View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0671_low_33 (Length: 265)
Name: NF0671_low_33
Description: NF0671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0671_low_33 |
 | |
|
| [»] scaffold0066 (1 HSPs) |
| | |
|
| [»] scaffold0032 (1 HSPs) |
| | |
|
| [»] scaffold0004 (3 HSPs) |
| | |
|
| [»] scaffold0334 (1 HSPs) |
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|
| [»] scaffold0789 (1 HSPs) |
| | |
|
| [»] scaffold0084 (1 HSPs) |
| | |
|
| [»] scaffold0120 (2 HSPs) |
| | |
|
| [»] scaffold0435 (1 HSPs) |
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| [»] scaffold0183 (1 HSPs) |
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|
| [»] scaffold0315 (1 HSPs) |
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|
| [»] scaffold0175 (1 HSPs) |
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| [»] scaffold0324 (1 HSPs) |
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| [»] scaffold0261 (1 HSPs) |
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| [»] scaffold0227 (1 HSPs) |
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| [»] scaffold0080 (1 HSPs) |
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| [»] scaffold0007 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 231
Target Start/End: Complemental strand, 24848935 - 24848724
Alignment:
| Q |
20 |
aggagcagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagag |
119 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
24848935 |
aggaacagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttttaaagtaatttcatcaggaataactctagag |
24848836 |
T |
|
| Q |
120 |
gctttttctaggttggattcaacacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgg |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24848835 |
gctttttctaggttggattcaacacctggtaattcgcctgagtagtgattgaccagattctccaaaactgatggttctgaagtttgagtagttgaagtgg |
24848736 |
T |
|
| Q |
220 |
gatgagatgatg |
231 |
Q |
| |
|
|||||||||||| |
|
|
| T |
24848735 |
gatgagatgatg |
24848724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 23236780 - 23236846
Alignment:
| Q |
39 |
caggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcag |
105 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||| |||| |||||||| |
|
|
| T |
23236780 |
caggttgttgaggccatttgtaagtttcgtgcttgatgttgggggctttctaaggtaacttcatcag |
23236846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 24378967 - 24379149
Alignment:
| Q |
46 |
ttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacc |
145 |
Q |
| |
|
|||||| |||||||| ||| |||| |||||||||||||||||||||||||| |||| || | ||| ||||| |||| ||||| || ||| ||| |
|
|
| T |
24378967 |
ttgaggccatttgtacgttaggtgcttgttgttgggggctttctaaagtaacttcactagaagctactttagagactttctctagatttagctcacaacc |
24379066 |
T |
|
| Q |
146 |
tggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatgagatg |
228 |
Q |
| |
|
||||||||| | | || |||||||||||| |||| |||||||||| |||| ||| || || |||| ||| |||||||||||| |
|
|
| T |
24379067 |
tggtaattcacttaaggagtgattgaccagattccccaaaactgaaggttttgatgtatgggtagatgagttgggatgagatg |
24379149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 21367167 - 21367371
Alignment:
| Q |
25 |
cagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggcttt |
124 |
Q |
| |
|
||||||| |||| |||||||||| ||| ||| || |||||||| |||||||| |||||||||||||| || |||| || | ||| ||||||||| |
|
|
| T |
21367167 |
cagagacttctgggcaggttgttaaggccatacatacgtttggtgcttgttgttcggggctttctaaagcaacttcactagaagctacttcagaggcttt |
21367266 |
T |
|
| Q |
125 |
ttctaggttggattcaacacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatga |
224 |
Q |
| |
|
||| |||| ||||| ||||||| ||| |||||||||||| | |||| |||||| || || || ||| ||||||| | ||||||||||| |||||| |
|
|
| T |
21367267 |
--ctaaattgggctcaacgcctggtagttcacctgagtagtgactaaccagattctctaagacagagggtcctgaagtataggtagttgaagtaggatga |
21367364 |
T |
|
| Q |
225 |
gatgatg |
231 |
Q |
| |
|
||||||| |
|
|
| T |
21367365 |
gatgatg |
21367371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 18939822 - 18939872
Alignment:
| Q |
53 |
catttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatc |
103 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
18939822 |
catttgtgtgtttggtgtttgttgttgggggctttctaaagcaacttcatc |
18939872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 104; Significance: 6e-52; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 54 - 229
Target Start/End: Original strand, 21693459 - 21693634
Alignment:
| Q |
54 |
atttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacctggtaatt |
153 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||||| |||| |||||||||||||||| |
|
|
| T |
21693459 |
atttgtaagtttggtgcttgttgttgggggctttctacagtaatttcctcagaaataactctagaagctttttctagattgggctcaacacctggtaatt |
21693558 |
T |
|
| Q |
154 |
cgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatgagatga |
229 |
Q |
| |
|
| || ||||||||| |||||| |||||||||||| || ||||||||||| || || ||||||||||||||||||| |
|
|
| T |
21693559 |
caccagagtagtgactgaccagattctccaaaacagacggttctgaagtatgggtgattgaagtgggatgagatga |
21693634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 13650729 - 13650856
Alignment:
| Q |
40 |
aggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattc |
139 |
Q |
| |
|
|||| ||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||| | || | |
|
|
| T |
13650729 |
aggtagttgaggccatttgtgcatttggtgcttgttgttgggggctttctaaagtaacttcatcaggagctactttagaggctttttctagatagggctt |
13650828 |
T |
|
| Q |
140 |
aacacctggtaattcgcctgagtagtga |
167 |
Q |
| |
|
||||||||||| ||| |||||||||||| |
|
|
| T |
13650829 |
aacacctggtagttcacctgagtagtga |
13650856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 13030356 - 13030220
Alignment:
| Q |
39 |
caggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggatt |
138 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||| |||| || | ||| ||||||||||||||| | | | |
|
|
| T |
13030356 |
caggttgatgaggccatttgtaagtttggtgcttgttgttgggggttttctaaagtaacttcactagaagctacttcagaggctttttctagataaggct |
13030257 |
T |
|
| Q |
139 |
caacacctggtaattcgcctgagtagtgattgaccaa |
175 |
Q |
| |
|
|| |||||||||||| |||||||||||||||||||| |
|
|
| T |
13030256 |
cacaacctggtaattcacctgagtagtgattgaccaa |
13030220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 13136242 - 13136115
Alignment:
| Q |
40 |
aggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattc |
139 |
Q |
| |
|
|||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| || ||||| | ||| ||||||| ||||||| | | || |
|
|
| T |
13136242 |
aggttgatgaggccatctgtaagtttggtgcttgttgttgggggctttctaaagtaacttaatcagaagctacttcagaggctctttctagatatggctc |
13136143 |
T |
|
| Q |
140 |
aacacctggtaattcgcctgagtagtga |
167 |
Q |
| |
|
||||||||||| ||| | |||||||||| |
|
|
| T |
13136142 |
aacacctggtagttcacttgagtagtga |
13136115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 22576176 - 22576124
Alignment:
| Q |
53 |
catttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcag |
105 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| ||||||||| || |||||||| |
|
|
| T |
22576176 |
catttgtgagtttggtgcttgttgttgggggttttctaaagcaacttcatcag |
22576124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 333536 - 333577
Alignment:
| Q |
64 |
ttggtgtttgttgttgggggctttctaaagtaatttcatcag |
105 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| |||||||| |
|
|
| T |
333536 |
ttggtgattggtgttgggggctttctaaagtaacttcatcag |
333577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 39 - 231
Target Start/End: Original strand, 15141212 - 15141404
Alignment:
| Q |
39 |
caggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggatt |
138 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| ||| | ||| ||||||| ||||||| || | | |
|
|
| T |
15141212 |
caggttgttgaggccatttgtaagtttggtgcttgttgttgggggctttctaaagtaacttcaccagaagctacttcagaggctctttctagattaggct |
15141311 |
T |
|
| Q |
139 |
caacacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatgagatgatg |
231 |
Q |
| |
|
|| |||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
15141312 |
cacaacctggtaattcacctgagtagtgattgaccagattctccaaaacagatggttctaaagtttgggtagttgaattgggatgagatgatg |
15141404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 13001728 - 13001543
Alignment:
| Q |
46 |
ttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacc |
145 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||| || | ||||| || |
|
|
| T |
13001728 |
ttgaggccatttgtaagtttggtgcatgttgttgggggctttctaaagtaacttcatcagaatctacttcagaggctttttctagattaggttcaaatcc |
13001629 |
T |
|
| Q |
146 |
tggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatgagatgatg |
231 |
Q |
| |
|
||||||||| ||| |||||||| ||| | || ||||| ||||| || |||||||| ||||||| ||||||||||||||| |
|
|
| T |
13001628 |
tggtaattcatatgaatagtgattatccagttcatcgaaaacagatggatcagaagtttgggtagttggtttgggatgagatgatg |
13001543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 19619312 - 19619227
Alignment:
| Q |
20 |
aggagcagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcag |
105 |
Q |
| |
|
|||| |||||| |||||| |||||||||||| ||||||| |||||||| ||| |||||||||||||||||||||| |||||||| |
|
|
| T |
19619312 |
aggaacagagatatctgacaaggttgttgaggctatttgtaggtttggtgcttgctgttgggggctttctaaagtaacttcatcag |
19619227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 19607922 - 19607795
Alignment:
| Q |
40 |
aggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattc |
139 |
Q |
| |
|
|||||| ||||| ||| ||||| |||||| | |||||||||||||| ||||||||| |||||||| | ||| | ||||| ||||||| | | || |
|
|
| T |
19607922 |
aggttgatgaggccatctgtaaaattggtgctggttgttgggggcttgctaaagtaacttcatcagaagctacttcaaaggctctttctagatatggctc |
19607823 |
T |
|
| Q |
140 |
aacacctggtaattcgcctgagtagtga |
167 |
Q |
| |
|
||||||||||| ||| |||||||||||| |
|
|
| T |
19607822 |
aacacctggtagttcacctgagtagtga |
19607795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0066 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0066
Description:
Target: scaffold0066; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 20 - 231
Target Start/End: Complemental strand, 59043 - 58832
Alignment:
| Q |
20 |
aggagcagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagag |
119 |
Q |
| |
|
|||| |||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||| || | ||| | || |
|
|
| T |
59043 |
aggaacagagacatctgggcaggttgttgaggccatttgtacgtttggtgcttgttgttgggggctttctaaagtaacttcactagaagctacttcacag |
58944 |
T |
|
| Q |
120 |
gctttttctaggttggattcaacacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgg |
219 |
Q |
| |
|
||||| | |||||| | ||||||||||||| |||| | |||||||||| |||||| |||||| || || || | |||| ||||||| |||||||| | |
|
|
| T |
58943 |
gctttctgtaggttaggttcaacacctggtgattcacatgagtagtgactgaccagattctctaagacagaagtttctaaagtttggtgggttgaagtag |
58844 |
T |
|
| Q |
220 |
gatgagatgatg |
231 |
Q |
| |
|
|||||||||||| |
|
|
| T |
58843 |
gatgagatgatg |
58832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 72; Significance: 8e-33; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 20380610 - 20380400
Alignment:
| Q |
20 |
aggagcagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcagga-ataactctaga |
118 |
Q |
| |
|
|||| |||||||| || |||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| |||||||| | || ||| | | |
|
|
| T |
20380610 |
aggaacagagacagttgggcaggttgttgaggctatttgtaggtttggtgcttgttgttgggggctttctaaagtaacttcatcagaagctacctc-aaa |
20380512 |
T |
|
| Q |
119 |
ggctttttctaggttggattcaacacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgag-tagttgaagt |
217 |
Q |
| |
|
|||| ||||||| || || ||||||||||| ||||| |||||||||||||||||| |||||| |||||||| | |||||| ||| | ||| |||||| |
|
|
| T |
20380511 |
ggctctttctagatttgactcaacacctggaaattcatctgagtagtgattgaccagattctctaaaactgaagtttctgatttttttgttagatgaagt |
20380412 |
T |
|
| Q |
218 |
gggatgagatga |
229 |
Q |
| |
|
|||||||||||| |
|
|
| T |
20380411 |
gggatgagatga |
20380400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 17261291 - 17261494
Alignment:
| Q |
25 |
cagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaa-taactctagaggctt |
123 |
Q |
| |
|
|||||||||||| |||| ||||||| |||||||| |||||| |||||||||||||||||||||| || |||||||| | || ||| | |||||| |
|
|
| T |
17261291 |
cagagacatctggtaaggtagttgaggccatttgtacacttggtgcatgttgttgggggctttctaaagcaaattcatcagaagctacctc-ataggctt |
17261389 |
T |
|
| Q |
124 |
tttctaggttggattcaacacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatg |
223 |
Q |
| |
|
|||||||||| || || ||||||||||||| || || |||||||||||| |||||| || || |||| |||||| ||||| | ||||||| |||||| |
|
|
| T |
17261390 |
tttctaggtttgaccca-cacctggtaattcaccagaacagtgattgaccagattctctaagacagatgtttctgatgtttggtttgttgaagagggatg |
17261488 |
T |
|
| Q |
224 |
agatga |
229 |
Q |
| |
|
|||||| |
|
|
| T |
17261489 |
agatga |
17261494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 18682367 - 18682267
Alignment:
| Q |
53 |
catttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacctggtaat |
152 |
Q |
| |
|
||||||| ||||||||| ||||||||| | |||||||||||||| | |||||| | ||| |||||||||||||| |||| ||||||||| |||||| |
|
|
| T |
18682367 |
catttgtgagtttggtgcttgttgttgtgagctttctaaagtaactccatcagaagctacttcagaggctttttctatattgggttcaacaccaggtaat |
18682268 |
T |
|
| Q |
153 |
t |
153 |
Q |
| |
|
| |
|
|
| T |
18682267 |
t |
18682267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 18727929 - 18727829
Alignment:
| Q |
53 |
catttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacctggtaat |
152 |
Q |
| |
|
||||||| ||||||||| ||||||||| | |||||||||||||| | |||||| | ||| |||||||||||||| |||| ||||||||| |||||| |
|
|
| T |
18727929 |
catttgtgagtttggtgcttgttgttgtgagctttctaaagtaactccatcagaagctacttcagaggctttttctatattgggttcaacaccaggtaat |
18727830 |
T |
|
| Q |
153 |
t |
153 |
Q |
| |
|
| |
|
|
| T |
18727829 |
t |
18727829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 18719643 - 18719525
Alignment:
| Q |
53 |
catttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacctgg--ta |
150 |
Q |
| |
|
||||||| ||||||||| ||||||||| | |||||||||||||| | |||||| | ||| ||||||||||||||| |||| || |||||| || || |
|
|
| T |
18719643 |
catttgtgagtttggtgcttgttgttgtgagctttctaaagtaactccatcagaagctacttcagaggctttttctagattgggtttaacaccaggtata |
18719544 |
T |
|
| Q |
151 |
attcgcctgagtagtgatt |
169 |
Q |
| |
|
|||| |||||||| ||||| |
|
|
| T |
18719543 |
attcacctgagtaatgatt |
18719525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 16190293 - 16190337
Alignment:
| Q |
61 |
agtttggtgtttgttgttgggggctttctaaagtaatttcatcag |
105 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| || |||||||| |
|
|
| T |
16190293 |
agtttggtgcttgttgttgggggctttctaaagcaacttcatcag |
16190337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 231
Target Start/End: Complemental strand, 17255888 - 17255700
Alignment:
| Q |
43 |
ttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaa-taactctagaggctttttctaggttggattcaa |
141 |
Q |
| |
|
||||||||| ||| |||| |||||||| ||||||||||||| ||| |||||||| ||| ||| | || ||| | ||||| | ||||| || || |||| |
|
|
| T |
17255888 |
ttgttgaggccatctgtaggtttggtggttgttgttgggggatttataaagtaacttcgccagaagctacctcaa-aggctctatctagatttgactcaa |
17255790 |
T |
|
| Q |
142 |
cacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatgagatgatg |
231 |
Q |
| |
|
||||||||||||| |||||||| |||||||||| |||||| |||||| ||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17255789 |
cacctggtaattcacctgagtaatgattgaccagattctctaaaactaatgtttctgaagtttggttagttgaagtgggatgagatgatg |
17255700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 17222276 - 17222094
Alignment:
| Q |
46 |
ttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacc |
145 |
Q |
| |
|
|||||| |||||||| ||| |||| ||||||||||||| ||||||||||||||||| | | ||| | ||||||| ||||| | | ||| ||| |
|
|
| T |
17222276 |
ttgaggccatttgtatgttaggtgcttgttgttgggggttttctaaagtaatttcactaaaagctacttcataggctttctctagacttgcctcacaacc |
17222177 |
T |
|
| Q |
146 |
tggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatgagatg |
228 |
Q |
| |
|
||||||||| ||||||| ||||||||||| ||||||||||||||| |||||| |||| || |||| |||| |||||||||||| |
|
|
| T |
17222176 |
tggtaattcacctgagtggtgattgaccagattctccaaaactgaaggttcttaagtatgggtagatgaattgggatgagatg |
17222094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 16656925 - 16656862
Alignment:
| Q |
41 |
ggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatca |
104 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
16656925 |
ggttgttgaggtcatttgtacgtttggtgcttgttgttgggggctttctaaagtaacttcatca |
16656862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 12960212 - 12960137
Alignment:
| Q |
156 |
cctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatgagatgatg |
231 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||| || |||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
12960212 |
cctgagtagtgattgaccagattctctaaaactgttgtttctgaagtttggttagttgaagagggatgagatgatg |
12960137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 18139683 - 18139531
Alignment:
| Q |
53 |
catttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcagga-ataactctagaggctttttctaggttggattcaacacctggtaa |
151 |
Q |
| |
|
||||||| | |||||||||||||||||| | ||||||||||||| |||| ||| | || ||| || |||| ||||| |||||| |||||||||| || |
|
|
| T |
18139683 |
catttgtgattttggtgtttgttgttggagactttctaaagtaacttcaccagaagctacctc-aggggctctttctgagttggactcaacacctgtcaa |
18139585 |
T |
|
| Q |
152 |
ttcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttg |
205 |
Q |
| |
|
||| || || |||||||| | |||||| || || ||||||||||||||||| |
|
|
| T |
18139584 |
ttcaccagaatagtgatttgttagattctctaatacagatggttctgaagtttg |
18139531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 167
Target Start/End: Complemental strand, 2019 - 1913
Alignment:
| Q |
61 |
agtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacctggtaattcgcctga |
160 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||| ||||| ||| ||||| |
|
|
| T |
2019 |
agtttggtgcttgttgttgagggctttctaaagtaatttcatcagaaataactctagaggctttttttaggtagggctcaacacttggtagttcacctga |
1920 |
T |
|
| Q |
161 |
gtagtga |
167 |
Q |
| |
|
||||||| |
|
|
| T |
1919 |
gtagtga |
1913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 565 - 726
Alignment:
| Q |
20 |
aggagcagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagag |
119 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||||| ||||||||| || |||| || || ||| |||| |
|
|
| T |
565 |
aggaacagagacatctgagcaagttgttgaggccatttgtacgtttggtgcttgttgttgggggatttctaaagcaacttcactagaaactacttcagag |
664 |
T |
|
| Q |
120 |
gctttttctaggttggattcaacacctggtaattcgcctgagtagtgattgaccaaattctc |
181 |
Q |
| |
|
||||| | |||||| | ||||||| ||||||||| || || ||||||||||||| |||||| |
|
|
| T |
665 |
gctttctgtaggttaggctcaacacatggtaattcaccagaatagtgattgaccagattctc |
726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 854 - 969
Alignment:
| Q |
116 |
agaggctttttctaggttggattcaacacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaa |
215 |
Q |
| |
|
||||||||| | |||||| | ||||||| ||||||||| || || ||||||||||||| |||||| || || ||||||| || ||| || || |||||| |
|
|
| T |
854 |
agaggctttctgtaggttaggctcaacacatggtaattcaccagaatagtgattgaccagattctctaagacagatggttttgtagtgtgtgttgttgaa |
953 |
T |
|
| Q |
216 |
gtgggatgagatgatg |
231 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
954 |
gtgggatgagatgatg |
969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 29107 - 29034
Alignment:
| Q |
20 |
aggagcagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaag |
93 |
Q |
| |
|
|||| |||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
29107 |
aggaacagagacatctggaagggttgttgaggttatttgtacgtttggtgcttgttgttgggggctttctaaag |
29034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0334 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0334
Description:
Target: scaffold0334; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 191
Target Start/End: Original strand, 11453 - 11603
Alignment:
| Q |
41 |
ggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcagga-ataactctagaggctttttctaggttggattc |
139 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| ||| | || ||| ||||||| ||||||| || || || |
|
|
| T |
11453 |
ggttgttgaggtcatttgtaggtttggttcttgttgttgggggctttctaaagtaacttcaccagaagctacctc-agaggctctttctagatttgactc |
11551 |
T |
|
| Q |
140 |
aacacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgat |
191 |
Q |
| |
|
||||||||||||||| || || |||||| |||||| ||| || |||| |||| |
|
|
| T |
11552 |
aacacctggtaattcaccagaatagtgactgaccagattttctaaaattgat |
11603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 36135879 - 36136060
Alignment:
| Q |
20 |
aggagcagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagag |
119 |
Q |
| |
|
|||| |||||||||||| | ||| ||||||| ||||| | ||||||||| | ||||||||||||||||||||||| |||| ||| | || ||||| |
|
|
| T |
36135879 |
aggaacagagacatctgggttggtagttgaggccatttctgcgtttggtgtatattgttgggggctttctaaagtaacttcaccagaagctaccttagag |
36135978 |
T |
|
| Q |
120 |
gctttttctaggttggattcaacacctggtaattcgcctgagtagtgattgaccaaattctccaaaactgatggttctgaag |
201 |
Q |
| |
|
||| ||||| |||||| ||||||||||||||||| || || |||||||| || |||||| || || ||||||||||||| |
|
|
| T |
36135979 |
gctctttctgagttggactcaacacctggtaattcaccagaatagtgatttttcagattctctaatacagatggttctgaag |
36136060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0789 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0789
Description:
Target: scaffold0789; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 5282 - 5407
Alignment:
| Q |
40 |
aggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattc |
139 |
Q |
| |
|
||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||||| | ||| ||||||| ||||||| |||| || |
|
|
| T |
5282 |
aggttattgaggccatttgtaagtttggtgcatgttgttgggggctttctaaagtaactgcatcagaagctacttcagaggctctttctagattgggctc |
5381 |
T |
|
| Q |
140 |
aacacctggtaattcgcctgagtagt |
165 |
Q |
| |
|
|| || | ||||||| |||||||||| |
|
|
| T |
5382 |
aaaacatagtaattcacctgagtagt |
5407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0084 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0084
Description:
Target: scaffold0084; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 40231 - 40397
Alignment:
| Q |
62 |
gtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacctggtaattcgcctgag |
161 |
Q |
| |
|
|||||| | ||||||||||| |||||||||||||| |||| ||| | ||| |||||||||| |||| | || ||||||||||||| ||| |||||| |
|
|
| T |
40231 |
gtttggcgattgttgttgggagctttctaaagtaacttcaccagaagctacttcagaggcttttgctagatagggctcaacacctggtagttcacctgag |
40330 |
T |
|
| Q |
162 |
tagtgattgaccaaattctccaaaactgatggttctgaagtttgagtagttgaagtgggatgagatg |
228 |
Q |
| |
|
|||||| | ||| |||||| || |||| || |||||||||||| | |||||||| ||||||||| |
|
|
| T |
40331 |
tagtgactagccagattctctaacactggtgtttctgaagtttggttggttgaagtttgatgagatg |
40397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 35100 - 35035
Alignment:
| Q |
39 |
caggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatca |
104 |
Q |
| |
|
||||||||||||| |||||||||||||| || ||| ||||||||||||||||||| || ||||||| |
|
|
| T |
35100 |
caggttgttgaggccatttgtaagtttgctgcttgatgttgggggctttctaaagcaaattcatca |
35035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 43905 - 43970
Alignment:
| Q |
39 |
caggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatca |
104 |
Q |
| |
|
||||||||||||| |||||||||||||| || ||| ||||||||||||||||||| || ||||||| |
|
|
| T |
43905 |
caggttgttgaggccatttgtaagtttgctgcttgatgttgggggctttctaaagcaaattcatca |
43970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0435 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0435
Description:
Target: scaffold0435; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 1257 - 1137
Alignment:
| Q |
47 |
tgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggattcaacacct |
146 |
Q |
| |
|
||||| ||| ||||||||||||| |||||||| |||||||||||||||| |||||||| | ||| ||||||| ||||||| | || ||||||| | |
|
|
| T |
1257 |
tgaggccatctgtaagtttggtgcttgttgttcggggctttctaaagtatcttcatcagaagctacttcagaggctatttctagatagggctcaacactt |
1158 |
T |
|
| Q |
147 |
ggtaattcgcctgagtagtga |
167 |
Q |
| |
|
|||| ||| |||||||||||| |
|
|
| T |
1157 |
ggtagttcacctgagtagtga |
1137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 978 - 1034
Alignment:
| Q |
46 |
ttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcat |
102 |
Q |
| |
|
|||||| |||||||||||| ||||| |||||||||||||||||| |||||| ||||| |
|
|
| T |
978 |
ttgaggccatttgtaagttaggtgtatgttgttgggggctttctgaagtaacttcat |
1034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 18379897 - 18379961
Alignment:
| Q |
40 |
aggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatca |
104 |
Q |
| |
|
|||||| ||||| |||||| |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
18379897 |
aggttgatgaggcaatttgtgtgtttggtgcttgttgttgggggctttctaaagtaacttcatca |
18379961 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 21627085 - 21627142
Alignment:
| Q |
46 |
ttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatc |
103 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
21627085 |
ttgaggccatttgtgtgtttggtgtttgttgttgtgggctttctaaagcaacttcatc |
21627142 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 20110998 - 20110942
Alignment:
| Q |
25 |
cagagacatctgagcaggttgttgaggtcatttgtaagtttggtgtttgttgttggg |
81 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||| ||| |||| ||||||||||| |
|
|
| T |
20110998 |
cagagacatctgggcaggttgttaaggccatttgtacgttaggtgcttgttgttggg |
20110942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 22804099 - 22804141
Alignment:
| Q |
54 |
atttgtaagtttggtgtttgttgttgggggctttctaaagtaa |
96 |
Q |
| |
|
|||||| | ||||||| |||||||||||||||||||||||||| |
|
|
| T |
22804099 |
atttgtgattttggtgattgttgttgggggctttctaaagtaa |
22804141 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0315 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0315
Description:
Target: scaffold0315; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 19945 - 20000
Alignment:
| Q |
38 |
gcaggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaag |
93 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||| || | |||||||||||||||||| |
|
|
| T |
19945 |
gcagtttgttgaggccatttgtaagtttggtgcttatagttgggggctttctaaag |
20000 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0175
Description:
Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 9646 - 9575
Alignment:
| Q |
53 |
catttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggcttt |
124 |
Q |
| |
|
||||||| ||||||||| || |||||||||| |||||||||||| |||||||| || ||| |||||||||| |
|
|
| T |
9646 |
catttgtgagtttggtgcttattgttgggggatttctaaagtaacttcatcagaaactactttagaggcttt |
9575 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:
Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 1538 - 1594
Alignment:
| Q |
49 |
aggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcag |
105 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||| |
|
|
| T |
1538 |
aggtcatttgtaagttgggttcatgttgttgggggctttctaaaataacttcatcag |
1594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0261 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0261
Description:
Target: scaffold0261; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 3031 - 2899
Alignment:
| Q |
39 |
caggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcaggaataactctagaggctttttctaggttggatt |
138 |
Q |
| |
|
|||||| |||||| |||||||| ||| |||| |||| ||||||||||||| ||||||| |||| || | || |||||||||| ||||| || | |
|
|
| T |
3031 |
caggttattgaggccatttgtacgttaggtgcttgtagttgggggctttccaaagtaacttcactagaagctgctttagaggctttctctagatttagct |
2932 |
T |
|
| Q |
139 |
caacacctggtaattcgcctgagtagtgattga |
171 |
Q |
| |
|
|| |||||||||||| |||||||||||||||| |
|
|
| T |
2931 |
cacaacctggtaattcacctgagtagtgattga |
2899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:
Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 25977 - 26011
Alignment:
| Q |
66 |
ggtgtttgttgttgggggctttctaaagtaatttc |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |
|
|
| T |
25977 |
ggtgtttgttgttgagggctttctaaagtaatttc |
26011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0080 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0080
Description:
Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 22740 - 22805
Alignment:
| Q |
40 |
aggttgttgaggtcatttgtaagtttggtgtttgttgttgggggctttctaaagtaatttcatcag |
105 |
Q |
| |
|
|||||| ||||| |||| || ||||| || |||||| ||||||||||||||||||| |||||||| |
|
|
| T |
22740 |
aggttgatgaggccattcgtgcgtttgatgcttgttgatgggggctttctaaagtaacttcatcag |
22805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 145084 - 145125
Alignment:
| Q |
55 |
tttgtaagtttggtgtttgttgttgggggctttctaaagtaa |
96 |
Q |
| |
|
||||| ||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
145084 |
tttgtgagtttggtgattgttgttgggggttttctaaagtaa |
145125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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