View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0673-Insertion-3 (Length: 896)

Name: NF0673-Insertion-3
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0673-Insertion-3
NF0673-Insertion-3
[»] chr7 (48 HSPs)
chr7 (528-888)||(22680681-22681050)
chr7 (236-325)||(22681042-22681131)
chr7 (161-250)||(22681147-22681236)
chr7 (325-429)||(9559010-9559114)
chr7 (323-423)||(44647985-44648085)
chr7 (317-429)||(4888482-4888594)
chr7 (325-429)||(21151167-21151271)
chr7 (332-429)||(47226039-47226134)
chr7 (326-421)||(45260384-45260479)
chr7 (324-422)||(12139349-12139447)
chr7 (336-429)||(7362583-7362676)
chr7 (324-429)||(16366533-16366638)
chr7 (324-429)||(18198271-18198376)
chr7 (321-423)||(33450527-33450630)
chr7 (333-429)||(25084690-25084788)
chr7 (333-419)||(989154-989239)
chr7 (332-423)||(47500245-47500337)
chr7 (332-395)||(47271111-47271173)
chr7 (726-840)||(23070216-23070329)
chr7 (333-417)||(34985909-34985994)
chr7 (364-429)||(35737128-35737193)
chr7 (476-527)||(12139245-12139296)
chr7 (726-846)||(31860280-31860399)
chr7 (706-846)||(40019450-40019588)
chr7 (796-845)||(2256488-2256537)
chr7 (364-429)||(47799895-47799960)
chr7 (476-527)||(21151069-21151120)
chr7 (336-423)||(39855781-39855867)
chr7 (476-514)||(7362498-7362536)
chr7 (476-514)||(16366448-16366486)
chr7 (786-848)||(25240271-25240333)
chr7 (343-429)||(32915971-32916056)
chr7 (337-394)||(33608845-33608901)
chr7 (476-525)||(47226180-47226229)
chr7 (333-416)||(29631076-29631156)
chr7 (786-846)||(31245285-31245345)
chr7 (476-519)||(18198181-18198224)
chr7 (371-421)||(19027685-19027736)
chr7 (371-421)||(20726900-20726951)
chr7 (374-429)||(46802336-46802391)
chr7 (364-421)||(14696752-14696810)
chr7 (481-519)||(44647890-44647928)
chr7 (476-510)||(45260534-45260568)
chr7 (364-429)||(19889029-19889094)
chr7 (726-777)||(46302898-46302949)
chr7 (364-421)||(30102516-30102574)
chr7 (364-429)||(30588550-30588615)
chr7 (364-408)||(32520324-32520369)
[»] chr5 (39 HSPs)
chr5 (325-429)||(35660565-35660669)
chr5 (323-429)||(37266746-37266852)
chr5 (325-429)||(18625377-18625481)
chr5 (332-429)||(11775808-11775905)
chr5 (324-429)||(13032133-13032238)
chr5 (333-429)||(4895699-4895795)
chr5 (325-429)||(32129573-32129677)
chr5 (323-429)||(14349818-14349924)
chr5 (323-429)||(40753116-40753222)
chr5 (325-429)||(34827207-34827311)
chr5 (325-429)||(39902430-39902534)
chr5 (684-846)||(42641112-42641273)
chr5 (327-429)||(43309123-43309225)
chr5 (341-429)||(8440943-8441031)
chr5 (476-526)||(4592719-4592769)
chr5 (332-429)||(29341010-29341106)
chr5 (476-527)||(13032036-13032087)
chr5 (786-848)||(7736296-7736358)
chr5 (364-421)||(36290625-36290682)
chr5 (364-429)||(41660121-41660186)
chr5 (476-519)||(11775717-11775760)
chr5 (476-527)||(32129724-32129775)
chr5 (476-519)||(39902340-39902383)
chr5 (332-401)||(9460599-9460667)
chr5 (332-396)||(18653409-18653472)
chr5 (786-846)||(25731215-25731275)
chr5 (332-427)||(3057433-3057527)
chr5 (476-527)||(4895842-4895893)
chr5 (476-527)||(37266648-37266699)
chr5 (476-527)||(40753269-40753320)
chr5 (352-413)||(1475638-1475699)
chr5 (786-846)||(1042055-1042115)
chr5 (365-429)||(27428877-27428941)
chr5 (349-420)||(3057135-3057205)
chr5 (476-527)||(8441078-8441129)
chr5 (786-845)||(14157050-14157109)
chr5 (479-514)||(14349734-14349769)
chr5 (476-519)||(35660716-35660759)
chr5 (478-527)||(1475747-1475796)
[»] chr6 (30 HSPs)
chr6 (324-429)||(4804463-4804568)
chr6 (332-429)||(12412652-12412749)
chr6 (325-422)||(13089705-13089802)
chr6 (322-429)||(21159322-21159429)
chr6 (324-429)||(17944177-17944282)
chr6 (326-429)||(1249105-1249206)
chr6 (325-429)||(7162099-7162203)
chr6 (325-413)||(32737888-32737976)
chr6 (332-429)||(27826553-27826650)
chr6 (332-421)||(227526-227616)
chr6 (332-413)||(1516170-1516250)
chr6 (332-413)||(1518259-1518339)
chr6 (364-429)||(2142288-2142353)
chr6 (364-429)||(24484894-24484959)
chr6 (726-848)||(29694300-29694421)
chr6 (477-532)||(29698075-29698130)
chr6 (476-529)||(4804363-4804416)
chr6 (332-412)||(1515505-1515584)
chr6 (333-428)||(7215816-7215911)
chr6 (476-527)||(32737791-32737842)
chr6 (479-528)||(1249256-1249305)
chr6 (337-394)||(28696624-28696680)
chr6 (476-528)||(7162000-7162052)
chr6 (332-423)||(13888485-13888577)
chr6 (337-393)||(30460875-30460930)
chr6 (364-421)||(7545660-7545718)
chr6 (796-840)||(1407390-1407434)
chr6 (333-389)||(29229149-29229204)
chr6 (323-429)||(2800565-2800671)
chr6 (364-421)||(7098190-7098248)
[»] chr4 (74 HSPs)
chr4 (324-429)||(56558294-56558399)
chr4 (325-429)||(19901874-19901978)
chr4 (325-429)||(33247086-33247190)
chr4 (326-429)||(34778436-34778539)
chr4 (325-423)||(3952126-3952224)
chr4 (337-427)||(30567918-30568008)
chr4 (325-413)||(12153185-12153273)
chr4 (325-429)||(23610657-23610761)
chr4 (324-429)||(5763117-5763222)
chr4 (325-429)||(5416422-5416525)
chr4 (325-423)||(12312431-12312530)
chr4 (325-423)||(18206996-18207094)
chr4 (325-423)||(24073637-24073735)
chr4 (325-413)||(52018794-52018882)
chr4 (324-429)||(38079675-38079780)
chr4 (325-417)||(33262508-33262600)
chr4 (702-846)||(37626715-37626858)
chr4 (325-429)||(39862532-39862636)
chr4 (332-423)||(47922329-47922421)
chr4 (325-393)||(33524313-33524381)
chr4 (726-842)||(41260000-41260115)
chr4 (476-530)||(17080747-17080801)
chr4 (364-429)||(56269071-56269136)
chr4 (476-532)||(33247235-33247291)
chr4 (476-527)||(12153088-12153139)
chr4 (476-527)||(34778338-34778389)
chr4 (476-527)||(52018700-52018751)
chr4 (322-408)||(23474147-23474232)
chr4 (342-429)||(47922052-47922135)
chr4 (364-413)||(5361457-5361506)
chr4 (479-527)||(5416577-5416625)
chr4 (796-848)||(14124197-14124249)
chr4 (332-423)||(1871298-1871388)
chr4 (476-527)||(12241515-12241566)
chr4 (726-842)||(52837943-52838058)
chr4 (791-846)||(53654292-53654347)
chr4 (364-429)||(17493017-17493083)
chr4 (786-844)||(21865189-21865247)
chr4 (786-844)||(21921050-21921108)
chr4 (334-419)||(34927510-34927596)
chr4 (364-429)||(1015849-1015914)
chr4 (364-429)||(5524462-5524527)
chr4 (476-529)||(19902025-19902078)
chr4 (364-429)||(36688183-36688248)
chr4 (364-413)||(47834595-47834644)
chr4 (786-847)||(48497413-48497474)
chr4 (479-527)||(18207150-18207198)
chr4 (365-429)||(56453816-56453880)
chr4 (476-527)||(5763269-5763320)
chr4 (476-519)||(23610567-23610610)
chr4 (476-527)||(47922182-47922233)
chr4 (476-527)||(56558196-56558247)
chr4 (476-514)||(12312610-12312648)
chr4 (786-848)||(33395330-33395392)
chr4 (332-429)||(36532640-36532736)
chr4 (364-429)||(37002246-37002311)
chr4 (364-429)||(42010132-42010197)
chr4 (476-508)||(3952277-3952309)
chr4 (352-415)||(26428997-26429061)
chr4 (786-846)||(35827809-35827869)
chr4 (786-865)||(37858183-37858262)
chr4 (796-840)||(48582187-48582231)
chr4 (332-420)||(13493296-13493385)
chr4 (476-519)||(24073542-24073585)
chr4 (332-395)||(33841768-33841830)
chr4 (476-519)||(38079827-38079870)
chr4 (476-527)||(39862434-39862485)
chr4 (787-846)||(47519290-47519349)
chr4 (364-421)||(32146525-32146583)
chr4 (364-421)||(46238989-46239047)
chr4 (332-426)||(48914482-48914575)
chr4 (364-421)||(53526111-53526169)
chr4 (364-421)||(55160365-55160423)
chr4 (371-421)||(25219018-25219070)
[»] scaffold0035 (2 HSPs)
scaffold0035 (323-423)||(16351-16451)
scaffold0035 (476-527)||(16504-16555)
[»] chr2 (38 HSPs)
chr2 (325-429)||(35316840-35316944)
chr2 (332-429)||(13238696-13238793)
chr2 (325-429)||(28564907-28565011)
chr2 (323-421)||(23259441-23259539)
chr2 (325-413)||(45625035-45625123)
chr2 (325-396)||(11864917-11864988)
chr2 (332-429)||(2063368-2063465)
chr2 (796-875)||(31915111-31915190)
chr2 (786-846)||(31921235-31921295)
chr2 (787-846)||(8033327-8033386)
chr2 (786-846)||(35005218-35005278)
chr2 (332-407)||(40640706-40640782)
chr2 (332-410)||(38824059-38824138)
chr2 (364-429)||(375008-375073)
chr2 (476-528)||(10877618-10877670)
chr2 (476-519)||(28564816-28564859)
chr2 (476-527)||(35316742-35316793)
chr2 (371-413)||(3354782-3354824)
chr2 (364-429)||(8988870-8988935)
chr2 (364-429)||(23459841-23459906)
chr2 (336-396)||(36929764-36929823)
chr2 (786-846)||(38373391-38373451)
chr2 (476-528)||(41983446-41983498)
chr2 (333-424)||(4446860-4446951)
chr2 (476-519)||(39465700-39465743)
chr2 (364-421)||(13780521-13780579)
chr2 (349-429)||(21454476-21454554)
chr2 (786-850)||(31598095-31598158)
chr2 (332-428)||(36758825-36758920)
chr2 (476-519)||(13238606-13238649)
chr2 (786-845)||(18967758-18967817)
chr2 (337-427)||(15709785-15709874)
chr2 (330-396)||(22061431-22061496)
chr2 (371-421)||(30709133-30709183)
chr2 (364-421)||(40254144-40254202)
chr2 (786-855)||(12800772-12800841)
chr2 (332-365)||(32009938-32009971)
chr2 (376-413)||(39465789-39465826)
[»] chr1 (33 HSPs)
chr1 (325-429)||(50484401-50484505)
chr1 (323-421)||(50294017-50294115)
chr1 (322-423)||(48327107-48327208)
chr1 (325-429)||(12151782-12151886)
chr1 (332-429)||(40328293-40328387)
chr1 (324-396)||(12380832-12380904)
chr1 (324-396)||(12384899-12384971)
chr1 (325-410)||(45978039-45978124)
chr1 (325-429)||(7840635-7840739)
chr1 (333-404)||(23861916-23861987)
chr1 (786-848)||(26701584-26701646)
chr1 (332-419)||(18976267-18976355)
chr1 (476-533)||(45977933-45977990)
chr1 (786-846)||(2193324-2193384)
chr1 (340-428)||(24977256-24977343)
chr1 (476-527)||(12381017-12381068)
chr1 (476-527)||(12385084-12385135)
chr1 (333-419)||(32361271-32361357)
chr1 (684-847)||(44603625-44603787)
chr1 (791-846)||(8772461-8772516)
chr1 (786-847)||(4489326-4489387)
chr1 (341-394)||(30860741-30860794)
chr1 (364-421)||(52280034-52280091)
chr1 (332-392)||(1228503-1228563)
chr1 (364-420)||(30077639-30077695)
chr1 (476-528)||(50484302-50484354)
chr1 (337-428)||(39426226-39426317)
chr1 (476-512)||(12151699-12151735)
chr1 (479-527)||(23862066-23862114)
chr1 (476-527)||(7841817-7841868)
chr1 (364-417)||(18107316-18107370)
chr1 (812-845)||(8376326-8376359)
chr1 (786-839)||(15330851-15330904)
[»] scaffold0012 (2 HSPs)
scaffold0012 (324-423)||(208084-208183)
scaffold0012 (476-527)||(207980-208031)
[»] chr8 (38 HSPs)
chr8 (322-429)||(28069734-28069841)
chr8 (325-429)||(30426625-30426729)
chr8 (325-429)||(36991371-36991475)
chr8 (325-429)||(10672470-10672572)
chr8 (325-429)||(40695204-40695307)
chr8 (324-429)||(10652572-10652677)
chr8 (324-386)||(5033310-5033372)
chr8 (332-429)||(44859132-44859227)
chr8 (333-429)||(41511277-41511373)
chr8 (332-420)||(45113294-45113383)
chr8 (332-417)||(37966407-37966491)
chr8 (786-861)||(29374568-29374642)
chr8 (332-421)||(6014217-6014307)
chr8 (360-413)||(12177572-12177625)
chr8 (360-413)||(12422000-12422053)
chr8 (364-429)||(26749543-26749608)
chr8 (361-429)||(24102031-24102099)
chr8 (342-398)||(28318869-28318925)
chr8 (476-527)||(30426776-30426827)
chr8 (476-527)||(36991273-36991324)
chr8 (726-841)||(41168624-41168739)
chr8 (476-527)||(41511179-41511230)
chr8 (374-423)||(34612585-34612634)
chr8 (786-846)||(12956245-12956305)
chr8 (802-846)||(22488793-22488837)
chr8 (476-519)||(5033031-5033074)
chr8 (476-519)||(10652725-10652768)
chr8 (378-420)||(5033108-5033150)
chr8 (364-421)||(17867654-17867712)
chr8 (476-514)||(28319009-28319047)
chr8 (730-829)||(44167166-44167264)
chr8 (482-527)||(12177677-12177722)
chr8 (482-527)||(12422105-12422150)
chr8 (476-527)||(10672619-10672670)
chr8 (364-429)||(1937149-1937215)
chr8 (337-427)||(18689508-18689597)
chr8 (726-772)||(22488872-22488918)
chr8 (349-427)||(42761730-42761808)
[»] chr3 (34 HSPs)
chr3 (325-429)||(43719903-43720007)
chr3 (333-429)||(2229998-2230094)
chr3 (325-429)||(19830387-19830491)
chr3 (333-421)||(46167416-46167504)
chr3 (325-428)||(24754673-24754776)
chr3 (325-428)||(24763670-24763773)
chr3 (325-421)||(27033674-27033770)
chr3 (325-417)||(34373858-34373950)
chr3 (327-423)||(40851795-40851891)
chr3 (332-423)||(48084840-48084932)
chr3 (343-429)||(34373559-34373645)
chr3 (727-846)||(54153867-54153985)
chr3 (727-845)||(44765271-44765388)
chr3 (786-846)||(9248398-9248458)
chr3 (325-377)||(24647905-24647957)
chr3 (364-429)||(31523663-31523728)
chr3 (349-429)||(12402981-12403061)
chr3 (342-429)||(550790-550876)
chr3 (476-527)||(40851690-40851741)
chr3 (476-527)||(43720054-43720105)
chr3 (476-514)||(34373692-34373730)
chr3 (341-394)||(566746-566798)
chr3 (364-413)||(27959121-27959170)
chr3 (364-429)||(42613095-42613160)
chr3 (364-429)||(49679265-49679330)
chr3 (702-846)||(4195303-4195446)
chr3 (332-413)||(3009253-3009332)
chr3 (786-846)||(32375277-32375337)
chr3 (786-846)||(47510744-47510804)
chr3 (476-519)||(550923-550966)
chr3 (476-527)||(2229900-2229951)
chr3 (786-829)||(25118646-25118689)
chr3 (476-514)||(46167323-46167361)
chr3 (476-509)||(19830539-19830572)
[»] scaffold0008 (2 HSPs)
scaffold0008 (325-429)||(9157-9261)
scaffold0008 (476-519)||(9305-9348)
[»] scaffold0250 (2 HSPs)
scaffold0250 (325-429)||(7162-7270)
scaffold0250 (476-527)||(7064-7115)
[»] scaffold0006 (2 HSPs)
scaffold0006 (332-410)||(73820-73898)
scaffold0006 (476-514)||(73947-73985)
[»] scaffold0456 (1 HSPs)
scaffold0456 (325-413)||(13710-13799)
[»] scaffold0009 (1 HSPs)
scaffold0009 (332-423)||(6398-6489)
[»] scaffold0126 (1 HSPs)
scaffold0126 (332-428)||(22406-22501)
[»] scaffold0007 (1 HSPs)
scaffold0007 (791-846)||(246574-246629)
[»] scaffold0171 (1 HSPs)
scaffold0171 (374-429)||(17311-17366)
[»] scaffold0664 (1 HSPs)
scaffold0664 (364-421)||(4695-4753)
[»] scaffold0062 (1 HSPs)
scaffold0062 (337-427)||(58697-58786)


Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 528 - 888
Target Start/End: Complemental strand, 22681050 - 22680681
Alignment:
Q  528 cattattggcatgactataaacaacgaaggaagactcaaatagtggccacgtagtcatgtaattactatgccttgttcaatgtgta---------tagta 618  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||    
T  22681050 cattattggtatgactataaacaaagaaggaagactcaaatagtggccacgtagtcatgtaattactatgccttgttcaatgtgtagcctataagtagta 22680951  T
Q  619 agggcatcgaccaccatctatagataggtactccatttgggattaaaaatagtggatgactatttataattataataagagtgttgctaaccagtgtctt 718  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||||  |||||| |    
T  22680950 agggcatcgaccaccatctatagataggtactccatttggaattaaaaatagtggatgacgatttataattataagaagggtgttgctaattagtgtcct 22680851  T
Q  719 gaaagcgatggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccacttttcgatgcaaa 818  Q
    ||| ||||||||||| ||| ||||||| ||||||||||| ||| ||||| |||||||||        |||| ||||||||||||||||||||||||||||    
T  22680850 gaaggcgatggttaaagatcctattaatataaacattgtcttgaaaataaaagtcttta-tttttttcttagcaatcattacaccacttttcgatgcaaa 22680752  T
Q  819 cttacttatttaaatactttaaccaatgtctccaaggataatgatta-cattctccttataagaatgaata 888  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  22680751 cttacttatttaagtactttaaccaatgtctctaaggataatgattagcattctccttataagaatgaata 22680681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 22681131 - 22681042
Alignment:
Q  236 ttcaaaaaaggacttgttcttggacccagacatgatgatgtgtccttaagcaaagtaacaacacatgtgctgaagattccacattattgg 325  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22681131 ttcaaaaaaggacttgttcttggacccagaaatgatgatgtgtccttaagcaaagtaacaacacatgtgctgaagattcgacattattgg 22681042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 22681236 - 22681147
Alignment:
Q  161 cattgttaaatgagaaaagaaacaatgactacaatccaattcttcaaccctattaagattaaatttggaacatacttcaaaaaaggactt 250  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22681236 cattgctaaatgagaaaagaaacaatgactacaatccaatgcttcaaccctattaagattaaatttggaacatacttcaaaaaaggactt 22681147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 9559010 - 9559114
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||     
T  9559010 gggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtc 9559109  T
Q  425 ccacc 429  Q
    |||||    
T  9559110 ccacc 9559114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 323 - 423
Target Start/End: Complemental strand, 44648085 - 44647985
Alignment:
Q  323 tggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtggg 422  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  44648085 tggggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtggg 44647986  T
Q  423 t 423  Q
    |    
T  44647985 t 44647985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 317 - 429
Target Start/End: Complemental strand, 4888594 - 4888482
Alignment:
Q  317 cattattggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccacta 416  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||| |||||||    
T  4888594 cattaatggggtgaagatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccacta 4888495  T
Q  417 agtgggttccacc 429  Q
    ||| ||| |||||    
T  4888494 agtaggtcccacc 4888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 21151271 - 21151167
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||| ||||||||||||||     
T  21151271 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtc 21151172  T
Q  425 ccacc 429  Q
    |||||    
T  21151171 ccacc 21151167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 332 - 429
Target Start/End: Original strand, 47226039 - 47226134
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||| |||||    
T  47226039 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaat--atggtgggtcccaccactaaatgggtcccacc 47226134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 326 - 421
Target Start/End: Original strand, 45260384 - 45260479
Alignment:
Q  326 ggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||    
T  45260384 ggtgaagatcctctccatttggcaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagattgtggatcctaccactaagtgg 45260479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 12139447 - 12139349
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtggg 422  Q
    ||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  12139447 ggggtgaagattctcttcatttggcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggg 12139349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 336 - 429
Target Start/End: Complemental strand, 7362676 - 7362583
Alignment:
Q  336 ctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccacc 7362583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 324 - 429
Target Start/End: Complemental strand, 16366638 - 16366533
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| ||| ||||||||||| ||    
T  16366638 ggggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgt 16366539  T
Q  424 tccacc 429  Q
     |||||    
T  16366538 cccacc 16366533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 324 - 429
Target Start/End: Complemental strand, 18198376 - 18198271
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||| ||||||||| |  |||||||||| ||    
T  18198376 ggggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgagt 18198277  T
Q  424 tccacc 429  Q
     |||||    
T  18198276 cccacc 18198271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 321 - 423
Target Start/End: Complemental strand, 33450630 - 33450527
Alignment:
Q  321 attggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagt 419  Q
    |||||||| | |||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  33450630 attggggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagt 33450531  T
Q  420 gggt 423  Q
    ||||    
T  33450530 gggt 33450527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 333 - 429
Target Start/End: Original strand, 25084690 - 25084788
Alignment:
Q  333 atcctctccatttggcaaaataaa--tggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||||||||| |||| |||  |  ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  25084690 atcctctccatttggaaaaaaaaaaataaagttttgtaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccacc 25084788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 333 - 419
Target Start/End: Complemental strand, 989239 - 989154
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagt 419  Q
    |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||||||||| || |||||||| ||||||||||    
T  989239 atcctctccatttgacaaattaaatggagttt-gcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagt 989154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 47500245 - 47500337
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||||||||||   ||||||||| |||||||| || |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  47500245 gatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 47500337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 332 - 395
Target Start/End: Original strand, 47271111 - 47271173
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaat 395  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  47271111 gatcctctccatttagcaaaataaatggag-tttgcaatttggagagagatagacacaaaaaat 47271173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 726 - 840
Target Start/End: Original strand, 23070216 - 23070329
Alignment:
Q  726 atggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccacttttcgatgcaaacttactt 825  Q
    ||||||||| |||| ||||| | |||| |||| |||||||||||||||||||        |||| |||| ||||||||||||||||||||||| ||||||    
T  23070216 atggttaagaattccattaatagaaactttgtcttggaaatacaagtctttactttttt-cttagcaatgattacaccacttttcgatgcaaatttactt 23070314  T
Q  826 atttaaatactttaa 840  Q
    |||| ||||||||||    
T  23070315 attttaatactttaa 23070329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 333 - 417
Target Start/End: Original strand, 34985909 - 34985994
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaa 417  Q
    |||||||| |||||  ||||||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  34985909 atcctctcaatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtcaaaccactaa 34985994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 35737193 - 35737128
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||| ||||| |||||| |||||    
T  35737193 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccatcactaggtgggtcccacc 35737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 12139296 - 12139245
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  12139296 ctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 12139245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 726 - 846
Target Start/End: Original strand, 31860280 - 31860399
Alignment:
Q  726 atggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccacttttcgatgcaaacttactt 825  Q
    |||||||| ||||||| |||   |||| |||| |||||||||||||||||||        ||||||||| ||||||||| |||||||||||||||||||     
T  31860280 atggttaaagattctaataatgaaaactttgtcttggaaatacaagtctttactttctt-cttatcaataattacaccatttttcgatgcaaacttactc 31860378  T
Q  826 atttaaatactttaaccaatg 846  Q
    |||| | ||||||||||||||    
T  31860379 attttagtactttaaccaatg 31860399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 706 - 846
Target Start/End: Original strand, 40019450 - 40019588
Alignment:
Q  706 taaccagtgtcttgaaagcgatggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccac 805  Q
    |||||| |||||| || || |||||||||||||| ||||| | |||| |||| |||||||||||||||||||        |||| |||| | |||| |||    
T  40019450 taaccaatgtcttaaatgcaatggttaaggattccattaataaaaactttgtcttggaaatacaagtcttta-cttttttcttagcaat-aatacatcac 40019547  T
Q  806 ttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    ||||| ||||||||||| |||||| ||||||||||||||||    
T  40019548 ttttcaatgcaaacttatttattttaatactttaaccaatg 40019588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 796 - 845
Target Start/End: Original strand, 2256488 - 2256537
Alignment:
Q  796 attacaccacttttcgatgcaaacttacttatttaaatactttaaccaat 845  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  2256488 attacaccacttttcgatgcaaacttacttattttaatacttcaaccaat 2256537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 47799895 - 47799960
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| || ||||||| | |||||||||||| |||||    
T  47799895 ttgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccacc 47799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 21151120 - 21151069
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  21151120 ctctccaaattgaagaaatggagaaacacataaatggagagaatcctaaccc 21151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 39855781 - 39855867
Alignment:
Q  336 ctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    |||| |||||| |||| |||||||||||| | || ||||||||||||||||||| |||| | ||||| ||||| ||||||||||||||    
T  39855781 ctcttcatttgacaaattaaatggagttt-gtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggt 39855867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 514
Target Start/End: Complemental strand, 7362536 - 7362498
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggag 514  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7362536 ctctccaaattgaagaaatggagaaacacataaatggag 7362498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 514
Target Start/End: Complemental strand, 16366486 - 16366448
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggag 514  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16366486 ctctccaaattgaagaaatggagaaacacataaatggag 16366448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 786 - 848
Target Start/End: Complemental strand, 25240333 - 25240271
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgtc 848  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||   |||||||| |||||||    
T  25240333 cttatcaatgattacaccactgttcgatgcaaacttacttattttcgtactttaatcaatgtc 25240271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 429
Target Start/End: Complemental strand, 32916056 - 32915971
Alignment:
Q  343 tttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||| |||||||||||||  | |||| ||| ||||||||||||||||||||||||| |||||||| |||| |||||| || |||||    
T  32916056 tttggtaaaataaatggaggat-gcaatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccacc 32915971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 33608845 - 33608901
Alignment:
Q  337 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaa 394  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  33608845 tctccatttggtaaaataaatggag-tttgcaatttggagagagataaacacaaaaaa 33608901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 476 - 525
Target Start/End: Original strand, 47226180 - 47226229
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaac 525  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  47226180 ctctccaaattgaagaaatagagaaacacataaatggagaggatcctaac 47226229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 416
Target Start/End: Complemental strand, 29631156 - 29631076
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccacta 416  Q
    ||||||||||||||| ||||||||||||| ||||||| |||   |||||||||||||||| ||| || |||||||| |||||||    
T  29631156 atcctctccatttggtaaaataaatggag-tttgcaatttg--aagagatagacacaaaacatagatagtgggtccaaccacta 29631076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 786 - 846
Target Start/End: Original strand, 31245285 - 31245345
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||| ||||||||| |||||||||||||||||||||||| | ||||| ||||||||    
T  31245285 cttagcaataattacaccatttttcgatgcaaacttacttattttagtacttcaaccaatg 31245345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 18198224 - 18198181
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  18198224 ctctacaaattgaagaaatggagaaacacataaatggagaggat 18198181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 19027685 - 19027736
Alignment:
Q  371 ttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagtgg 421  Q
    |||||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  19027685 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtgg 19027736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 20726951 - 20726900
Alignment:
Q  371 ttggagagagatagacacaaaaaa-taaatggtgggtcccaccactaagtgg 421  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  20726951 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtgg 20726900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 374 - 429
Target Start/End: Original strand, 46802336 - 46802391
Alignment:
Q  374 gagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||| |||||||| | ||||||||| |||||||||||||| |||||    
T  46802336 gagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccacc 46802391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 14696752 - 14696810
Alignment:
Q  364 ttgcaagttggagagagatagacac-aaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||| | ||||||||||    
T  14696752 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtgg 14696810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 519
Target Start/End: Complemental strand, 44647928 - 44647890
Alignment:
Q  481 caaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  44647928 caaattgaagaaatggagaaacacataaatggagaggat 44647890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 510
Target Start/End: Original strand, 45260534 - 45260568
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaat 510  Q
    |||||||||||||||||||||||||||||||||||    
T  45260534 ctctccaaattgaagaaatggagaaacacataaat 45260568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 19889029 - 19889094
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| || || ||||||||| ||||||||||| | |||||||| | ||||||||||||||||||    
T  19889029 ttgcaatttagaaagagatagatacaaaaaataagttgtgggtcctatcactaagtgggttccacc 19889094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 777
Target Start/End: Complemental strand, 46302949 - 46302898
Alignment:
Q  726 atggttaaggattctattaacataaacattgttttggaaatacaagtcttta 777  Q
    |||||||||||||| ||||| | ||| ||||| |||||||||||||||||||    
T  46302949 atggttaaggattccattaatagaaatattgtcttggaaatacaagtcttta 46302898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 30102574 - 30102516
Alignment:
Q  364 ttgcaagttggagagagatagac-acaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| |||||||||||||||| | ||||||||| |||||||||| | ||||||||||    
T  30102574 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtgg 30102516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 30588615 - 30588550
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||  ||||||||||||||||||||| ||  |||||| | |||||||||||| |||||    
T  30588615 ttgcaatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccacc 30588550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 32520324 - 32520369
Alignment:
Q  364 ttgcaagttggagagagatagacac-aaaaaataaatggtgggtcc 408  Q
    |||||| |||||||||||||||||| ||||||||| ||||||||||    
T  32520324 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcc 32520369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 2e-42; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 35660565 - 35660669
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||     
T  35660565 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtc 35660664  T
Q  425 ccacc 429  Q
    |||||    
T  35660665 ccacc 35660669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 323 - 429
Target Start/End: Complemental strand, 37266852 - 37266746
Alignment:
Q  323 tggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtggg 422  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  37266852 tggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtggg 37266753  T
Q  423 ttccacc 429  Q
    | |||||    
T  37266752 tcccacc 37266746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 18625377 - 18625481
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||     
T  18625377 gggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtc 18625476  T
Q  425 ccacc 429  Q
    |||||    
T  18625477 ccacc 18625481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 11775905 - 11775808
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccacc 11775808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 324 - 429
Target Start/End: Complemental strand, 13032238 - 13032133
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||| |||||    
T  13032238 ggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggt 13032139  T
Q  424 tccacc 429  Q
     |||||    
T  13032138 cccacc 13032133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 333 - 429
Target Start/End: Original strand, 4895699 - 4895795
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccacc 4895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 32129573 - 32129677
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||     
T  32129573 gggtgaagatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtc 32129672  T
Q  425 ccacc 429  Q
    |||||    
T  32129673 ccacc 32129677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 323 - 429
Target Start/End: Complemental strand, 14349924 - 14349818
Alignment:
Q  323 tggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtggg 422  Q
    |||||||| ||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  14349924 tggggtgaagatcctctctatttggtaaaataaatggagttttgtaagttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtggg 14349825  T
Q  423 ttccacc 429  Q
    | |||||    
T  14349824 tcccacc 14349818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 323 - 429
Target Start/End: Original strand, 40753116 - 40753222
Alignment:
Q  323 tggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtggg 422  Q
    |||||||| ||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  40753116 tggggtgaagatcctctctatttggcaaaataaataaagttttgcaagttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtggg 40753215  T
Q  423 ttccacc 429  Q
    | |||||    
T  40753216 tcccacc 40753222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 34827311 - 34827207
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||||||     
T  34827311 gggtgaagatcatctccatttagcaaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtc 34827212  T
Q  425 ccacc 429  Q
    |||||    
T  34827211 ccacc 34827207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 39902534 - 39902430
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||| |||||||| ||| ||    
T  39902534 gggtgaagttcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggatt 39902435  T
Q  425 ccacc 429  Q
    |||||    
T  39902434 ccacc 39902430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 684 - 846
Target Start/End: Complemental strand, 42641273 - 42641112
Alignment:
Q  684 ataattataataagagtgttgctaaccagtgtcttgaaagcgatggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnn 783  Q
    |||| |||| |||| || |||||||||||||||   ||  | || ||||||||||||||||| | |||| |||| ||| |||||||||||||||          
T  42641273 ataaatatattaagggttttgctaaccagtgtcacaaagacaatagttaaggattctattaatagaaactttgtcttgaaaatacaagtctttacttttt 42641174  T
Q  784 nncttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
      ||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  42641173 t-cttatcaatgattacaccatttttcgatgcaaacttacttattttagtactttaaccaatg 42641112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 327 - 429
Target Start/End: Complemental strand, 43309225 - 43309123
Alignment:
Q  327 gtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttcc 426  Q
    |||| ||||||||  |||||  ||||||||||||||||||||||||||||||||||||||| |||||||| || |||| ||  |||| ||| ||||||||    
T  43309225 gtgaagatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttcc 43309126  T
Q  427 acc 429  Q
    |||    
T  43309125 acc 43309123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 429
Target Start/End: Original strand, 8440943 - 8441031
Alignment:
Q  341 catttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| |||||| | |  ||||||||||| || |||||    
T  8440943 catttggcaaaataaatggagttttgcaagttggaggtagatagacaccaaaaatagatggtgcgacataccactaagtgtgtcccacc 8441031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 526
Target Start/End: Complemental strand, 4592769 - 4592719
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaacc 526  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4592769 ctctccaaattgaagaaatggagaaacacataaatggagaggattctaacc 4592719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 29341106 - 29341010
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||||| | |||||||||||| | |||| ||||||||||||||||||| |||||| || |||||||| || | ||||||||| |||||    
T  29341106 gatcctctccatttggtataataaatggagtat-gcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccacc 29341010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 13032087 - 13032036
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  13032087 ctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 13032036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 786 - 848
Target Start/End: Complemental strand, 7736358 - 7736296
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgtc 848  Q
    |||| |||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  7736358 cttagcaatcattacgccacttttcaatggaaacttacttatttaagtactttaaccaatgtc 7736296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 36290682 - 36290625
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  36290682 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgg 36290625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 41660186 - 41660121
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| || ||||| |||||| |||||    
T  41660186 ttgcaatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccacc 41660121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 11775760 - 11775717
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  11775760 ctctccaaattgaagaaatggagaaacacataaatggagaggat 11775717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 32129724 - 32129775
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  32129724 ctctccaaattgaagaaatggagaaacatataaatggagaggatcctaaccc 32129775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 39902383 - 39902340
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  39902383 ctctccaaattgaagaaatggagaaacacataaatggagaggat 39902340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 332 - 401
Target Start/End: Original strand, 9460599 - 9460667
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatgg 401  Q
    |||||||||||||||| ||||||||| |||| | |||| ||||||||||||||||||| | |||||||||    
T  9460599 gatcctctccatttggtaaaataaatagagtat-gcaatttggagagagatagacacatataataaatgg 9460667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 18653472 - 18653409
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaata 396  Q
    ||||||||| | ||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  18653472 gatcctctcaaattgtcaaaataaatggagttt-gcaatttgaagagagatagacacaaaaaata 18653409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 786 - 846
Target Start/End: Complemental strand, 25731275 - 25731215
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||| ||||||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  25731275 cttagcaataattacacaacttttctatgcaaacttacttattttagtactttaaccaatg 25731215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 332 - 427
Target Start/End: Complemental strand, 3057527 - 3057433
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttcca 427  Q
    |||||||||||||| | ||||||||| ||||||| ||| | ||||||||||||||| |||||| | ||| ||| ||| ||||| ||||| ||||||    
T  3057527 gatcctctccattttgtaaaataaatagagtttt-caattcggagagagatagacaaaaaaaaaagatgatggatcctaccacaaagtgagttcca 3057433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 4895842 - 4895893
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||||||||| ||||||| || |||| |||||||    
T  4895842 ctctccaaattgaagaaatggagaaacatataaatgaagaggatcctaaccc 4895893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 37266699 - 37266648
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||| |||||| ||||||||| |||| |||||||    
T  37266699 ctctccaaattgaagaaatggaaaaacacgtaaatggagaggatcctaaccc 37266648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 40753269 - 40753320
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||| |||||||    
T  40753269 ctctccaaattaaagaaatggagaagcacataaatggagaggatcctaaccc 40753320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 1475638 - 1475699
Alignment:
Q  352 ataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||||| |||||||||||| |||||| ||||| ||||||||||  | |||||||||||||    
T  1475638 ataaatggtgttttgcaagtttgagagaaatagatacaaaaaatagctagtgggtcccacca 1475699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 786 - 846
Target Start/End: Original strand, 1042055 - 1042115
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||| ||||||||| |||||||||||||||||||| ||| | ||||||||| ||||    
T  1042055 cttagcaattattacaccaattttcgatgcaaacttactttttttagtactttaactaatg 1042115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 365 - 429
Target Start/End: Original strand, 27428877 - 27428941
Alignment:
Q  365 tgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||| ||||| |||||||||||||||||||| ||||||  ||| |||| |||||| ||||||||    
T  27428877 tgcaatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccacc 27428941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 420
Target Start/End: Original strand, 3057135 - 3057205
Alignment:
Q  349 aaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtg 420  Q
    |||||||||||| ||| |||| ||||| ||||||| |||||||||||| ||||||| ||| |||| ||||||    
T  3057135 aaaataaatggaattt-gcaatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtg 3057205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 8441078 - 8441129
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||| |||| ||||||||||||||||||||  ||| |||||||    
T  8441078 ctctccaaattgatgaaacggagaaacacataaatggagatgatcctaaccc 8441129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 786 - 845
Target Start/End: Original strand, 14157050 - 14157109
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaat 845  Q
    ||||||||| |||||| ||||| | ||||||||||||||||||| |  ||||||||||||    
T  14157050 cttatcaataattacatcacttattgatgcaaacttacttattttacaactttaaccaat 14157109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 514
Target Start/End: Complemental strand, 14349769 - 14349734
Alignment:
Q  479 tccaaattgaagaaatggagaaacacataaatggag 514  Q
    |||||||| |||||||||||||||||||||||||||    
T  14349769 tccaaattaaagaaatggagaaacacataaatggag 14349734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 35660716 - 35660759
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||    
T  35660716 ctctccaaattgaagaaacggagaaacacataaatagagaggat 35660759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 527
Target Start/End: Original strand, 1475747 - 1475796
Alignment:
Q  478 ctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||| | ||||||||||||| || |||| |||||||    
T  1475747 ctccaaattgaagaaatgaaaaaacacataaatgaagaggatcctaaccc 1475796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 1e-40; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 324 - 429
Target Start/End: Complemental strand, 4804568 - 4804463
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  4804568 ggggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggt 4804469  T
Q  424 tccacc 429  Q
     |||||    
T  4804468 cccacc 4804463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 12412749 - 12412652
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  12412749 gatcttctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccacc 12412652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 325 - 422
Target Start/End: Original strand, 13089705 - 13089802
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtggg 422  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  13089705 gggtgaagatcctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaatatagatggtgggtcctaccactaagtggg 13089802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 322 - 429
Target Start/End: Original strand, 21159322 - 21159429
Alignment:
Q  322 ttggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    ||||||||| |||||||||||||||  |||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  21159322 ttggggtgaagatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgg 21159421  T
Q  422 gttccacc 429  Q
    || |||||    
T  21159422 gtcccacc 21159429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 324 - 429
Target Start/End: Complemental strand, 17944282 - 17944177
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||    
T  17944282 ggggtgaagatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggt 17944183  T
Q  424 tccacc 429  Q
     |||||    
T  17944182 cccacc 17944177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 326 - 429
Target Start/End: Original strand, 1249105 - 1249206
Alignment:
Q  326 ggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttc 425  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||| ||||||||||| |||||||||||||| |    
T  1249105 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagacag--acaaaaaatagatggtgggtcctaccactaagtgggtcc 1249202  T
Q  426 cacc 429  Q
    ||||    
T  1249203 cacc 1249206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 7162203 - 7162099
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || |||||||||||     
T  7162203 gggtgaagatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtc 7162104  T
Q  425 ccacc 429  Q
    |||||    
T  7162103 ccacc 7162099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 325 - 413
Target Start/End: Complemental strand, 32737976 - 32737888
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  32737976 gggtgaagatcctctccatttggcaaaataaatagagttttgcaggttggagagagatagacacaaaaaatagatggtgggttccacca 32737888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 27826650 - 27826553
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||||| ||||||| || || |||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  27826650 gatcctctccatttggtaaaataactgaagatttgcaaggttgagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccacc 27826553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 332 - 421
Target Start/End: Original strand, 227526 - 227616
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagtgg 421  Q
    |||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  227526 gatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtgg 227616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 1516170 - 1516250
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||||| || |||||||||| ||||||| ||||||||    
T  1516170 gatcctatccatttggcaaaataaatggagttt-gcaatttggagagagatggatacaaaaaatagatggtggatcccacca 1516250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 1518259 - 1518339
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||||| || |||||||||| ||||||| ||||||||    
T  1518259 gatcctatccatttggcaaaataaatggagttt-gcaatttggagagagatggatacaaaaaatagatggtggatcccacca 1518339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 2142288 - 2142353
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||| || || ||||||||||||    
T  2142288 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccacc 2142353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 24484959 - 24484894
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| | |||||||||||| |||||    
T  24484959 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccacc 24484894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 726 - 848
Target Start/End: Complemental strand, 29694421 - 29694300
Alignment:
Q  726 atggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccacttttcgatgcaaacttactt 825  Q
    |||||||||||||||||||| | ||| ||| | |||||||||||||| ||||        |||| |||| |||||| |||||||| ||||||||||||||    
T  29694421 atggttaaggattctattaatagaaatattatcttggaaatacaagtttttatttttgt-cttaacaataattacatcacttttcaatgcaaacttactt 29694323  T
Q  826 atttaaatactttaaccaatgtc 848  Q
    |||| | ||||||||||||||||    
T  29694322 attttagtactttaaccaatgtc 29694300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 532
Target Start/End: Complemental strand, 29698130 - 29698075
Alignment:
Q  477 tctccaaattgaagaaatggagaaacacataaatggaggggattctaaccccatta 532  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  29698130 tctccaaattgaagaaatggagaaacacataaatggagaggatcctaacccaatta 29698075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 529
Target Start/End: Complemental strand, 4804416 - 4804363
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaacccca 529  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  4804416 ctctccaaattgaagaaatggagaaacatataaatggagaggatcctaacccca 4804363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 332 - 412
Target Start/End: Original strand, 1515505 - 1515584
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacc 412  Q
    |||||| || ||||||||||||||||||||||| |||| |||||||||||| || | |||||||| ||||||| |||||||    
T  1515505 gatcctatcaatttggcaaaataaatggagttt-gcaatttggagagagatggataaaaaaaatagatggtggatcccacc 1515584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 333 - 428
Target Start/End: Original strand, 7215816 - 7215911
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccac 428  Q
    ||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||| || |||||||| |||||||| ||||| ||||    
T  7215816 atcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccac 7215911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 32737842 - 32737791
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  32737842 ctctccaaattgaagaaatggagaaacatataaatggagaggatcctaaccc 32737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 479 - 528
Target Start/End: Original strand, 1249256 - 1249305
Alignment:
Q  479 tccaaattgaagaaatggagaaacacataaatggaggggattctaacccc 528  Q
    |||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  1249256 tccaaattgaagaaatggagaaacacataaatggagaggatcttaacccc 1249305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 28696624 - 28696680
Alignment:
Q  337 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaa 394  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||    
T  28696624 tctccatttggcaaaataaattgag-tttgcaatttggagagagatagacaaaaaaaa 28696680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 528
Target Start/End: Complemental strand, 7162052 - 7162000
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaacccc 528  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||    
T  7162052 ctctccaaattgaagaaatggagaaacacgtaaatagagaggatcctaacccc 7162000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 13888485 - 13888577
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||||| || ||  ||||||||| ||||||||||| ||||||||||||| |||||||| |||| ||||||| ||| |||| ||| |||||    
T  13888485 gatcctctcaatatgctaaaataaatagagttttgcaatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggt 13888577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 393
Target Start/End: Complemental strand, 30460930 - 30460875
Alignment:
Q  337 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaa 393  Q
    |||||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||    
T  30460930 tctccatttgacaaaataaatggag-tttgcaatttggagaaagatagacacaaaaa 30460875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 7545718 - 7545660
Alignment:
Q  364 ttgcaagttggagagagatagaca-caaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||| | ||||||||||    
T  7545718 ttgcaatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtgg 7545660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 796 - 840
Target Start/End: Original strand, 1407390 - 1407434
Alignment:
Q  796 attacaccacttttcgatgcaaacttacttatttaaatactttaa 840  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||    
T  1407390 attacatcacttttcgatgcaaacttacttattttagtactttaa 1407434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaca 389  Q
    ||||||||||||||| | ||||||||||| | ||||| |||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatggag-tatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 323 - 429
Target Start/End: Original strand, 2800565 - 2800671
Alignment:
Q  323 tggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtggg 422  Q
    |||||| | |||||||||||||||  ||||| ||||||  |   ||| ||||||||||||||||||| |||||| || |||| ||  |||| ||||||||    
T  2800565 tggggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtggg 2800664  T
Q  423 ttccacc 429  Q
    | |||||    
T  2800665 tcccacc 2800671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 7098190 - 7098248
Alignment:
Q  364 ttgcaagttggagagagatagac-acaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| |||||||||||||||| | ||||||||| |||||||||| | ||||||||||    
T  7098190 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtgg 7098248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 1e-40; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 324 - 429
Target Start/End: Complemental strand, 56558399 - 56558294
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  56558399 ggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtgggt 56558300  T
Q  424 tccacc 429  Q
     |||||    
T  56558299 cccacc 56558294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 19901874 - 19901978
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||     
T  19901874 gggtgaagatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtc 19901973  T
Q  425 ccacc 429  Q
    |||||    
T  19901974 ccacc 19901978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 33247086 - 33247190
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||| ||||||    
T  33247086 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggtt 33247185  T
Q  425 ccacc 429  Q
    |||||    
T  33247186 ccacc 33247190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 326 - 429
Target Start/End: Complemental strand, 34778539 - 34778436
Alignment:
Q  326 ggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttc 425  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||| |    
T  34778539 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcc 34778440  T
Q  426 cacc 429  Q
    ||||    
T  34778439 cacc 34778436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 325 - 423
Target Start/End: Original strand, 3952126 - 3952224
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  3952126 gggtgaagatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggt 3952224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 30568008 - 30567918
Alignment:
Q  337 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttcca 427  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30568008 tctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttcca 30567918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 325 - 413
Target Start/End: Complemental strand, 12153273 - 12153185
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  12153273 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaattagatggtgggtcccacca 12153185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 23610761 - 23610657
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||     
T  23610761 gggtgaagatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtc 23610662  T
Q  425 ccacc 429  Q
    |||||    
T  23610661 ccacc 23610657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 324 - 429
Target Start/End: Original strand, 5763117 - 5763222
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  5763117 ggggtgaagatcctctcaatttggcaaaatatatggagttttacaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggt 5763216  T
Q  424 tccacc 429  Q
     |||||    
T  5763217 cccacc 5763222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 5416422 - 5416525
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| ||||||||||||||     
T  5416422 gggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacac-aaaaatagattgtgggtcctaccactaagtgggtc 5416520  T
Q  425 ccacc 429  Q
    |||||    
T  5416521 ccacc 5416525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 423
Target Start/End: Original strand, 12312431 - 12312530
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagac-acaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||| ||||||||||||||    
T  12312431 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggt 12312530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 423
Target Start/End: Original strand, 18206996 - 18207094
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  18206996 gggtgaagatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggt 18207094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 423
Target Start/End: Complemental strand, 24073735 - 24073637
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    |||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  24073735 gggtgaagatcctccccatttggcaaaataaatggagatttgtaagttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggt 24073637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 325 - 413
Target Start/End: Complemental strand, 52018882 - 52018794
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  52018882 gggtgaagatcctctccatttagcaaaataaatggagttttgcaagttggagagagatagatacaaaaaataaatagtggatcccacca 52018794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 324 - 429
Target Start/End: Original strand, 38079675 - 38079780
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| ||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||| || ||||||||| |    
T  38079675 ggggtgaagatcctctccatttaacaaaataaatggagttttgctagtttgagagagatagacacaagaaatagatggtgggtcctactactaagtggat 38079774  T
Q  424 tccacc 429  Q
    ||||||    
T  38079775 tccacc 38079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 325 - 417
Target Start/End: Original strand, 33262508 - 33262600
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaa 417  Q
    |||||| ||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||    
T  33262508 gggtgaagatcctctctatttggcaaaataaattgtgttttgcaagttagagagagatagacacaaaaaatagatggtggatcctaccactaa 33262600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 702 - 846
Target Start/End: Complemental strand, 37626858 - 37626715
Alignment:
Q  702 ttgctaaccagtgtcttgaaagcgatggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattaca 801  Q
    |||||||| |||||| |||  || |||||||||||||  ||||| |||||| |||| |||||||||||||||||||        ||||||||| || |||    
T  37626858 ttgctaactagtgtcctgagggcaatggttaaggatttcattaatataaactttgtcttggaaatacaagtctttactttttt-cttatcaatgatcaca 37626760  T
Q  802 ccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||||||||||||||||||||||||||| | ||||||||||||||    
T  37626759 ccacttttcgatgcaaacttacttattttagtactttaaccaatg 37626715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 39862636 - 39862532
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||||||||||||||  ||||||||| || ||||||||||| ||||||||||||||||||||||| |||||| |||| | |||||| || |||    
T  39862636 gggtgaagatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagtt 39862537  T
Q  425 ccacc 429  Q
    |||||    
T  39862536 ccacc 39862532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 47922329 - 47922421
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagtgggt 423  Q
    |||||||||||||||  ||||||||| ||||||||||| ||||||||| |||||||||||| |||| ||||||||||| ||||||||||||||    
T  47922329 gatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggt 47922421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 33524381 - 33524313
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaa 393  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  33524381 gggtgaagatcctctccatttggcaaaataaatggagatttggaagttggagagagatagatacaaaaa 33524313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 726 - 842
Target Start/End: Original strand, 41260000 - 41260115
Alignment:
Q  726 atggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccacttttcgatgcaaacttactt 825  Q
    |||||||||||||| ||||| | |||| |||| ||| |||||||||||||||         |||||||| ||||||||||||||||||||||||||||||    
T  41260000 atggttaaggattccattaatagaaactttgtcttgaaaatacaagtctttatttttttt-ttatcaatgattacaccacttttcgatgcaaacttactt 41260098  T
Q  826 atttaaatactttaacc 842  Q
    |||| ||||||||||||    
T  41260099 attttaatactttaacc 41260115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 476 - 530
Target Start/End: Original strand, 17080747 - 17080801
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccccat 530  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17080747 ctctccaaattgaagaaatggagaaacacataaatggaggggatcctaaccccat 17080801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 56269071 - 56269136
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||    
T  56269071 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccacc 56269136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 476 - 532
Target Start/End: Original strand, 33247235 - 33247291
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccccatta 532  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  33247235 ctctccaaattgaagaaatggagaaacacataaatggagaggatcctaacccgatta 33247291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 12153139 - 12153088
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  12153139 ctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 12153088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 34778389 - 34778338
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  34778389 ctctccacattgaagaaatggagaaacacataaatggagaggattctaaccc 34778338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 52018751 - 52018700
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  52018751 ctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 52018700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 322 - 408
Target Start/End: Complemental strand, 23474232 - 23474147
Alignment:
Q  322 ttggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcc 408  Q
    ||||||| | |||||||||||||| ||| |||||||||||| | |||| |||| |||||||||||||| |||||| |||||||||||    
T  23474232 ttggggtaaagatcctctccatttagcataataaatggagtat-gcaatttggggagagatagacacataaaatagatggtgggtcc 23474147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 342 - 429
Target Start/End: Original strand, 47922052 - 47922135
Alignment:
Q  342 atttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||||||||||||| |||||||||||    | ||||| |||||||||||| || |||||||  ||||||||||||||||||||    
T  47922052 atttggcaaaataaatggaattttgcaagtt----aaagataaacacaaaaaatagatagtgggtcttaccactaagtgggttccacc 47922135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 5361506 - 5361457
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  5361506 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccacca 5361457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 479 - 527
Target Start/End: Original strand, 5416577 - 5416625
Alignment:
Q  479 tccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  5416577 tccaaattgaagaaatggagaaacacataaattgagaggattctaaccc 5416625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 796 - 848
Target Start/End: Complemental strand, 14124249 - 14124197
Alignment:
Q  796 attacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgtc 848  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  14124249 attacaccatttttcgatgcaaatttacttattttaatactttaaccaatgtc 14124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 1871388 - 1871298
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||||| ||||| ||||||||||||||| | |||| ||||||||||||||||| |||| ||| || |||| ||| || |||||||||||    
T  1871388 gatcctctcaatttgacaaaataaatggagtat-gcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggt 1871298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 12241515 - 12241566
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||    
T  12241515 ctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 12241566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 726 - 842
Target Start/End: Original strand, 52837943 - 52838058
Alignment:
Q  726 atggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccacttttcgatgcaaacttactt 825  Q
    |||||||| ||||  ||||| | ||||||| ||||||||||||| |||||||        |||| |||| |||| |||| ||||||||||||||||||||    
T  52837943 atggttaaagatttcattaatagaaacattattttggaaatacatgtctttactttttt-cttaacaataattataccatttttcgatgcaaacttactt 52838041  T
Q  826 atttaaatactttaacc 842  Q
    |||| ||||||||||||    
T  52838042 attttaatactttaacc 52838058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 791 - 846
Target Start/End: Complemental strand, 53654347 - 53654292
Alignment:
Q  791 caatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  53654347 caataattacaccatttttcgatgcaaacatacttattttaatactttaaccaatg 53654292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 17493083 - 17493017
Alignment:
Q  364 ttgcaagttggagagagatagacacaa-aaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||| | |||||||||| |||||||    
T  17493083 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggattccacc 17493017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 786 - 844
Target Start/End: Complemental strand, 21865247 - 21865189
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaa 844  Q
    |||| |||| ||||||||| |||||||||||||||||||||||| || |||||||||||    
T  21865247 cttagcaatgattacaccatttttcgatgcaaacttacttattttaaaactttaaccaa 21865189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 786 - 844
Target Start/End: Complemental strand, 21921108 - 21921050
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaa 844  Q
    |||| |||| ||||||||| |||||||||||||||||||||||| || |||||||||||    
T  21921108 cttagcaatgattacaccatttttcgatgcaaacttacttattttaaaactttaaccaa 21921050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 419
Target Start/End: Complemental strand, 34927596 - 34927510
Alignment:
Q  334 tcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagt 419  Q
    ||||||||||||   ||||||||||| ||||||||| ||  |||||||||||||||||| |||| ||||||||||| |||| |||||    
T  34927596 tcctctccatttactaaaataaatggggttttgcaatttaaagagagatagacacaaaagaatagatggtgggtcctaccattaagt 34927510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 1015849 - 1015914
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| || |||||||||||||||||||||||| |||||||||||| || || |||||| |||||    
T  1015849 ttgcaatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccacc 1015914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 5524527 - 5524462
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||| | || ||||||||| |||||    
T  5524527 ttgcaatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccacc 5524462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 476 - 529
Target Start/End: Original strand, 19902025 - 19902078
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaacccca 529  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||    
T  19902025 ctctccaaattgaagaaatagagaaacacataaatggagaggatcttaacccca 19902078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 36688183 - 36688248
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| || || |||| | |||||||||||| |||||    
T  36688183 ttgcaatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccacc 36688248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 47834644 - 47834595
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  47834644 ttgcaatttggagagagataggcacaaaaaataagtggtgggtcccacca 47834595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 786 - 847
Target Start/End: Complemental strand, 48497474 - 48497413
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgt 847  Q
    ||||||||| |||| ||||||||||||| |||||||| |||||| |||||||||| ||||||    
T  48497474 cttatcaatgattataccacttttcgatacaaacttatttattttaatactttaatcaatgt 48497413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 527
Target Start/End: Original strand, 18207150 - 18207198
Alignment:
Q  479 tccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  18207150 tccaaattgaagaaattgagaaacacataaatggagaggatcctaaccc 18207198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 429
Target Start/End: Original strand, 56453816 - 56453880
Alignment:
Q  365 tgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||| ||||||||||||||||||||||||||  |||||||||| | || ||||||||| |||||    
T  56453816 tgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggtcccacc 56453880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 5763269 - 5763320
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  5763269 ctctccaaattgaagaaatggagaaacatataaatggagatgatcctaaccc 5763320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 23610610 - 23610567
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  23610610 ctctccaaattgaagaaatggagaaacatataaatggagaggat 23610567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 47922182 - 47922233
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||| |||||||    
T  47922182 ctctctaaattgaagaaatggagaaacacataaattgagaggatcctaaccc 47922233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 56558247 - 56558196
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||| |||||||| |||||||||| |||| |||||||    
T  56558247 ctctccaaattgaagaaatagagaaacatataaatggagaggatcctaaccc 56558196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 514
Target Start/End: Original strand, 12312610 - 12312648
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggag 514  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  12312610 ctctctaaattgaagaaatggagaaacacataaatggag 12312648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 786 - 848
Target Start/End: Complemental strand, 33395392 - 33395330
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgtc 848  Q
    |||| |||| |||| ||||||||| |||| ||||||||| |||| ||||||||||||||||||    
T  33395392 cttagcaataattataccactttttgatgtaaacttactcattttaatactttaaccaatgtc 33395330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 36532736 - 36532640
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||| ||  |||||||||||||||   ||| || |||||||||||||||| ||||||||| |||| ||| | || | |||||||||||||    
T  36532736 gatcctctccatctgataaaataaatggagttca-caatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttccacc 36532640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 37002246 - 37002311
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||| ||||||||||||||||||||| |||||| ||| |  ||||||||||| |||||    
T  37002246 ttgcaatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccacc 37002311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 42010197 - 42010132
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||| ||||||||||| ||| |||||| | |||||| ||||| |||||    
T  42010197 ttgcaatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccacc 42010132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 508
Target Start/End: Original strand, 3952277 - 3952309
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataa 508  Q
    |||||||||||||||||||||||||||||||||    
T  3952277 ctctccaaattgaagaaatggagaaacacataa 3952309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 352 - 415
Target Start/End: Complemental strand, 26429061 - 26428997
Alignment:
Q  352 ataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccact 415  Q
    ||||||| |||||||||| ||||||| |||||||||||||| |||| |||||| |||| ||||||    
T  26429061 ataaatgaagttttgcaatttggagaaagatagacacaaaagaatagatggtgagtcctaccact 26428997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 786 - 846
Target Start/End: Original strand, 35827809 - 35827869
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||| |||||| || ||||||| |||||||||||||||| |||| |||||||||||    
T  35827809 cttaacaataattacatcatttttcgaagcaaacttacttattttaatattttaaccaatg 35827869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 786 - 865
Target Start/End: Complemental strand, 37858262 - 37858183
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttattta-aatactttaaccaatgtctccaaggataatgatta 865  Q
    |||| |||| |||| | ||||||||||||||||||| |||||||| | |||||||||||||| | |||| |||||||||||    
T  37858262 cttagcaataattaaatcacttttcgatgcaaacttccttatttatagtactttaaccaatg-ccccaaagataatgatta 37858183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 796 - 840
Target Start/End: Complemental strand, 48582231 - 48582187
Alignment:
Q  796 attacaccacttttcgatgcaaacttacttatttaaatactttaa 840  Q
    ||||||||| |||||||||||||||||||||||| | ||||||||    
T  48582231 attacaccatttttcgatgcaaacttacttattttagtactttaa 48582187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 420
Target Start/End: Complemental strand, 13493385 - 13493296
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagtt--ggagagagatagacacaaaaaataaatggtgggtcccaccactaagtg 420  Q
    ||||||||| ||||| |||||||||||||| | ||||| ||   |||||||||||||||  |||||| || |||| |||||||||||||||    
T  13493385 gatcctctctatttgacaaaataaatggag-tatgcaatttagagagagagatagacacgtaaaatagatagtggatcccaccactaagtg 13493296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 24073585 - 24073542
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||    
T  24073585 ctctccaaatggaagaaattgagaaacacataaatggagaggat 24073542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 395
Target Start/End: Original strand, 33841768 - 33841830
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaat 395  Q
    |||||||||||||||  ||| |||||||||| |  ||| |||||||||||||||||||||||||    
T  33841768 gatcctctccatttgttaaagtaaatggagtata-caatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 38079827 - 38079870
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||    
T  38079827 ctctccaaattgaaaaaatggagaaacgcataaatggagaggat 38079870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 39862485 - 39862434
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||  |||||||||||||||| || |||| |||||||    
T  39862485 ctctccaaattgaagaaaatgagaaacacataaatgaagaggatcctaaccc 39862434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 787 - 846
Target Start/End: Original strand, 47519290 - 47519349
Alignment:
Q  787 ttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||||||| ||||||| ||||||  ||||||||||||| |||| || |||||||||||||    
T  47519290 ttatcaataattacacaactttttaatgcaaacttactaattttaacactttaaccaatg 47519349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 32146583 - 32146525
Alignment:
Q  364 ttgcaagttggagagagatagacac-aaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| ||||||||||||||| || ||||||||| |||||||||| | ||||||||||    
T  32146583 ttgcaatttggagagagatagatacaaaaaaataagtggtgggtcctatcactaagtgg 32146525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 46239047 - 46238989
Alignment:
Q  364 ttgcaagttggagagagatagacacaa-aaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| ||| |||||||||||||||| ||||||| |||||||||| | ||||||||||    
T  46239047 ttgcaatttgaagagagatagacacaaaaaaataagtggtgggtcctatcactaagtgg 46238989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 332 - 426
Target Start/End: Original strand, 48914482 - 48914575
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttcc 426  Q
    |||| ||||||||| |||||||||||||||   ||||| || ||||||||| |||||| |||||| || |||||||| | ||  |||||||||||    
T  48914482 gatcttctccatttagcaaaataaatggag-aatgcaatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttcc 48914575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 53526169 - 53526111
Alignment:
Q  364 ttgcaagttggagagagatagac-acaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| |||||||||||||||| | ||||||||| |||||||||| | ||||||||||    
T  53526169 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtgg 53526111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 55160365 - 55160423
Alignment:
Q  364 ttgcaagttggagagagatagacac-aaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| ||||| |||||||||||| ||||||||| |||||||||| | ||||||||||    
T  55160365 ttgcaatttggaaagagatagacacaaaaaaataagtggtgggtcctatcactaagtgg 55160423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 25219070 - 25219018
Alignment:
Q  371 ttggagagagatagacacaa--aaaataaatggtgggtcccaccactaagtgg 421  Q
    ||||||||||||||||||||  ||||||| |||||||||| | ||||||||||    
T  25219070 ttggagagagatagacacaaaaaaaataagtggtgggtcctatcactaagtgg 25219018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 85; Significance: 5e-40; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 323 - 423
Target Start/End: Original strand, 16351 - 16451
Alignment:
Q  323 tggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtggg 422  Q
    |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16351 tggggtgaagatcctctccgttaggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtggg 16450  T
Q  423 t 423  Q
    |    
T  16451 t 16451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 16504 - 16555
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  16504 ctctccaaattgaagaaatggagaaacacataaattgagaggatcctaaccc 16555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 5e-40; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 35316944 - 35316840
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||     
T  35316944 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtc 35316845  T
Q  425 ccacc 429  Q
    |||||    
T  35316844 ccacc 35316840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 13238793 - 13238696
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||    
T  13238793 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccacc 13238696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 28565011 - 28564907
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||     
T  28565011 gggtgaagatcctctccatttggcaaaataaatggagttttttaagttgtagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtc 28564912  T
Q  425 ccacc 429  Q
    |||||    
T  28564911 ccacc 28564907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 23259441 - 23259539
Alignment:
Q  323 tggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||| || |||||||||    
T  23259441 tggggtgaagatcctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagctggtgggtcctactactaagtgg 23259539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 325 - 413
Target Start/End: Original strand, 45625035 - 45625123
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  45625035 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaagaaataaattgtgggtcccacca 45625123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 11864988 - 11864917
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaata 396  Q
    |||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11864988 gggtgaagatcctctccatttatcaaaataaatggagttttacaagttggagagagatagacacaaaaaata 11864917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 2063465 - 2063368
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatgg-tgggtcccaccactaagtgggttccacc 429  Q
    |||||||| |||||| |||||||||| |||||| |||| |||||||||||||||||||||||||| |||| | ||||| ||||| ||||||||||||||    
T  2063465 gatcctcttcatttgacaaaataaatagagttt-gcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggttccacc 2063368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 796 - 875
Target Start/End: Original strand, 31915111 - 31915190
Alignment:
Q  796 attacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgtctccaaggataatgatta-cattctcctt 875  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||| |||| ||| ||||||||||    
T  31915111 attacaccacttttcgatgcaaacttacttattttaatactttaaccaatg-ccccaaggacaatggttaccattctcctt 31915190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 786 - 846
Target Start/End: Complemental strand, 31921295 - 31921235
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  31921295 cttagcaatcattacaccacttttcgaggcaaacttacttatttaagtactttaaccaatg 31921235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 787 - 846
Target Start/End: Original strand, 8033327 - 8033386
Alignment:
Q  787 ttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  8033327 ttatcaataattacaccacttttcgatgcaaatttacttattttaatactttaaccaatg 8033386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 786 - 846
Target Start/End: Complemental strand, 35005278 - 35005218
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||| |||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  35005278 cttagcaatgattacaccacttttcgatgcaaacttacttattttagtactttaaccaatg 35005218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 40640782 - 40640706
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtc 407  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||||| | |||||| |||| ||||||||||    
T  40640782 gatcctctccatttgttaaaataaatggagttttgcaatttggagagagatatatacaaaagaatagatggtgggtc 40640706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 332 - 410
Target Start/End: Complemental strand, 38824138 - 38824059
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtccca 410  Q
    |||| |||| |||||  |||||||||||||||||| || ||||||||||||||||| |||| ||||||||||||||||||    
T  38824138 gatcatctctatttgctaaaataaatggagttttgtaatttggagagagatagacaaaaaagaataaatggtgggtccca 38824059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 375073 - 375008
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |  ||||||||||| |||||    
T  375073 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccacc 375008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 476 - 528
Target Start/End: Complemental strand, 10877670 - 10877618
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaacccc 528  Q
    |||||||||||||||||||||||||||||||||||| || |||| ||||||||    
T  10877670 ctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaacccc 10877618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 28564859 - 28564816
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  28564859 ctctccaaattgaagaaatggagaaacacataaatggagaggat 28564816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 35316793 - 35316742
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||||||    
T  35316793 ctctccaaattgaagaaatggagaaacacgtaaatggagaggatcctaaccc 35316742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 3354782 - 3354824
Alignment:
Q  371 ttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  3354782 ttggagagagatagacacaaaaaataagtggtgggtcccacca 3354824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 8988935 - 8988870
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| || | ||||| | |||||||||||| |||||    
T  8988935 ttgcaatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccacc 8988870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 23459841 - 23459906
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||| | |||||| ||||| |||||    
T  23459841 ttgcaatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccacc 23459906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 36929823 - 36929764
Alignment:
Q  336 ctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaata 396  Q
    |||||||||| |||||||||||||||| | |||| ||||||||||||||||||| ||||||    
T  36929823 ctctccatttagcaaaataaatggagtat-gcaatttggagagagatagacacataaaata 36929764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 786 - 846
Target Start/End: Original strand, 38373391 - 38373451
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||| ||||||||| ||||||||||||| |||||||||| |||| |||||||||||    
T  38373391 cttagcaataattacaccatttttcgatgcaaatttacttattttaatattttaaccaatg 38373451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 528
Target Start/End: Original strand, 41983446 - 41983498
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaacccc 528  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||  |||||||    
T  41983446 ctctccaaattaaagaaatggagaaacacataaatggagaggatcttaacccc 41983498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 333 - 424
Target Start/End: Original strand, 4446860 - 4446951
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    ||||||||||||||  ||||||||||||  | | ||| ||| ||||||||||||||| |||||| || |||| ||| |||||||| ||||||    
T  4446860 atcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtt 4446951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 39465743 - 39465700
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  39465743 ctctccaaattgaaaaaatggagaaacacataaatggagaggat 39465700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 13780579 - 13780521
Alignment:
Q  364 ttgcaagttggagagagatagacacaa-aaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||| | ||||||||||    
T  13780579 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtgg 13780521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 349 - 429
Target Start/End: Original strand, 21454476 - 21454554
Alignment:
Q  349 aaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||||| | || || ||||||||||||||| ||||||| || |||||||  |||| |||||||||||||||    
T  21454476 aaaataaatggagttt-gtaatttagagagagatagacac-aaaaatagattgtgggtcataccattaagtgggttccacc 21454554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 786 - 850
Target Start/End: Original strand, 31598095 - 31598158
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgtctc 850  Q
    |||| |||| |||| |||||||| |||||||||||||||||||| | || |||||||||||||||    
T  31598095 cttagcaataattataccacttt-cgatgcaaacttacttattttagtattttaaccaatgtctc 31598158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 332 - 428
Target Start/End: Original strand, 36758825 - 36758920
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccac 428  Q
    ||||||||||||||   ||||||||||||  || |||| ||||||||||||||||||||||| ||| |||||| ||| | |  || |||||||||||    
T  36758825 gatcctctccatttataaaaataaatggaagtt-gcaatttggagagagatagacacaaaaagtaagtggtggatcctatctttaggtgggttccac 36758920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 13238649 - 13238606
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  13238649 ctctccaaattgaagaaattgagaaacgcataaatggagaggat 13238606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 786 - 845
Target Start/End: Original strand, 18967758 - 18967817
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaat 845  Q
    |||| |||| ||||||| |||||||| ||||||||||| ||||| |||| ||||||||||    
T  18967758 cttaacaataattacacaacttttcgttgcaaacttacgtattttaatattttaaccaat 18967817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 15709874 - 15709785
Alignment:
Q  337 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttcca 427  Q
    |||| |||| |||||||||||||| | | |||| ||||||||||||| ||| | |||||| || |||| ||| |||| |||||||||||||    
T  15709874 tctcgatttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttcca 15709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 22061431 - 22061496
Alignment:
Q  330 acgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaata 396  Q
    ||||||||||| ||||| ||||||||||| || | ||||| ||| ||||||||||||||| ||||||    
T  22061431 acgatcctctcaatttgacaaaataaatgaag-tatgcaatttgaagagagatagacacataaaata 22061496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 30709183 - 30709133
Alignment:
Q  371 ttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    ||||||||||||||||||| |||||| ||  ||||||| ||||||||||||    
T  30709183 ttggagagagatagacacataaaatagatattgggtcctaccactaagtgg 30709133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 40254144 - 40254202
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagtgg 421  Q
    |||||| |||| ||||||||||||||||| ||||| |||||||||| | ||||||||||    
T  40254144 ttgcaatttggggagagatagacacaaaataataagtggtgggtcctatcactaagtgg 40254202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 786 - 855
Target Start/End: Complemental strand, 12800841 - 12800772
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgtctccaagg 855  Q
    |||| |||| |||| |||| |||||||| |||| |||||||| | |||||||||||||||| ||| ||||    
T  12800841 cttaacaataattagaccaattttcgatacaaatttacttatcttaatactttaaccaatgcctcaaagg 12800772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 365
Target Start/End: Original strand, 32009938 - 32009971
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagtttt 365  Q
    ||||||||||||||| ||||||||||||||||||    
T  32009938 gatcctctccatttgacaaaataaatggagtttt 32009971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 413
Target Start/End: Complemental strand, 39465826 - 39465789
Alignment:
Q  376 gagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  39465826 gagagatagatacaaaaaatagatggtgggtcccacca 39465789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 5e-40; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 50484505 - 50484401
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||     
T  50484505 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtc 50484406  T
Q  425 ccacc 429  Q
    |||||    
T  50484405 ccacc 50484401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 50294017 - 50294115
Alignment:
Q  323 tggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  50294017 tggggtgaagatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgg 50294115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 48327107 - 48327208
Alignment:
Q  322 ttggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||    
T  48327107 ttggggtgaagatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgg 48327206  T
Q  422 gt 423  Q
    ||    
T  48327207 gt 48327208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 12151886 - 12151782
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| || |||||||| ||||||||||||||     
T  12151886 gggtgaagatcttctccatttggcaaaataaatggagttttgccagttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtc 12151787  T
Q  425 ccacc 429  Q
    |||||    
T  12151786 ccacc 12151782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 332 - 429
Target Start/End: Complemental strand, 40328387 - 40328293
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  40328387 gatcctctccatttggcaaaataaatggagttttgcaaattg--gagagatagacac-aaaaatagatggtgggtcccaccactaagtgggttccacc 40328293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 324 - 396
Target Start/End: Original strand, 12380832 - 12380904
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaata 396  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12380832 ggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaata 12380904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 324 - 396
Target Start/End: Original strand, 12384899 - 12384971
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaata 396  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12384899 ggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaata 12384971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 45978124 - 45978039
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtccca 410  Q
    |||||| ||||||||| |||||  ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  45978124 gggtgaagatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtccca 45978039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 7840635 - 7840739
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||| |||| |||| ||||     
T  7840635 gggtgaagatcctattcatttggcagaataaatggagttttgtaagttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggtc 7840734  T
Q  425 ccacc 429  Q
    |||||    
T  7840735 ccacc 7840739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 23861916 - 23861987
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgg 404  Q
    |||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  23861916 atcctctctatttagcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtgg 23861987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 786 - 848
Target Start/End: Original strand, 26701584 - 26701646
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgtc 848  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  26701584 cttatcaatcattacatcacttttcgatgcaaacttacttatttaagtactttaaccaatgtc 26701646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 332 - 419
Target Start/End: Original strand, 18976267 - 18976355
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagt 419  Q
    |||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||| |||| ||||||| ||| |||| |||||    
T  18976267 gatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagt 18976355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 476 - 533
Target Start/End: Complemental strand, 45977990 - 45977933
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccccattat 533  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  45977990 ctctccaaattgaagaaatggagaaacacataaatggagaggatcctaacccccttat 45977933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 786 - 846
Target Start/End: Original strand, 2193324 - 2193384
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  2193324 cttatcaatgattacaccacttttcgatgtaaatttacttattttaatactttaaccaatg 2193384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 340 - 428
Target Start/End: Complemental strand, 24977343 - 24977256
Alignment:
Q  340 ccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccac 428  Q
    |||||| ||||||||||||  ||||  ||| || ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  24977343 ccatttagcaaaataaatgatgttta-caatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccac 24977256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 12381017 - 12381068
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  12381017 ctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 12381068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 12385084 - 12385135
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  12385084 ctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 12385135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 333 - 419
Target Start/End: Original strand, 32361271 - 32361357
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagt 419  Q
    |||||||||||||||  |||||| | |||||||| ||||||||||||||| ||||||||| ||| ||||||| ||| || |||||||    
T  32361271 atcctctccatttggtgaaataattagagttttgtaagttggagagagatggacacaaaagatagatggtggatcctactactaagt 32361357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 684 - 847
Target Start/End: Complemental strand, 44603787 - 44603625
Alignment:
Q  684 ataattataataagagtgttgctaaccagtgtcttgaaagcgatggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnn 783  Q
    ||||||||| | || || ||||||||||||| | | |  || |||||||||||| | ||||| |||||| |||| ||| || ||||| ||||||          
T  44603787 ataattatagttagggtcttgctaaccagtgccctaagggcaatggttaaggatcccattaatataaactttgtcttgaaagtacaaatctttatttttt 44603688  T
Q  784 nncttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgt 847  Q
      |||| ||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||    
T  44603687 t-cttagcaatcattacaccactttttgaggcaaacttacttatttaagtactttaatcaatgt 44603625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 791 - 846
Target Start/End: Original strand, 8772461 - 8772516
Alignment:
Q  791 caatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| ||||||||||||||||||||||| |||||||||| | ||||||||||||||    
T  8772461 caataattacaccacttttcgatgcaaatttacttattttagtactttaaccaatg 8772516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 786 - 847
Target Start/End: Original strand, 4489326 - 4489387
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgt 847  Q
    ||||||||| ||||||  |||||||  ||||||||||||||||| |||||||||||||||||    
T  4489326 cttatcaatgattacataacttttctttgcaaacttacttattttaatactttaaccaatgt 4489387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 30860741 - 30860794
Alignment:
Q  341 catttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaa 394  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  30860741 catttagcaaaatgaatggagttttgcaagttggagagatatagacataaaaaa 30860794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 52280034 - 52280091
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||| | ||||||||||    
T  52280034 ttgcaatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtgg 52280091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 1228503 - 1228563
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa 392  Q
    |||||||| |||||   ||||||||||||||||||||| ||||||||||| ||||||||||    
T  1228503 gatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacacaaaa 1228563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 420
Target Start/End: Original strand, 30077639 - 30077695
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtg 420  Q
    |||||| ||||||||||||||||||||||||||| |||||||| | | |||||||||    
T  30077639 ttgcaatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtg 30077695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 528
Target Start/End: Complemental strand, 50484354 - 50484302
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaacccc 528  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||  |||||||    
T  50484354 ctctccaaattaaagaaatggagaaacacataaatggagaggatcttaacccc 50484302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 428
Target Start/End: Complemental strand, 39426317 - 39426226
Alignment:
Q  337 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccac 428  Q
    ||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||| || |||||||| |||||||| ||||| ||||    
T  39426317 tctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccac 39426226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 512
Target Start/End: Complemental strand, 12151735 - 12151699
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatgg 512  Q
    |||||||||||||| ||||||||||||||||||||||    
T  12151735 ctctccaaattgaataaatggagaaacacataaatgg 12151699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 479 - 527
Target Start/End: Original strand, 23862066 - 23862114
Alignment:
Q  479 tccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||| ||||||||||| |||| || ||||||||||||    
T  23862066 tccaaattgaagaaatagagaaacacatgaatgaagaggattctaaccc 23862114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 7841817 - 7841868
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||| ||||| |||||||||| | || |||||||    
T  7841817 ctctccaaattgaagaaatggaaaaacatataaatggagagaatcctaaccc 7841868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 417
Target Start/End: Original strand, 18107316 - 18107370
Alignment:
Q  364 ttgcaagttggagagagatagacac-aaaaaataaatggtgggtcccaccactaa 417  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||| | ||||||    
T  18107316 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaa 18107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 812 - 845
Target Start/End: Complemental strand, 8376359 - 8376326
Alignment:
Q  812 atgcaaacttacttatttaaatactttaaccaat 845  Q
    |||||||||||||||||| |||||||||||||||    
T  8376359 atgcaaacttacttattttaatactttaaccaat 8376326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 786 - 839
Target Start/End: Complemental strand, 15330904 - 15330851
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatacttta 839  Q
    |||| |||| ||||||| | |||||||||||||||| ||||||| |||||||||    
T  15330904 cttagcaataattacacaatttttcgatgcaaactttcttattttaatacttta 15330851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 324 - 423
Target Start/End: Complemental strand, 208183 - 208084
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  208183 ggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggt 208084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 208031 - 207980
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  208031 ctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 207980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 2e-39; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 28069841 - 28069734
Alignment:
Q  322 ttggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  28069841 ttggggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgg 28069742  T
Q  422 gttccacc 429  Q
    || |||||    
T  28069741 gtcccacc 28069734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 30426625 - 30426729
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||     
T  30426625 gggtgaagaccctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtc 30426724  T
Q  425 ccacc 429  Q
    |||||    
T  30426725 ccacc 30426729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 36991475 - 36991371
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||| ||||||||||||||     
T  36991475 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtc 36991376  T
Q  425 ccacc 429  Q
    |||||    
T  36991375 ccacc 36991371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 10672470 - 10672572
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| ||| ||||||||||| ||     
T  10672470 gggtgaagattctctccatttggcaaaataaatggagttttgcaagttg--gagagatagacacaaaaaatagatggtggatcctaccactaagtgagtc 10672567  T
Q  425 ccacc 429  Q
    |||||    
T  10672568 ccacc 10672572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 40695204 - 40695307
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||    
T  40695204 gggtgaagatcttctccatttagcaaaataaatggagtttgg-aagttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagtt 40695302  T
Q  425 ccacc 429  Q
    |||||    
T  40695303 ccacc 40695307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 324 - 429
Target Start/End: Original strand, 10652572 - 10652677
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||  ||||||||||  || ||||| |||||    
T  10652572 ggggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattgggt 10652671  T
Q  424 tccacc 429  Q
     |||||    
T  10652672 cccacc 10652677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 5033372 - 5033310
Alignment:
Q  324 ggggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagac 386  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5033372 ggggtgaagatcctttccatttggcaaaataaatggagttttgcaagttggagagagatagac 5033310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 332 - 429
Target Start/End: Original strand, 44859132 - 44859227
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||| ||||| ||||||||||||||||||||||||| |||||||||||  || ||||||| ||||||||| | |||||||||||||| |||||    
T  44859132 gatcctctctatttgacaaaataaatggagttttgcaagttagagagagatag--actaaaaatagatggtgggttctaccactaagtgggtcccacc 44859227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 333 - 429
Target Start/End: Complemental strand, 41511373 - 41511277
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||||||| | |||||||| || |||||||| | |||||||||| |||||||    
T  41511373 atcctctccgtttaacaaaataaatggagttttgcaagttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccacc 41511277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 332 - 420
Target Start/End: Complemental strand, 45113383 - 45113294
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagtg 420  Q
    |||||||||||||||  ||||||||| | ||||||||| ||||||||| |||||||||||| |||| ||||||||||| |||||||||||    
T  45113383 gatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtg 45113294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 332 - 417
Target Start/End: Original strand, 37966407 - 37966491
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaa 417  Q
    |||||||||||||||||||||||||||||  ||||||| ||| ||||||||| |||||||||||| || || ||||| ||||||||    
T  37966407 gatcctctccatttggcaaaataaatgga-atttgcaatttgaagagagataaacacaaaaaatagattgtaggtcctaccactaa 37966491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 786 - 861
Target Start/End: Original strand, 29374568 - 29374642
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatgtctccaaggataatg 861  Q
    |||| |||| ||||||||||||||||||| ||| |||||||||| | ||||||||||||||||| |||||||||||    
T  29374568 cttagcaataattacaccacttttcgatgtaaatttacttattttactactttaaccaatgtct-caaggataatg 29374642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 332 - 421
Target Start/End: Complemental strand, 6014307 - 6014217
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagtgg 421  Q
    |||||||||||||||  ||||||||| ||||||||||| ||||||| |||||||||||||| |||| ||| | ||||| |||| |||||||    
T  6014307 gatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtgg 6014217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 360 - 413
Target Start/End: Original strand, 12177572 - 12177625
Alignment:
Q  360 agttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  12177572 agttttgcaagttggagagagatagatacaaaaaatagatggtggatcccacca 12177625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 360 - 413
Target Start/End: Original strand, 12422000 - 12422053
Alignment:
Q  360 agttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  12422000 agttttgcaagttggagagagatagatacaaaaaatagatggtggatcccacca 12422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 26749543 - 26749608
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| || ||||||| | |||||||||||| |||||    
T  26749543 ttgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccacc 26749608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 361 - 429
Target Start/End: Complemental strand, 24102099 - 24102031
Alignment:
Q  361 gttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||||||  ||||||||||||| |||||||| ||||||| ||| ||||||||||| ||||||||    
T  24102099 gttttgcaagtttaagagagatagacataaaaaatagatggtggatcctaccactaagtgagttccacc 24102031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 28318869 - 28318925
Alignment:
Q  342 atttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaa 398  Q
    |||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  28318869 atttggtaaaataaatggagttttgcaagtttgagagagatatacaaaaaaaataaa 28318925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 30426776 - 30426827
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||| |||||||||||||||| |||| |||||||    
T  30426776 ctctccaaattgaagaaatggaaaaacacataaatggagaggatcctaaccc 30426827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 36991324 - 36991273
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||    
T  36991324 ctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 36991273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 726 - 841
Target Start/End: Original strand, 41168624 - 41168739
Alignment:
Q  726 atggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatc-aatcattacaccacttttcgatgcaaacttact 824  Q
    |||||||||||||| ||||| | ||||||||| |||||||||||||||||||        |||| | ||| |||||| |||||||| |||||||||||||    
T  41168624 atggttaaggattccattaataaaaacattgtcttggaaatacaagtcttta-cttttgtcttagcaaataattacatcacttttcaatgcaaacttact 41168722  T
Q  825 tatttaaatactttaac 841  Q
    ||||| | |||||||||    
T  41168723 tattttagtactttaac 41168739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 41511230 - 41511179
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||| |||||||||||||||| |||| |||||||    
T  41511230 ctctccaaattgaagaaatggaaaaacacataaatggagaggatcctaaccc 41511179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 34612634 - 34612585
Alignment:
Q  374 gagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  34612634 gagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggt 34612585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 786 - 846
Target Start/End: Complemental strand, 12956305 - 12956245
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||| ||||||||| ||||||||||||||||||||| || | ||||||||||||||    
T  12956305 cttagcaatgattacaccaattttcgatgcaaacttacttactttagtactttaaccaatg 12956245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 802 - 846
Target Start/End: Complemental strand, 22488837 - 22488793
Alignment:
Q  802 ccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  22488837 ccacttttcgatgtaaacttacttatttaagtactttaaccaatg 22488793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 5033074 - 5033031
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  5033074 ctctccaaattgaagaaatggagaaacatataaatggagaggat 5033031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 10652725 - 10652768
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  10652725 ctctccaaattgaagaaatgaagaaacacataaatggagaggat 10652768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 378 - 420
Target Start/End: Complemental strand, 5033150 - 5033108
Alignment:
Q  378 gagatagacacaaaaaataaatggtgggtcccaccactaagtg 420  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  5033150 gagatagacacaaaaaatagatggtgggtcctaccactaagtg 5033108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 17867654 - 17867712
Alignment:
Q  364 ttgcaagttggagagagatagacac-aaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||| | ||||||||||    
T  17867654 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtgg 17867712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 514
Target Start/End: Original strand, 28319009 - 28319047
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggag 514  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  28319009 ctctccaaattgaagaaatggagaaacacgtaaatggag 28319047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 730 - 829
Target Start/End: Original strand, 44167166 - 44167264
Alignment:
Q  730 ttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccacttttcgatgcaaacttacttattt 829  Q
    |||| ||||||||||| | |||| |||| |||||||||||| ||||||        |||| |||| ||||||| ||||||||||||||||||||||||||    
T  44167166 ttaatgattctattaatagaaactttgtcttggaaatacaaatctttactttttt-cttagcaatgattacacaacttttcgatgcaaacttacttattt 44167264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 527
Target Start/End: Original strand, 12177677 - 12177722
Alignment:
Q  482 aaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||    
T  12177677 aaattgaagaaatggagaaacacataaatagagaggatcctaaccc 12177722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 527
Target Start/End: Original strand, 12422105 - 12422150
Alignment:
Q  482 aaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||    
T  12422105 aaattgaagaaatggagaaacacataaatagagaggatcctaaccc 12422150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 10672619 - 10672670
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||| ||||| ||||||||||||||| || |||| |||||||    
T  10672619 ctctccaaattgaataaatgaagaaacacataaatgaagaggatactaaccc 10672670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 1937149 - 1937215
Alignment:
Q  364 ttgcaagttggagagagatagacac-aaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| |||||||||||||||||| |||||| || |||||||||| | ||||||| |||| |||||    
T  1937149 ttgcaatttggagagagatagacacaaaaaaacaagtggtgggtcctatcactaagcgggtcccacc 1937215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 18689597 - 18689508
Alignment:
Q  337 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttcca 427  Q
    |||| |||| |||||||||||||| | | |||| ||||||||||||| ||| | |||||| || |||| ||| |||| |||||||||||||    
T  18689597 tctcgatttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttcca 18689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 726 - 772
Target Start/End: Complemental strand, 22488918 - 22488872
Alignment:
Q  726 atggttaaggattctattaacataaacattgttttggaaatacaagt 772  Q
    |||||||||||||| ||||| | |||| |||||||||||||||||||    
T  22488918 atggttaaggattccattaatagaaactttgttttggaaatacaagt 22488872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 42761808 - 42761730
Alignment:
Q  349 aaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttcca 427  Q
    ||||||||||||  |  |||| ||| ||||||||||||||| |||||| || |||| ||| |||||| |||||||||||    
T  42761808 aaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttcca 42761730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 1e-37; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 43719903 - 43720007
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||     
T  43719903 gggtgaagatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtc 43720002  T
Q  425 ccacc 429  Q
    |||||    
T  43720003 ccacc 43720007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 333 - 429
Target Start/End: Complemental strand, 2230094 - 2229998
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||    
T  2230094 atcctctccatttggcaaaataattggagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccacc 2229998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 19830387 - 19830491
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| |||| |||||||||     
T  19830387 gggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtc 19830486  T
Q  425 ccacc 429  Q
    |||||    
T  19830487 ccacc 19830491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 333 - 421
Target Start/End: Complemental strand, 46167504 - 46167416
Alignment:
Q  333 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  46167504 atcctctccatttagcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtgg 46167416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 24754776 - 24754673
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||  |||| ||||||||||||||     
T  24754776 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtc 24754677  T
Q  425 ccac 428  Q
    ||||    
T  24754676 ccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 24763773 - 24763670
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||  |||| ||||||||||||||     
T  24763773 gggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtc 24763674  T
Q  425 ccac 428  Q
    ||||    
T  24763673 ccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 325 - 421
Target Start/End: Complemental strand, 27033770 - 27033674
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  27033770 gggtgaagatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgg 27033674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 34373950 - 34373858
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaa 417  Q
    |||||| ||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  34373950 gggtgaagattctctccatttggcaaaataaattgtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaa 34373858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 327 - 423
Target Start/End: Complemental strand, 40851891 - 40851795
Alignment:
Q  327 gtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | ||||||||||||||    
T  40851891 gtgaagatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggt 40851795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 48084932 - 48084840
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aataaatggtgggtcccaccactaagtgggt 423  Q
    |||||||||||||||  ||||||||| ||||||||||| |||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  48084932 gatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 343 - 429
Target Start/End: Original strand, 34373559 - 34373645
Alignment:
Q  343 tttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||||||||| ||||||||||||||  | |||||||||||| ||||||| ||||||||||| |||||||||||||| |||||    
T  34373559 tttggcaaaataaatagagttttgcaagttccatagagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccacc 34373645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 727 - 846
Target Start/End: Complemental strand, 54153985 - 54153867
Alignment:
Q  727 tggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccacttttcgatgcaaacttactta 826  Q
    ||||||| ||||| ||||| | |||| ||||  ||||||||||||||||||        ||||||||| |||| ||||||||||||||||||||||||||    
T  54153985 tggttaaagattccattaataaaaactttgtcatggaaatacaagtctttactttttt-cttatcaatgattaaaccacttttcgatgcaaacttactta 54153887  T
Q  827 tttaaatactttaaccaatg 846  Q
    ||| | ||||||||||||||    
T  54153886 ttttagtactttaaccaatg 54153867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 727 - 845
Target Start/End: Original strand, 44765271 - 44765388
Alignment:
Q  727 tggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattacaccacttttcgatgcaaacttactta 826  Q
    ||||||||||||| | |||   |||| ||||||||||||||||||||||||        |||| |||| ||||||||||||||| |||||||||||||||    
T  44765271 tggttaaggattccaataatggaaactttgttttggaaatacaagtctttacttattt-cttagcaataattacaccacttttcaatgcaaacttactta 44765369  T
Q  827 tttaaatactttaaccaat 845  Q
    ||| |||||||||| ||||    
T  44765370 ttttaatactttaatcaat 44765388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 786 - 846
Target Start/End: Complemental strand, 9248458 - 9248398
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    ||||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||    
T  9248458 cttatcaatgattataccacttttcgatgcaaacttatttattttaatactttaaccaatg 9248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 24647957 - 24647905
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggaga 377  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  24647957 gggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggaga 24647905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 31523663 - 31523728
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |  ||||||||||| |||||    
T  31523663 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccacc 31523728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 349 - 429
Target Start/End: Complemental strand, 12403061 - 12402981
Alignment:
Q  349 aaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||| || ||||||| | | ||||||||||| || |||||    
T  12403061 aaaataaatagagttttgcaagttggagagagatagatataaaaattagatggtggattctaccactaagtgagtcccacc 12402981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 342 - 429
Target Start/End: Original strand, 550790 - 550876
Alignment:
Q  342 atttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||||||||| ||||||| ||||||| ||||| | |||||||||| ||||||| ||| | || ||||||||| |||||    
T  550790 atttggcaaaataaatggag-tttgcaatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccacc 550876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 40851741 - 40851690
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||||||| |||||||||||| |||| |||||||    
T  40851741 ctctccaaattgaagaaatggagaaatacataaatggagaggatcctaaccc 40851690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 43720054 - 43720105
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||||||||||||||||||||||||||||||||||||||  ||| |||||||    
T  43720054 ctctccaaattgaagaaatggagaaacacataaatggagaagatcctaaccc 43720105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 514
Target Start/End: Original strand, 34373692 - 34373730
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggag 514  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34373692 ctctccaaattgaagaaatggagaaacacataaatggag 34373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 566746 - 566798
Alignment:
Q  341 catttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaa 394  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  566746 catttggcaaaataaatggag-tttgcaatttggagagagatagatacaaaaaa 566798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 27959170 - 27959121
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    |||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  27959170 ttgcaatttggggagagatagacacaaaaaataagtggtgggtcccacca 27959121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 42613160 - 42613095
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||| ||||||||||||| ||||||||| |||||||||| | |||||||||||| |||||    
T  42613160 ttgcaatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccacc 42613095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 49679265 - 49679330
Alignment:
Q  364 ttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||| | |||||| ||||| |||||    
T  49679265 ttgcaatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccacc 49679330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 702 - 846
Target Start/End: Original strand, 4195303 - 4195446
Alignment:
Q  702 ttgctaaccagtgtcttgaaagcgatggttaaggattctattaacataaacattgttttggaaatacaagtctttannnnnnnncttatcaatcattaca 801  Q
    ||||||||||||| ||| |  || |||||||||||||| ||||| |  ||  ||||||||||||||||| ||||||        |||| |||  ||||||    
T  4195303 ttgctaaccagtgccttaagggcaatggttaaggattccattaatagtaattttgttttggaaatacaattctttacttttcttcttagcaaa-attaca 4195401  T
Q  802 ccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    ||| ||||  |||||||||||||||||| | ||||||||||||||    
T  4195402 ccatttttttatgcaaacttacttattttagtactttaaccaatg 4195446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 413
Target Start/End: Complemental strand, 3009332 - 3009253
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccacca 413  Q
    ||||||||||||||   ||||||||||||  || |||| ||||||||||||||||| ||||||||| || ||||||||||||    
T  3009332 gatcctctccatttataaaaataaatggaagtt-gcaatttggagagagatagaca-aaaaaataagtgatgggtcccacca 3009253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 786 - 846
Target Start/End: Original strand, 32375277 - 32375337
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||| ||||||||||||||| |||| ||||||||||||| | ||||||||| ||||    
T  32375277 cttagcaataattacaccacttttcaatgctaacttacttattttagtactttaactaatg 32375337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 786 - 846
Target Start/End: Complemental strand, 47510804 - 47510744
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||| ||||||||| |||||||| ||||||||||||||| | |||||||| |||||    
T  47510804 cttaacaataattacaccatttttcgatacaaacttacttattttagtactttaatcaatg 47510744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 550923 - 550966
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||    
T  550923 ctctccaaatggaagaaatggagaaagacataaatggagaggat 550966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 2229951 - 2229900
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    ||||||||||| ||||||| |||||||||||||||| || |||| |||||||    
T  2229951 ctctccaaattaaagaaatagagaaacacataaatgaagaggatcctaaccc 2229900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 786 - 829
Target Start/End: Original strand, 25118646 - 25118689
Alignment:
Q  786 cttatcaatcattacaccacttttcgatgcaaacttacttattt 829  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||    
T  25118646 cttagcaatgattacaccacttttcaatgcaaacttacttattt 25118689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 476 - 514
Target Start/End: Complemental strand, 46167361 - 46167323
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggag 514  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  46167361 ctctctaaattgaagaaatggaaaaacacataaatggag 46167323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 509
Target Start/End: Original strand, 19830539 - 19830572
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaa 509  Q
    |||||||||||||||||||||| |||||||||||    
T  19830539 ctctccaaattgaagaaatggaaaaacacataaa 19830572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 77; Significance: 3e-35; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 9157 - 9261
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggtt 424  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||| ||    
T  9157 gggtgaagatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggatt 9256  T
Q  425 ccacc 429  Q
    |||||    
T  9257 ccacc 9261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 9305 - 9348
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggat 519  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||    
T  9305 ctctccaaatggaagaaattgagaaacacataaatggagaggat 9348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 72; Significance: 3e-32; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 429
Target Start/End: Complemental strand, 7270 - 7162
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaat----ggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtg 420  Q
    |||||| ||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||||||||| || | ||||||    
T  7270 gggtgaagatcctctccatttggcaaaataaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctactattaagtg 7171  T
Q  421 ggttccacc 429  Q
    |||||||||    
T  7170 ggttccacc 7162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 7115 - 7064
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggaggggattctaaccc 527  Q
    |||| ||||||||||||||| |||||||||||||||||| |||| |||||||    
T  7115 ctctgcaaattgaagaaatgaagaaacacataaatggagaggatcctaaccc 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 332 - 410
Target Start/End: Original strand, 73820 - 73898
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtccca 410  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  73820 gatcctctctatttggcaaaataaatggtgttttgcaagttggagagagatagacgcaaaatatagatggtgggtccca 73898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 514
Target Start/End: Original strand, 73947 - 73985
Alignment:
Q  476 ctctccaaattgaagaaatggagaaacacataaatggag 514  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  73947 ctctctaaattgaagaaatggagaaacacataaatggag 73985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 325 - 413
Target Start/End: Complemental strand, 13799 - 13710
Alignment:
Q  325 gggtgacgatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagac-acaaaaaataaatggtgggtcccacca 413  Q
    |||||| |||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||    
T  13799 gggtgaagatcttctccatttggcaaaataaatagagttttgctagttggagagagatagacaaaaaaaaatagatggtgggtcccacca 13710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 6398 - 6489
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggt 423  Q
    ||||||||| |||| | |||||||||||  |||||||||||||| ||||| |||||||||||||| ||||||||||| || ||||| |||||    
T  6398 gatcctctctatttcgtaaaataaatgggattttgcaagttggaaagagacagacacaaaaaatagatggtgggtcctacaactaaatgggt 6489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 332 - 428
Target Start/End: Original strand, 22406 - 22501
Alignment:
Q  332 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccac 428  Q
    |||||||| ||||| |||||||||||||||||| |||| ||  | |||||||||||||||||||| || |||| ||| ||||||||||| |||||||    
T  22406 gatcctctgcatttagcaaaataaatggagttt-gcaatttacaaagagatagacacaaaaaatagatagtggatcctaccactaagtgagttccac 22501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 791 - 846
Target Start/End: Original strand, 246574 - 246629
Alignment:
Q  791 caatcattacaccacttttcgatgcaaacttacttatttaaatactttaaccaatg 846  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  246574 caataattacaccacttttcgatgcaaacttacttattttagtactttaactaatg 246629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 374 - 429
Target Start/End: Original strand, 17311 - 17366
Alignment:
Q  374 gagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttccacc 429  Q
    |||||||||||||||||||||||| || ||||||| | |||||||||||| |||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccacc 17366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 4695 - 4753
Alignment:
Q  364 ttgcaagttggagagagatagacac-aaaaaataaatggtgggtcccaccactaagtgg 421  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||| | ||||||||||    
T  4695 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtgg 4753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 58786 - 58697
Alignment:
Q  337 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcccaccactaagtgggttcca 427  Q
    |||| |||| |||||||||||||| | | |||| ||||||||||||| ||| | |||||| || |||| ||| |||| |||||||||||||    
T  58786 tctcgatttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttcca 58697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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