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaacttgtattgattggtacagaattggtcttaggtgtaaacaca 20629954  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||    
T  20629955 aaagttgtaggtatggatgttagctt 20629980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 7781009 - 7781123
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7781009 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 7781108  T
Q  355 gaaagttgtaggtat 369  Q
     ||||||||||||||    
T  7781109 aaaagttgtaggtat 7781123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 8500012 - 8499894
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8500012 agtgtatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 8499913  T
Q  363 taggtatggatgttagctt 381  Q
    ||| |||||| ||||||||    
T  8499912 tagatatggaagttagctt 8499894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 256 - 381
Target Start/End: Original strand, 16453943 - 16454069
Alignment:
Q  256 aggtcttagtgaatttt-tatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  16453943 aggtcttagtgaattttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 16454042  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  16454043 gaaagttgtaggtataaatgttagctt 16454069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 17463669 - 17463551
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17463669 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 17463570  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  17463569 taggtataaatgttagctt 17463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 34159817 - 34159699
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34159817 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 34159718  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  34159717 taggtataaatgttagctt 34159699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 41124431 - 41124313
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41124431 agtgaatttttatgaatttcagcacaactttgtccgaatgtgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 41124332  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  41124331 taggtatgaatgttagctt 41124313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 55318974 - 55319092
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  55318974 agtgaatttttatgaatttcagcacaactttgtccaaatttgaaatgaaaattggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 55319073  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  55319074 taggtatggatgttagctt 55319092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 45606578 - 45606695
Alignment:
Q  264 gtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgt 363  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45606578 gtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgt 45606677  T
Q  364 aggtatggatgttagctt 381  Q
    ||||||  ||||||||||    
T  45606678 aggtataaatgttagctt 45606695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 253 - 381
Target Start/End: Complemental strand, 13436801 - 13436673
Alignment:
Q  253 aagaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaac 352  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| || |||||| |||||||| |||||||||||||||||||||||||||||| ||||     
T  13436801 aagagatctcagtgaatttttatgaatttcagcacaactttgtccgagtttgaaatgaaaacttgtattgattggtacataattggtcttaggtataaat 13436702  T
Q  353 acgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||||    
T  13436701 acgaaagttgtaggtatggatgttagctt 13436673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 15412920 - 15412805
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15412920 tgaatttttatgaatttcagcacaactttgtccgaatt-gaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgta 15412822  T
Q  365 ggtatggatgttagctt 381  Q
    |||||||||||||||||    
T  15412821 ggtatggatgttagctt 15412805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 263 - 379
Target Start/End: Original strand, 38961508 - 38961624
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  38961508 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaaacacgaaagttg 38961607  T
Q  363 taggtatggatgttagc 379  Q
    |||||||| ||||||||    
T  38961608 taggtatgaatgttagc 38961624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 13153926 - 13154044
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||     
T  13153926 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcataggtgtaaacacgaaagttt 13154025  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  13154026 taggtatgaatgttagctt 13154044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 53301174 - 53301292
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53301174 agtgaatttttatgaatttcagcacaactttgaccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 53301273  T
Q  363 taggtatggatgttagctt 381  Q
    ||||||||||| |||||||    
T  53301274 taggtatggatattagctt 53301292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 265 - 378
Target Start/End: Original strand, 16282430 - 16282543
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16282430 tgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactagtattgattggtacagaattggtcttaggtgtaaacacgaaagttgta 16282529  T
Q  365 ggtatggatgttag 378  Q
    |||||| |||||||    
T  16282530 ggtatgaatgttag 16282543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 46822751 - 46822635
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    |||||||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  46822751 tgaatttttatgaatttcagcacaactttgtccgattttgaaatgaaaagtggtattgattggtaaacaattggtcttaggtgtaaacacgaaagttgta 46822652  T
Q  365 ggtatggatgttagctt 381  Q
    |||||||||||||||||    
T  46822651 ggtatggatgttagctt 46822635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 6468805 - 6468923
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  6468805 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttagctgtaaacacgaaagttg 6468904  T
Q  363 taggtatggatgttagctt 381  Q
     ||||||  ||||||||||    
T  6468905 gaggtataaatgttagctt 6468923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 13151461 - 13151579
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||     
T  13151461 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggaacagaattggtcataggtgtaaacacgaaagttt 13151560  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  13151561 taggtatgaatgttagctt 13151579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 27165744 - 27165626
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  27165744 agtgaatttttatgaatttcaacacaactttgtccgattttgaaatgaaaactggtattgattggtacagaattggtcttaggggtaaacacgaaagttg 27165645  T
Q  363 taggtatggatgttagctt 381  Q
    ||||||||||| |||||||    
T  27165644 taggtatggatcttagctt 27165626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 55476982 - 55476864
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  55476982 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaattaaaactggtattgactggtacagaattggtcttaggtgtaaacacgaaagttg 55476883  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  55476882 taggtataaatgttagctt 55476864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 15007992 - 15007873
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaa---ctggtattgattggtacataattggtcttaggtgtaaacacgaaagtt 361  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||   |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  15007992 tgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaagtactggtattgattggtacaaaattggttttaggtgtaaacacgaaagtt 15007893  T
Q  362 gtaggtatggatgttagctt 381  Q
     |||||||||||||||||||    
T  15007892 ataggtatggatgttagctt 15007873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 381
Target Start/End: Original strand, 16358340 - 16358456
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||    
T  16358340 tgaatttttatgaatttcagcacaattttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacatgaaagtttta 16358439  T
Q  365 ggtatggatgttagctt 381  Q
    | ||| |||||||||||    
T  16358440 gatatagatgttagctt 16358456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 267 - 378
Target Start/End: Complemental strand, 25229744 - 25229633
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| ||    
T  25229744 aatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaattggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgttgg 25229645  T
Q  367 tatggatgttag 378  Q
    |||| |||||||    
T  25229644 tatgaatgttag 25229633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 267 - 378
Target Start/End: Complemental strand, 25237331 - 25237220
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| ||    
T  25237331 aatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaattggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgttgg 25237232  T
Q  367 tatggatgttag 378  Q
    |||| |||||||    
T  25237231 tatgaatgttag 25237220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 12305622 - 12305525
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaac 352  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||    
T  12305622 gaggtcttagtgaatttttatgaatttcagcacaactttgtcagaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaac 12305525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 256 - 377
Target Start/End: Complemental strand, 36528461 - 36528340
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| |||||||| |||||||||||||||||||| ||  | ||||||||| |||||||||||||||||  ||||| |||||||||||| ||||||||||    
T  36528461 aggtcatagtgaatatttatgaatttcagcacaacctttcccgaatttgaaatgaaaactggtattgataagtacagaattggtcttagatgtaaacacg 36528362  T
Q  356 aaagttgtaggtatggatgtta 377  Q
    ||||||||||||||||||||||    
T  36528361 aaagttgtaggtatggatgtta 36528340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 46822911 - 46822828
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46822911 gaatttgaaatgaaaactggtattgattgctacataattggtcttaggtgtaaacacggaagttgtaggtatggatgttagctt 46822828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 291 - 381
Target Start/End: Complemental strand, 12568023 - 12567933
Alignment:
Q  291 tttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||| ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12568023 tttgtccgaatttgaaatgaaaactagtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagctt 12567933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 291 - 381
Target Start/End: Complemental strand, 13544487 - 13544397
Alignment:
Q  291 tttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||| ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13544487 tttgtccgaatttgaaatgaaaactagtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagctt 13544397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 10379772 - 10379701
Alignment:
Q  310 aaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10379772 aaaactggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 10379701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 12119359 - 12119442
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| | |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12119359 gaatttgaaataaaaactggtattgatcagtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 12119442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 41124589 - 41124506
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  41124589 gaatttgaaatgaaaactggtattgattggtaaagaattggtcttaggtgtaaacacaaaagttgtaggtatgaatgttagctt 41124506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 24514133 - 24514050
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24514133 gaatttgaaatgaaatctggtattgatagctccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 24514050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 27165902 - 27165819
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| | |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27165902 gaatttgaaataaaaactagtattgatcggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgtatgttagctt 27165819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 53301016 - 53301099
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| | |||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  53301016 gaatttgaaataaaaacaagtattgatcggtacataattggtcttaggtgtaaacacgaaagttgtaggtatgtatgttagctt 53301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 263 - 377
Target Start/End: Original strand, 3264424 - 3264538
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||| |||||||||||||||||||| ||  ||||||||||| |||||| ||||||||||  ||| | ||||| ||||||||||   |||||||||||    
T  3264424 agtgaatatttatgaatttcagcacaacctttcctgaatttgaaatgaaaattggtattgataagtatagaattgatcttaggtgtcttcacgaaagttg 3264523  T
Q  363 taggtatggatgtta 377  Q
    |||||||||||||||    
T  3264524 taggtatggatgtta 3264538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 263 - 361
Target Start/End: Original strand, 14567555 - 14567653
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagtt 361  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||||||||||| | |||||| |||||| ||| |||||||||| |||||||    
T  14567555 agtgaatttttatgaatttcagcacaacttttcccgaatttgaaatgaaaactggtattggtaggtacagaattggcctttggtgtaaacatgaaagtt 14567653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 13937483 - 13937568
Alignment:
Q  296 ctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||| ||||| ||||||||||| ||   | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13937483 ctgaatttgaaatgaaatctggtattgataggacaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 13937568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 10557558 - 10557475
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||  ||||  ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  10557558 gaatttgaaacgaaatatggtattgattggtacagaattggtcttagttgtaaacacaaaagttgtaggtatggatgttagctt 10557475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 20629704 - 20629787
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  20629704 gaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacaaaagttataggtatggatgttagctt 20629787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 38961350 - 38961433
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||  |||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38961350 gaatttgaaatgaaatatggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 38961433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 55318817 - 55318899
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| ||||| ||||||||||| ||| || || ||||||||||||||||||||||||||||||||||||||| ||||||    
T  55318817 aatttgaaatgaaatctggtattgataggtccagaactggtcttaggtgtaaacacgaaagttgtaggtatggatggtagctt 55318899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 8500170 - 8500087
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| | ||||||||||||||| | || | |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  8500170 gaatttgaaataaaaactggtattgatcgatatagaattggtcttaggtgtaaacacaaaagttgtaggtatagatgttagctt 8500087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 377
Target Start/End: Original strand, 17444276 - 17444355
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    ||||||||| ||||| ||||||||||| ||| || ||||||||||||||||||||| |||||||||| ||||||||||||    
T  17444276 gaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacaggaaagttgtaagtatggatgtta 17444355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 13937644 - 13937709
Alignment:
Q  264 gtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggta 329  Q
    |||||||||||||||||| |||||||||||||| ||||||||| | ||||||||||||||||||||    
T  13937644 gtgaatttttatgaattttagcacaactttgtccgaatttgaaataaaaactggtattgattggta 13937709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 298 - 377
Target Start/End: Original strand, 16282270 - 16282349
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    |||||| || ||||| ||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||||    
T  16282270 gaatttaaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatagatgtta 16282349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 10555812 - 10555766
Alignment:
Q  317 gtattgattggtacataattggtcttaggtgtaaacacgaaagttgt 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10555812 gtattgattggtacataattggtcttaggtgtaaacacgaaagttgt 10555766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 34594665 - 34594771
Alignment:
Q  22 catcatcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtcc 121  Q
    ||||||||||||| |||| ||||| | | ||||| ||||| |  |||||||||||||| |||| | |||| ||||||||||| |||||||| ||||||||    
T  34594665 catcatcaattgagttgcctatatatagttgcaataaaataacgaggatgttcatctccaattcacatgacaatcctaaaagaagatattgaaaatgtcc 34594764  T
Q  122 aaccttt 128  Q
    |||||||    
T  34594765 aaccttt 34594771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 8899482 - 8899418
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||| ||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  8899482 gaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttg 8899418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 14567432 - 14567480
Alignment:
Q  333 aattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14567432 aattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagctt 14567480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 377
Target Start/End: Complemental strand, 17393345 - 17393286
Alignment:
Q  318 tattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    ||||||| |||||| |||||||||||| ||||||||| ||||||||||||||||||||||    
T  17393345 tattgatcggtacagaattggtcttagatgtaaacacaaaagttgtaggtatggatgtta 17393286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 381
Target Start/End: Complemental strand, 36528569 - 36528529
Alignment:
Q  341 ttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36528569 ttaggtgtaaacacgaaagttgtaggtatggatgttagctt 36528529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 5386819 - 5386732
Alignment:
Q  51 tgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagtt 138  Q
    |||||||||| ||| |||||||| || || |||| || |||||| ||||||||||| ||||||||||| ||||| | ||| |||||||    
T  5386819 tgcaacaaaaccatgaggatgttaatatccaattcaattgaaaaccctaaaaggaggtattggaaatgcccaacatataccgtgagtt 5386732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 31200078 - 31200140
Alignment:
Q  96 cctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgttataatactatgtt 158  Q
    ||||||||||||||||||||||  ||||||| || |||||||| | |||| ||||||| ||||    
T  31200078 cctaaaaggagatattggaaatacccaacctatatggtgagtttgatgttgtaatactttgtt 31200140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 381
Target Start/End: Original strand, 16358234 - 16358263
Alignment:
Q  352 cacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||||||    
T  16358234 cacgaaagttgtaggtatggatgttagctt 16358263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 255 - 380
Target Start/End: Complemental strand, 9741 - 9616
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  9741 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtatttattggtacagaattggtcttaggtgtaaacac 9642  T
Q  355 gaaagttgtaggtatggatgttagct 380  Q
    |||||||||||||||| |||||||||    
T  9641 gaaagttgtaggtatgaatgttagct 9616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 257 - 381
Target Start/End: Complemental strand, 68459 - 68335
Alignment:
Q  257 ggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacga 356  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  68459 ggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttatgtgtaaacacga 68360  T
Q  357 aagttgtaggtatggatgttagctt 381  Q
    |||||||| ||||||||||||||||    
T  68359 aagttgtatgtatggatgttagctt 68335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 6446 - 6320
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  6446 gaggtcttaatgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattcattggtacagaattggtcttaggtgtaaacac 6347  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||| ||||||||||    
T  6346 gaaagttgtaggtatgaatgttagctt 6320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 31703 - 31577
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  31703 gaggtcttagtgaatttttatgaatttcatcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 31604  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  31603 gaaagttgtaggtattaatgttagctt 31577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 103; Significance: 4e-51; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 134710 - 134584
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  134710 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacac 134611  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  134610 gaaagttgtaggtataaatgttagctt 134584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 137179 - 137053
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  137179 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacac 137080  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  137079 gaaagttgtaggtataaatgttagctt 137053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 139648 - 139522
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  139648 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacac 139549  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  139548 gaaagttgtaggtataaatgttagctt 139522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 142117 - 141991
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  142117 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacac 142018  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  142017 gaaagttgtaggtataaatgttagctt 141991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 144586 - 144460
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  144586 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacac 144487  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||  ||||||||||    
T  144486 gaaagttgtaggtataaatgttagctt 144460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 103; Significance: 4e-51; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 94902 - 94784
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  94902 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 94803  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  94802 taggtatgaatgttagctt 94784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 256 - 369
Target Start/End: Original strand, 17103 - 17216
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| | |||||||||||||||||||||||    
T  17103 aggtcatagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaacttgtattgattggtatagaattggtcttaggtgtaaacacg 17202  T
Q  356 aaagttgtaggtat 369  Q
    ||||||||||||||    
T  17203 aaagttgtaggtat 17216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 16953 - 17035
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| |||||||||||||||||||||||| |||| || ||||| |  ||||||||||||||||||||||||||||||||    
T  16953 aatttgaaatgaaaactggtattgattggtacagaatttgtgttaggggataacacgaaagttgtaggtatggatgttagctt 17035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 19751 - 19877
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| | |||||||||||||||||||| |    
T  19751 gaggtcttagtgaatttttatgaatttcagcaaaactttgtccgaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacgc 19850  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
     ||||||||||||||||||||||||||    
T  19851 aaaagttgtaggtatggatgttagctt 19877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 38313 - 38195
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38313 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 38214  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||  ||||||||||    
T  38213 taggtataaatgttagctt 38195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 39832 - 39706
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  39832 gaggtcttagtgaacttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacac 39733  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
     |||||||||| |||||||||||||||    
T  39732 aaaagttgtagttatggatgttagctt 39706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 99; Significance: 9e-49; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 43231 - 43113
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  43231 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacatttttggtcttaggtgtaaacacgaaagttg 43132  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||| ||||||||||    
T  43131 taggtatgaatgttagctt 43113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 43389 - 43306
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| |||  | |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  43389 gaatttgaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacaaaagttgtaggtatgaatgttagctt 43306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 13379 - 13415
Alignment:
Q  345 gtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||||||||||||    
T  13379 gtgtaaacacgaaagttgtaggtatggatgttagctt 13415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 1746 - 1634
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1746 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaattggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttg 1647  T
Q  363 taggtatggatgt 375  Q
    |||||||||||||    
T  1646 taggtatggatgt 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 1906 - 1821
Alignment:
Q  296 ctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||| ||||| ||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1906 ctgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacaagaaagttgtaggtatggatgttagctt 1821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 6606 - 6721
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6606 agtgaattttaatgaatttcagcacaactttgtccgaatttgaaatgaaaattggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 6705  T
Q  363 taggtatggatgttag 378  Q
    ||||||||||||||||    
T  6706 taggtatggatgttag 6721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 298 - 378
Target Start/End: Original strand, 6448 - 6528
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    ||||||||| |||||  |||||||||| ||| || |||||||||||| |||||||||||||||||||||||||||||||||    
T  6448 gaatttgaaatgaaatgtggtattgataggtccagaattggtcttagctgtaaacacgaaagttgtaggtatggatgttag 6528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 21248 - 21121
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagt-gaaaactggtattgattggtacataattggtcttaggtgtaaaca 353  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  21248 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatagaaaactggtattgattggtacagaattggtcttaggtgtaaaca 21149  T
Q  354 cgaaagttgtaggtatggatgttagctt 381  Q
     |||||||||||||||  ||||||||||    
T  21148 agaaagttgtaggtataaatgttagctt 21121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 3784 - 3898
Alignment:
Q  267 aatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagg 366  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  3784 aatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtggaaacacgaaagttgtagg 3883  T
Q  367 tatggatgttagctt 381  Q
    ||| |||||||||||    
T  3884 tattgatgttagctt 3898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 3973 - 4091
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||    
T  3973 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcataggtgtaaacatgaaaggtg 4072  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  4073 taggtatggatgttagctt 4091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 3588 - 3705
Alignment:
Q  264 gtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgt 363  Q
    |||||||||||||||||||| ||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  3588 gtgaatttttatgaatttcaacacaagtttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttagctgtaaacatgaaagttgt 3687  T
Q  364 aggtatggatgttagctt 381  Q
    ||||||||||||||||||    
T  3688 aggtatggatgttagctt 3705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 8518 - 8392
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacac 354  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||||||| | ||||| |||||||||||||||     
T  8518 gaggtcttagtgaatttttatgaatttcagcacagctttgtccgaatttgaaatgaaaactgatattgattggtatagaattgctcttaggtgtaaacat 8419  T
Q  355 gaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||    
T  8418 gaaagttgtaggtatggatgttagctt 8392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 10283 - 10165
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||   ||||||||||||||||||||||||||||    
T  10283 agtgaatttttatgaatttcagcacaactttgactgaatttgaaatgaaaactagtattgattggtacagtgttggtcttaggtgtaaacacgaaagttg 10184  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  10183 taggtatggatgttagctt 10165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 10474 - 10361
Alignment:
Q  265 tgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 364  Q
    ||||||||| ||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  10474 tgaatttttgtgaatttcagcacaactttatctgaatttaaaatgaaaactggtattgattggtacataattggtcttatgtgtcaacacgaaagttgta 10375  T
Q  365 ggtatggatgttag 378  Q
    ||||||||||||||    
T  10374 ggtatggatgttag 10361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 381
Target Start/End: Complemental strand, 10633 - 10551
Alignment:
Q  299 aatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10633 aatttgaactgaaatctggtattgataggtccataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 10551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 94; Significance: 9e-46; HSPs: 3)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 256 - 381
Target Start/End: Complemental strand, 1088 - 963
Alignment:
Q  256 aggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacg 355  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||  ||| |||||||| |||||||||    
T  1088 aggtcatagtgaatttttatgaatttcagcacaactttgtccgaatttgaaataaaaactggtattgattggtacagcattcgtcttaggagtaaacacg 989  T
Q  356 aaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||    
T  988 aaagttgtaggtatggatgttagctt 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 1224 - 1156
Alignment:
Q  313 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1224 actggtattgattggtacataattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagctt 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 1358 - 1275
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||  ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1358 gaatttgaaatgaaatctcatattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 1275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 92; Significance: 1e-44; HSPs: 4)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 11010 - 11125
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||  |||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11010 agtgaattttcctgaatttcagcacaactttgtccgaatttgaaatgaaaattggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 11109  T
Q  363 taggtatggatgttag 378  Q
    ||||||||||||||||    
T  11110 taggtatggatgttag 11125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 15404 - 15296
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||| |||||||||||||||||||||||||  ||||||||| ||||||||||||  ||||          ||||||||||||||| |||||||||||    
T  15404 agtgaatgtttatgaatttcagcacaactttgttcgaatttgaaatgaaaactggtacagatt----------tggtcttaggtgtaaccacgaaagttg 15315  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  15314 taggtatggatgttagctt 15296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 298 - 378
Target Start/End: Original strand, 10852 - 10932
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttag 378  Q
    ||||||||| |||||  |||||||||| ||| || |||||||||||| |||||||||||||||||||||||||||||||||    
T  10852 gaatttgaaatgaaatgtggtattgataggtccagaattggtcttagctgtaaacacgaaagttgtaggtatggatgttag 10932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 15561 - 15479
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| |||||||| || ||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  15561 gaatttgaaatgaaatctggtattaataggtccagaattggtcttag-tgtaaacacgaaagttgtaggtatggacgttagctt 15479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 369
Target Start/End: Complemental strand, 13884 - 13778
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  13884 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttg 13785  T
Q  363 taggtat 369  Q
    |||||||    
T  13784 taggtat 13778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 40891 - 40773
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40891 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaattaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttg 40792  T
Q  363 taggtatggatgttagctt 381  Q
    ||| |||  ||||||||||    
T  40791 tagatataaatgttagctt 40773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 30511 - 30393
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||||||||||| |||||||||| ||||||||||  |||||||    
T  30511 agtgaatttttatgaatttcaacacaactttgtccgattttgaaatgaaaactggtattgattggtacagaattggtcttcggtgtaaacattaaagttg 30412  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  30411 taggtatggatgttagctt 30393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 30669 - 30586
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30669 gaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 30586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 7361 - 7478
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||| ||||  ||||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  7361 agtgaatttttatgaatttcagcacaacattgttcgaatttgaaatgaaa-ctggtattgattggtacagaattggtcttgggtgtaaacacaaaagttg 7459  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  7460 taggtatggatgttagctt 7478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 263 - 369
Target Start/End: Original strand, 7168 - 7274
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| || || |||||||||||||||| | |||  |||||||||||||||||||||||||    
T  7168 agtgactttttatgaatttcagcacaactttgtccgaatttgaaatgcaatctggtattgattggtaaagaatatgtcttaggtgtaaacacgaaagttg 7267  T
Q  363 taggtat 369  Q
    |||||||    
T  7268 taggtat 7274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 7553 - 7621
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtaca 331  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  7553 agtgaaattttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtaca 7621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 18587 - 18504
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18587 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagctt 18504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 18429 - 18352
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtc 340  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| || |||||    
T  18429 agtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggcattgattggtacagaaatggtc 18352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 71; Significance: 5e-32; HSPs: 3)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 699 - 581
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||||| |||| || | |||| |||| |||||||||||| |||||||    
T  699 agtgaatttgtatgaatttcagcacaactttgtccaaatttgaaatgaaaactggtatttattgatatagaattagtctaaggtgtaaacacaaaagttg 600  T
Q  363 taggtatggatgttagctt 381  Q
    ||||||| |||||||||||    
T  599 taggtatagatgttagctt 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 1017 - 934
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  1017 gaatttgaaatgaaatctggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtagatatggatgttagctt 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 859 - 782
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtc 340  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||||| ||||||||    
T  859 agtgaatttttatgaatttcagcacaactttttccgaatttgaaatgaaatctggtattgattggtacaaaattggtc 782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 71; Significance: 5e-32; HSPs: 3)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 263 - 381
Target Start/End: Original strand, 36869 - 36987
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    ||||||||||||||||||||||||||||||| ||  |||||||| ||||||||  |||||||||| | | |||| ||| ||| |||||||||||||||||    
T  36869 agtgaatttttatgaatttcagcacaactttatcaaaatttgaaatgaaaactaatattgattggaaaaaaattagtcatagatgtaaacacgaaagttg 36968  T
Q  363 taggtatggatgttagctt 381  Q
    |||||||||||||||||||    
T  36969 taggtatggatgttagctt 36987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 36749 - 36790
Alignment:
Q  336 tggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36749 tggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 36790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 37061 - 37110
Alignment:
Q  262 tagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaa 311  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  37061 tagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaa 37110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 501556 - 501439
Alignment:
Q  263 agtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttg 362  Q
    |||||||||||||||||||||||||||| ||||  ||||||||| |||||| || ||||||||| |||| ||||||||||| ||||||||||||||||||    
T  501556 agtgaatttttatgaatttcagcacaacattgtgcgaatttgaaatgaaaagtgatattgattgttacagaattggtcttatgtgtaaacacgaaagttg 501457  T
Q  363 taggtatggatgttagctt 381  Q
    |||| || |||||||||||    
T  501456 tagg-atagatgttagctt 501439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 501714 - 501631
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||| ||||||||||| |||  | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  501714 gaatttgaaatgaaatctggtattgataggtcaagaactggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 501631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 75605 - 75689
Alignment:
Q  293 tgtctgaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    |||| ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  75605 tgtccgaatttgaaatgaaaactagtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 75689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 229 - 312
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  229 gaatttgaaatgaaaactggtattgattggtacataaatggtcttaggtgtaaacaagaaagttataggtatggatgttagctt 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 76 - 1
Alignment:
Q  255 gaggtcttagtgaatttttatgaatttcagcacaactttgtctgaatttgaagtgaaaactggtattgattggtac 330  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  76 gaggtcttagtgaatttttatgaatttcagcacaactttgtccgaatttgaaatgaaaactggtattgattggtac 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 3861 - 3748
Alignment:
Q  45 tgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtccaacctttacggtgagttcgttgt 144  Q
    ||||| |||||||||||||| || |||||||| || |||| | ||||||| |||||||||||||| |||||||| ||||||| || |||||||| | |||    
T  3861 tgtggttgcaacaaaatcatgagaatgttcatatccaattcacatgaaaaccctaaaaggagatactggaaatgcccaacctatatggtgagtttgctgt 3762  T
Q  145 tataatactatgtt 158  Q
    | ||||||| ||||    
T  3761 tgtaatactttgtt 3748  T

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Target: scaffold0021 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 476 - 398
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtt 376  Q
    ||||||||| | ||| ||||||||||| ||| || |||||||||||||||||||||||||||| ||| |||||||||||    
T  476 gaatttgaaataaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagtcgtacgtatggatgtt 398  T

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Target: scaffold0140 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 35914 - 36055
Alignment:
Q  22 catcatcaattgaattgcttatatgtgggtgcaacaaaatcataaggatgttcatctctaatttaaatgaaaatcctaaaaggagatattggaaatgtcc 121  Q
    |||| ||||||||| ||| ||| ||||| ||||||||||  || | |||||| ||||| |||| || ||| || |||||||||||||| |||||||| ||    
T  35914 catcttcaattgaaatgcctatttgtggttgcaacaaaacaatgaagatgtttatctcaaattcaattgacaaccctaaaaggagatactggaaatgccc 36013  T
Q  122 aacctttacggtgagttcgttgttataatactatgtttgttg 163  Q
    ||| |||| ||||||||  ||  ||||||||| |||||||||    
T  36014 aacatttatggtgagttattttgtataatactttgtttgttg 36055  T

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Target: scaffold0022 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 53612 - 53660
Alignment:
Q  333 aattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  53612 aattggtcttagctgtaaacacgaaagttgtaggtatggatgttagctt 53660  T

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Target: scaffold0074 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 381
Target Start/End: Original strand, 38361 - 38444
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||| | |||| | ||||||||  ||| | ||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  38361 gaatttgaaataaaaattagtattgatccgtaaagaattgatcttagggctaaacacgaaagttgtaggtatggatgttagctt 38444  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 377
Target Start/End: Complemental strand, 113473 - 113394
Alignment:
Q  298 gaatttgaagtgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 377  Q
    ||||||||| | ||||||||||||||| ||| |  | |||| ||| | |||||||| | |||||||||||||||||||||    
T  113473 gaatttgaaataaaaactggtattgatcggtgcggatttggcctttgatgtaaacatggaagttgtaggtatggatgtta 113394  T

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Target: scaffold1427 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 381
Target Start/End: Complemental strand, 1831 - 1802
Alignment:
Q  352 cacgaaagttgtaggtatggatgttagctt 381  Q
    ||||||||||||||||||||||||||||||    
T  1831 cacgaaagttgtaggtatggatgttagctt 1802  T

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Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 381
Target Start/End: Complemental strand, 53978 - 53941
Alignment:
Q  344 ggtgtaaacacgaaagttgtaggtatggatgttagctt 381  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  53978 ggtgtaaacatgaaagttgtaggtatggacgttagctt 53941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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