View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0671_low_16 (Length: 362)

Name: NF0671_low_16
Description: NF0671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0671_low_16
NF0671_low_16
[»] chr3 (79 HSPs)
chr3 (91-355)||(14319883-14320147)
chr3 (109-355)||(11214986-11215220)
chr3 (100-228)||(13073548-13073676)
chr3 (91-233)||(14256219-14256361)
chr3 (109-228)||(1792831-1792950)
chr3 (91-254)||(7802859-7803022)
chr3 (109-196)||(4406128-4406215)
chr3 (91-221)||(29470155-29470285)
chr3 (149-228)||(9389562-9389641)
chr3 (116-211)||(15225170-15225265)
chr3 (289-355)||(14256399-14256465)
chr3 (289-355)||(18844702-18844768)
chr3 (129-223)||(16669392-16669486)
chr3 (36-96)||(4406264-4406324)
chr3 (24-96)||(9389416-9389488)
chr3 (28-96)||(14319784-14319852)
chr3 (28-96)||(18008321-18008389)
chr3 (289-355)||(4406020-4406086)
chr3 (30-96)||(10635319-10635385)
chr3 (30-96)||(12184312-12184378)
chr3 (30-96)||(12247731-12247797)
chr3 (30-92)||(16669272-16669334)
chr3 (30-96)||(23759160-23759226)
chr3 (30-91)||(6499278-6499339)
chr3 (36-96)||(14583177-14583237)
chr3 (36-96)||(17963402-17963462)
chr3 (129-176)||(15835157-15835204)
chr3 (30-96)||(1055756-1055822)
chr3 (30-96)||(4745585-4745651)
chr3 (30-96)||(5512532-5512598)
chr3 (30-96)||(5545925-5545991)
chr3 (30-96)||(5626287-5626353)
chr3 (30-96)||(5874596-5874662)
chr3 (30-96)||(11214871-11214937)
chr3 (115-177)||(13381679-13381741)
chr3 (115-177)||(13392273-13392335)
chr3 (30-96)||(14256122-14256188)
chr3 (30-96)||(16428062-16428128)
chr3 (30-96)||(28323151-28323217)
chr3 (30-96)||(38196627-38196693)
chr3 (30-96)||(39373942-39374008)
chr3 (30-96)||(41685530-41685596)
chr3 (28-93)||(1792714-1792779)
chr3 (189-266)||(15192430-15192507)
chr3 (30-95)||(15225063-15225128)
chr3 (289-355)||(9389666-9389735)
chr3 (248-355)||(16669490-16669597)
chr3 (115-177)||(6219061-6219123)
chr3 (30-96)||(8776545-8776611)
chr3 (116-174)||(9004757-9004815)
chr3 (30-96)||(12295094-12295160)
chr3 (126-172)||(18008137-18008183)
chr3 (30-96)||(18485878-18485944)
chr3 (30-88)||(24392406-24392464)
chr3 (30-88)||(24661744-24661802)
chr3 (30-96)||(9992212-9992280)
chr3 (185-266)||(17908411-17908492)
chr3 (125-177)||(13123477-13123529)
chr3 (125-177)||(14467403-14467455)
chr3 (173-225)||(18008135-18008187)
chr3 (125-177)||(23759046-23759098)
chr3 (115-183)||(37868223-37868291)
chr3 (115-183)||(37876741-37876809)
chr3 (126-197)||(1055619-1055690)
chr3 (30-96)||(6218958-6219024)
chr3 (42-96)||(9004662-9004716)
chr3 (30-96)||(29470058-29470124)
chr3 (30-96)||(37876846-37876912)
chr3 (306-355)||(13123353-13123402)
chr3 (306-355)||(14467279-14467328)
chr3 (36-96)||(16389810-16389870)
chr3 (40-96)||(13381586-13381642)
chr3 (40-96)||(13392180-13392236)
chr3 (40-96)||(15192315-15192371)
chr3 (126-174)||(15225231-15225279)
chr3 (185-229)||(16656940-16656984)
chr3 (126-174)||(16669440-16669488)
chr3 (125-177)||(19780173-19780225)
chr3 (40-96)||(37868328-37868384)
[»] chr2 (31 HSPs)
chr2 (91-355)||(26868753-26869014)
chr2 (109-355)||(28378106-28378348)
chr2 (149-355)||(24423821-24424021)
chr2 (125-248)||(21170792-21170915)
chr2 (109-355)||(20415973-20416192)
chr2 (138-266)||(28730242-28730370)
chr2 (28-96)||(26869045-26869113)
chr2 (28-96)||(28377989-28378057)
chr2 (30-96)||(9771669-9771735)
chr2 (30-96)||(9906492-9906558)
chr2 (30-96)||(22765634-22765700)
chr2 (30-96)||(24423682-24423748)
chr2 (28-96)||(20415856-20415924)
chr2 (30-96)||(10268808-10268874)
chr2 (30-96)||(11403783-11403849)
chr2 (30-96)||(21170664-21170730)
chr2 (30-96)||(27223243-27223309)
chr2 (30-96)||(28730116-28730182)
chr2 (30-88)||(35254828-35254886)
chr2 (30-88)||(35265437-35265495)
chr2 (30-96)||(43347219-43347285)
chr2 (125-177)||(29245952-29246004)
chr2 (40-96)||(34799155-34799211)
chr2 (40-96)||(40224132-40224188)
chr2 (313-355)||(21170962-21171004)
chr2 (30-96)||(29246057-29246123)
chr2 (30-96)||(43084520-43084586)
chr2 (125-177)||(4211651-4211703)
chr2 (125-177)||(9771782-9771834)
chr2 (125-177)||(22958754-22958806)
chr2 (125-177)||(24336803-24336855)
[»] chr6 (42 HSPs)
chr6 (91-355)||(13914795-13915059)
chr6 (91-355)||(18924335-18924587)
chr6 (126-227)||(22287726-22287827)
chr6 (149-266)||(20058908-20059025)
chr6 (28-96)||(17044578-17044646)
chr6 (28-96)||(18924236-18924304)
chr6 (28-96)||(25795738-25795806)
chr6 (30-96)||(9121385-9121451)
chr6 (30-96)||(18833175-18833241)
chr6 (30-96)||(22287893-22287959)
chr6 (30-96)||(25684862-25684928)
chr6 (30-96)||(25733678-25733744)
chr6 (30-96)||(26866618-26866684)
chr6 (30-96)||(27374630-27374696)
chr6 (30-96)||(27464987-27465053)
chr6 (33-96)||(13915090-13915154)
chr6 (30-96)||(4632736-4632802)
chr6 (30-96)||(12725767-12725833)
chr6 (30-96)||(16932217-16932283)
chr6 (30-96)||(25789536-25789602)
chr6 (30-96)||(27343553-27343619)
chr6 (30-96)||(27404293-27404359)
chr6 (30-96)||(32309975-32310041)
chr6 (31-96)||(27386265-27386330)
chr6 (31-96)||(27476678-27476743)
chr6 (124-172)||(19460343-19460391)
chr6 (30-88)||(26027235-26027293)
chr6 (125-174)||(25733794-25733843)
chr6 (40-96)||(12856754-12856810)
chr6 (100-176)||(27386164-27386240)
chr6 (100-176)||(27476577-27476653)
chr6 (125-177)||(34816206-34816258)
chr6 (289-343)||(25795560-25795617)
chr6 (30-96)||(3663227-3663293)
chr6 (30-96)||(12359974-12360040)
chr6 (126-172)||(18833292-18833338)
chr6 (129-174)||(22287713-22287758)
chr6 (178-211)||(25685010-25685043)
chr6 (109-178)||(27374524-27374593)
chr6 (109-178)||(27464881-27464950)
chr6 (114-178)||(9121508-9121572)
chr6 (91-147)||(20048878-20048934)
[»] scaffold0411 (4 HSPs)
scaffold0411 (109-355)||(1375-1621)
scaffold0411 (109-355)||(5406-5652)
scaffold0411 (40-96)||(1270-1326)
scaffold0411 (40-96)||(5301-5357)
[»] chr4 (39 HSPs)
chr4 (134-355)||(15205711-15205929)
chr4 (116-211)||(11537770-11537865)
chr4 (109-355)||(16306875-16307109)
chr4 (125-228)||(3374674-3374777)
chr4 (109-196)||(19572842-19572929)
chr4 (28-96)||(15205554-15205622)
chr4 (116-223)||(10292432-10292539)
chr4 (289-355)||(19572743-19572809)
chr4 (30-96)||(10292580-10292646)
chr4 (116-197)||(39519135-39519216)
chr4 (21-93)||(11537909-11537981)
chr4 (28-95)||(19572979-19573046)
chr4 (30-96)||(4996730-4996796)
chr4 (30-96)||(21998297-21998363)
chr4 (30-96)||(30935399-30935465)
chr4 (31-96)||(452442-452507)
chr4 (124-176)||(14776690-14776742)
chr4 (149-249)||(40469007-40469107)
chr4 (289-355)||(3374586-3374652)
chr4 (30-96)||(24642193-24642259)
chr4 (30-96)||(27658484-27658550)
chr4 (30-96)||(36020171-36020237)
chr4 (30-96)||(39519028-39519094)
chr4 (30-96)||(55754148-55754214)
chr4 (31-96)||(11517083-11517148)
chr4 (30-88)||(10749506-10749564)
chr4 (30-88)||(10963275-10963333)
chr4 (30-96)||(18761413-18761479)
chr4 (115-177)||(30935502-30935564)
chr4 (134-174)||(11516969-11517009)
chr4 (125-177)||(16257679-16257731)
chr4 (125-177)||(17919884-17919936)
chr4 (125-177)||(19953385-19953437)
chr4 (30-96)||(16307158-16307224)
chr4 (115-177)||(21998198-21998260)
chr4 (115-177)||(24026461-24026523)
chr4 (40-93)||(3374839-3374892)
chr4 (306-355)||(24026583-24026632)
chr4 (126-174)||(11537756-11537804)
[»] scaffold0016 (2 HSPs)
scaffold0016 (109-355)||(193670-193904)
scaffold0016 (28-96)||(193953-194021)
[»] scaffold0201 (2 HSPs)
scaffold0201 (109-355)||(111-339)
scaffold0201 (28-96)||(388-456)
[»] chr8 (34 HSPs)
chr8 (91-233)||(18155562-18155704)
chr8 (149-260)||(23467802-23467913)
chr8 (91-251)||(19226678-19226838)
chr8 (136-221)||(30323673-30323758)
chr8 (289-355)||(18155476-18155542)
chr8 (28-96)||(18155735-18155803)
chr8 (124-176)||(3834655-3834707)
chr8 (124-176)||(17517483-17517535)
chr8 (30-96)||(208519-208585)
chr8 (30-96)||(722142-722208)
chr8 (30-96)||(13686927-13686993)
chr8 (30-96)||(29078580-29078646)
chr8 (30-96)||(32086626-32086692)
chr8 (30-96)||(44482972-44483038)
chr8 (125-177)||(19130488-19130540)
chr8 (30-96)||(243670-243736)
chr8 (30-96)||(797040-797106)
chr8 (30-88)||(3357574-3357632)
chr8 (30-88)||(9342967-9343025)
chr8 (30-96)||(19226869-19226935)
chr8 (30-96)||(19420287-19420353)
chr8 (30-96)||(36079795-36079861)
chr8 (30-96)||(36294793-36294859)
chr8 (125-177)||(6152859-6152911)
chr8 (40-96)||(15765484-15765540)
chr8 (125-177)||(15765602-15765654)
chr8 (40-96)||(15789621-15789677)
chr8 (125-177)||(15789739-15789791)
chr8 (125-172)||(23785264-23785311)
chr8 (30-96)||(19130593-19130659)
chr8 (180-266)||(19420135-19420221)
chr8 (115-177)||(26113057-26113119)
chr8 (126-175)||(23372442-23372491)
chr8 (40-96)||(26113156-26113212)
[»] chr5 (55 HSPs)
chr5 (91-228)||(17448408-17448545)
chr5 (91-228)||(34060997-34061134)
chr5 (149-266)||(23404900-23405017)
chr5 (152-249)||(19476401-19476498)
chr5 (289-355)||(34061159-34061225)
chr5 (136-221)||(1112988-1113073)
chr5 (149-249)||(20789158-20789258)
chr5 (289-343)||(17448329-17448383)
chr5 (30-96)||(31446896-31446962)
chr5 (30-96)||(31842425-31842491)
chr5 (36-96)||(17448576-17448636)
chr5 (28-96)||(34060898-34060966)
chr5 (30-96)||(15995064-15995130)
chr5 (124-177)||(23480014-23480067)
chr5 (30-96)||(9344982-9345048)
chr5 (30-96)||(14448792-14448858)
chr5 (30-96)||(14559824-14559890)
chr5 (30-96)||(15767794-15767860)
chr5 (30-96)||(17616091-17616157)
chr5 (30-96)||(17727948-17728014)
chr5 (30-96)||(23305306-23305372)
chr5 (30-96)||(23370963-23371029)
chr5 (30-96)||(23705804-23705870)
chr5 (30-96)||(24589838-24589904)
chr5 (30-96)||(24818643-24818709)
chr5 (30-96)||(27043993-27044059)
chr5 (30-96)||(30229212-30229278)
chr5 (30-96)||(31357565-31357631)
chr5 (30-96)||(36584283-36584349)
chr5 (30-96)||(37731730-37731796)
chr5 (30-96)||(42051804-42051870)
chr5 (31-96)||(21416141-21416206)
chr5 (31-96)||(21416238-21416303)
chr5 (125-177)||(39360794-39360846)
chr5 (30-88)||(6984785-6984843)
chr5 (30-96)||(19476298-19476363)
chr5 (289-339)||(19476508-19476558)
chr5 (30-88)||(22684475-22684533)
chr5 (30-96)||(23404760-23404826)
chr5 (30-88)||(27469033-27469091)
chr5 (30-96)||(35224513-35224579)
chr5 (30-96)||(36696736-36696802)
chr5 (30-88)||(39492661-39492719)
chr5 (31-88)||(14039070-14039127)
chr5 (115-175)||(15994967-15995027)
chr5 (125-177)||(22155625-22155677)
chr5 (30-96)||(5292318-5292384)
chr5 (30-96)||(20560679-20560745)
chr5 (30-96)||(27605188-27605254)
chr5 (109-211)||(31446999-31447101)
chr5 (115-177)||(31842528-31842590)
chr5 (129-183)||(39360813-39360867)
chr5 (185-266)||(20560816-20560897)
chr5 (115-175)||(5292221-5292281)
chr5 (125-177)||(40399519-40399571)
[»] chr1 (31 HSPs)
chr1 (109-266)||(7680955-7681112)
chr1 (91-266)||(26562169-26562344)
chr1 (149-221)||(152696-152768)
chr1 (30-96)||(12732336-12732402)
chr1 (30-96)||(12742929-12742995)
chr1 (124-175)||(22644573-22644624)
chr1 (30-96)||(3173404-3173470)
chr1 (30-96)||(13424908-13424974)
chr1 (30-96)||(35399472-35399538)
chr1 (30-96)||(35646997-35647063)
chr1 (30-96)||(38096885-38096951)
chr1 (30-96)||(5835029-5835095)
chr1 (30-88)||(7509089-7509147)
chr1 (30-96)||(23158162-23158228)
chr1 (30-96)||(26562375-26562441)
chr1 (30-88)||(36245381-36245439)
chr1 (30-88)||(51654825-51654883)
chr1 (30-91)||(47616866-47616927)
chr1 (125-177)||(13425036-13425088)
chr1 (127-174)||(21206444-21206491)
chr1 (127-174)||(21214488-21214535)
chr1 (115-177)||(12732237-12732299)
chr1 (115-177)||(12742830-12742892)
chr1 (30-96)||(19180749-19180815)
chr1 (306-355)||(12622334-12622383)
chr1 (306-355)||(21865290-21865339)
chr1 (178-227)||(21865415-21865464)
chr1 (40-96)||(4169110-4169166)
chr1 (125-177)||(12622207-12622259)
chr1 (125-177)||(19180644-19180696)
chr1 (129-177)||(21865399-21865447)
[»] scaffold0398 (4 HSPs)
scaffold0398 (116-266)||(2714-2864)
scaffold0398 (116-266)||(10969-11119)
scaffold0398 (30-96)||(2598-2664)
scaffold0398 (30-96)||(10853-10919)
[»] scaffold0251 (1 HSPs)
scaffold0251 (100-250)||(24304-24454)
[»] scaffold0474 (1 HSPs)
scaffold0474 (149-254)||(93-198)
[»] scaffold0272 (4 HSPs)
scaffold0272 (28-96)||(21188-21256)
scaffold0272 (281-353)||(11764-11836)
scaffold0272 (129-196)||(11651-11718)
scaffold0272 (97-145)||(11634-11682)
[»] scaffold2119 (2 HSPs)
scaffold2119 (109-233)||(706-830)
scaffold2119 (30-96)||(612-678)
[»] scaffold0195 (3 HSPs)
scaffold0195 (116-196)||(31658-31738)
scaffold0195 (30-96)||(31779-31845)
scaffold0195 (256-355)||(31535-31634)
[»] chr7 (41 HSPs)
chr7 (109-180)||(25213790-25213861)
chr7 (30-96)||(2714608-2714674)
chr7 (180-266)||(9161482-9161568)
chr7 (30-96)||(465979-466045)
chr7 (30-96)||(1989405-1989471)
chr7 (30-96)||(8011067-8011133)
chr7 (30-96)||(9087076-9087142)
chr7 (30-96)||(11007024-11007090)
chr7 (241-355)||(25213871-25213985)
chr7 (30-96)||(26399082-26399148)
chr7 (30-96)||(40051090-40051156)
chr7 (30-91)||(15886605-15886666)
chr7 (124-176)||(15218150-15218202)
chr7 (109-177)||(21001467-21001535)
chr7 (114-177)||(9434986-9435049)
chr7 (115-177)||(6876323-6876385)
chr7 (30-96)||(11097861-11097927)
chr7 (30-96)||(18421113-18421179)
chr7 (30-88)||(24736580-24736638)
chr7 (30-96)||(42867698-42867764)
chr7 (125-177)||(168657-168709)
chr7 (125-177)||(2714736-2714788)
chr7 (125-177)||(5687282-5687334)
chr7 (28-96)||(9435106-9435174)
chr7 (149-193)||(15886745-15886789)
chr7 (177-249)||(18420990-18421062)
chr7 (28-96)||(21001362-21001430)
chr7 (129-172)||(14125095-14125138)
chr7 (129-172)||(14428491-14428534)
chr7 (115-177)||(466082-466144)
chr7 (30-96)||(5687387-5687453)
chr7 (125-183)||(9161514-9161572)
chr7 (30-96)||(10560080-10560146)
chr7 (116-174)||(18421014-18421072)
chr7 (28-82)||(25209997-25210051)
chr7 (306-355)||(6876448-6876497)
chr7 (306-355)||(17959280-17959329)
chr7 (125-177)||(4213786-4213838)
chr7 (306-346)||(8619058-8619098)
chr7 (40-96)||(9161634-9161690)
chr7 (129-177)||(22090947-22090995)
[»] scaffold1216 (2 HSPs)
scaffold1216 (109-249)||(811-951)
scaffold1216 (30-96)||(991-1057)
[»] scaffold0017 (2 HSPs)
scaffold0017 (149-197)||(177293-177341)
scaffold0017 (30-93)||(177403-177466)
[»] scaffold0747 (2 HSPs)
scaffold0747 (30-96)||(4208-4274)
scaffold0747 (125-177)||(4082-4134)
[»] scaffold0906 (1 HSPs)
scaffold0906 (31-96)||(2860-2925)
[»] scaffold0739 (1 HSPs)
scaffold0739 (124-176)||(3899-3951)
[»] scaffold0010 (1 HSPs)
scaffold0010 (124-172)||(106907-106955)
[»] scaffold0005 (1 HSPs)
scaffold0005 (124-176)||(62988-63040)
[»] scaffold0454 (1 HSPs)
scaffold0454 (30-96)||(3144-3210)
[»] scaffold0133 (2 HSPs)
scaffold0133 (30-96)||(32985-33051)
scaffold0133 (180-266)||(41311-41397)
[»] scaffold0105 (1 HSPs)
scaffold0105 (30-96)||(45911-45977)
[»] scaffold0047 (2 HSPs)
scaffold0047 (30-96)||(45703-45769)
scaffold0047 (115-177)||(45806-45868)
[»] scaffold0014 (4 HSPs)
scaffold0014 (30-96)||(212536-212602)
scaffold0014 (30-96)||(218405-218471)
scaffold0014 (149-197)||(212414-212462)
scaffold0014 (149-197)||(218283-218331)
[»] scaffold0382 (1 HSPs)
scaffold0382 (124-176)||(9355-9407)
[»] scaffold0063 (1 HSPs)
scaffold0063 (124-176)||(16714-16766)
[»] scaffold0012 (2 HSPs)
scaffold0012 (124-176)||(21853-21905)
scaffold0012 (21-96)||(129615-129690)
[»] scaffold0185 (1 HSPs)
scaffold0185 (125-172)||(10961-11008)
[»] scaffold0497 (5 HSPs)
scaffold0497 (30-96)||(2163-2229)
scaffold0497 (173-223)||(2291-2341)
scaffold0497 (30-96)||(8467-8533)
scaffold0497 (116-174)||(8589-8647)
scaffold0497 (126-174)||(2295-2343)
[»] scaffold0194 (1 HSPs)
scaffold0194 (30-96)||(2494-2560)
[»] scaffold0085 (1 HSPs)
scaffold0085 (30-96)||(55780-55846)
[»] scaffold0015 (1 HSPs)
scaffold0015 (124-165)||(164375-164416)
[»] scaffold0410 (1 HSPs)
scaffold0410 (124-176)||(8372-8424)
[»] scaffold0247 (1 HSPs)
scaffold0247 (125-161)||(5142-5178)
[»] scaffold0207 (1 HSPs)
scaffold0207 (136-176)||(22314-22354)
[»] scaffold0485 (2 HSPs)
scaffold0485 (30-96)||(366-432)
scaffold0485 (185-266)||(503-584)
[»] scaffold0199 (1 HSPs)
scaffold0199 (30-75)||(20254-20299)
[»] scaffold0022 (1 HSPs)
scaffold0022 (138-211)||(51990-52063)
[»] scaffold0670 (1 HSPs)
scaffold0670 (124-176)||(2558-2610)


Alignment Details
Target: chr3 (Bit Score: 133; Significance: 4e-69; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 91 - 355
Target Start/End: Original strand, 14319883 - 14320147
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    ||||| |||||||| |  ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14319883 aaacaaacccccaaactgaaactcaaaccgtccttgagcaaattgttcctaaacttattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 14319982  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaa 290  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||| ||||   ||| || |||||| | ||| | |||||||||| ||||||| ||    
T  14319983 tgaaaaacctgtttctgaacacattgtttctgaccaacaacaaactacctctgacttaccgcaacctaacactgaacaacaaacagaaaaccttaaccaa 14320082  T
Q  291 tcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||| |||   |||| ||||  |||||||||||| || || ||||||||||| |||||||||||    
T  14320083 tcacctactcaaaatcaaactattcctgaacaacacactgcctctgaccaaccttcttcatctca 14320147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 109 - 355
Target Start/End: Original strand, 11214986 - 11215220
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||| |||  |||||||||||||||||||||| ||||| |||||||| ||||||||||| | | ||||||||||||||||||| ||||| |||    
T  11214986 aaactcaaaccatcccagagcaaattgttcctgaacatactgttcttgaacaaggtgcttctgacctatagcaaagtgttcctgaacaacatgttcatga 11215085  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatcta 308  Q
    |||||||| |||||   | ||||||||||||||||||||||||||||||||| |||||     ||||  ||||       |||||||||| |||||||||    
T  11215086 acacattgcttctg---accaacaaactaccactgaacaaccccagcctaacacagaa----caacaacaacc-----agaatcaccaaccatcaatcta 11215173  T
Q  309 acttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
     |||||||||||||||||||||||||||||||||| ||| |||||||    
T  11215174 gcttctcctgaacaacaaacagcttctgaccaaccttctacatctca 11215220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 13073676 - 13073548
Alignment:
Q  100 cccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacc 199  Q
    |||||| | ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  13073676 cccaacaagaaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaagtgttcctgaacaaac 13073577  T
Q  200 tgttcctgaacacattgtttctgaacaac 228  Q
    |||||||||||||||||||||||| ||||    
T  13073576 tgttcctgaacacattgtttctgaccaac 13073548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 91 - 233
Target Start/End: Original strand, 14256219 - 14256361
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    ||||| || |||||| | ||||||||||||||| |||||||||||||||||||| || |||||||||||||||| ||||||||||||| |||||||||||    
T  14256219 aaacaaacacccaacaagaaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttacttctgaccaagagcaaagtgttcc 14256318  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaacaacaa 233  Q
    ||||||| ||||||||||||||||||||||||| |||| ||||    
T  14256319 tgaacaaactgttcctgaacacattgtttctgaccaaccacaa 14256361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 109 - 228
Target Start/End: Original strand, 1792831 - 1792950
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  1792831 aaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaagtgttcctgaacaaactgtttctga 1792930  T
Q  209 acacattgtttctgaacaac 228  Q
    ||||||| ||||||| ||||    
T  1792931 acacattatttctgaccaac 1792950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 91 - 254
Target Start/End: Original strand, 7802859 - 7803022
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    |||||||  ||||| || ||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  7802859 aaacagaaacccaaacagaaactcaaaccatccctgagcaaactgttcctgaacatactgttcctgaacaagttgcttctgacctagaacaaactgttcc 7802958  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccag 254  Q
    ||||| | ||||||||||||| | | |||||||   | | ||||||||||  ||||||||||||    
T  7802959 tgaaccaactgttcctgaacagactatttctgacttagatcaaactaccatagaacaaccccag 7803022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 4406215 - 4406128
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaaca 196  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  4406215 aaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaagtgttcctgaaca 4406128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 29470155 - 29470285
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    |||||||  ||||| || ||||||||||| | | |||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||    
T  29470155 aaacagaaacccaaacagaaactcaaaccattcctgagcaaactgttcctgaacaaactgttcctgaacaagtcgcttctgaccaagaacaaactgttcc 29470254  T
Q  191 tgaacaacctgttcctgaacacattgtttct 221  Q
    ||||| | |||||||||||||  ||||||||    
T  29470255 tgaaccaactgttcctgaacaggttgtttct 29470285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 9389562 - 9389641
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaac 228  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||| |||| |||||||||||    
T  9389562 tgttcctgaacaagttgcttctgaccaagagcaaagtgttcctgaacaaactattcctgaacatattgcttctgaacaac 9389641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 15225170 - 15225265
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaaca 211  Q
    |||| ||| |||||||| |||||||||||| | ||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||||||||||    
T  15225170 aaccttccctgagcaaagtgttcctgaacaaactgttcctgaactagttgcttctgaccaagagcaaaatgttcctgaacaaactgttcctgaaca 15225265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 14256399 - 14256465
Alignment:
Q  289 aatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14256399 aatcaccaaccatcaatctaacttctcctgaacaacaaacagcttctgaccaaccttcttcatctca 14256465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 18844702 - 18844768
Alignment:
Q  289 aatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  18844702 aatcaccaaccatcaatctaacttctcctgaacaacaaacagcttctgaccaaccttctacatctca 18844768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 16669392 - 16669486
Alignment:
Q  129 caaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctga 223  Q
    |||| |||||||||||  | |||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||||||||||||| |||| ||||||    
T  16669392 caaagtgttcctgaacgaaatgttcctgaacaagttgcttctgacctagagcaaaatgttcatgaacaaactgttcctgaacaaattgcttctga 16669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 4406324 - 4406264
Alignment:
Q  36 aacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||||| |||| ||||||||| | ||||||||||||||||||||    
T  4406324 aacctagaaaaacatctaggaggagaaatgcaaccaacccccacaaaggcctctaaaacag 4406264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 9389416 - 9389488
Alignment:
Q  24 tcatcacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||| ||||||||||||||||||||||| |||| ||||||||| |  |||||||||||||||||||    
T  9389416 tcatctcttcacaacctagaaaaacatctaggaggagaaatgcaaccaaccccaacaaaggcctctaaaacag 9389488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 14319784 - 14319852
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| || |||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||    
T  14319784 cacttcacaatctagaaaaacatctaggaggtgaaattcaaccaacccccacaaaggcctctaaaacag 14319852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 18008389 - 18008321
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||| | |||||| |||||||||||||    
T  18008389 cacttcacaacctagaaaaacatctaggaggtgaaatgtaaccaacccccacaaaagcctctaaaacag 18008321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 4406086 - 4406020
Alignment:
Q  289 aatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  4406086 aatcatcaaccatcaatctaacttctcctgaacatcaaacaacttctgaccaaccttctacatctca 4406020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 10635319 - 10635385
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||||||||||||| |||||||  |||||||||| ||||||||||||||| ||||    
T  10635319 cttcacaacctagaaaaacatctaggtggtgaaagacaaccaacacccacaaaggcctctaagacag 10635385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 12184378 - 12184312
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  12184378 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 12184312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 12247731 - 12247797
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||    
T  12247731 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctagaacag 12247797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 16669272 - 16669334
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaa 92  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||    
T  16669272 cttcacaacctagaaaaacatttaggaggtgaaatgcaaccaacccccacaaaggcctctaaa 16669334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 23759226 - 23759160
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  23759226 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 23759160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 6499278 - 6499339
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaa 91  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  6499278 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaa 6499339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 14583237 - 14583177
Alignment:
Q  36 aacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||| |||||||||||  ||||||||| | ||||||||||||||||||||    
T  14583237 aacctagaaaaacatttaggaggtgaattgcaaccaacccccacaaaggcctctaaaacag 14583177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 17963462 - 17963402
Alignment:
Q  36 aacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||||||||||||||||||||||||||| | ||||||| | |||||| |||||||||||||    
T  17963462 aacctagaaaaacatctaggaggtgaaatgtaaccaacccccacaaaagcctctaaaacag 17963402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 15835204 - 15835157
Alignment:
Q  129 caaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||    
T  15835204 caaaatgttcctgaacatgttgttcctgaacaagttgcttctgaccaa 15835157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 1055822 - 1055756
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||  |||||||||| | || ||||||||  |||||||||||||||||||    
T  1055822 cttcataacctagaaaaacacttaggaggtgagatgcgaccaacacctacaaaggcctctaaaacag 1055756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 4745651 - 4745585
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  4745651 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 4745585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 5512598 - 5512532
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  5512598 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 5512532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 5545925 - 5545991
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  5545925 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 5545991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 5626287 - 5626353
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  5626287 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 5626353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 5874596 - 5874662
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  5874596 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 5874662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 11214871 - 11214937
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| |||||||||||  |||||||||| ||||||||    
T  11214871 cttcacaacgtagaaaaacatctaggtggtgaaatgcaaccaacacctacaaaggcctttaaaacag 11214937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 13381679 - 13381741
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| |||||||||||| | |||||||||||||||||||||||| ||||    
T  13381679 aaaccatccctgagcaaactgttcctgaacaaactgttcctgaacaagttgcttctgaacaag 13381741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 13392273 - 13392335
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| |||||||||||| | |||||||||||||||||||||||| ||||    
T  13392273 aaaccatccctgagcaaactgttcctgaacaaactgttcctgaacaagttgcttctgaacaag 13392335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 14256122 - 14256188
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||||||||||||| |||||||  ||| ||||||||| | ||||||||||||||||||||    
T  14256122 cttcacaacctagaaaaacatttaggaggaaaaatgcaaccaactcccacaaaggcctctaaaacag 14256188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 16428062 - 16428128
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  16428062 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 16428128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 28323151 - 28323217
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  28323151 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 28323217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 38196693 - 38196627
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  38196693 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 38196627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 39374008 - 39373942
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  39374008 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 39373942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 41685596 - 41685530
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  41685596 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 41685530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 1792714 - 1792779
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaa 93  Q
    ||||||| ||||||||||||||  ||||||| |||| ||||||||| | |||||||||||||||||    
T  1792714 cacttcacaacctagaaaaacacttaggaggagaaatgcaaccaacccccacaaaggcctctaaaa 1792779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 15192430 - 15192507
Alignment:
Q  189 cctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    ||||| ||| |||||||||||||  |||||||||| | | ||||||||||||| ||||||||||| |||||| |||||    
T  15192430 cctgagcaaactgttcctgaacaggttgtttctgacctagaacaaactaccacagaacaaccccatcctaacacagaa 15192507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 15225063 - 15225128
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaaca 95  Q
    ||||||||||||||||||||  |||||||||| | ||||||||| |  ||||||||||||||||||    
T  15225063 cttcataacctagaaaaacacttaggaggtgagatgcaaccaacccctacaaaggcctctaaaaca 15225128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 9389666 - 9389735
Alignment:
Q  289 aatcaccaactatcaatctaacttc---tcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||| ||||||||||||||   |||||||| ||||||| ||||||||||||| ||| |||||||    
T  9389666 aatcaccaaccatcaatctaacttcttctcctgaaccacaaacaacttctgaccaaccttctacatctca 9389735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 16669490 - 16669597
Alignment:
Q  248 accccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctct 347  Q
    |||||| |||||| ||||| | ||||||||||  |||||| | |||||||||   |||| ||||  |||||| ||||| || |||||||||||||| |||    
T  16669490 accccaacctaacacagaacaacaaacagaaaatcttaaccattcaccaactcagaatcaaactattcctgagcaacacactgcttctgaccaaccttct 16669589  T
Q  348 tcatctca 355  Q
    ||||||||    
T  16669590 tcatctca 16669597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 6219061 - 6219123
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  6219061 aaaccatccctgagcaaactgttcctgaacaaactgttcctgaacaagctgcttctgaacaag 6219123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 8776611 - 8776545
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| || |||||||| ||||    
T  8776611 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaagcctctaagacag 8776545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 9004757 - 9004815
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    |||||||| |||||||| |||||||||||||| |||||||||| ||||||  |||||||    
T  9004757 aaccgtccctgagcaaagtgttcctgaacatactgttcctgaaaaagttgtctctgacc 9004815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 12295094 - 12295160
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| | ||||| ||||||||||| ||| ||||||||||| ||||    
T  12295094 cttcacaacttagaaaaacatctaggtgatgaaatgcaaccaacacccactaaggcctctaagacag 12295160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 18008183 - 18008137
Alignment:
Q  126 gagcaaattgttcctgaacatattgttcctgaacaagttgcttctga 172  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||    
T  18008183 gagcaaattgttcctgaacaacctgttcctgaacaagttgcttctga 18008137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 18485944 - 18485878
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| || |||||||| ||||    
T  18485944 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaagcctctaagacag 18485878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 24392406 - 24392464
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  24392406 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 24392464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 24661802 - 24661744
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  24661802 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 24661744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 9992212 - 9992280
Alignment:
Q  30 cttcataacctagaaaaacatctaggag--gtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| |  |||||| ||||||||||| ||||||||||||||| ||||    
T  9992212 cttcacaacttagaaaaacatctaggtgtggtgaaatgcaaccaacacccacaaaggcctctaagacag 9992280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 17908411 - 17908492
Alignment:
Q  185 tgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    ||||||||||| | ||||||||||||| | ||||||||| | | | ||||||||||  |||||||||||| ||||| |||||    
T  17908411 tgttcctgaaccaactgttcctgaacagactgtttctgatctagatcaaactaccatagaacaaccccagactaacacagaa 17908492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 13123529 - 13123477
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  13123529 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 13123477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 14467455 - 14467403
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  14467455 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 14467403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 18008187 - 18008135
Alignment:
Q  173 ccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaac 225  Q
    |||||| |||| |||||||||||||||||||||||||||  ||| ||||||||    
T  18008187 ccaagagcaaattgttcctgaacaacctgttcctgaacaagttgcttctgaac 18008135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 23759098 - 23759046
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  23759098 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 23759046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 37868291 - 37868223
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaa 183  Q
    ||||| ||| |||||||| ||||||||||||   || | ||||||||||||||||||||||| ||||||    
T  37868291 aaaccatccctgagcaaactgttcctgaacaagctgcttctgaacaagttgcttctgaccaacaacaaa 37868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 37876809 - 37876741
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaa 183  Q
    ||||| ||| |||||||| ||||||||||||   || | ||||||||||||||||||||||| ||||||    
T  37876809 aaaccatccctgagcaaactgttcctgaacaagctgcttctgaacaagttgcttctgaccaacaacaaa 37876741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 1055690 - 1055619
Alignment:
Q  126 gagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaa 197  Q
    ||||||| |||||||||| |   ||||||| ||||||||| ||||||||||||  ||| |||||||||||||    
T  1055690 gagcaaagtgttcctgaataagctgttcctaaacaagttgtttctgaccaagagtaaaatgttcctgaacaa 1055619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 6218958 - 6219024
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||  ||||||||||  |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  6218958 cttcataatttagaaaaacacttaggtggtgaaatgcaacctacacccacaaaggcctctaagacag 6219024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 9004662 - 9004716
Alignment:
Q  42 gaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||| |||||||||   ||||||||||||||||||||    
T  9004662 gaaaagcatttaggaggtgaaatgcaaccaacctccacaaaggcctctaaaacag 9004716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 29470058 - 29470124
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||| |||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  29470058 cttcacaacctagaaagacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 29470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 37876912 - 37876846
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  37876912 cttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 37876846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 13123402 - 13123353
Alignment:
Q  306 ctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||| |||| ||||||||||| ||||||||||||||  |||||||    
T  13123402 ctaacttcttctgaccaacaaacagcctctgaccaaccctccacatctca 13123353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 14467328 - 14467279
Alignment:
Q  306 ctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||| |||| ||||||||||| ||||||||||||||  |||||||    
T  14467328 ctaacttcttctgaccaacaaacagcctctgaccaaccctccacatctca 14467279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 16389810 - 16389870
Alignment:
Q  36 aacctagaaaaacatctaggaggtgaaacgcaaccaaca-ctcacaaaggcctctaaaacag 96  Q
    |||||||||||||||||||| ||||||| |||||| ||| |||| |||||||||||| ||||    
T  16389810 aacctagaaaaacatctaggtggtgaaatgcaacctacacctca-aaaggcctctaagacag 16389870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 13381586 - 13381642
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||  |||| ||||||| |||||||||||  |||||||||||||| ||||    
T  13381586 tagaaaaacacttaggtggtgaaatgcaaccaacaccaacaaaggcctctaagacag 13381642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 13392180 - 13392236
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||  |||| ||||||| |||||||||||  |||||||||||||| ||||    
T  13392180 tagaaaaacacttaggtggtgaaatgcaaccaacaccaacaaaggcctctaagacag 13392236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 15192315 - 15192371
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  15192315 tagaaaagcatttaggcggtgaaatgcaacctacacccacaaaggcctctaagacag 15192371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 15225231 - 15225279
Alignment:
Q  126 gagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    ||||||| |||||||||||| | |||||||||||| ||||| |||||||    
T  15225231 gagcaaaatgttcctgaacaaactgttcctgaacaggttgcctctgacc 15225279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 16656940 - 16656984
Alignment:
Q  185 tgttcctgaacaacctgttcctgaacacattgtttctgaacaaca 229  Q
    ||||||||||||| |||||| |||||| |||||| ||||||||||    
T  16656940 tgttcctgaacaaactgttcatgaacaaattgttcctgaacaaca 16656984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 16669440 - 16669488
Alignment:
Q  126 gagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    ||||||| ||||| |||||| | ||||||||||||| ||||||||||||    
T  16669440 gagcaaaatgttcatgaacaaactgttcctgaacaaattgcttctgacc 16669488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 19780225 - 19780173
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  19780225 tgagcaaactgttcctgagcaaactgttcctgaacaagctgcttctgaacaag 19780173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 37868384 - 37868328
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  37868384 tagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 37868328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 7e-68; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 91 - 355
Target Start/End: Complemental strand, 26869014 - 26868753
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    ||||| |||||||| |  ||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||||    
T  26869014 aaacaaacccccaaactgaaactcaaaccatcccagagcaaattgttcctgaacatactgttcctgaacaaggtgcttctaacctagaacaaagtgttcc 26868915  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaa 290  Q
    |||||||| ||||||||||||||||| |||||| ||||||   | | || |||| | |||||| |||| ||||||| | |||||||||||||||||| ||    
T  26868914 tgaacaacatgttcctgaacacattgcttctgaccaacaa---attgcctctgacctaccccaacctatcccagaacaacaaacagaaacccttaaccaa 26868818  T
Q  291 tcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||| ||||| |||||| ||||||||||| ||||||||||||||||| ||| |||||||    
T  26868817 tcaccaactaacaatcaaacttcacctgaacaacacacagcttctgaccaaccttctacatctca 26868753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 109 - 355
Target Start/End: Original strand, 28378106 - 28378348
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28378106 aaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaagtgttcctgaacaacctgttcctga 28378205  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaacta-atcaccaactatcaatct 307  Q
    ||||||||||||||| ||||||||||||  | |||| | |||||| |||||| |||||   ||| |||||  |   ||| | | || |||| ||||||||    
T  28378206 acacattgtttctgaccaacaacaaactgtctctgacctaccccaacctaactcagaa---caaccagaa--caacaacaagaacaacaaccatcaatct 28378300  T
Q  308 aacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  28378301 aacttctcctgaacaacaaacagcttctgaccaaccttctacatctca 28378348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 149 - 355
Target Start/End: Original strand, 24423821 - 24424021
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaa 248  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24423821 tgttcctaaacaagttgcttctgaccaagaacaaagtgttcctgaacaatctgttcctgaacacaatgtttctgaacaacaacaaactaccactgaacaa 24423920  T
Q  249 ccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctctt 348  Q
    |||||||||||| ||||| | | ||||  ||||       |||||||||| |||||  ||||  ||||||||||||||||||||||||||||||| |||     
T  24423921 ccccagcctaacacagaacaac-aacaacaacc-----agaatcaccaaccatcaacttaaccactcctgaacaacaaacagcttctgaccaaccttcta 24424014  T
Q  349 catctca 355  Q
    |||||||    
T  24424015 catctca 24424021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 125 - 248
Target Start/End: Original strand, 21170792 - 21170915
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaa 224  Q
    |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||| | |||||||| |||||| |||||||| ||||||| |     
T  21170792 tgagcaaactgttcctgaacaaattgttcctgaacaggttgcttctgaccaagaacaaggtgcttctgaacaatctgttcatgaacacaatgtttctaac 21170891  T
Q  225 caacaacaaactaccactgaacaa 248  Q
    ||||||||||||| ||| ||||||    
T  21170892 caacaacaaactaacacagaacaa 21170915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 355
Target Start/End: Original strand, 20415973 - 20416192
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||| |||  |||||||||||||||||||||| ||||| |||||||| ||||||||||| ||| |||||               |||||||||    
T  20415973 aaactcaaaccatcccagagcaaattgttcctgaacatactgttcatgaacaaggtgcttctgacctagagcaaag---------------tgttcctga 20416057  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatcta 308  Q
    |||||||| |||||   | ||||||||||||||||||||||||||||||||| |||||     ||||  ||||       |||||||||| |||||||||    
T  20416058 acacattgcttctg---accaacaaactaccactgaacaaccccagcctaacacagaa----caacaacaacc-----agaatcaccaaccatcaatcta 20416145  T
Q  309 acttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  20416146 acttctcctgaacaacaaacagcttctgaccaaccttctacatctca 20416192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 266
Target Start/End: Original strand, 28730242 - 28730370
Alignment:
Q  138 cctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaacta 237  Q
    |||||||| | |||||||||||| |||| |||||||||||||||| ||| | ||||||||  ||||| |||| ||| ||||||| | |||||||||||||    
T  28730242 cctgaacaaactgttcctgaacaggttgtttctgaccaagaacaaggtgcttctgaacaatatgttcatgaatacaatgtttctaaccaacaacaaacta 28730341  T
Q  238 ccactgaacaaccccagcctaacccagaa 266  Q
    |||| ||||||||||| |||||| |||||    
T  28730342 ccacagaacaaccccaacctaacacagaa 28730370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 26869113 - 26869045
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  26869113 cacttcacaacctagaaaaacatctaggaggtgaaatgaaaccaacacccacaaaggcctctaaaacag 26869045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 28377989 - 28378057
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| ||||||||||||||| ||||||| |||| ||||||||| | ||||||||||||||||||||    
T  28377989 cacttcacaacctagaaaaacatttaggaggagaaatgcaaccaacccccacaaaggcctctaaaacag 28378057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 9771669 - 9771735
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  9771669 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 9771735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 9906492 - 9906558
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||    
T  9906492 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctagaacag 9906558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 22765700 - 22765634
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||||||||| ||| |||||||||||| ||||||||| | ||||||||||||||||||||    
T  22765700 cttcacaacctagaaaagcatttaggaggtgaaatgcaaccaacccccacaaaggcctctaaaacag 22765634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 24423682 - 24423748
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  24423682 cttcacaacctagaaaaacatttaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 24423748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 20415856 - 20415924
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| |||||||||||||||||||||| |||   ||||| ||||| ||||||||||||||||||||    
T  20415856 cacttcacaacctagaaaaacatctaggagttgaggtgcaactaacacccacaaaggcctctaaaacag 20415924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 10268874 - 10268808
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  10268874 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 10268808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 11403783 - 11403849
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  11403783 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 11403849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 21170664 - 21170730
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||| |||| |||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  21170664 cttcacaacctagaaagacatttaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 21170730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 27223309 - 27223243
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  27223309 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 27223243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 28730116 - 28730182
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  28730116 cttcacaacctagaaaagcatttaggtggtgaaatgcaacctacacccacaaaggcctctaagacag 28730182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 35254886 - 35254828
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  35254886 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 35254828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 35265495 - 35265437
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  35265495 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 35265437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 43347285 - 43347219
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| || |||||||| ||||    
T  43347285 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaagcctctaagacag 43347219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 29246004 - 29245952
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  29246004 tgagcaaactgttcctgaacaaactgttcctgaacaagctgcttctgaacaag 29245952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 34799155 - 34799211
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||  |||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  34799155 tagaaaaacacttaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 34799211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 40224188 - 40224132
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||  |||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  40224188 tagaaaaacacttaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 40224132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 21170962 - 21171004
Alignment:
Q  313 ctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||| |||||||||||||||||||| ||| |||||||    
T  21170962 ctcctgaacatcaaacagcttctgaccaaccttctacatctca 21171004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 29246123 - 29246057
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  29246123 cttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 29246057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 43084586 - 43084520
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  43084586 cttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 43084520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 4211703 - 4211651
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| ||||| |||||| | |||||||||||||| ||||||||| ||||    
T  4211703 tgagcaaactgttcttgaacaaactgttcctgaacaagatgcttctgaacaag 4211651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 9771782 - 9771834
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| ||||| |||||| | |||||||||||||| ||||||||| ||||    
T  9771782 tgagcaaactgttcatgaacaaactgttcctgaacaagatgcttctgaacaag 9771834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 22958754 - 22958806
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  22958754 tgagcaaaatgttcctgagcaaactgttcctgaacaagatgcttctgaacaag 22958806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 24336803 - 24336855
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| ||||| |||||| | |||||||||||||| ||||||||| ||||    
T  24336803 tgagcaaactgttcttgaacaaactgttcctgaacaagctgcttctgaacaag 24336855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 91 - 355
Target Start/End: Complemental strand, 13915059 - 13914795
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    ||||| |||||||| |  ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  13915059 aaacaaacccccaaactgaaactcaaaccgtccctgagcaaattgttcctgaacttactgttcctgaacaagttgcttctgaccaagagcaaagtgttcc 13914960  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaa 290  Q
     |||||||||||||||||||||||||||||||| |||||||||||| || |||| | ||| || |||||| ||||| | ||| ||||||  |||||| |     
T  13914959 agaacaacctgttcctgaacacattgtttctgaccaacaacaaactgcctctgacctacctcaacctaacacagaacaacaaccagaaaatcttaaccac 13914860  T
Q  291 tcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||   |||| ||||   ||||| ||||| || || |||||| |||| |||||||||||    
T  13914859 tcaccaactcaaaatcaaactatccctgagcaacacactgcctctgacaaaccttcttcatctca 13914795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 91 - 355
Target Start/End: Original strand, 18924335 - 18924587
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    ||||||| |||||| |  ||||||||||| |||  |||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||    
T  18924335 aaacagaaccccaaactgaaactcaaaccatcccagagcaaattgttcctgaacatactgttcctgaacaaggtgcttctgacctagagcaaagtgttcc 18924434  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaa 290  Q
    |||||||| ||||||||||||||||   ||||   | || ||||||||| |||||||| ||||| ||||| |||||     ||||  ||||       ||    
T  18924435 tgaacaacatgttcctgaacacatttcctctg---accagcaaactacctctgaacaatcccagtctaacacagaa----caacaacaacc-----agaa 18924522  T
Q  291 tcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  18924523 tcaccaaccatcaatctaacttctcctgaacatcaaacagcttctgaccaaccttctacatctca 18924587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 22287827 - 22287726
Alignment:
Q  126 gagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaac 225  Q
    ||||||| |||||||||||| | |||||  ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| | |||| ||||||    
T  22287827 gagcaaaatgttcctgaacaaactgttctcgaacaagttacttctgaccaagagcaaagtgttcctgaacaaactgttcctgaacaaactgttcctgaac 22287728  T
Q  226 aa 227  Q
    ||    
T  22287727 aa 22287726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 20058908 - 20059025
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaa 248  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||| | ||||| ||||||| | ||||||||| | | | ||||||||||  ||||||    
T  20058908 tgttcctgaacaagttgcttctgacctagaacaaactgttcctgaaccaactgtttctgaacatactgtttctgacctagatcaaactaccatagaacaa 20059007  T
Q  249 ccccagcctaacccagaa 266  Q
    ||| || ||||| |||||    
T  20059008 ccctagactaacacagaa 20059025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 17044646 - 17044578
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||    
T  17044646 cacttcacaacctagaaaaacatttaggaggtgaaatgcaaccaacccccacaaaggcctctaaaacag 17044578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 18924236 - 18924304
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| ||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||||    
T  18924236 cacttcacaacctagaaaaacatcttggaggtgaaatgcaaccaacacctacaaaggcctctaaaacag 18924304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 25795806 - 25795738
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| |||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||| ||||    
T  25795806 cacttcacaacctagaaaaacacctaggaggagaaatgcaaccaacacccacaaaggcctctaagacag 25795738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 9121385 - 9121451
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  9121385 cttcacaacctagaaaaacatttaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 9121451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 18833175 - 18833241
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||| |||||||||||| |||| |||| |  |||||||||||||||||||    
T  18833175 cttcataacctagaaaaacatttaggaggtgaaatgcaatcaacccctacaaaggcctctaaaacag 18833241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 22287959 - 22287893
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||| |||||||||| | ||||||||| |  |||||||||||||||||||    
T  22287959 cttcataacctagaaaaacatttaggaggtgagatgcaaccaacccctacaaaggcctctaaaacag 22287893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 25684862 - 25684928
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||||||||| ||| |||||||||||| ||||||||| | ||||||||||||||||||||    
T  25684862 cttcacaacctagaaaagcatttaggaggtgaaatgcaaccaacccccacaaaggcctctaaaacag 25684928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 25733678 - 25733744
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||||||||| ||| |||||||||||| ||||||||| | ||||||||||||||||||||    
T  25733678 cttcacaacctagaaaagcatttaggaggtgaaatgcaaccaacccccacaaaggcctctaaaacag 25733744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 26866684 - 26866618
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  26866684 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 26866618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 27374696 - 27374630
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||| ||||    
T  27374696 cttcacaacctagaaaaacatctatgtggtgaaatgcaaccaacacccacaaaggcctctaagacag 27374630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 27465053 - 27464987
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||| ||||    
T  27465053 cttcacaacctagaaaaacatctatgtggtgaaatgcaaccaacacccacaaaggcctctaagacag 27464987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 13915154 - 13915090
Alignment:
Q  33 cataacctagaaaaacatctaggaggtgaaacgcaaccaa-cactcacaaaggcctctaaaacag 96  Q
    |||||||||||||||||| |||||||||||| |||||||| | | ||||||||||||||||||||    
T  13915154 cataacctagaaaaacatttaggaggtgaaatgcaaccaaccccccacaaaggcctctaaaacag 13915090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 4632802 - 4632736
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  4632802 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 4632736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 12725767 - 12725833
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  12725767 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 12725833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 16932283 - 16932217
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  16932283 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 16932217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 25789602 - 25789536
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  25789602 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 25789536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 27343619 - 27343553
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  27343619 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 27343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 27404359 - 27404293
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  27404359 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 27404293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 32309975 - 32310041
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  32309975 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 32310041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 27386330 - 27386265
Alignment:
Q  31 ttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||| ||| |||||||||||||||| ||||||| ||||||||||| || |||||||||||| ||||    
T  27386330 ttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccaaaaaggcctctaagacag 27386265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 27476743 - 27476678
Alignment:
Q  31 ttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||| ||| |||||||||||||||| ||||||| ||||||||||| || |||||||||||| ||||    
T  27476743 ttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccaaaaaggcctctaagacag 27476678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 19460343 - 19460391
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctga 172  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||||    
T  19460343 atgagcaaactgttcctgaacttgttgttcctgaacaagttgcttctga 19460391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 26027293 - 26027235
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  26027293 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 26027235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 25733794 - 25733843
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    |||||||| |||||||||||||| |||||||||||||||||  |||||||    
T  25733794 tgagcaaagtgttcctgaacatactgttcctgaacaagttgtctctgacc 25733843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 12856810 - 12856754
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||  |||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  12856810 tagaaaaacacttaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 12856754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 27386240 - 27386164
Alignment:
Q  100 cccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||| || |||| |||||| | | |||||||| |||| |||||||  |||||||||||||||||||| ||||||||    
T  27386240 cccaaacagaaacccaaaccattcctgagcaaactgtttctgaacaagttgttcctgaacaagttgctcctgaccaa 27386164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 27476653 - 27476577
Alignment:
Q  100 cccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||| || |||| |||||| | | |||||||| |||| |||||||  |||||||||||||||||||| ||||||||    
T  27476653 cccaaacagaaacccaaaccattcctgagcaaactgtttctgaacaagttgttcctgaacaagttgctcctgaccaa 27476577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 34816206 - 34816258
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  34816206 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 34816258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 25795617 - 25795560
Alignment:
Q  289 aatcaccaactatcaatctaacttct---cctgaacaacaaacagcttctgaccaacc 343  Q
    |||||||||| |||||||||||||||   ||||||| ||||||||||| |||||||||    
T  25795617 aatcaccaaccatcaatctaacttcttctcctgaaccacaaacagcttatgaccaacc 25795560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 3663293 - 3663227
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| ||||||||||  |||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  3663293 cttcacaacttagaaaaacacttaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 3663227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 12360040 - 12359974
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  12360040 cttcataacttagaaaagcatttaggtggtgaaatgcaacctacaccaacaaaggcctctaagacag 12359974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 18833292 - 18833338
Alignment:
Q  126 gagcaaattgttcctgaacatattgttcctgaacaagttgcttctga 172  Q
    ||||||| |||||||||||| | |||||||||||||||||| |||||    
T  18833292 gagcaaaatgttcctgaacaaactgttcctgaacaagttgcctctga 18833338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 22287758 - 22287713
Alignment:
Q  129 caaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    |||| |||||||||||| | |||||||||||||||||| |||||||    
T  22287758 caaactgttcctgaacaaactgttcctgaacaagttgcctctgacc 22287713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 25685010 - 25685043
Alignment:
Q  178 aacaaagtgttcctgaacaacctgttcctgaaca 211  Q
    |||||||||||||||||||| |||||||||||||    
T  25685010 aacaaagtgttcctgaacaatctgttcctgaaca 25685043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 27374593 - 27374524
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaaga 178  Q
    |||| |||||| ||| |||||||| |||||  ||||| | |||| |||||||||||||| ||||||||||    
T  27374593 aaacccaaaccatccctgagcaaactgttctggaacaaactgtttctgaacaagttgctactgaccaaga 27374524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 27464950 - 27464881
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaaga 178  Q
    |||| |||||| ||| |||||||| |||||  ||||| | |||| |||||||||||||| ||||||||||    
T  27464950 aaacccaaaccatccctgagcaaactgttctggaacaaactgtttctgaacaagttgctactgaccaaga 27464881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 9121508 - 9121572
Alignment:
Q  114 caaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaaga 178  Q
    |||||| ||| |||||||| |||||  ||||| | || | |||||||||||||||||||||||||    
T  9121508 caaaccatccctgagcaaactgttcaggaacaaactgcttctgaacaagttgcttctgaccaaga 9121572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 20048878 - 20048934
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacata 147  Q
    |||||||  ||||| || ||||||||||| ||| |||||||| ||||||||||||||    
T  20048878 aaacagaaacccaaacagaaactcaaaccatccctgagcaaactgttcctgaacata 20048934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 115; Significance: 2e-58; HSPs: 4)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 109 - 355
Target Start/End: Original strand, 1375 - 1621
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1375 aaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaagtgttcctgaacaacctgttcctga 1474  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatcta 308  Q
    | ||||||||||||| || ||||||||| || |||| | |||||| ||||||  |||| | ||| ||||||  ||||||   |||||||||  | ||| |    
T  1475 aaacattgtttctgaccaccaacaaactgcctctgacctaccccaacctaacttagaacaacaaccagaaaatcttaacctttcaccaactcaccatcaa 1574  T
Q  309 acttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
     ||  || ||| |||||||| |||||||||||||| |||||||||||    
T  1575 cctattcttgagcaacaaactgcttctgaccaaccttcttcatctca 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 109 - 355
Target Start/End: Original strand, 5406 - 5652
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5406 aaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaagtgttcctgaacaacctgttcctga 5505  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatcta 308  Q
    | ||||||||||||| || ||||||||| || |||| | |||||| ||||||  |||| | ||| ||||||  ||||||   |||||||||  | ||| |    
T  5506 aaacattgtttctgaccaccaacaaactgcctctgacctaccccaacctaacttagaacaacaaccagaaaatcttaacctttcaccaactcaccatcaa 5605  T
Q  309 acttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
     ||  || ||| |||||||| |||||||||||||| |||||||||||    
T  5606 cctattcttgagcaacaaactgcttctgaccaaccttcttcatctca 5652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 1270 - 1326
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||| ||||||| |||| ||||||||| | ||||||||||||||||||||    
T  1270 tagaaaaacatttaggaggagaaatgcaaccaacccccacaaaggcctctaaaacag 1326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 5301 - 5357
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||| ||||||| |||| ||||||||| | ||||||||||||||||||||    
T  5301 tagaaaaacatttaggaggagaaatgcaaccaacccccacaaaggcctctaaaacag 5357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 134 - 355
Target Start/End: Original strand, 15205711 - 15205929
Alignment:
Q  134 tgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaa 233  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||  ||||||||||||||||| |||||| || ||| |     
T  15205711 tgttcctgaacatactgttcctgaacaaggtgcttctgacctagaacaaagtgtttctgaacaaaatgttcctgaacacattgcttctgaccagcaaaa- 15205809  T
Q  234 actaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatctaacttctcctgaacaacaaacagctt 333  Q
      | || |||| | |||||| |||||| |||||||||||||||||||||||||| |||||||||||| ||||| |||||| | ||||||||| |||||||    
T  15205810 --tgcctctgacctaccccaacctaacacagaaaatcaaacagaaacccttaaccaatcaccaactaacaatcaaacttcacgtgaacaacacacagctt 15205907  T
Q  334 ctgaccaaccctcttcatctca 355  Q
    |||||||||| ||| |||||||    
T  15205908 ctgaccaaccttctacatctca 15205929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 11537865 - 11537770
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaaca 211  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  11537865 aaccgtccctgagcaaattgttcctgaacatactgttcctgaacaagttgcttctgaccaagagcaaagtgttcctgaacaaactgttcctgaaca 11537770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 109 - 355
Target Start/End: Complemental strand, 16307109 - 16306875
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||||||| | |||||| ||||||||||| || ||||||||||||||||| |||||| ||||| |||||||||||| ||||| ||||||||||    
T  16307109 aaactcaaaccgtccctaagcaaactgttcctgaacctactgttcctgaacaagttgattctgatcaagagcaaagtgttcctaaacaaactgttcctga 16307010  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatcta 308  Q
    ||||||||  ||||   | || ||||||||| |||||||| |||||||||||  |||| | |||     ||||       |||||||||| ||  |||||    
T  16307009 acacattgcctctg---accagcaaactacctctgaacaatcccagcctaacatagaacaccaa----caacc-----agaatcaccaaccatagatcta 16306922  T
Q  309 acttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||| |||||||| |||||||||||||||||||| ||| |||||||    
T  16306921 acttcacctgaacatcaaacagcttctgaccaaccttctacatctca 16306875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 3374777 - 3374674
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaa 224  Q
    ||||||||||||||||||||  | |||||||||||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||| |||||||    
T  3374777 tgagcaaattgttcctgaacccactgttcctgaacaagttgcatctgatcaagagcaaagtgttcctgaacaaactgttcctgaacacattgcttctgaa 3374678  T
Q  225 caac 228  Q
    ||||    
T  3374677 caac 3374674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 19572929 - 19572842
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaaca 196  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  19572929 aaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaaatgttcctgaaca 19572842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 15205554 - 15205622
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15205554 cacttcacaatctagaaaaacatctaggaggtgaaatgcaaccaacacccacaaaggcctctaaaacag 15205622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 10292539 - 10292432
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacatt 215  Q
    |||||||  |||||||| ||||| ||||||   ||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||| ||||||  ||    
T  10292539 aaccgtctctgagcaaagtgttcgtgaacaagctgttcctgaacaagttgcttctgtccaagagcaaaatgttcctgaacaaactgttcttgaacaggtt 10292440  T
Q  216 gtttctga 223  Q
    ||||||||    
T  10292439 gtttctga 10292432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 19572809 - 19572743
Alignment:
Q  289 aatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  19572809 aatcaccaaccatcaatctaacttctcctgaacatcaaacagcttctgaccaaccttctacatctca 19572743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 10292646 - 10292580
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||    
T  10292646 cttcacaacctagaaaaacacctaggaggtgaaatgcaaccaacccccacaaaggcctctaaaacag 10292580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 39519135 - 39519216
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaa 197  Q
    |||| ||| |||||||| |||||||||||| | |||| ||||||||||||||| ||||||||| |||| |||||||||||||    
T  39519135 aaccatccctgagcaaagtgttcctgaacaaactgtttctgaacaagttgcttttgaccaagagcaaaatgttcctgaacaa 39519216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 11537981 - 11537909
Alignment:
Q  21 acatcatcacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaa 93  Q
    |||||| | ||||| ||||||||||||||| |||||||||||| ||||||||| | |||||||||||||||||    
T  11537981 acatcaacccttcacaacctagaaaaacatttaggaggtgaaatgcaaccaacccccacaaaggcctctaaaa 11537909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 19573046 - 19572979
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaaca 95  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||| | |||||||| ||||||||||    
T  19573046 cacttcacaacctagaaaaacatctaggaggagaaatgcaaccaacccccacaaaggtctctaaaaca 19572979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 4996730 - 4996796
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||    
T  4996730 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctagaacag 4996796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 21998363 - 21998297
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  21998363 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 21998297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 30935399 - 30935465
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  30935399 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 30935465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 452507 - 452442
Alignment:
Q  31 ttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  452507 ttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 452442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 14776690 - 14776742
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||||||||    
T  14776690 atgagcaaactgttcctgaacttgttgttcctgaacaagttgcttctgaccaa 14776742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 40469007 - 40469107
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaa 248  Q
    |||||||||||| ||||||||||||||||| | | ||| | |||||||| |||||| ||||||  |||| ||||| ||||||||||| || || ||||||    
T  40469007 tgttcctgaacaggttgcttctgaccaagagctaggtgcttctgaacaatctgttcatgaacatcttgtctctgaccaacaacaaacaacaacagaacaa 40469106  T
Q  249 c 249  Q
    |    
T  40469107 c 40469107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 3374652 - 3374586
Alignment:
Q  289 aatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||| ||  ||||||| |||||||||||||||||| ||||||||||||| ||| |||||||    
T  3374652 aatcaccaacaattgatctaacctctcctgaacaacaaacaacttctgaccaaccttctacatctca 3374586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 24642259 - 24642193
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  24642259 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 24642193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 27658550 - 27658484
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  27658550 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 27658484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 36020237 - 36020171
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  36020237 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 36020171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 39519028 - 39519094
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||  |||||||||| | |||||||||||  |||||||||||| ||||||    
T  39519028 cttcataacctagaaaaacacttaggaggtgagatgcaaccaacacctacaaaggcctctgaaacag 39519094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 55754148 - 55754214
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  55754148 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 55754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 11517148 - 11517083
Alignment:
Q  31 ttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||||||||||||||||||  |||||||||| | ||||||||| |  |||||||||||||||||||    
T  11517148 ttcataacctagaaaaacacttaggaggtgagatgcaaccaacccctacaaaggcctctaaaacag 11517083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 10749506 - 10749564
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  10749506 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 10749564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 10963275 - 10963333
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  10963275 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 10963333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 18761413 - 18761479
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||| ||||||| ||||    
T  18761413 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaagacctctaagacag 18761479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 30935502 - 30935564
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| |||||||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  30935502 aaaccatccatgagcaaactgttcctgagcaaactgttcctgaacaagatgcttctgaacaag 30935564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 11517009 - 11516969
Alignment:
Q  134 tgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  11517009 tgttcctgaacaaactgttcctgaacaagttgcttctgacc 11516969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 16257731 - 16257679
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  16257731 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 16257679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 17919936 - 17919884
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  17919936 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 17919884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 19953385 - 19953437
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  19953385 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 19953437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 16307224 - 16307158
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||||||||||||  |||||||  ||| ||||||||| | |||||| |||||||||||||    
T  16307224 cttcacaacctagaaaaacacttaggaggaaaaatgcaaccaacccccacaaaagcctctaaaacag 16307158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 21998260 - 21998198
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  21998260 aaaccatccctgagcaaactgttcctgagcaaactgttcctgaacaagatgcttctgaacaag 21998198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 24026461 - 24026523
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  24026461 aaaccatccctgagcaaactgttcctgagcaaactgttcctgaacaagatgcttctgaacaag 24026523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 3374892 - 3374839
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaa 93  Q
    ||||||||||| ||||||| |||| ||||||||| | ||||||||||| |||||    
T  3374892 tagaaaaacatttaggaggagaaatgcaaccaacccccacaaaggcctttaaaa 3374839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 24026583 - 24026632
Alignment:
Q  306 ctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||| |||| ||||||||||| ||||||||||||||  |||||||    
T  24026583 ctaacttcttctgaccaacaaacagcctctgaccaaccctccacatctca 24026632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 11537804 - 11537756
Alignment:
Q  126 gagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    ||||||| |||||||||||| | |||||||||||||||||  |||||||    
T  11537804 gagcaaagtgttcctgaacaaactgttcctgaacaagttgtctctgacc 11537756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 109 - 355
Target Start/End: Complemental strand, 193904 - 193670
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||| |||  |||||||||||| ||||||||| |||||||||||||| ||||||| ||| ||| ||||||||||||||||||| |||| ||||    
T  193904 aaactcaaaccatcccagagcaaattgtttctgaacatactgttcctgaacaaggtgcttctaacctagagcaaagtgttcctgaacaacatgtttctga 193805  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatcta 308  Q
    ||||||||  ||||   | ||||||||||||||||||||||||||||||||| |||||     ||||  ||||       |||||||||| |||||||||    
T  193804 acacattgcctctg---accaacaaactaccactgaacaaccccagcctaacacagaa----caacaacaacc-----agaatcaccaaccatcaatcta 193717  T
Q  309 acttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  193716 acttctcctgaacaacaaacagcttctgaccaaccctctacatctca 193670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 194021 - 193953
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| | |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  194021 cacttcacagcctagaaaaacatctaggaggtgaaatgcaaccaacacctacaaaggcctctaaaacag 193953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 99; Significance: 8e-49; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 109 - 355
Target Start/End: Complemental strand, 339 - 111
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||||||| |||||||||| ||||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  339 aaactcaaaccgtccctgagcaaattattcctgaacctactgttcctgaacaagttgcttctgaccaagagcagagtgttcctgaacaacctgttcctga 240  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatcta 308  Q
    ||||||||||||| | |||||||||||| || ||||      ||   || | |||||| | ||| |||||            |||||||| |||||||||    
T  239 acacattgtttctaaccaacaacaaactgcctctga------cctatctcaaccagaacaacaaccagaa------------tcaccaaccatcaatcta 158  T
Q  309 acttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  157 acttctcctgaacaacaaacagcttctgaccaaccttctacatctca 111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 456 - 388
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| ||||||||||||||  ||||||| |||| ||||||||| | ||||||||||||||||||||    
T  456 cacttcacaacctagaaaaacacttaggaggagaaatgcaaccaacccccacaaaggcctctaaaacag 388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 8e-49; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 91 - 233
Target Start/End: Complemental strand, 18155704 - 18155562
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    ||||| || |||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  18155704 aaacaaacacccaaccagaaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaagtgttcc 18155605  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaacaacaa 233  Q
    ||||||| ||||||||||| ||||||||||||| |||| ||||    
T  18155604 tgaacaaactgttcctgaatacattgtttctgaccaaccacaa 18155562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 23467802 - 23467913
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaa 248  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||| | |||||| ||||||||| ||| ||||||||||||||||||||    
T  23467802 tgttcctgaacaagttgcttctgaccaagaacaatgtgtttctgaacaatctgttcataaacacaatgtttctgaccaagaacaaactaccactgaacaa 23467901  T
Q  249 ccccagcctaac 260  Q
     |||||||||||    
T  23467902 tcccagcctaac 23467913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 19226838 - 19226678
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    |||||||  ||||| || ||||||||||| ||| |||||||| |||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||    
T  19226838 aaacagaaacccaaacagaaactcaaaccatccctgagcaaactgttcctgaacaaactgttcttgaacaagttgcttctgacctagaacaaactgttcc 19226739  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccc 251  Q
    ||||| | |||||||||||||   ||||||||| | | | ||||||||||| |||||||||    
T  19226738 tgaaccaactgttcctgaacaggctgtttctgacctagatcaaactaccacagaacaaccc 19226678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 30323673 - 30323758
Alignment:
Q  136 ttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttct 221  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||  ||||||||    
T  30323673 ttcctgagcaaactgttcctgaacaagttgcttctgaccaagaacaaactgttcctgaaccaactgttcctgaacaggttgtttct 30323758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 18155542 - 18155476
Alignment:
Q  289 aatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  18155542 aatcaccaaccatcaatctaacttctcctgaacaacaaacaacttctgaccaaccttctacatctca 18155476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 18155803 - 18155735
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  18155803 cacttcacaacctagaaaaatatctaggaggtgaaatgcaaccaacacccacaaaagcctctaaaacag 18155735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 3834707 - 3834655
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  3834707 atgagcaaagtgttcctgaacaaactgttcctgaacaagttgcttctgaccaa 3834655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 17517483 - 17517535
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  17517483 atgagaaaactgttcctgaacatgttgttcctgaacaagttgcttctgaccaa 17517535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 208519 - 208585
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  208519 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 208585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 722142 - 722208
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  722142 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 722208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 13686927 - 13686993
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  13686927 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 13686993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 29078646 - 29078580
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  29078646 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 29078580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 32086626 - 32086692
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  32086626 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 32086692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 44483038 - 44482972
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  44483038 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 44482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 19130540 - 19130488
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||||||||||||||||||| | |||||||||||||| ||||||||| ||||    
T  19130540 tgagcaaattgttcctgaacaaaatgttcctgaacaagctgcttctgaacaag 19130488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 243736 - 243670
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| |||||||| || ||| ||||||||||| ||||    
T  243736 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaaaacccactaaggcctctaagacag 243670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 797106 - 797040
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| |||||||| || ||| ||||||||||| ||||    
T  797106 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaaaacccactaaggcctctaagacag 797040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 3357574 - 3357632
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  3357574 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 3357632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 9343025 - 9342967
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  9343025 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 9342967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 19226935 - 19226869
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  19226935 cttcataacttagaaaagcatttaggtggtgaaatgcaacctacacccacaaaggcctctaagacag 19226869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 19420353 - 19420287
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  19420353 cttcataacttagaaaagcatttaggtggtgaaatgcaacctacacccacaaaggcctctaagacag 19420287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 36079861 - 36079795
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| || |||||||| ||||    
T  36079861 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaagcctctaagacag 36079795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 36294859 - 36294793
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| ||||||||||||||||  |||||| ||||||||||| ||| ||||||||||| ||||    
T  36294859 cttcacaacttagaaaaacatctaggtagtgaaatgcaaccaacacccactaaggcctctaagacag 36294793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 6152911 - 6152859
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  6152911 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 6152859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 15765484 - 15765540
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||  |||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  15765484 tagaaaaacacttaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 15765540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 15765602 - 15765654
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  15765602 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 15765654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 15789621 - 15789677
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||  |||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  15789621 tagaaaaacacttaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 15789677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 15789739 - 15789791
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  15789739 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 15789791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 23785311 - 23785264
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctga 172  Q
    |||| ||| |||||| |||||| |||||||||||||||||||||||||    
T  23785311 tgaggaaactgttccggaacatgttgttcctgaacaagttgcttctga 23785264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 19130659 - 19130593
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  19130659 cttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 19130593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 19420221 - 19420135
Alignment:
Q  180 caaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    |||| ||||||||||| | |||||||||||||   ||||||||| | | | ||||||||||  |||||||||||| ||||| |||||    
T  19420221 caaactgttcctgaaccaactgttcctgaacaggctgtttctgacctagatcaaactaccatagaacaaccccagactaacacagaa 19420135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 26113119 - 26113057
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  26113119 aaaccatccctgagcaaactgttcctgagcaaactgttcctgaacaagctgcttctgaacaag 26113057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 23372491 - 23372442
Alignment:
Q  126 gagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacca 175  Q
    ||||||| ||||||| |||| | ||||| |||||||||||||||||||||    
T  23372491 gagcaaagtgttcctaaacaaactgttcttgaacaagttgcttctgacca 23372442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 26113212 - 26113156
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  26113212 tagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 26113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 3e-48; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 228
Target Start/End: Complemental strand, 17448545 - 17448408
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    ||||| || |||||| | ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  17448545 aaacaaacacccaacaagaaactcaaaccgtccctgagcaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaagtgttcc 17448446  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaac 228  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  17448445 tgaacaaactgttcctgaacacattgtttctgaccaac 17448408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 228
Target Start/End: Original strand, 34060997 - 34061134
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    ||||| || |||||| | ||||||||||||||| ||| |||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  34060997 aaacaaacacccaacaagaaactcaaaccgtccctgaacaaattgttcctgaacctactgttcctgaacaagttgcttctgaccaagagcaaagtgttcc 34061096  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaac 228  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  34061097 tgaacaaactgttcctgaacacattgtttctgaacaac 34061134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 23404900 - 23405017
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaa 248  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||| ||||||| | ||||||||||||||||| ||||||    
T  23404900 tgttcctgaacaagttgcttctgaccaagaacaatgtgtttctgaacaatctgttcatgaacacaatgtttctaaccaacaacaaactaccacagaacaa 23404999  T
Q  249 ccccagcctaacccagaa 266  Q
     ||||||||||| |||||    
T  23405000 tcccagcctaacacagaa 23405017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 19476401 - 19476498
Alignment:
Q  152 tcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaac 249  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||| |||||||    
T  19476401 tcctgaacatgttgcttctgaccaagaacacggtgttcctgaacaatctgttcctgaacacaatgtttctgaccaacaacaagctaccacagaacaac 19476498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 34061159 - 34061225
Alignment:
Q  289 aatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  34061159 aatcaccaaccatcaatctaacttctcctgaacatcaaacagcttctgaccaaccttctacatctca 34061225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 1113073 - 1112988
Alignment:
Q  136 ttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttct 221  Q
    ||||||| || | ||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||||||||||  ||||||||    
T  1113073 ttcctgagcaaactgttcctgaacaagtcgcttctgaccaagaacaaactgttcctgaaccaactgttcctgaacaggttgtttct 1112988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 20789158 - 20789258
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaa 248  Q
    |||||||||||| ||||||||||||||||||||| ||| | |||||||| |||||| |||||||  ||| ||||| ||||||||||| || || ||||||    
T  20789158 tgttcctgaacaggttgcttctgaccaagaacaaggtgcttctgaacaatctgttcatgaacaccatgtctctgaccaacaacaaacaacaacagaacaa 20789257  T
Q  249 c 249  Q
    |    
T  20789258 c 20789258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 17448383 - 17448329
Alignment:
Q  289 aatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaacc 343  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  17448383 aatcaccaaccatcaatctaacttctcctgaacatcaaacagcttctgaccaacc 17448329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 31446896 - 31446962
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  31446896 cttcacaacctagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 31446962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 31842425 - 31842491
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  31842425 cttcataacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 31842491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 17448636 - 17448576
Alignment:
Q  36 aacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||||| |||| ||||||||| | ||||||||||||||||||||    
T  17448636 aacctagaaaaacatctaggaggagaaatgcaaccaacccccacaaaggcctctaaaacag 17448576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 34060898 - 34060966
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| ||||||||||||||| ||||||| |||| ||||||||| | ||||||||||||||||||||    
T  34060898 cacttcacaacctagaaaaacatttaggaggagaaatgcaaccaacccccacaaaggcctctaaaacag 34060966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 15995130 - 15995064
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  15995130 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 15995064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 23480067 - 23480014
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||    
T  23480067 atgagcaaactgttcctgaacttgttgttcctgaacaagttgcttctgaccaag 23480014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 9344982 - 9345048
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  9344982 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 9345048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 14448858 - 14448792
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  14448858 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 14448792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 14559890 - 14559824
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  14559890 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 14559824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 15767794 - 15767860
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  15767794 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 15767860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 17616091 - 17616157
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  17616091 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 17616157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 17727948 - 17728014
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  17727948 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 17728014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 23305306 - 23305372
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  23305306 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 23305372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 23370963 - 23371029
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  23370963 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 23371029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 23705804 - 23705870
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  23705804 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 23705870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 24589904 - 24589838
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  24589904 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 24589838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 24818709 - 24818643
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  24818709 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 24818643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 27044059 - 27043993
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  27044059 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 27043993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 30229278 - 30229212
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  30229278 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 30229212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 31357565 - 31357631
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  31357565 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 31357631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 36584349 - 36584283
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  36584349 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 36584283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 37731796 - 37731730
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  37731796 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 37731730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 42051804 - 42051870
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  42051804 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 42051870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 21416206 - 21416141
Alignment:
Q  31 ttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||||||||||||||||||  |||||||||| | ||||||||| |  |||||||||||||||||||    
T  21416206 ttcataacctagaaaaacacttaggaggtgagatgcaaccaacccctacaaaggcctctaaaacag 21416141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 21416303 - 21416238
Alignment:
Q  31 ttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||||||||||||||||||  |||||||||| | ||||||||| |  |||||||||||||||||||    
T  21416303 ttcataacctagaaaaacacttaggaggtgagatgcaaccaacccctacaaaggcctctaaaacag 21416238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 39360794 - 39360846
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||||||||||||| ||||    
T  39360794 tgagcaaactgttcctgaacaaactgttcctgaacaagttgcttctgaacaag 39360846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 6984785 - 6984843
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  6984785 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 6984843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 19476298 - 19476363
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||||||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||||||||    
T  19476298 cttcacaacctagaaaa-catttaggtggtgaaatgcaacctacacccacaaaggcctctaaaacag 19476363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 19476508 - 19476558
Alignment:
Q  289 aatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgacc 339  Q
    |||||||||| |||||| || |||||||||||| |||||||||||||||||    
T  19476508 aatcaccaacaatcaatttagcttctcctgaaccacaaacagcttctgacc 19476558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 22684475 - 22684533
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  22684475 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 22684533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 23404760 - 23404826
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||| |||| |||  ||||||| ||||||||||| ||||||||||||||| ||||    
T  23404760 cttcacaacctagaaagacatttagatggtgaaatgcaaccaacacccacaaaggcctctaagacag 23404826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 27469033 - 27469091
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  27469033 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 27469091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 35224513 - 35224579
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| || |||||||| ||||    
T  35224513 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaagcctctaagacag 35224579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 36696736 - 36696802
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| || ||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  36696736 cttcacaacttaaaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 36696802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 39492719 - 39492661
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  39492719 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 39492661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 14039070 - 14039127
Alignment:
Q  31 ttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    |||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  14039070 ttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 14039127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 15995027 - 15994967
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacca 175  Q
    ||||| ||| |||||||| |||||||||||| |||| | |||||||||||||| |||||||    
T  15995027 aaaccatccctgagcaaactgttcctgaacaaattgcttctgaacaagttgctcctgacca 15994967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 22155625 - 22155677
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  22155625 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 22155677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 5292384 - 5292318
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  5292384 cttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 5292318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 20560679 - 20560745
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  20560679 cttcataacttagaaaagcatttaggtggtgaaatgcaacctacaccaacaaaggcctctaagacag 20560745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 27605254 - 27605188
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  27605254 cttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 27605188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 31446999 - 31447101
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    |||| |||||| ||| |||||||| |||||   |||| | |||| ||||||||||||||||||||||||| |   ||||| |||||||  |||||| |||    
T  31446999 aaacccaaaccatccctgagcaaactgttcagaaacaaactgtttctgaacaagttgcttctgaccaagagcttggtgtttctgaacagtctgttcatga 31447098  T
Q  209 aca 211  Q
    |||    
T  31447099 aca 31447101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 31842528 - 31842590
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  31842528 aaaccatccctgagcaaactgttcctgagcaaactgttcctgaacaagatgcttctgaacaag 31842590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 39360813 - 39360867
Alignment:
Q  129 caaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaa 183  Q
    |||| ||||||||||||  ||| | ||||||||||||||||||||||| ||||||    
T  39360813 caaactgttcctgaacaagttgcttctgaacaagttgcttctgaccaacaacaaa 39360867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 20560816 - 20560897
Alignment:
Q  185 tgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    ||||||||||| | || ||||||||||  |||||||||| | | | ||||||||||  |||||||||||| ||||| |||||    
T  20560816 tgttcctgaaccaactattcctgaacaggttgtttctgacctagatcaaactaccatagaacaaccccagactaacacagaa 20560897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 5292281 - 5292221
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacca 175  Q
    ||||| ||| |||||||| ||||||||||||   || | ||||||||||||||||||||||    
T  5292281 aaaccatccctgagcaaactgttcctgaacaagctgcttctgaacaagttgcttctgacca 5292221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 40399519 - 40399571
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| ||||||||||||   |||||||||||||| ||||||||| ||||    
T  40399519 tgagcaaactgttcctgaacaagctgttcctgaacaagctgcttctgaacaag 40399571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 7681112 - 7680955
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||||||||| ||| |||||||| |||||||||||| | |||||||||||| ||||||||||||||||||||| ||| | |||||||| |||||| |||    
T  7681112 aaactcaaaccatccctgagcaaactgttcctgaacaaactgttcctgaacaggttgcttctgaccaagaacaaggtgcttctgaacaatctgttcatga 7681013  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    ||||  ||||||||| ||||||||||||||||| || ||||||||||||||| |||||    
T  7681012 acaccatgtttctgaccaacaacaaactaccacagatcaaccccagcctaacacagaa 7680955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 91 - 266
Target Start/End: Complemental strand, 26562344 - 26562169
Alignment:
Q  91 aaacagacccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcc 190  Q
    |||||||  ||||| || ||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  26562344 aaacagaaacccaaacagaaactcaaaccatccctgagcaaactgttcctgaacatactgttcctgaacaagttgcttctgacctagaacaaactgttcc 26562245  T
Q  191 tgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    ||||  |  |||||||||||| | | ||||||| | | | ||||||||||  ||||||||| || ||||| |||||    
T  26562244 tgaatcaattgttcctgaacagactatttctgacctagatcaaactaccatagaacaaccctagactaacacagaa 26562169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 152696 - 152768
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttct 221  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||||||||||  ||||||||    
T  152696 tgttcctgaacaagtcgcttctgaccaagaacaaactgttcctgaaccaactgttcctgaacaggttgtttct 152768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 12732402 - 12732336
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  12732402 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 12732336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 12742995 - 12742929
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  12742995 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 12742929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 22644624 - 22644573
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacca 175  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  22644624 atgagcaaactgttcctgaacatgttgttcctgaacaagttgctcctgacca 22644573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 3173470 - 3173404
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  3173470 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 3173404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 13424908 - 13424974
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| |||| |||||| ||||||||||||||| ||||    
T  13424908 cttcacaacttagaaaaacatctaggtggtgaaatgcaatcaacacccacaaaggcctctaagacag 13424974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 35399472 - 35399538
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  35399472 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 35399538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 35646997 - 35647063
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  35646997 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 35647063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 38096951 - 38096885
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  38096951 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 38096885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 5835095 - 5835029
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| || |||||||| ||||    
T  5835095 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaagcctctaagacag 5835029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 7509147 - 7509089
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  7509147 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 7509089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 23158162 - 23158228
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  23158162 cttcataacttagaaaagcatttaggtggtgaaatgcaacctacacccacaaaggcctctaagacag 23158228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 26562441 - 26562375
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  26562441 cttcataacttagaaaagcatttaggtggtgaaatgcaacctacacccacaaaggcctctaagacag 26562375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 36245381 - 36245439
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  36245381 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 36245439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 51654825 - 51654883
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  51654825 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 51654883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 47616866 - 47616927
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaa 91  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| || ||||||||    
T  47616866 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaagcctctaa 47616927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 13425036 - 13425088
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  13425036 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 13425088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 21206444 - 21206491
Alignment:
Q  127 agcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    |||||| |||||||||||| ||||||||||||||||||| || |||||    
T  21206444 agcaaactgttcctgaacacattgttcctgaacaagttgtttatgacc 21206491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 21214488 - 21214535
Alignment:
Q  127 agcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    |||||| |||||||||||| ||||||||||||||||||| || |||||    
T  21214488 agcaaactgttcctgaacacattgttcctgaacaagttgtttatgacc 21214535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 12732299 - 12732237
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  12732299 aaaccatccctgagcaaactgttcctgagcaaactgttcctgaacaagatgcttctgaacaag 12732237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 12742892 - 12742830
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  12742892 aaaccatccctgagcaaactgttcctgagcaaactgttcctgaacaagatgcttctgaacaag 12742830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 19180815 - 19180749
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  19180815 cttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 19180749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 12622334 - 12622383
Alignment:
Q  306 ctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||| |||| ||||||||||| ||||||||||||||  |||||||    
T  12622334 ctaacttcttctgaccaacaaacagcctctgaccaaccctccacatctca 12622383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 21865339 - 21865290
Alignment:
Q  306 ctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||| |||| ||||||||||| ||||||||||||||  |||||||    
T  21865339 ctaacttcttctgaccaacaaacagcctctgaccaaccctccacatctca 21865290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 21865464 - 21865415
Alignment:
Q  178 aacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaa 227  Q
    |||||| ||||||||||||| ||||||||||||| | |||| ||||||||    
T  21865464 aacaaactgttcctgaacaaactgttcctgaacaaactgttcctgaacaa 21865415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 4169166 - 4169110
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  4169166 tagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 4169110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 12622207 - 12622259
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  12622207 tgagcaaaatgttcctgagcaaactgttcctgaacaagatgcttctgaacaag 12622259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 19180696 - 19180644
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| || |||||| ||||    
T  19180696 tgagcaaactgttcctgaacaaactgttcctgaacaagctgtttctgaacaag 19180644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 21865447 - 21865399
Alignment:
Q  129 caaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  21865447 caaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 21865399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398 (Bit Score: 67; Significance: 1e-29; HSPs: 4)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 2714 - 2864
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacatt 215  Q
    |||| ||| |||||||| |||||||||||| |||||||||||||| ||||||||||||| ||| ||| ||| | |||||||| |||||  |||||||  |    
T  2714 aaccatccctgagcaaactgttcctgaacaaattgttcctgaacaggttgcttctgacctagaccaaggtgcttctgaacaatctgtttatgaacaccat 2813  T
Q  216 gtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    || ||||| ||||||||||| || || |||||||||||||||||| |||||    
T  2814 gtctctgaccaacaacaaacaacaacagaacaaccccagcctaacacagaa 2864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 10969 - 11119
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacatt 215  Q
    |||| ||| |||||||| |||||||||||| |||||||||||||| ||||||||||||| ||| ||| ||| | |||||||| |||||  |||||||  |    
T  10969 aaccatccctgagcaaactgttcctgaacaaattgttcctgaacaggttgcttctgacctagaccaaggtgcttctgaacaatctgtttatgaacaccat 11068  T
Q  216 gtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    || ||||| ||||||||||| || || |||||||||||||||||| |||||    
T  11069 gtctctgaccaacaacaaacaacaacagaacaaccccagcctaacacagaa 11119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 2598 - 2664
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||| ||||||||| ||||||| ||||||||||| || |||||||||||| ||||    
T  2598 cttcacaacctagaaagacatctaggtggtgaaatgcaaccaacacccaaaaaggcctctaagacag 2664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 10853 - 10919
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||| ||||||||| ||||||| ||||||||||| || |||||||||||| ||||    
T  10853 cttcacaacctagaaagacatctaggtggtgaaatgcaaccaacacccaaaaaggcctctaagacag 10919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 100 - 250
Target Start/End: Complemental strand, 24454 - 24304
Alignment:
Q  100 cccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacc 199  Q
    |||||||| ||||||||||| | | |||||||| ||||||| |||| | ||||| |||||||||| |||||||||||||||||| ||||||||||| | |    
T  24454 cccaaccagaaactcaaaccattcctgagcaaactgttcctaaacaaactgttcttgaacaagtttcttctgaccaagaacaaactgttcctgaaccaac 24355  T
Q  200 tgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaacc 250  Q
    ||||||||||||  |||||||| | | | | ||||||| ||| ||||||||    
T  24354 tgttcctgaacaggttgtttctaacctagaccaaactaacacagaacaacc 24304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 93 - 198
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaa 248  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||   ||||||||| | | | ||||||||||| ||||||    
T  93 tgttcctgaacaagttgcttctgaccaagaacaaactgttcctgaaccaactgttcctgaacaggatgtttctgacctagatcaaactaccacagaacaa 192  T
Q  249 ccccag 254  Q
    ||||||    
T  193 ccccag 198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 21256 - 21188
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  21256 cacttcacaacctagaaaaacatctaggaggtgaaatgcaaccaacacccacaaaggcctctaaaacag 21188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 353
Target Start/End: Original strand, 11764 - 11836
Alignment:
Q  281 ccttaactaatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatct 353  Q
    ||||||| ||||||||| |  ||||| |||||||||||||||||| ||||||||||||||||| ||| |||||    
T  11764 ccttaaccaatcaccaattcacaatcaaacttctcctgaacaacacacagcttctgaccaaccttctacatct 11836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 11651 - 11718
Alignment:
Q  129 caaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaaca 196  Q
    |||| ||| ||||| || |||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  11651 caaactgtccctgagcaaattgttcctgaacaagttgcttctgacctagagcaaagtgttcatgaaca 11718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 11634 - 11682
Alignment:
Q  97 acccccaaccaaaaactcaaaccgtccatgagcaaattgttcctgaaca 145  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  11634 acccccaaccagaaactcaaactgtccctgagcaaattgttcctgaaca 11682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2119 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold2119
Description:

Target: scaffold2119; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 706 - 830
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||| ||||| ||| |||||||| |||||||||||| | |||||||||||| ||||||||||||| ||||||| ||| | ||||||||  ||||| |||    
T  706 aaactgaaaccatccctgagcaaactgttcctgaacaaactgttcctgaacaggttgcttctgacctagaacaaggtgcttctgaacaatttgttcatga 805  T
Q  209 acacattgtttctgaacaacaacaa 233  Q
    ||||  ||| ||||| |||||||||    
T  806 acaccatgtctctgaccaacaacaa 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2119; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 612 - 678
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||| ||||||||| ||||||| | |||| |||| || |||||||||||||||||    
T  612 cttcacaacctagaaagacatctaggtggtgaaatgtaacctacacccaaaaaggcctctaaaacag 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 31738 - 31658
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaaca 196  Q
    |||||||| |||||||| |||||||||||  | |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  31738 aaccgtccctgagcaaagtgttcctgaaccaactgttcctgaacaagttgcttctgaccaagagcaaaatgttcctgaaca 31658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 31845 - 31779
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||||||| |||||||||||| |||||||||| | ||||||||| | ||||||||||||||||||||    
T  31845 cttcataatctagaaaaacatttaggaggtgagatgcaaccaacccccacaaaggcctctaaaacag 31779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 31634 - 31535
Alignment:
Q  256 ctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||||| | |||||||||| ||||||| ||||||||| || || || |||   || ||| ||||| ||  ||||||||||||| |||||||||||    
T  31634 ctaacccagaacaacaaacagaaaaccttaaccaatcaccaaataacactcaaacaattcttgagcaacacacttcttctgaccaaccatcttcatctca 31535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 9e-21; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 25213790 - 25213861
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaac 180  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||| |||||    
T  25213790 aaactcaaaccgtccctgagcaaattgttcctgaacttagtgttcctgaacaaggtgcttctgacctagaac 25213861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 2714608 - 2714674
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  2714608 cttcataacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctaagacag 2714674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 9161568 - 9161482
Alignment:
Q  180 caaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    |||| ||||||||||| | |||||||||||||  |||||||||| | | |||||||||| || |||||||||||||||||| |||||    
T  9161568 caaactgttcctgaaccaactgttcctgaacaggttgtttctgacctagaacaaactactacagaacaaccccagcctaactcagaa 9161482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 465979 - 466045
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| ||||||||||||||||  |||||| ||||||||||| ||||||||||||||| ||||    
T  465979 cttcacaacttagaaaaacatctaggttgtgaaatgcaaccaacacccacaaaggcctctaagacag 466045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 1989471 - 1989405
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  1989471 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 1989405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 8011067 - 8011133
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  8011067 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 8011133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 9087142 - 9087076
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  9087142 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 9087076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 11007090 - 11007024
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  11007090 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 11007024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 25213871 - 25213985
Alignment:
Q  241 ctgaacaaccccagcctaacccagaaaatcaaacagaaacccttaactaatcaccaactatcaatctaacttctcctgaacaacaaacagcttctgacca 340  Q
    |||| ||||| || ||||||  |||| | ||||||||||  |||||| |||||||||||| ||||| ||||| |||||||||||| ||| | ||| ||||    
T  25213871 ctgatcaaccacaacctaacttagaacaacaaacagaaaatcttaaccaatcaccaactaacaatcaaacttttcctgaacaacatacaacctctaacca 25213970  T
Q  341 accctcttcatctca 355  Q
    ||| || ||||||||    
T  25213971 accttcctcatctca 25213985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 26399082 - 26399148
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  26399082 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 26399148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 40051090 - 40051156
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  40051090 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 40051156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 15886605 - 15886666
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaa 91  Q
    ||||| |||||||||| ||||||||| ||||||| |||||| |||| |||||||||||||||    
T  15886605 cttcacaacctagaaagacatctaggtggtgaaatgcaacctacacccacaaaggcctctaa 15886666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 15218202 - 15218150
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| |||||||||||| | |||||||||||||||| |||||||||||    
T  15218202 atgagcaaagtgttcctgaacaaactgttcctgaacaagttacttctgaccaa 15218150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 21001467 - 21001535
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||| |||||| ||| |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  21001467 aaacgcaaaccatccctgagcaaactgttcctgaacaaactgttcctgaacaagctgcttctgaacaag 21001535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 9435049 - 9434986
Alignment:
Q  114 caaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| | |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  9435049 caaaccgttcctgagcaaactgttcctgaacaaactgttcctgaacaagctgcttctgaacaag 9434986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 6876323 - 6876385
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  6876323 aaaccatccctgagcaaactgttcctgaacaaactgttcctgaacaagctgcttctgaacaag 6876385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 11097927 - 11097861
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| |||||| |||| ||| ||||||||||| ||||    
T  11097927 cttcacaacttagaaaaacatctaggtggtgaaatgcaacccacacccactaaggcctctaagacag 11097861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 18421179 - 18421113
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||||||||||||||||| |  |||||||||| | ||||||||| |  |||||||||||||||||||    
T  18421179 cttcataacctagaaaaatacttaggaggtgagatgcaaccaacccctacaaaggcctctaaaacag 18421113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 24736638 - 24736580
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctc 88  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||    
T  24736638 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctc 24736580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 42867764 - 42867698
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| || |||||||| ||||    
T  42867764 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaagcctctaagacag 42867698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 168709 - 168657
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  168709 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 168657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 2714736 - 2714788
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  2714736 tgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 2714788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 5687334 - 5687282
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  5687334 tgagcaaactgttcctgaacaaactgttcctgaacaagctgcttctgaacaag 5687282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 9435174 - 9435106
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  9435174 cacttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 9435106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 15886745 - 15886789
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctga 193  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||    
T  15886745 tgttcctgaacaagttgcttctgacctagaacaaactgtttctga 15886789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 18421062 - 18420990
Alignment:
Q  177 gaacaaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaac 249  Q
    ||||||||||||||||||||| |||||| ||||||  |||||||||| | ||  ||||||| | |||||||||    
T  18421062 gaacaaagtgttcctgaacaaactgttcatgaacaagttgtttctgacctaccccaaactaaccctgaacaac 18420990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 21001362 - 21001430
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  21001362 cacttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 21001430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 14125138 - 14125095
Alignment:
Q  129 caaattgttcctgaacatattgttcctgaacaagttgcttctga 172  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||    
T  14125138 caaactgttcctgaacaaattgttcctgaacaatttgcttctga 14125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 14428534 - 14428491
Alignment:
Q  129 caaattgttcctgaacatattgttcctgaacaagttgcttctga 172  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||    
T  14428534 caaactgttcctgaacaaattgttcctgaacaatttgcttctga 14428491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 466082 - 466144
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| ||||||||| || | |||||||||||||| ||||||||| ||||    
T  466082 aaaccatccctgagcaaactgttcctgagcaaactgttcctgaacaagatgcttctgaacaag 466144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 5687453 - 5687387
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| || |||||||||||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  5687453 cttcacaatctagaaaaacatttaggtggtgaaatgcaacctacacctacaaaggcctctaagacag 5687387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 9161572 - 9161514
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaa 183  Q
    |||||||| |||||||||||  | |||||||||||| |||| |||||||| ||||||||    
T  9161572 tgagcaaactgttcctgaaccaactgttcctgaacaggttgtttctgacctagaacaaa 9161514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 10560146 - 10560080
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| | |||| |||| ||||||||||||||| ||||    
T  10560146 cttcataacttagaaaagcatttaggtggtgaaatgaaacctacacccacaaaggcctctaagacag 10560080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 18421072 - 18421014
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    |||||||| ||| |||| |||||||||||| | ||||| ||||||||||| ||||||||    
T  18421072 aaccgtccctgaacaaagtgttcctgaacaaactgttcatgaacaagttgtttctgacc 18421014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 25209997 - 25210051
Alignment:
Q  28 cacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaa 82  Q
    ||||||| || |||||||||||| |||||||||||| ||||||||| | ||||||    
T  25209997 cacttcacaatctagaaaaacatttaggaggtgaaatgcaaccaacccccacaaa 25210051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 6876448 - 6876497
Alignment:
Q  306 ctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||| ||| |||| ||||||||||||||||||||||||||  |||||||    
T  6876448 ctaacctcttctgaccaacaaacagcttctgaccaaccctccacatctca 6876497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 17959280 - 17959329
Alignment:
Q  306 ctaacttctcctgaacaacaaacagcttctgaccaaccctcttcatctca 355  Q
    ||||||||| |||| ||||||||||| ||||||||||||||  |||||||    
T  17959280 ctaacttcttctgaccaacaaacagcctctgaccaaccctccacatctca 17959329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 4213838 - 4213786
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||| ||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  4213838 tgagaaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 4213786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 8619098 - 8619058
Alignment:
Q  306 ctaacttctcctgaacaacaaacagcttctgaccaaccctc 346  Q
    ||||||||| |||| ||||||||||| ||||||||||||||    
T  8619098 ctaacttcttctgaccaacaaacagcctctgaccaaccctc 8619058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 9161690 - 9161634
Alignment:
Q  40 tagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  9161690 tagaaaagcatttaggtggtgaaatgcaacctacacccacaaaggcctctaagacag 9161634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 22090995 - 22090947
Alignment:
Q  129 caaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  22090995 caaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 22090947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1216 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 249
Target Start/End: Complemental strand, 951 - 811
Alignment:
Q  109 aaactcaaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctga 208  Q
    ||||| ||||| ||| |||||||| |||||  ||||| | |||| ||||||||||||||||||||||||| | | ||| | |||||||| |||||| |||    
T  951 aaactgaaaccatccctgagcaaactgttcaggaacaaactgtttctgaacaagttgcttctgaccaagagctaggtgcttctgaacaaactgttcatga 852  T
Q  209 acacattgtttctgaacaacaacaaactaccactgaacaac 249  Q
    |||   ||| ||||| ||||||||||| ||| |||| ||||    
T  851 acatcatgtctctgaccaacaacaaacaacctctgaccaac 811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1216; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 1057 - 991
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||| ||||||||| ||||||| |||||| |||| || |||||||||||| ||||    
T  1057 cttcacaacctagaaagacatctaggtggtgaaatgcaacctacacccaaaaaggcctctaagacag 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 177341 - 177293
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaa 197  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  177341 tgttcctgaacaagttgcttctgaccaagagcaaagtgttcctgaacaa 177293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 177466 - 177403
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaa 93  Q
    ||||| ||||||||||| ||| |||||||||||| ||||||||| | |||||||||||||||||    
T  177466 cttcacaacctagaaaagcatttaggaggtgaaatgcaaccaacccccacaaaggcctctaaaa 177403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 4274 - 4208
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||| |||||| |||||||| ||||    
T  4274 cttcacaacctagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaagcctctaagacag 4208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 4134 - 4082
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  4134 tgagcaaactgttcctgaacaaactgttcctgaacaagctgcttctgaacaag 4082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 2860 - 2925
Alignment:
Q  31 ttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||| ||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||    
T  2860 ttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaaggcctctagaacag 2925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 3951 - 3899
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  3951 atgagcaaagtgttcctgaacaaactgttcctgaacaagttgcttctgaccaa 3899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 106955 - 106907
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctga 172  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  106955 atgagcaaactgttcctgaacatgttgttcctgaacaagttgcttctga 106907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 63040 - 62988
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||||||||    
T  63040 atgagcaaactgttcctgaacttgttgttcctgaacaagttgcttctgaccaa 62988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 3210 - 3144
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  3210 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 3144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 33051 - 32985
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  33051 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 32985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 41311 - 41397
Alignment:
Q  180 caaagtgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    |||| |||||||||||   |||||||||||||   | ||||||| | | ||||||||||||| |||||||||||||||||| |||||    
T  41311 caaactgttcctgaacctactgttcctgaacaggctatttctgacctagaacaaactaccacagaacaaccccagcctaacacagaa 41397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 45911 - 45977
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||| ||||||||||| ||||    
T  45911 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccactaaggcctctaagacag 45977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 45703 - 45769
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||| ||||||| ||||    
T  45703 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacacccacaaagacctctaagacag 45769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 45806 - 45868
Alignment:
Q  115 aaaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaag 177  Q
    ||||| ||| |||||||| |||||||||||| | |||||||||||||| ||||||||| ||||    
T  45806 aaaccatccctgagcaaactgttcctgaacaaactgttcctgaacaagatgcttctgaacaag 45868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 212602 - 212536
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||  |||||||||| | ||||||||| |  |||||||||||||||||||    
T  212602 cttcataacctagaaaaacacttaggaggtgagatgcaaccaacccctacaaaggcctctaaaacag 212536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 218471 - 218405
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||  |||||||||| | ||||||||| |  |||||||||||||||||||    
T  218471 cttcataacctagaaaaacacttaggaggtgagatgcaaccaacccctacaaaggcctctaaaacag 218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 212462 - 212414
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaa 197  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  212462 tgttcctgaacaagttgtttctgaccaagagcaaaatgttcctgaacaa 212414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 218331 - 218283
Alignment:
Q  149 tgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaa 197  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  218331 tgttcctgaacaagttgtttctgaccaagagcaaaatgttcctgaacaa 218283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 9355 - 9407
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| |||||||||||| ||||||||||||||||||| |||| |||||    
T  9355 atgagcaaactgttcctgaacacattgttcctgaacaagttgtttctaaccaa 9407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 16766 - 16714
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| |||||||||||| | |||||||||||||||| |||||||||||    
T  16766 atgagcaaagtgttcctgaacaaactgttcctgaacaagttacttctgaccaa 16714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 21905 - 21853
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| |||||||||||| | |||||||||||||||||| |||||||||    
T  21905 atgagcaaagtgttcctgaacaaactgttcctgaacaagttgcctctgaccaa 21853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 129690 - 129615
Alignment:
Q  21 acatcatcacttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    |||||| | ||||||||||||||||||||| |||| || || | ||||||||| |  |||||||||||||||||||    
T  129690 acatcaacccttcataacctagaaaaacatttaggcggcgagatgcaaccaacccctacaaaggcctctaaaacag 129615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 11008 - 10961
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaagttgcttctga 172  Q
    |||||||| ||||||||||| | |||||||||||||||||||||||||    
T  11008 tgagcaaactgttcctgaacttgttgttcctgaacaagttgcttctga 10961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 2163 - 2229
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||  | |||||||| | ||||||||| |  |||||||||||||||||||    
T  2163 cttcataacctagaaaaacactttggaggtgagatgcaaccaacccctacaaaggcctctaaaacag 2229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 2291 - 2341
Alignment:
Q  173 ccaagaacaaagtgttcctgaacaacctgttcctgaacacattgtttctga 223  Q
    |||||| |||||||||||||||||| ||||||||||||| |||| ||||||    
T  2291 ccaagagcaaagtgttcctgaacaaactgttcctgaacaaattgcttctga 2341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 8467 - 8533
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||||||||||||||  |||||| ||| | ||||||||| |  |||||||||||||||||||    
T  8467 cttcataacctagaaaaacacttaggagatgagatgcaaccaacccctacaaaggcctctaaaacag 8533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 8589 - 8647
Alignment:
Q  116 aaccgtccatgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    |||| |||| ||||||| |||||||||||| | |||||||||||||||||| |||||||    
T  8589 aaccatccaagagcaaaatgttcctgaacaaactgttcctgaacaagttgcctctgacc 8647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 2295 - 2343
Alignment:
Q  126 gagcaaattgttcctgaacatattgttcctgaacaagttgcttctgacc 174  Q
    ||||||| |||||||||||| | ||||||||||||| ||||||||||||    
T  2295 gagcaaagtgttcctgaacaaactgttcctgaacaaattgcttctgacc 2343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 2494 - 2560
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  2494 cttcataacttagaaaagcatttaggtggtgaaatgcaacctacacccacaaaggcctctaagacag 2560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 55846 - 55780
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  55846 cttcataacttagaaaagcatttaggtggtgaaatgcaacctacacccacaaaggcctctaagacag 55780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 164375 - 164416
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttg 165  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  164375 atgagcaaactgttcctgaacacattgttcctgaacaagttg 164416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 8424 - 8372
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| ||||| |||||| | |||||||||||||||| |||||||||||    
T  8424 atgagcaaactgttcttgaacaaactgttcctgaacaagttacttctgaccaa 8372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 5142 - 5178
Alignment:
Q  125 tgagcaaattgttcctgaacatattgttcctgaacaa 161  Q
    |||||||| ||||||||||||||||||||||||||||    
T  5142 tgagcaaagtgttcctgaacatattgttcctgaacaa 5178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 22354 - 22314
Alignment:
Q  136 ttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  22354 ttcctgaacatgttgttcctgaacaagttgctcctgaccaa 22314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 366 - 432
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacactcacaaaggcctctaaaacag 96  Q
    ||||||||| ||||||| ||| |||| ||||||| |||||| ||||  |||||||||||||| ||||    
T  366 cttcataacttagaaaagcatttaggtggtgaaatgcaacctacaccaacaaaggcctctaagacag 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 503 - 584
Alignment:
Q  185 tgttcctgaacaacctgttcctgaacacattgtttctgaacaacaacaaactaccactgaacaaccccagcctaacccagaa 266  Q
    ||||||||||| | || ||||||||||  |||||||||| | | | ||||||||||  |||||||||||| ||||| |||||    
T  503 tgttcctgaaccaactattcctgaacaggttgtttctgacctagatcaaactaccatagaacaaccccagactaacacagaa 584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 20299 - 20254
Alignment:
Q  30 cttcataacctagaaaaacatctaggaggtgaaacgcaaccaacac 75  Q
    ||||| ||| |||||||||||||||| ||||||| |||||||||||    
T  20299 cttcacaacttagaaaaacatctaggtggtgaaatgcaaccaacac 20254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 51990 - 52063
Alignment:
Q  138 cctgaacatattgttcctgaacaagttgcttctgaccaagaacaaagtgttcctgaacaacctgttcctgaaca 211  Q
    |||||||| | | |||||||||| ||||||||||||||||| | | ||| | |||||||| |||||| ||||||    
T  51990 cctgaacaaactattcctgaacaggttgcttctgaccaagatctaggtgcttctgaacaatctgttcatgaaca 52063  T

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Target: scaffold0670 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 2558 - 2610
Alignment:
Q  124 atgagcaaattgttcctgaacatattgttcctgaacaagttgcttctgaccaa 176  Q
    ||||||||| |||||||||||| | |||||||||| |||||  ||||||||||    
T  2558 atgagcaaagtgttcctgaacaaactgttcctgaataagttatttctgaccaa 2610  T

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