View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0671_low_9 (Length: 483)
Name: NF0671_low_9
Description: NF0671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0671_low_9 |
 |  |
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[»] scaffold0182 (3 HSPs) |
 |  |  |
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Alignment Details
Target: chr7 (Bit Score: 349; Significance: 0; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 8 - 453
Target Start/End: Complemental strand, 21764372 - 21763929
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| |
|
|
T |
21764372 |
cgaacaacatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccagttaaagttaaaacatcatcgctaaaacgacccttcagttc |
21764273 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
|||||| ||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
21764272 |
atcgatgttatcagcaatcttttggtgtagttcctctggattaagtgcggtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
21764173 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccc |
307 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
21764172 |
ttcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtgcttccccaaatttgacatccttctgcggtaatatggcaccc |
21764073 |
T |
 |
Q |
308 |
tttgtatctt-ggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaatatt |
406 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
T |
21764072 |
tttgtatcttgggtcgtgaattttggggtgtttgctttga---ttgtagctccacaaatttttctttaagagtttgggatgccatcattcattcaataca |
21763976 |
T |
 |
Q |
407 |
ctaatggttgagagatattgatcttgcaaagttacgaaattatgaat |
453 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
T |
21763975 |
ctaatggttgagggatattgatcttgcaaagttacgaaatcatgaat |
21763929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 441
Target Start/End: Complemental strand, 21628435 - 21628001
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| |||||||||| |||||||||||||| |||||||| |||||| ||||| ||||| |||||| ||||||||||||||||||||||||||| |
|
|
T |
21628435 |
cgaacaacatccacgacagcttttcttcaaggcatccaaagccttgaagagagtttcccgttaaatttaaaacatcgtcgctaaaacgacccttcagttc |
21628336 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
||| || ||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||| || ||||||| |||||||||||||||||||| |
|
|
T |
21628335 |
atcaatgttatcagcaatctttttgtgtagttcctctggaataagtccaatgttttctatgtattttgatgcccacacaagcttgtacttctctcctatg |
21628236 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccc |
307 |
Q |
|
|
|||||| || ||| |||||||||||||||||||||||| |||||||||| ||| |||||||| |||| | | |||||| | | || | ||||| |
|
|
T |
21628235 |
ttcagatttgtactgccatgatggataggacctattgacacaaacttgggtgagtaatacttcccaaaatcttttttatttctgagatgatcggccaccc |
21628136 |
T |
 |
Q |
308 |
tttgtatc-ttggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaatatt |
406 |
Q |
|
|
|||||||| ||||||||| |||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
T |
21628135 |
tttgtatctttggtcgtgcatttcggggtgtttgctttgaattttttaactccacaaatttttctttaatagtttgggatgccatcattctttcaatata |
21628036 |
T |
 |
Q |
407 |
ctaatggttgagagatattgatcttgcaaagttac |
441 |
Q |
|
|
||||||||||| ||||||||||| |||| |||| |
|
|
T |
21628035 |
ataatggttgaggaatattgatctttcaaacttac |
21628001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 9 - 418
Target Start/End: Complemental strand, 21704952 - 21704542
Alignment:
Q |
9 |
gaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttca |
108 |
Q |
|
|
||||||||||||||||| |||||| ||||||| | |||||||| |||||| ||||| ||| |||||||| ||| |||||||||||||||||||||||| |
|
|
T |
21704952 |
gaacaatatccacgacagcttttcatcaaggcactcaaagccttgaagagagtttccggttagagttaaaacatcatcgctaaaacgacccttcagttca |
21704853 |
T |
 |
Q |
109 |
tcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaaca |
208 |
Q |
|
|
|| || ||||| ||||||| ||||||||||||||||||| ||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
T |
21704852 |
tcaatgttatctgcaatctttttgtgtagttcctctggaataagtccggtgttttctatgtattttgctgcccacataagcttgtacttctctcctaact |
21704753 |
T |
 |
Q |
209 |
tcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccct |
308 |
Q |
|
|
||||| || |||||||||||||||||||||| |||| |||||||||| ||| | || | | || ||| | ||||| | || | | ||||||| |
|
|
T |
21704752 |
tcagagttggattgtcatgatggataggacctatcgacactaacttgggtgagtaatgctgctcaaagttttttctacttctgagatactcttgcaccct |
21704653 |
T |
 |
Q |
309 |
ttgtatc-ttggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaatattc |
407 |
Q |
|
|
||||||| ||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
21704652 |
ttgtatctttggtcgtgcatttggaggtgtttgctttgaattttttaactcgacaaatttttctttaatagtttgggatgccatcattcattcaatataa |
21704553 |
T |
 |
Q |
408 |
taatggttgag |
418 |
Q |
|
|
||||||||||| |
|
|
T |
21704552 |
taatggttgag |
21704542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 8 - 394
Target Start/End: Complemental strand, 21788539 - 21788152
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| |||||||||| ||||||||| ||||| |||||||||||||||||| ||| |||||||||||| |||||||| |||| ||||||||||||| |
|
|
T |
21788539 |
cgaacaacatccacgacagcttttcttcgaggcttccaaagccttcaagagacttgccagttaaagttaaaacatcgtcgccaaaatgacccttcagttc |
21788440 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
||| || ||||| ||||||| |||||| || ||||||||| | || |||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |
|
|
T |
21788439 |
atcaatgttatctgcaatctttttgtgcagatcctctggaatgtgtccagtgttttcgatgtattttgctgcccacataagcttgtacttctctcctaac |
21788340 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccc |
307 |
Q |
|
|
||| || || ||||||||||||||||||||| |||||||||||||| | ||| | |||| | || ||| | |||||| | || | || ||||| |
|
|
T |
21788339 |
ttcaaatttgtgttgtcatgatggataggacctaccgacaacaacttgggcgagtaatgcttctcaaagttttttctatttctgagatactctgccaccc |
21788240 |
T |
 |
Q |
308 |
tttgtatctt-ggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcat |
394 |
Q |
|
|
||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||| |
|
|
T |
21788239 |
tttgtattttcggtcgtgaattttggggtgtttgctttgatttttgtaactccacaaatttttcattaatagtttgggatgccatcat |
21788152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 8 - 415
Target Start/End: Complemental strand, 21652379 - 21651971
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||| ||||| |
|
|
T |
21652379 |
cgaacaacatccacgacaacttttcttcaaggctatcaaagccttcaagagacttgccagttaaagttaaaacatcgtcgctaaaatgaccctttagttc |
21652280 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
| |||||||| ||||||| ||||||| | |||||| || ||| | ||||||||||||||| |||||||||| ||||||| |||| ||||||| |
|
|
T |
21652279 |
gttaattttatcggcaatctttttgtgtcgatcctctagaataaagccgttgttttctatgtattttgctgcccacataagcttatactcctctcctggt |
21652180 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccc |
307 |
Q |
|
|
||| || || ||||||||||||||||||||||||| | |||||||| ||||| | ||| | ||||| | |||||| | || | |||||||| |
|
|
T |
21652179 |
ttcatatttgtattgtcatgatggataggacctattgaaacaaacttgggggtgtaatgtttctcaaaattgtttctatttctgagatactgtggcaccc |
21652080 |
T |
 |
Q |
308 |
tttgtatc-ttggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaatatt |
406 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
T |
21652079 |
tttgtatctttggtcgtgaattttggggtgtttgctttgatttttgtagttccacaaatttttctttaatagtttgggatgccatcattcaatcaatata |
21651980 |
T |
 |
Q |
407 |
ctaatggtt |
415 |
Q |
|
|
|||||||| |
|
|
T |
21651979 |
ataatggtt |
21651971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 8 - 436
Target Start/End: Complemental strand, 21772271 - 21771842
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| ||||||||||||||||||||||||||| |||||||| |||||||| || || ||||||||| ||| ||| |||| ||||||||||||| |
|
|
T |
21772271 |
cgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagttaaaacatcatcgtcaaaatgacccttcagttc |
21772172 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
||| || ||||||||||||| ||||||||| ||||||||| | | | | ||||||||||||| |||||||||| |||| |||||||||||| |||| |
|
|
T |
21772171 |
atcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttattttctatgtattttgctgcccacataagtttgtacttctctgctaat |
21772072 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccc |
307 |
Q |
|
|
||||||| || | | |||||| |||||||||||||||| ||||||||| ||| | |||| | || ||| | |||||| | | | | |||||| |
|
|
T |
21772071 |
atcagatttgtgttatgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagagactttagcaccc |
21771972 |
T |
 |
Q |
308 |
tttgtatctt-ggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaatatt |
406 |
Q |
|
|
|||||||||| |||| ||||||||||||| |||||||||| ||||||| || |||||||||||||||||||||| || |||||||||||||||||||| |
|
|
T |
21771971 |
tttgtatcttcggtcttgaattttggggtatttgctttgatttttgtagttccacaaatttttctttaatagtttcggatgccatcattcattcaatatg |
21771872 |
T |
 |
Q |
407 |
ctaatggttgagagatattgatcttgcaaa |
436 |
Q |
|
|
||||||||||| |||||||||||| |||| |
|
|
T |
21771871 |
ataatggttgagggatattgatctttcaaa |
21771842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 8 - 446
Target Start/End: Original strand, 21808003 - 21808445
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| ||||| |||| |||||||||||||||| ||||||||||||||||| || |||||||||||| |||||||| |||| ||||||||||||| |
|
|
T |
21808003 |
cgaacaacatccatgacagcttttcttcaaggctaccaaagccttcaagagactggccggttaaagttaaaacatcgtcgccaaaatgacccttcagttc |
21808102 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
|||||| ||||||||||||| ||||||||| |||||| || ||| | ||||||||||||||| || | |||| ||||||||||||||||||||||| |
|
|
T |
21808103 |
atcgatgttatcagcaatctttttgtgtagatcctctagaataaagccgctgttttctatgtatttcgcagaccacataagcttgtacttctctcctaac |
21808202 |
T |
 |
Q |
208 |
atcagatctgatctgt-catgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcacc |
306 |
Q |
|
|
|||||| | || | | |||||||||||||||||||||| | ||||||||||| ||| | |||| | | ||||| | |||||| | || | | |||| |
|
|
T |
21808203 |
ttcagat-ttatatttccatgatggataggacctattgataccaacttgggtgagtaatgcttctcaagatttgttctatttctgagatactcagccacc |
21808301 |
T |
 |
Q |
307 |
ctttgtatc-ttggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaa---tagtttggggtgccatcattcattcaa |
402 |
Q |
|
|
||||||||| |||||||||||||||||||| |||| |||||||||| || ||| |||| |||| || || ||||||||| | ||||||||||||||| |
|
|
T |
21808302 |
ctttgtatctttggtcgtgaattttggggtatttgatttgaattttttagctccacaatctttttttcaagggtagtttgggattccatcattcattcaa |
21808401 |
T |
 |
Q |
403 |
tattctaatggttgagagatattgatcttgcaaagttacgaaat |
446 |
Q |
|
|
||| |||||| |||| |||||||||||||||||| ||||||| |
|
|
T |
21808402 |
tataataatggctgaggaatattgatcttgcaaagtaacgaaat |
21808445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 8 - 418
Target Start/End: Complemental strand, 21664411 - 21663994
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaat---atcgtcgctaaaacgacccttcag |
104 |
Q |
|
|
|||||||||||||||||| ||||||||||||||| |||||||||||||||||| || ||||||||||||| ||| ||| |||| |||||||||| |
|
|
T |
21664411 |
cgaacaatatccacgacagcttttcttcaaggcttccaaagccttcaagagacttgccggttaaagttaaaattacatcatcgtcaaaatgacccttcag |
21664312 |
T |
 |
Q |
105 |
ttcatcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcct |
204 |
Q |
|
|
||||||||| |||||| ||||| ||||||||| ||| |||||| ||| || ||||| ||||||| |||||||||| |||||||||||||| ||||| |
|
|
T |
21664311 |
ttcatcgatgttatcaaaaatctttttgtgtagatcccgtggattgagtcttgtattttcaatgtattttgctgcccacataagcttgtacttccctcct |
21664212 |
T |
 |
Q |
205 |
aacatcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggca |
304 |
Q |
|
|
||| ||||||||| || |||||||||||||||||||||||| |||||||||| ||| |||||| | || ||| | |||||| | | | ||||| |
|
|
T |
21664211 |
aacttcagatctgtattgccatgatggataggacctattgacaggaacttgggtgagtaatacttctcaaagttttttctgtttctgagattgtgtggca |
21664112 |
T |
 |
Q |
305 |
ccctttgtatc-ttggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaa---tagtttggggtgccatcattcattc |
400 |
Q |
|
|
||||||||||| ||||||||||| |||||||| ||||||||||||||| || ||| |||| ||||| || || ||||||||| ||||||||||| ||| |
|
|
T |
21664111 |
ccctttgtatctttggtcgtgaactttggggtatttgctttgaattttctagctccacaatttttttttcaagggtagtttgggatgccatcattctttc |
21664012 |
T |
 |
Q |
401 |
aatattctaatggttgag |
418 |
Q |
|
|
||||| ||||||||||| |
|
|
T |
21664011 |
aatataataatggttgag |
21663994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 8 - 430
Target Start/End: Complemental strand, 21726206 - 21725783
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| |||||||||| |||||||||||||||| |||||||| |||||||| || || ||| ||||| ||||||| |||| ||||||||||||| |
|
|
T |
21726206 |
cgaacaacatccacgacagcttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcgtcgtcaaaatgacccttcagttc |
21726107 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
||| || ||||||||||||| ||||||||| ||||||||| | || | |||||||||||||||| |||||||||| |||| ||||||| |||| |||| |
|
|
T |
21726106 |
atcaatgttatcagcaatctttttgtgtagatcctctggaatgtgtccggtgttttctatgtattttgctgcccacataagtttgtactactctgctaat |
21726007 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccc |
307 |
Q |
|
|
||||||| || | | |||||| |||||||||||||||| ||||||||| ||| | |||| | || ||| | |||||| | | | | |||||| |
|
|
T |
21726006 |
atcagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagagactttagcaccc |
21725907 |
T |
 |
Q |
308 |
tttgtatctt-ggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaatatt |
406 |
Q |
|
|
|||||||||| |||| ||||||||||| | |||||||||| ||||||| || |||||||||||||||||||||| || |||||||||||||||||||| |
|
|
T |
21725906 |
tttgtatcttcggtcttgaattttgggatatttgctttgatttttgtagttccacaaatttttctttaatagtttcggatgccatcattcattcaatatg |
21725807 |
T |
 |
Q |
407 |
ctaatggttgagagatattgatct |
430 |
Q |
|
|
||||||||||| || |||||||| |
|
|
T |
21725806 |
ataatggttgagggaaattgatct |
21725783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 436
Target Start/End: Complemental strand, 21714493 - 21714067
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| |||||||| | |||||||||||||||| |||||||||||||||| | || ||| ||||| ||||| | |||| ||||||||||||| |
|
|
T |
21714493 |
cgaacaacatccacgatagcttttcttcaaggctaccaaagccttcaagagaccaactggttgaagctaaaacatcgttgtcaaaatgacccttcagttc |
21714394 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
||| || ||||| ||||||| ||||||||| ||||||||| | || |||||||||||||||| |||||||||| |||| ||||||||||||||| | |
|
|
T |
21714393 |
atcaatgttatctgcaatctttttgtgtagatcctctggaatgtgtctggtgttttctatgtattttgctgcccacataagtttgtacttctctcctttc |
21714294 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctg---cggtaatatggca |
304 |
Q |
|
|
|||||| || ||||||||||||||||||||| ||||| |||||||||| ||| | |||| | ||||||| | |||||| |||| | || |
|
|
T |
21714293 |
ttcagatttggattgtcatgatggataggacctaatgacacaaacttgggtgagtaatgcttctcaaaatttgttctatttctgaaacggtcaac---ca |
21714197 |
T |
 |
Q |
305 |
ccctttgtatctt-ggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaat |
403 |
Q |
|
|
||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
T |
21714196 |
ccctttgtatcttcggtcgtgaattttggggtgtttgcattgatttttgtagctccacaaatttttctttaatagtttgggatgccatccttcattcaat |
21714097 |
T |
 |
Q |
404 |
attctaatggttgagagatattgatcttgcaaa |
436 |
Q |
|
|
| |||| ||||| |||||||||||| |||| |
|
|
T |
21714096 |
a---taatatttgagggatattgatctttcaaa |
21714067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 8 - 418
Target Start/End: Complemental strand, 21992492 - 21992069
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| ||||| |||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||| |
|
|
T |
21992492 |
cgaacaacatccatgacagcttttcttcgaggcttccaaagccttcaagagactttccagctaaagttaaaacatcgtcactaaaatgacccttcagttc |
21992393 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
||| || ||||| ||||| ||||||||| || |||||||||| | | ||||| ||||||| |||||||||| ||||||||||||||||||||||| |
|
|
T |
21992392 |
atcaatgttatcgataatctttttgtgtagatcgcatggattaagtcctgcattttcgatgtattttgctgcccacgtaagcttgtacttctctcctaac |
21992293 |
T |
 |
Q |
208 |
atcagatctg-at--------ctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaat |
298 |
Q |
|
|
|||||| || || || |||||||||||||||||||||||| ||| ||||||| ||||| |||| | || | | | ||| || | || | |
|
|
T |
21992292 |
ttcagatttgcattgcttgtattgccatgatggataggacctattgacaccaatttgggtgagtagtgcttctcaaagtcttttctatttttgagatact |
21992193 |
T |
 |
Q |
299 |
atggcaccctttgtatct-tggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaa---tagtttggggtgccatcat |
394 |
Q |
|
|
|| |||||||||||||| || |||||||||||||||| ||||||||||||||| || ||| |||| |||||||| || |||||||| ||||||||| |
|
|
T |
21992192 |
ctgccaccctttgtatctgtgttcgtgaattttggggtatttgctttgaattttctagctccacaattttttcttcaagggaagtttgggatgccatcat |
21992093 |
T |
 |
Q |
395 |
tcattcaatattctaatggttgag |
418 |
Q |
|
|
||||||||||| ||||||||||| |
|
|
T |
21992092 |
tcattcaatataataatggttgag |
21992069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 10 - 431
Target Start/End: Complemental strand, 21785714 - 21785289
Alignment:
Q |
10 |
aacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttcat |
109 |
Q |
|
|
||||| |||||||||| |||||||||||||||| |||| |||||||||||| || |||||||||||| ||| ||||||||| ||||||||||||||| |
|
|
T |
21785714 |
aacaacatccacgacagcttttcttcaaggctaccaaagtcttcaagagactggccggttaaagttaaaacatcatcgctaaaatgacccttcagttcat |
21785615 |
T |
 |
Q |
110 |
cgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaacat |
209 |
Q |
|
|
|| ||||| ||||||| ||||||||| || |||||| | | | || || | ||||| ||| |||||| |||||||||||||||||||| | | |
|
|
T |
21785614 |
taatgttatcggcaatctttttgtgtagatcgcgtggattgcggcctatattctcgaggtattttgcggcccacataagcttgtacttctctcctgtctt |
21785515 |
T |
 |
Q |
210 |
cagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccctt |
309 |
Q |
|
|
||||| || ||||||||||||||||||||||||||| |||||||||| ||| | |||| | || ||| | | ||||| | || | | |||||||| |
|
|
T |
21785514 |
cagatttggattgtcatgatggataggacctattgacactaacttgggtgagtaatgcttctcaaagtttttcctatttcttagatactcttgcaccctt |
21785415 |
T |
 |
Q |
310 |
tgtatc-ttggtcgtgaattttggggtgtttgctttgaattttgtaactcgacaaatttttctttaa---tagtttggggtgccatcattcattcaatat |
405 |
Q |
|
|
|||||| |||||||||||||||||||| ||||||||||||||| || ||| |||| ||||| || || ||||||||| || ||||||| ||||||||| |
|
|
T |
21785414 |
tgtatctttggtcgtgaattttggggtatttgctttgaattttctagctccacaatttttttttcaagggtagtttgggatgtcatcattgattcaatat |
21785315 |
T |
 |
Q |
406 |
tctaatggttgagagatattgatctt |
431 |
Q |
|
|
|||||||| || |||||||||||| |
|
|
T |
21785314 |
gataatggttaagggatattgatctt |
21785289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 8 - 340
Target Start/End: Complemental strand, 21647053 - 21646720
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| || | |||||||||| |||||||||||| ||||||||||||| |
|
|
T |
21647053 |
cgaacaatatccacgacaacttttcttcaaggctacggaagcctttaagagacttgccggtcaaagttaaaacgtcgtcgctaaaatgacccttcagttc |
21646954 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcc-tctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaa |
206 |
Q |
|
|
||| || ||||| |||||| ||||||||| ||| ||| ||| | | ||||||| ||||||| |||||||||| |||||||||| |||||||||| |
|
|
T |
21646953 |
atcaatgttatctacaatctttttgtgtagatccttcttaatt-cttcccgtgtttttgatgtattttgctgcccacataagcttgtatttctctcctat |
21646855 |
T |
 |
Q |
207 |
catcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcacc |
306 |
Q |
|
|
| |||| | || ||||||||||||||||||||||||||| ||||||||| ||||| | || | | || |||| | |||||| | || | ||||||| |
|
|
T |
21646854 |
cttcagctttggattgtcatgatggataggacctattgacaccaacttgggggtgtaatgctcctcaaattttgttctatttctgagatactgtggcacc |
21646755 |
T |
 |
Q |
307 |
ctttgtatc-ttggtcgtgaattttggggtgtttg |
340 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |
|
|
T |
21646754 |
ctttgtatctttggtcgtgaattttggggtgtttg |
21646720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 8 - 454
Target Start/End: Complemental strand, 15713933 - 15713474
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| ||||| |||| ||||||||| |||||| ||| |||| ||| |||||||| |||||||||||| |||||| |||||| ||| ||||||||| |
|
|
T |
15713933 |
cgaacaacatccatgacagcttttcttctaggctaccaaatccttgaagtgactttccggttaaagttaaaacatcgtcactaaaatgacacttcagttc |
15713834 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
||| || ||||||||||||| |||||| ||||||||| || | | ||||||||| ||||||| ||| |||||| |||||||||||||||| ||| || |
|
|
T |
15713833 |
atcaatgttatcagcaatctttttgtgcagttcctctagaatgcttccagtgtttttgatgtattttgccgcccacataagcttgtacttctcccctgac |
15713734 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccc |
307 |
Q |
|
|
| |||| || |||||||||||||||| |||||||| | |||||| |||| ||| | | || | ||||| | |||||| | || |||||||| |
|
|
T |
15713733 |
tttagatttgtattgtcatgatggatagggcctattgaaaccaacttaggtgcgtaatgcatctcataatttttactttttctgagatagcctggcaccc |
15713634 |
T |
 |
Q |
308 |
tttgtatc-ttggtcgtgaattttggggtgtttgctttg---------aattttgtaactcgacaaatttttctttaa---tagtttggggtgccatcat |
394 |
Q |
|
|
|||||||| ||||||||||| |||||||||||||||||| || |||||| ||| |||| ||||| || || ||||||| | ||||||||| |
|
|
T |
15713633 |
tttgtatctttggtcgtgaactttggggtgtttgctttgtatttatgtaactttgtagctccacaatttttttttcaagggtagtttgcgatgccatcat |
15713534 |
T |
 |
Q |
395 |
tcattcaatattctaatggttgagagatattgatcttgcaaagttacgaaattatgaatc |
454 |
Q |
|
|
||||||| ||| | ||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
T |
15713533 |
tcattcattataatcatggttgagggatattgatcttgcaaagtcacgaaattatgaatc |
15713474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 8 - 454
Target Start/End: Complemental strand, 21681960 - 21681500
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| ||||| || ||||||||||||||||||||| ||||||||||||||| || |||||||||||| ||||||||||||| | ||||||| ||| |
|
|
T |
21681960 |
cgaacaacatccatgataacttttcttcaaggctatgatagccttcaagagactcgccggttaaagttaaaacatcgtcgctaaaatggcccttcaattc |
21681861 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
||| || ||||||||||| | ||||| ||| |||| | || | | ||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |
|
|
T |
21681860 |
atcaatgttatcagcaatttttttgtatagatccttttgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaac |
21681761 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccc |
307 |
Q |
|
|
| ||||||| || |||||||||||||||||||||||| |||||||| |||| | || | || |||| | ||| || || |||||||| |
|
|
T |
21681760 |
tttagatctgtattgccatgatggataggacctattgacacaaacttggggctgtaatgctccttaaattttgttctatttttgacataccgtggcaccc |
21681661 |
T |
 |
Q |
308 |
tttgtatc-ttggtcgtgaattttggggtgtttgctttgaat---------tttgtaactcgacaaatttttctttaa---tagtttggggtgccatcat |
394 |
Q |
|
|
|||||||| ||||||||||||||||||||||||| |||| || |||||| ||| |||| ||||||| || ||||||||| || |||||| |
|
|
T |
21681660 |
tttgtatctttggtcgtgaattttggggtgtttgatttgtatctatgtatatttgtagctccacaatattttcttcaagggtagtttgggatgacatcat |
21681561 |
T |
 |
Q |
395 |
tcattcaatattctaatggttgagagatattgatcttgcaaagtt-acgaaattatgaatc |
454 |
Q |
|
|
||||||||| | ||||||||||| ||||||||||| |||| || |||||||||| |||| |
|
|
T |
21681560 |
tcattcaatgtaataatggttgaggaatattgatctttcaaacttaacgaaattataaatc |
21681500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 8 - 259
Target Start/End: Complemental strand, 21623503 - 21623252
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| |||||||||| |||||||| || |||| ||||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||| |
|
|
T |
21623503 |
cgaacaacatccacgacagcttttctttaatgctaccaaagccttcaagagactttccggttaaagttaaaacatcgtcactaaaatgacccttcagttc |
21623404 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcc-tctgga-ttaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctccta |
205 |
Q |
|
|
||| || ||||||||||||| ||||| | ||| |||| | || || ||||||| ||||||| |||||||||| ||||||||||||||||||||| |
|
|
T |
21623403 |
atcaatattatcagcaatcttgttgtgcatatccttctgaacttttctg--gtgtttttgatgtattttgctgcccacataagcttgtacttctctccta |
21623306 |
T |
 |
Q |
206 |
acatcagatctgatctgtcatgatggataggacctattgacaacaacttgggtg |
259 |
Q |
|
|
|| |||||| || || |||||||||||||||||||||||| ||||||||||| |
|
|
T |
21623305 |
acttcagatttgtattgccatgatggataggacctattgacaccaacttgggtg |
21623252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 16 - 280
Target Start/End: Complemental strand, 21745834 - 21745570
Alignment:
Q |
16 |
atccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttcatcgattt |
115 |
Q |
|
|
|||||||||| |||||||||||||| | |||||||| |||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| || | |
|
|
T |
21745834 |
atccacgacagcttttcttcaaggcattcaaagccttgaagagaatttccagttaaagttaaaacatcgtcgctaaaacgacccttcagttcatcaatgt |
21745735 |
T |
 |
Q |
116 |
tatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaacatcagatc |
215 |
Q |
|
|
||||| |||||| |||||| || || | |||||| | | || || || | ||||| |||||||||| ||||||| |||| |||||| | | |||| |
|
|
T |
21745734 |
tatcaacaatctttttgtgcagatcgtgtggattgtggcctgtattctcgaggtattttgctgcccacataagcttatactcttctcctgtctttagatt |
21745635 |
T |
 |
Q |
216 |
tgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtacttccccaaatttg |
280 |
Q |
|
|
|| ||||||||||||||||||||| ||||| ||||||||||| ||| | |||| | ||||||| |
|
|
T |
21745634 |
tggattgtcatgatggataggacctaatgacaccaacttgggtgagtaatgcttctcaaaatttg |
21745570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 21792321 - 21792084
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||||||||| |||| ||||||||| |||||| |||||| ||||||||||| | |||||||||||| ||| |||||||||||| ||||||| |
|
|
T |
21792321 |
cgaacaatatccatgacagcttttcttcgaggctaccaaagccgtcaagagacttgcgggttaaagttaaaacatcatcgctaaaacgatccttcagcgt |
21792222 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaac |
207 |
Q |
|
|
||| || ||||| ||||||| |||||| || || | || | | |||| |||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
21792221 |
atcaatgttatcggcaatctttttgtgcagatctttcagaatgctttcagtttttttgatgtattctgctgcccacataagcttgtacttctctcctaac |
21792122 |
T |
 |
Q |
208 |
atcagatctgatctgtcatgatggataggacctattga |
245 |
Q |
|
|
|||||||| ||| |||||||||| ||||||||||| |
|
|
T |
21792121 |
tccagatctgtactgccatgatggatgggacctattga |
21792084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 10 - 252
Target Start/End: Complemental strand, 21689721 - 21689479
Alignment:
Q |
10 |
aacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttcat |
109 |
Q |
|
|
||||| |||||||| | |||||||||||| |||| ||||||||| ||||| ||||| | || ||||||| |||||| |||| |||||||||||| || |
|
|
T |
21689721 |
aacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttccggtcaatgttaaaacatcgtcatcaaaatgacccttcagtttat |
21689622 |
T |
 |
Q |
110 |
cgattttatcagcaatctgtttgtgtag-ttcctctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaaca |
208 |
Q |
|
|
| || |||||| |||| | ||||||||| | ||||| || | | ||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |
|
|
T |
21689621 |
caatgttatcaacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaact |
21689523 |
T |
 |
Q |
209 |
tcagatctgatctgtcatgatggataggacctattgacaacaac |
252 |
Q |
|
|
| ||| | || ||||||||||||||||| |||||| |||| |
|
|
T |
21689522 |
ttagagatttattgccatgatggataggaccttttgacatcaac |
21689479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 336 - 429
Target Start/End: Complemental strand, 21741087 - 21740994
Alignment:
Q |
336 |
gtttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaatattctaatggttgagagatattgatc |
429 |
Q |
|
|
||||||||| | ||||||| ||| |||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |
|
|
T |
21741087 |
gtttgctttaatttttgtagctccacaattttttctttaatagtttgggatgccatcattcattcaatataataatggttgaggaatattgatc |
21740994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 201; Significance: 1e-109; HSPs: 3)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 142 - 445
Target Start/End: Complemental strand, 25486 - 25182
Alignment:
Q |
142 |
tctggattaagtgcagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaacatcagatctgatctgtcatgatggataggaccta |
241 |
Q |
|
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| |
|
|
T |
25486 |
tctggattaagtggagtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaacttcagatttttattgtcatgatggataggaccta |
25387 |
T |
 |
Q |
242 |
ttgacaacaacttgggtgtgtagtacttccccaaatttgacatctttctgcggtaatatggcaccctttgtatcttgg-tcgtgaattttggggtgtttg |
340 |
Q |
|
|
|||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||| |
|
|
T |
25386 |
ttgacaccaacttgggtttgtagtacttcctcaaatttggtatctttctgcggtaatatgccaccctttgtatcttgggtggtgaattttggggtgtttg |
25287 |
T |
 |
Q |
341 |
ctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaatattctaatggttgagagatattgatcttgcaaagtta |
440 |
Q |
|
|
|||||| ||||||| ||| ||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
T |
25286 |
ctttgatttttgtagctcctcaattttttctttaagagtttgggctgccatcattcattcaatacactaatggttgagggatattgatcttgcaaagtta |
25187 |
T |
 |
Q |
441 |
cgaaa |
445 |
Q |
|
|
||||| |
|
|
T |
25186 |
cgaaa |
25182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 430
Target Start/End: Complemental strand, 34514 - 34421
Alignment:
Q |
337 |
tttgctttgaattttgtaactcgacaaatttttctttaatagtttggggtgccatcattcattcaatattctaatggttgagagatattgatct |
430 |
Q |
|
|
|||||||||| ||||||| || |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| || |||||||| |
|
|
T |
34514 |
tttgctttgatttttgtagttccacaaatttttctttaatagtttcggatgccatcattcattcaatatgataatggttgagggaaattgatct |
34421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 25683 - 25526
Alignment:
Q |
8 |
cgaacaatatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccacttaaagttaaaatatcgtcgctaaaacgacccttcagttc |
107 |
Q |
|
|
||||||| ||| |||||| ||||||||||||| || ||||||||||||||||||| | |||||||||||| ||| ||||||||| ||||||||| | |
|
|
T |
25683 |
cgaacaacatcaacgacagcttttcttcaagggtaccaaagccttcaagagactttttagttaaagttaaaacatcctcgctaaaatgacccttcaaatt |
25584 |
T |
 |
Q |
108 |
atcgattttatcagcaatctgtttgtgtagttcctctggattaagtgcagtgttttct |
165 |
Q |
|
|
|| ||| | ||| |||||| ||||| ||||| ||||| ||||||||| ||||||| |
|
|
T |
25583 |
attgatgtcttcatcaatctttttgtatagtttctctgctttaagtgcaaagttttct |
25526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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