View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0671_low_22 (Length: 315)
Name: NF0671_low_22
Description: NF0671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0671_low_22 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 78 - 315
Target Start/End: Original strand, 7385731 - 7385968
Alignment:
| Q |
78 |
atatataagtaagaagtctcataaactctaaagtatttagattttaggtaaagatgttgtgtccaactcacttgtataccgttactcttggcgaaatgtg |
177 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |
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| T |
7385731 |
atatataagtaagaagtctcataaactctaaagtatttagattttaggtaaagatgttgtatccaaatcacttgtataccgttactcttggcgaaatgtg |
7385830 |
T |
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| Q |
178 |
gatgatcctctaggttaccgttgtgatccaacagtggtataagaaccgatggttcaacttgcgtttaatcgactctttgtgtcgaaagtctttctaacaa |
277 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
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| T |
7385831 |
gatgatcccctaggttaccgttgtgatccaacagtggtataagaaccgatggttcaacttgcgttcaatcgactctttgtgtcgaaagtctttttaacaa |
7385930 |
T |
|
| Q |
278 |
tgatggtcagggagacgtattccgttgacgcaacaaca |
315 |
Q |
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||||||| ||||||||||||| |||||||||||||||| |
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| T |
7385931 |
tgatggttagggagacgtatttcgttgacgcaacaaca |
7385968 |
T |
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