View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0671_low_47 (Length: 214)
Name: NF0671_low_47
Description: NF0671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0671_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 14625864 - 14626021
Alignment:
| Q |
24 |
taggtacccaataagccttcactcagaagcatagttacatattacatgtttggtagtacgaggatataaagcttcaatacacatctgtttgtagtgcccg |
123 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
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| T |
14625864 |
taggtatccaataagccttcactcagaagcatagttacatattacatgtttggtagtatgagaatataaagcttcaatacacatctgtttgtagtgcccg |
14625963 |
T |
|
| Q |
124 |
tattacctaacttttatccaataaatgtctttccaactactcaaatacgatctctgctcc |
183 |
Q |
| |
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|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
14625964 |
tattacctaa-ttttatccaataaatgtctttccaactactc-aatacgatctctgctcc |
14626021 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 17703685 - 17703546
Alignment:
| Q |
24 |
taggtacccaataagccttcactcagaagcatagttacatattacatgtttggtagtacgaggatataaagcttcaatacacatctgtttgtagtgcccg |
123 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
17703685 |
taggtacccaataagccttcactcacaagcatagttacatattacatgtttggtagtatgaggatataaagcttcaatacacatctgtttgtagtgcccg |
17703586 |
T |
|
| Q |
124 |
tattacctaacttttatccaataaatgtctttccaactac |
163 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
17703585 |
tattacctaacttttatccaataaatgtctttccaactac |
17703546 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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