View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0673-Insertion-17 (Length: 89)

Name: NF0673-Insertion-17
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0673-Insertion-17
NF0673-Insertion-17
[»] chr4 (1 HSPs)
chr4 (8-89)||(43122545-43122626)


Alignment Details
Target: chr4 (Bit Score: 74; Significance: 1e-34; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-34
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 43122545 - 43122626
Alignment:
Q  8 ttctgatcctaaaaacttaattccttctccatcgtcacaacctcacaccttcaattttcgttttttcatcagttttctcact 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  43122545 ttctgatcctaaaaacttaattccttctccatcgtcacaacctcacaccttcagttttcgtttgttcatcagttttctcact 43122626  T

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