View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0671_high_7 (Length: 409)

Name: NF0671_high_7
Description: NF0671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0671_high_7
NF0671_high_7
[»] chr7 (7 HSPs)
chr7 (13-188)||(8457068-8457245)
chr7 (14-186)||(18815278-18815453)
chr7 (13-181)||(27987457-27987628)
chr7 (259-358)||(4077589-4077688)
chr7 (264-358)||(34232018-34232112)
chr7 (66-110)||(5196847-5196891)
chr7 (13-121)||(24819858-24819966)
[»] chr1 (10 HSPs)
chr1 (13-188)||(26996124-26996302)
chr1 (259-358)||(30110652-30110751)
chr1 (13-188)||(24544941-24545118)
chr1 (259-358)||(10710888-10710987)
chr1 (259-358)||(17708293-17708392)
chr1 (259-358)||(26720947-26721046)
chr1 (259-358)||(47106410-47106509)
chr1 (14-102)||(28520809-28520897)
chr1 (13-121)||(10004092-10004200)
chr1 (13-121)||(27030113-27030221)
[»] scaffold0289 (1 HSPs)
scaffold0289 (14-173)||(11227-11387)
[»] chr4 (9 HSPs)
chr4 (259-358)||(53780359-53780458)
chr4 (14-188)||(25135466-25135643)
chr4 (259-354)||(53486684-53486779)
chr4 (259-358)||(10563058-10563157)
chr4 (259-358)||(20395896-20395995)
chr4 (259-348)||(34322056-34322145)
chr4 (259-346)||(42778552-42778639)
chr4 (13-131)||(24059804-24059924)
chr4 (13-102)||(36279175-36279264)
[»] chr6 (8 HSPs)
chr6 (259-358)||(649793-649892)
chr6 (259-358)||(17078918-17079017)
chr6 (259-358)||(18051176-18051275)
chr6 (272-348)||(17873556-17873632)
chr6 (259-346)||(9198991-9199078)
chr6 (259-358)||(11060589-11060688)
chr6 (23-114)||(17228107-17228198)
chr6 (13-121)||(2894398-2894506)
[»] scaffold0007 (1 HSPs)
scaffold0007 (259-358)||(182429-182528)
[»] chr5 (4 HSPs)
chr5 (259-358)||(20208446-20208545)
chr5 (259-358)||(4415427-4415526)
chr5 (259-348)||(6049535-6049624)
chr5 (304-358)||(7000492-7000546)
[»] chr3 (6 HSPs)
chr3 (259-358)||(26846181-26846280)
chr3 (355-409)||(43563355-43563409)
chr3 (259-358)||(47537582-47537681)
chr3 (259-358)||(48192113-48192212)
chr3 (267-358)||(50544546-50544637)
chr3 (13-114)||(9819221-9819322)
[»] scaffold0179 (2 HSPs)
scaffold0179 (259-358)||(7842-7941)
scaffold0179 (259-358)||(12776-12875)
[»] scaffold0912 (1 HSPs)
scaffold0912 (259-346)||(2612-2699)
[»] chr2 (2 HSPs)
chr2 (260-346)||(1380397-1380483)
chr2 (13-102)||(30276050-30276139)
[»] chr8 (3 HSPs)
chr8 (298-358)||(23680515-23680575)
chr8 (259-358)||(45255556-45255655)
chr8 (259-358)||(17659145-17659244)


Alignment Details
Target: chr7 (Bit Score: 155; Significance: 4e-82; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 8457245 - 8457068
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8457245 aatattaacctttaacgaaaccgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 8457146  T
Q  113 actgtgtatttgttggaagggtaaagttttcac--acacctatcagccatgtcaacctacaaacaagaacagacaacc 188  Q
    || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  8457145 acggtgtatttgttggaagggtaaagttttcacacacacctatcagccatgtcaacctacaaacaagaacaaacaacc 8457068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 18815453 - 18815278
Alignment:
Q  14 atattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgca 113  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| |||  |||||||| ||||||||||||||| ||||||||||    
T  18815453 atattaacctttaacggaaccgctttatgccacaaaaaatgatgaaaatcctcagtaatattagggtcaaccgctgttaagtaagaataagcagattgca 18815354  T
Q  114 ctgtgtatttgttggaagggtaaagttttcacac--acctatcagccatgtcaacctac-aaacaagaacagacaa 186  Q
    | ||||||||||||||||| | |||||| |||||  |||||||||||||| |||| | | ||||||||||||||||    
T  18815353 cggtgtatttgttggaaggatgaagtttccacaccaacctatcagccatgccaacttgcaaaacaagaacagacaa 18815278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 27987628 - 27987457
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||||||||||||||| |||||||    
T  27987628 aatattaacctttaacggaaccgctttatgccacaaaaaatgatgaaaatcctcagtaatattagtatcaaccgctgttaagtaagaatacgtagattgc 27987529  T
Q  113 actgtgtatttgttggaagggtaaagttttcaca--cacctatcagccatgtcaacctac-aaacaagaaca 181  Q
    |   |||||||||||||| ||| |||||| ||||  ||||||||||||||| |||||| | |||||||||||    
T  27987528 aagatgtatttgttggaatggtgaagtttccacacccacctatcagccatgccaacctgcaaaacaagaaca 27987457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 4077589 - 4077688
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| ||||||||||   |||| ||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||||    
T  4077589 gctcaacaccaagagagaacaaacacgccaccgtaatggatttgttctcagaaagatcaaacaaccgaggaaaccgctcacaaaaaggaaccgatcctaa 4077688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 34232018 - 34232112
Alignment:
Q  264 acaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    ||||||| ||||||||| ||||||| || |||  | || |||||||||||||| ||||| |||| ||||| |||||| ||||||| |||||||||    
T  34232018 acaccaagagagaacaagtctgccaccgaaatggacttattctcagaaagatcgaacaatctagaaaaccgctcacacaaagaaaccgatcctaa 34232112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 5196847 - 5196891
Alignment:
Q  66 cagtaatgttattgtcaaccgttgttaagtaagaatacgcagatt 110  Q
    ||||||||||| |||||||||| || ||||||||||| |||||||    
T  5196847 cagtaatgttaatgtcaaccgtcgtgaagtaagaataagcagatt 5196891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 24819858 - 24819966
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    |||||| || ||||| | ||| |||||| ||||  |||| |||| ||||||  |||| |||||| |||| || | ||||||||||||||| ||||| |||    
T  24819858 aatattgacttttaagggaaccgctttaagccataaaaattgatcaaaatctgcagtgatgttagtgtccactgctgttaagtaagaataagcagaatgc 24819957  T
Q  113 actgtgtat 121  Q
    || ||||||    
T  24819958 accgtgtat 24819966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 26996124 - 26996302
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    ||||||||||||||||| ||  ||||| | |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  26996124 aatattaacctttaacggaatcgctttcttccacaaaaaatgatgaaaatcctcagtaatattattatcaaccgttgttaagtaagaataagcagattgc 26996223  T
Q  113 actgtgtatttgttggaagggtaaagttttcaca--cacctatcagccatgtcaacctac-aaacaagaacagacaacc 188  Q
    || |||||||||||||||||||  ||||| ||||  |||||||||||||||||||||| | ||||||||||||||||||    
T  26996224 acggtgtatttgttggaagggtgtagtttccacacccacctatcagccatgtcaacctgcaaaacaagaacagacaacc 26996302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 30110751 - 30110652
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||||||||||| |||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  30110751 gctctacaccaagagagaacaaacctgccaccgtaatagatttgttctcagaaagatcaaacaacctaggaaacctctcacaaaaagaaaccgatcctaa 30110652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 24545118 - 24544941
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    ||||||||| ||||||| |||  ||||||| ||| ||||||||||||| |||||||||| ||||| ||||| || | ||||||||||||||||||||| |    
T  24545118 aatattaacttttaacggaaccactttatgacac-aaaaatgatgaaattcctcagtaacgttatcgtcaatcgctattaagtaagaatacgcagattac 24545020  T
Q  113 actgtgtatttgttggaagggtaaagttttcaca--cacctatcagccatgtcaacctac-aaacaagaacagacaacc 188  Q
    ||| |||||||||||||||| | |||||| ||||  |||||||||||| || |||||| | |||||| |||||||||||    
T  24545019 actatgtatttgttggaaggatgaagtttccacacccacctatcagccgtgccaacctgcaaaacaacaacagacaacc 24544941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 10710987 - 10710888
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    ||||||||| || |||||||||| |||||| ||||||  |||||||||||||||||||||||||||||||||| | |||||||||||| | |||||||||    
T  10710987 gctctacactaagagagaacaaacctgccaccgtaatggatttgttctcagaaagatcaaacaacctaggaaatcgctcacaaaaagagaccgatcctaa 10710888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 17708293 - 17708392
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| ||||||||| ||||||| ||||||  ||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  17708293 gctcaacaccaagagagaacaagtctgccaccgtaatggatttgttctcagaaagatcgaacaacctaggaaaccgctcacacaaagaaaccgatcctaa 17708392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 26720947 - 26721046
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||  |||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||| |||||    
T  26720947 gctcaacaccaagagagaacaatcctgccaccgtaatagatttgttctcagcaagatcaaacaacctaggaaaccgctcacacaaagaaaccgaccctaa 26721046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 47106509 - 47106410
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||||| || || ||| ||||  ||||||||    
T  47106509 gctcaacaccaagagagaacaaacctgccaccgtaatgaatttattctcagaaagatcaaacaacctaggaaacctcttacgaaacgaaactgatcctaa 47106410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 28520897 - 28520809
Alignment:
Q  14 atattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata 102  Q
    ||||| |||||||||||||| |||||| ||||| |||| |||||||| || ||| | |||||| |||||||| ||||||| ||||||||    
T  28520897 atattcacctttaacgaaaccgctttaagccacaaaaattgatgaaactcttcaatgatgttaatgtcaaccattgttaaataagaata 28520809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 10004092 - 10004200
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    |||||| || ||||| | ||| |||||| ||||  |||| |||| ||||||  |||| |||||| |||| |||| ||||||||||||||| ||||| |||    
T  10004092 aatattgacttttaaaggaaccgctttaagccataaaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaataagcagaatgc 10004191  T
Q  113 actgtgtat 121  Q
    || ||||||    
T  10004192 accgtgtat 10004200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 27030113 - 27030221
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    |||||| || ||||| | ||| |||||| ||||  |||| |||| ||||||  |||| |||||| |||| |||| ||||||||||||||| ||||| |||    
T  27030113 aatattgacttttaagggaaccgctttaagccataaaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaataagcagaatgc 27030212  T
Q  113 actgtgtat 121  Q
    || ||||||    
T  27030213 accgtgtat 27030221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 11227 - 11387
Alignment:
Q  14 atattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgca 113  Q
    |||||||||||||||| |||  |||| |||||| ||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||| ||||||||||    
T  11227 atattaacctttaacggaacctctttgtgccacaaaaaatgatgaaaatcctcagtaatattagtgtcaactgctgttaagtaagaataagcagattgca 11326  T
Q  114 ctgtgtatttgttggaagggtaaagttttcaca-cacctatcagccatgtcaacctacaaa 173  Q
    | |||||||| || |||||||  ||||| |||| || | |||||||||| |||||| ||||    
T  11327 cagtgtatttattcgaagggtggagtttccacaccatccatcagccatgccaacctgcaaa 11387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 53780359 - 53780458
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  53780359 gctcaacaccaagagagaacaaacctgccatcgtaatggatttgttctcagaaagatcaaacaacctaggaaaccgctcacaaaaagaaaccgaacctaa 53780458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 25135466 - 25135643
Alignment:
Q  14 atattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctca-gtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    |||||||||||||| | ||| |||||| ||||  |||||| ||||||||| | | ||||| ||| ||||||||| |||||| |||||||| |||||||||    
T  25135466 atattaacctttaatggaaccgctttaagccaaaaaaaattatgaaaatcttaaagtaatattagtgtcaaccgctgttaaataagaataagcagattgc 25135565  T
Q  113 actgtgtatttgttggaagggtaaag-ttttcacacacctatcagccatgtcaacctaca-aacaagaacagacaacc 188  Q
    || |||||||||| |||||| | ||| ||  ||| ||||||||||||||| |||||| || |||||||||||||||||    
T  25135566 acggtgtatttgtgggaaggatgaagcttcccacccacctatcagccatgccaacctgcataacaagaacagacaacc 25135643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 53486779 - 53486684
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatc 354  Q
    |||||||||||| ||| ||||| ||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||| |||||||| |||||    
T  53486779 gctctacaccaagagaaaacaagtctgccatcgtaatggatttgttctcagaaagatcgaacaacctaggaaaccgctcaccaaaagaaaccgatc 53486684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 10563157 - 10563058
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||| |||||| ||||||   ||||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||    
T  10563157 gctcaacaccaagagagaacaaacctgccaccgtaatgggtttgttctcagaaagatcaaacaacctaggaaactgctcacaaaaagaaaccgaacctaa 10563058  T

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Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 20395896 - 20395995
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||| |||| | || |||  |||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||    
T  20395896 gctcaacaccaagagagaacaaacctgcgaccgaaatggatttgttctcagaaagatcaaacaacctaggaaaccgctcacaaaaagagaccgatcctaa 20395995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 34322145 - 34322056
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaa 348  Q
    |||| ||||||| ||||||||| ||||||| ||||||  |||||||||||| |||||| |||||||||||||||| |||||| |||||||    
T  34322145 gctcaacaccaagagagaacaagtctgccaccgtaatggatttgttctcagcaagatcgaacaacctaggaaaccgctcacacaaagaaa 34322056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 346
Target Start/End: Original strand, 42778552 - 42778639
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaaga 346  Q
    |||||||||||| ||| ||||||||||||| || ||| ||||| ||| |||| ||||| |||||||||||||||| ||||||||||||    
T  42778552 gctctacaccaagagaaaacaaatctgccaccgaaatgaatttattcacagagagatcgaacaacctaggaaaccgctcacaaaaaga 42778639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 24059804 - 24059924
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattg- 111  Q
    ||||||||| ||||||||||| | ||||||  |   ||||||| ||||||||||| |||| ||||||||||   |||||||||||||||| ||| ||||     
T  24059804 aatattaacttttaacgaaaccgttttatgttatagaaaatgacgaaaatcctcactaatattattgtcaaatattgttaagtaagaataagcatattgt 24059903  T
Q  112 -cactgtgtatttgttggaag 131  Q
     ||| ||||||||||||||||    
T  24059904 acacggtgtatttgttggaag 24059924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 36279264 - 36279175
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata 102  Q
    ||||||||| ||||| | ||| |||||| ||||  |||| |||| ||||||  |||| |||||| |||| |||| |||||||||||||||    
T  36279264 aatattaacttttaagggaaccgctttaagccataaaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaata 36279175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 649892 - 649793
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||||||||||| ||| |||||  |||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  649892 gctctacaccaagagaaaacaagcctgccatcgtaatggatttgttctcagaaagatcgaacaacctaggaaaccgctcacaaaaagaaaccgatcctaa 649793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 17079017 - 17078918
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||||||||||| |||||||||| |||||| ||||||  ||||||||||||||||| |||||||||||||||||| |||||||||||| | |||||||||    
T  17079017 gctctacaccaagagagaacaaacctgccaccgtaatggatttgttctcagaaagaacaaacaacctaggaaaccgctcacaaaaagagaccgatcctaa 17078918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 18051275 - 18051176
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||| |||||| ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||    
T  18051275 gctcaacaccaagagagaacaaacctgccaccgtaatggatttgttctcagaaagatcaaacaacctaggaaaccgctcacaaaaagagaccgatcctaa 18051176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 17873632 - 17873556
Alignment:
Q  272 agagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaa 348  Q
    ||||||||||  ||||| ||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17873632 agagaacaaacttgccaccgtaatgtatttgttctcagaaagatcaaacaacctaggaaaccgctcacaaaaagaaa 17873556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 346
Target Start/End: Complemental strand, 9199078 - 9198991
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaaga 346  Q
    ||||||||| || ||| ||||| ||||||| || ||| ||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  9199078 gctctacacaaagagaaaacaagtctgccaccgaaatgaatttgttcacagaaagatcgaacaacctaggaaaccgctcacaaaaaga 9198991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 11060688 - 11060589
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||| | ||||||  |||||  ||||||||||||||||||| |||||||||||||||| |||||| ||||||| ||| |||||    
T  11060688 gctccacaccaagagagaacagacctgccactgtaatgtatttgttctcagaaagatcgaacaacctaggaaacctctcacagaaagaaaccgaacctaa 11060589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 17228107 - 17228198
Alignment:
Q  23 tttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgcac 114  Q
    ||||||| |||||||||| ||||| ||||||||||||| || ||||| || ||| ||||||||| |||||| ||||||||||| ||||||||    
T  17228107 tttaacggaactgctttaagccacaaaaaatgatgaaactcttcagtgattttagtgtcaaccgctgttaaataagaatacgccgattgcac 17228198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 2894398 - 2894506
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    ||||||||| ||||| | ||| |||||| ||||   ||| |||| ||||||  |||| |||||| | || |||| ||||||||||||||| ||||| |||    
T  2894398 aatattaacttttaagggaaccgctttaagccatagaaattgatcaaaatctgcagtgatgttagtatccaccgctgttaagtaagaataagcagaatgc 2894497  T
Q  113 actgtgtat 121  Q
    || ||||||    
T  2894498 accgtgtat 2894506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 182429 - 182528
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||| |||| | || |||  |||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||    
T  182429 gctcaacaccaagagagaacaaacctgcgaccgaaatggatttgttctcagaaagatcaaacaacctaggaaaccgctcacaaaaagagaccgatcctaa 182528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 20208545 - 20208446
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||  |||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||| |||||    
T  20208545 gctcaacaccaagagagaacaatcctgccaccgtaatagatttgttctcagcaagatcaaacaacctaggaaaccgctcacacaaagaaaccgaccctaa 20208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 4415526 - 4415427
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| ||||||||| ||||||| ||||||  |||||||||||  |||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  4415526 gctcaacaccaagagagaacaagtctgccaccgtaatggatttgttctcaacaagatcgaacaacctaggaaaccgctcacacaaagaaaccgatcctaa 4415427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 6049535 - 6049624
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaa 348  Q
    |||| |||||||||||||||||| |||||| ||||||  |||| || |||||||||||||||||||||||||||| ||||| ||| ||||    
T  6049535 gctcgacaccaaaagagaacaaacctgccaccgtaatggatttattgtcagaaagatcaaacaacctaggaaacctctcacgaaacgaaa 6049624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 358
Target Start/End: Complemental strand, 7000546 - 7000492
Alignment:
Q  304 tctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| | |||||||    
T  7000546 tctcagaaagatcgaacaacctaggaaaccgctcacaaaaagaaaccaatcctaa 7000492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 26846181 - 26846280
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||  |||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||| |||||    
T  26846181 gctcaacaccaagagagaacaatcctgccaccgtaatagatttgttctcagcaagatcaaacaacctaggaaaccgctcacacaaagaaaccgaccctaa 26846280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 43563355 - 43563409
Alignment:
Q  355 ctaataattgaaaattcatggtgtgtggctgtgtgcaattgtattgtagcttcta 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43563355 ctaataattgaaaattcatggtgtgtggctgtgtgcaattgtattgtagcttcta 43563409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 47537582 - 47537681
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||| | ||||||  |||||  ||||||||||||||||||| |||||||||| ||||| |||||||||||||| |||||||||    
T  47537582 gctcaacaccaagagagaacagacctgccactgtaatggatttgttctcagaaagatcgaacaacctagtaaaccgctcacaaaaagaaaccgatcctaa 47537681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 48192113 - 48192212
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| ||||||||| | ||||| ||||||  ||||||||||||||| ||| |||||||||| ||||| | |||| ||||||  |||||||||    
T  48192113 gctcaacaccaagagagaacaagtttgccaccgtaatggatttgttctcagaaaaatcgaacaacctagaaaaccgcccacacaaagaagccgatcctaa 48192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 50544546 - 50544637
Alignment:
Q  267 ccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| |||||||||||  |||| ||||||  ||||||||||| ||||||||||||| | ||||| ||  ||||||||||||| |||||||||    
T  50544546 ccaagagagaacaaattggccaccgtaatggatttgttctcataaagatcaaacaatcgaggaatccggtcacaaaaagaaaccgatcctaa 50544637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 9819221 - 9819322
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaatacgcagattgc 112  Q
    |||||| || ||||| | ||| |||||| ||||  |||| |||| ||||||  |||| |||||| |||| |||| ||||||||||||||| ||||| |||    
T  9819221 aatattgacttttaagggaaccgctttaagccataaaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaataagcagaatgc 9819320  T
Q  113 ac 114  Q
    ||    
T  9819321 ac 9819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 7842 - 7941
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||| ||  |||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||| |||||    
T  7842 gctcaacaccaagagagaaaaatcctgccaccgtaatagatttgttctcagcaagatcaaacaacctaggaaaccgctcacacaaagaaaccgaccctaa 7941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 12776 - 12875
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||| ||  |||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||| |||||    
T  12776 gctcaacaccaagagagaaaaatcctgccaccgtaatagatttgttctcagcaagatcaaacaacctaggaaaccgctcacacaaagaaaccgaccctaa 12875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0912 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0912
Description:

Target: scaffold0912; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 346
Target Start/End: Complemental strand, 2699 - 2612
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaaga 346  Q
    |||| ||||||| |||||||||| ||||||  | |||  ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  2699 gctcaacaccaagagagaacaaacctgccactgaaatggatttgttctcagaaacatcaaacaacctaggaaaccgctcacaaaaaga 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 1380397 - 1380483
Alignment:
Q  260 ctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaaga 346  Q
    ||||||||||| ||| ||||||||||||| || ||  ||||||||| |||| ||||| |||||||||||||||| ||||||||||||    
T  1380397 ctctacaccaagagaaaacaaatctgccaccgaaaagaatttgttcacagagagatcgaacaacctaggaaaccgctcacaaaaaga 1380483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 30276050 - 30276139
Alignment:
Q  13 aatattaacctttaacgaaactgctttatgccacgaaaaatgatgaaaatcctcagtaatgttattgtcaaccgttgttaagtaagaata 102  Q
    ||||||||| ||||| | ||| |||||| ||||  |||| |||| ||||||  |||| |||||| |||| |||| |||||||||||||||    
T  30276050 aatattaacttttaagggaaccgctttaagccataaaaattgatcaaaatctgcagtgatgttagtgtccaccgctgttaagtaagaata 30276139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 23680515 - 23680575
Alignment:
Q  298 atttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    ||||||||||||||||||| |||||||||||||||| ||||| |||||||| |||||||||    
T  23680515 atttgttctcagaaagatcgaacaacctaggaaaccgctcacgaaaagaaaccgatcctaa 23680575  T

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Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 45255655 - 45255556
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||||||| |||||| || |||  |||| |||||||||||||||||||||||||| |||| ||||| ||| ||||  ||||||||    
T  45255655 gctcaacaccaagagagaacaaacctgccaccgaaatggatttattctcagaaagatcaaacaacctagggaacctctcacgaaacgaaactgatcctaa 45255556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 358
Target Start/End: Original strand, 17659145 - 17659244
Alignment:
Q  259 gctctacaccaaaagagaacaaatctgccatcgtaataaatttgttctcagaaagatcaaacaacctaggaaaccactcacaaaaagaaatcgatcctaa 358  Q
    |||| ||||||| |||||| | | ||||||  |||||  ||||||||||| |||||||| ||||||||||||||| |||||| ||||||| ||| |||||    
T  17659145 gctccacaccaagagagaatagacctgccactgtaatgtatttgttctcaaaaagatcatacaacctaggaaacctctcacagaaagaaaccgaacctaa 17659244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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