View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0673_high_19 (Length: 342)

Name: NF0673_high_19
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0673_high_19
NF0673_high_19
[»] chr8 (58 HSPs)
chr8 (202-285)||(38909380-38909464)
chr8 (17-83)||(38909294-38909360)
chr8 (17-83)||(6816039-6816105)
chr8 (17-83)||(11924775-11924841)
chr8 (17-83)||(36059276-36059342)
chr8 (17-83)||(37034832-37034898)
chr8 (17-83)||(38139319-38139385)
chr8 (17-81)||(38137721-38137785)
chr8 (17-83)||(39486028-39486094)
chr8 (17-83)||(44908503-44908569)
chr8 (17-83)||(169705-169771)
chr8 (17-83)||(1877578-1877644)
chr8 (17-83)||(7219386-7219452)
chr8 (17-83)||(16239168-16239234)
chr8 (17-83)||(17046010-17046076)
chr8 (17-83)||(17313541-17313607)
chr8 (17-83)||(36216576-36216642)
chr8 (17-83)||(39525460-39525526)
chr8 (17-83)||(39685430-39685496)
chr8 (17-83)||(42844287-42844352)
chr8 (17-83)||(43817964-43818030)
chr8 (17-83)||(44602938-44603004)
chr8 (18-83)||(27467720-27467785)
chr8 (21-83)||(12261469-12261532)
chr8 (24-83)||(41526324-41526383)
chr8 (17-83)||(2184410-2184476)
chr8 (21-83)||(11579204-11579266)
chr8 (17-83)||(14718874-14718940)
chr8 (17-83)||(26518796-26518861)
chr8 (17-83)||(34805796-34805862)
chr8 (27-83)||(14449611-14449667)
chr8 (23-70)||(9275854-9275901)
chr8 (28-83)||(27877985-27878040)
chr8 (28-83)||(28018166-28018221)
chr8 (17-83)||(2190647-2190713)
chr8 (17-83)||(16845035-16845101)
chr8 (17-83)||(34997538-34997604)
chr8 (17-79)||(41360997-41361059)
chr8 (21-83)||(42984002-42984064)
chr8 (17-82)||(34325870-34325935)
chr8 (17-78)||(1922396-1922454)
chr8 (21-83)||(15310407-15310470)
chr8 (21-83)||(15490776-15490839)
chr8 (28-83)||(27914929-27914984)
chr8 (28-83)||(27961348-27961403)
chr8 (25-83)||(45139050-45139108)
chr8 (26-83)||(39997991-39998048)
chr8 (39-83)||(27748864-27748908)
chr8 (17-68)||(30550970-30551020)
chr8 (17-68)||(44215719-44215769)
chr8 (21-78)||(12251483-12251539)
chr8 (21-78)||(39443669-39443725)
chr8 (21-81)||(40048678-40048739)
chr8 (34-83)||(41904780-41904829)
chr8 (34-83)||(45296785-45296834)
chr8 (34-78)||(19245453-19245497)
chr8 (34-78)||(19318637-19318681)
chr8 (17-73)||(44655074-44655130)
[»] scaffold0244 (1 HSPs)
scaffold0244 (17-83)||(7574-7640)
[»] chr3 (57 HSPs)
chr3 (17-83)||(12101464-12101530)
chr3 (17-83)||(35690212-35690278)
chr3 (17-83)||(7040890-7040956)
chr3 (17-83)||(39721268-39721334)
chr3 (17-83)||(43316516-43316582)
chr3 (17-81)||(44762725-44762789)
chr3 (17-81)||(48961128-48961192)
chr3 (17-83)||(14587387-14587453)
chr3 (17-83)||(20849404-20849470)
chr3 (17-83)||(38361759-38361825)
chr3 (17-83)||(46090118-46090184)
chr3 (17-83)||(54113421-54113487)
chr3 (21-81)||(36987740-36987800)
chr3 (21-81)||(37013179-37013239)
chr3 (17-81)||(47719493-47719557)
chr3 (17-83)||(29500341-29500407)
chr3 (17-83)||(30269084-30269150)
chr3 (17-83)||(33932486-33932552)
chr3 (17-83)||(35906684-35906750)
chr3 (17-83)||(41990764-41990830)
chr3 (17-83)||(45599267-45599333)
chr3 (17-83)||(48545118-48545184)
chr3 (17-83)||(50739163-50739229)
chr3 (17-83)||(50773626-50773692)
chr3 (17-83)||(54510387-54510453)
chr3 (17-81)||(2909441-2909505)
chr3 (19-83)||(52461038-52461102)
chr3 (17-83)||(4018925-4018991)
chr3 (17-83)||(7265064-7265130)
chr3 (17-83)||(13337108-13337173)
chr3 (21-83)||(15496470-15496532)
chr3 (17-83)||(19536716-19536782)
chr3 (21-83)||(20996334-20996396)
chr3 (17-83)||(36592216-36592282)
chr3 (17-83)||(37413578-37413644)
chr3 (17-83)||(42187749-42187815)
chr3 (17-83)||(46850711-46850777)
chr3 (17-83)||(53022675-53022741)
chr3 (17-83)||(54203746-54203812)
chr3 (17-77)||(12996818-12996877)
chr3 (17-83)||(13450281-13450347)
chr3 (17-83)||(26881630-26881696)
chr3 (21-83)||(46088720-46088782)
chr3 (17-83)||(46757568-46757633)
chr3 (17-83)||(50933213-50933279)
chr3 (17-83)||(54195682-54195748)
chr3 (17-83)||(54741812-54741878)
chr3 (17-81)||(29450668-29450732)
chr3 (23-83)||(33899842-33899902)
chr3 (17-83)||(22347079-22347146)
chr3 (21-83)||(8238911-8238972)
chr3 (17-79)||(52674792-52674853)
chr3 (27-72)||(10617639-10617684)
chr3 (25-72)||(54835743-54835790)
chr3 (21-83)||(32754161-32754222)
chr3 (44-81)||(34433542-34433579)
chr3 (53-81)||(35529858-35529886)
[»] chr7 (45 HSPs)
chr7 (20-83)||(4400065-4400128)
chr7 (17-83)||(44651882-44651948)
chr7 (17-83)||(41343320-41343386)
chr7 (17-83)||(5526114-5526177)
chr7 (17-81)||(45620656-45620720)
chr7 (20-83)||(47840740-47840803)
chr7 (17-83)||(4406627-4406693)
chr7 (17-83)||(10999119-10999185)
chr7 (17-83)||(12907918-12907984)
chr7 (17-83)||(17278161-17278227)
chr7 (25-83)||(21134356-21134414)
chr7 (17-83)||(27031229-27031295)
chr7 (17-83)||(29448717-29448783)
chr7 (17-83)||(32960796-32960862)
chr7 (17-83)||(40239897-40239963)
chr7 (17-83)||(41426970-41427036)
chr7 (17-81)||(23639417-23639481)
chr7 (17-81)||(37669271-37669335)
chr7 (17-72)||(4615399-4615454)
chr7 (17-83)||(1448107-1448173)
chr7 (17-83)||(18956298-18956364)
chr7 (17-83)||(20482286-20482352)
chr7 (17-83)||(36769232-36769298)
chr7 (17-83)||(38045664-38045730)
chr7 (17-83)||(40789186-40789252)
chr7 (23-72)||(3840030-3840079)
chr7 (25-82)||(5483420-5483477)
chr7 (22-83)||(43156203-43156264)
chr7 (27-83)||(36765592-36765648)
chr7 (17-83)||(4408036-4408101)
chr7 (22-72)||(17816601-17816650)
chr7 (22-72)||(19050351-19050400)
chr7 (17-70)||(4404301-4404354)
chr7 (27-83)||(40036027-40036083)
chr7 (34-78)||(47171664-47171708)
chr7 (17-83)||(4492435-4492500)
chr7 (17-83)||(6607103-6607169)
chr7 (29-83)||(23154654-23154707)
chr7 (17-68)||(20762921-20762971)
chr7 (25-67)||(35910287-35910329)
chr7 (21-83)||(38049237-38049299)
chr7 (25-83)||(42828881-42828938)
chr7 (34-83)||(42915380-42915429)
chr7 (21-78)||(42995355-42995411)
chr7 (20-60)||(20135099-20135139)
[»] scaffold0198 (1 HSPs)
scaffold0198 (17-83)||(15261-15327)
[»] chr6 (28 HSPs)
chr6 (17-83)||(28472229-28472295)
chr6 (21-83)||(29043219-29043281)
chr6 (17-83)||(34247755-34247821)
chr6 (17-83)||(5414562-5414628)
chr6 (19-83)||(17505496-17505560)
chr6 (17-80)||(6018577-6018640)
chr6 (17-80)||(6833559-6833622)
chr6 (17-83)||(173062-173128)
chr6 (17-83)||(559735-559801)
chr6 (17-83)||(3850233-3850299)
chr6 (17-83)||(18593610-18593676)
chr6 (17-83)||(20791554-20791620)
chr6 (17-83)||(24046560-24046626)
chr6 (17-83)||(29859417-29859483)
chr6 (17-83)||(32244385-32244451)
chr6 (17-83)||(34207003-34207069)
chr6 (17-82)||(33945824-33945889)
chr6 (17-81)||(10945717-10945781)
chr6 (17-83)||(7541113-7541179)
chr6 (17-83)||(24162800-24162866)
chr6 (27-83)||(19988908-19988964)
chr6 (17-83)||(3053915-3053980)
chr6 (17-83)||(8866971-8867037)
chr6 (17-78)||(18314014-18314074)
chr6 (17-68)||(33976010-33976060)
chr6 (21-83)||(28231075-28231136)
chr6 (34-72)||(34319169-34319207)
chr6 (53-82)||(10943150-10943179)
[»] chr5 (62 HSPs)
chr5 (17-83)||(2530091-2530157)
chr5 (17-82)||(10042798-10042863)
chr5 (17-81)||(40506804-40506868)
chr5 (17-81)||(42416806-42416870)
chr5 (17-83)||(789026-789092)
chr5 (17-83)||(790061-790127)
chr5 (17-83)||(28746318-28746384)
chr5 (17-83)||(29874668-29874734)
chr5 (17-83)||(39803853-39803919)
chr5 (17-83)||(42110694-42110760)
chr5 (17-83)||(43396526-43396592)
chr5 (17-77)||(31958390-31958449)
chr5 (278-329)||(7499850-7499901)
chr5 (17-83)||(2475274-2475340)
chr5 (17-83)||(4374857-4374923)
chr5 (17-83)||(6928360-6928426)
chr5 (21-83)||(16166292-16166354)
chr5 (25-83)||(19361664-19361722)
chr5 (17-83)||(31884665-31884731)
chr5 (17-83)||(32261715-32261781)
chr5 (21-83)||(37147077-37147139)
chr5 (17-83)||(40308346-40308412)
chr5 (17-83)||(42111809-42111875)
chr5 (19-83)||(5589467-5589531)
chr5 (19-83)||(25821231-25821295)
chr5 (17-81)||(36088584-36088648)
chr5 (17-80)||(24027863-24027926)
chr5 (17-75)||(1060711-1060768)
chr5 (17-83)||(3246835-3246901)
chr5 (21-83)||(7536655-7536717)
chr5 (17-83)||(8314835-8314901)
chr5 (17-83)||(16050774-16050840)
chr5 (17-83)||(24758988-24759054)
chr5 (17-83)||(26379220-26379286)
chr5 (17-83)||(27176476-27176542)
chr5 (17-83)||(31939835-31939901)
chr5 (21-83)||(36083804-36083866)
chr5 (292-336)||(7499690-7499734)
chr5 (21-72)||(43354523-43354573)
chr5 (17-83)||(665562-665628)
chr5 (17-83)||(3213231-3213296)
chr5 (17-83)||(19270911-19270977)
chr5 (17-83)||(29383727-29383793)
chr5 (17-83)||(42322882-42322948)
chr5 (34-83)||(29382576-29382625)
chr5 (22-83)||(35380505-35380566)
chr5 (17-81)||(3297827-3297891)
chr5 (289-331)||(7499573-7499615)
chr5 (17-83)||(14720186-14720252)
chr5 (28-78)||(15875756-15875806)
chr5 (21-71)||(28869363-28869413)
chr5 (17-78)||(28990943-28991005)
chr5 (17-83)||(30503532-30503598)
chr5 (17-83)||(30543875-30543941)
chr5 (34-83)||(14205436-14205485)
chr5 (42-83)||(30503759-30503800)
chr5 (42-83)||(30544102-30544143)
chr5 (23-83)||(15976494-15976554)
chr5 (28-83)||(2001506-2001561)
chr5 (280-331)||(7499984-7500035)
chr5 (34-72)||(20259074-20259112)
chr5 (36-77)||(39782983-39783024)
[»] chr4 (56 HSPs)
chr4 (17-83)||(8847945-8848011)
chr4 (17-83)||(22556971-22557037)
chr4 (17-83)||(23628842-23628908)
chr4 (17-83)||(36190059-36190125)
chr4 (17-83)||(7365803-7365869)
chr4 (17-83)||(11180915-11180981)
chr4 (17-83)||(24303803-24303869)
chr4 (17-83)||(26111385-26111451)
chr4 (17-83)||(34264632-34264698)
chr4 (17-83)||(41144305-41144371)
chr4 (17-83)||(43117525-43117591)
chr4 (21-83)||(46045795-46045857)
chr4 (17-83)||(1166646-1166712)
chr4 (17-83)||(1169128-1169194)
chr4 (17-83)||(6940178-6940244)
chr4 (17-83)||(7400209-7400275)
chr4 (17-83)||(10137883-10137949)
chr4 (17-83)||(11200840-11200906)
chr4 (17-83)||(13890996-13891062)
chr4 (17-83)||(17624667-17624733)
chr4 (17-83)||(17976454-17976520)
chr4 (17-83)||(18138342-18138408)
chr4 (17-83)||(26097651-26097717)
chr4 (17-83)||(28116843-28116909)
chr4 (17-83)||(32206596-32206662)
chr4 (17-83)||(40665528-40665593)
chr4 (17-83)||(40849735-40849801)
chr4 (17-83)||(40950952-40951018)
chr4 (17-83)||(49125552-49125618)
chr4 (17-83)||(53274635-53274701)
chr4 (17-83)||(55188177-55188243)
chr4 (17-83)||(55991826-55991892)
chr4 (34-83)||(40952044-40952093)
chr4 (25-81)||(51153499-51153555)
chr4 (21-83)||(8151213-8151274)
chr4 (17-83)||(11967004-11967070)
chr4 (17-83)||(27288474-27288540)
chr4 (21-83)||(32139419-32139481)
chr4 (17-83)||(32200716-32200782)
chr4 (17-83)||(37873646-37873712)
chr4 (17-83)||(55208488-55208554)
chr4 (21-78)||(39651746-39651803)
chr4 (17-80)||(8654318-8654380)
chr4 (17-83)||(346607-346673)
chr4 (17-83)||(20681202-20681268)
chr4 (17-83)||(29099625-29099691)
chr4 (22-72)||(29346238-29346287)
chr4 (22-72)||(35832002-35832051)
chr4 (25-73)||(28361503-28361551)
chr4 (20-83)||(51187627-51187690)
chr4 (23-73)||(25881932-25881982)
chr4 (17-83)||(30071348-30071414)
chr4 (17-72)||(24631113-24631167)
chr4 (17-68)||(26926954-26927004)
chr4 (25-83)||(41986282-41986339)
chr4 (21-78)||(26871612-26871668)
[»] chr2 (31 HSPs)
chr2 (17-83)||(3243295-3243361)
chr2 (17-83)||(10120618-10120684)
chr2 (17-83)||(36078556-36078622)
chr2 (17-83)||(1117987-1118055)
chr2 (17-81)||(34912660-34912724)
chr2 (17-83)||(38879145-38879211)
chr2 (21-78)||(38709708-38709765)
chr2 (17-83)||(970962-971028)
chr2 (17-83)||(1835694-1835760)
chr2 (17-83)||(3079726-3079792)
chr2 (17-83)||(5166275-5166341)
chr2 (17-83)||(7233032-7233098)
chr2 (17-83)||(7274679-7274745)
chr2 (17-83)||(8878128-8878194)
chr2 (17-83)||(18166833-18166899)
chr2 (17-83)||(24926085-24926151)
chr2 (17-83)||(31972291-31972357)
chr2 (17-83)||(36085947-36086013)
chr2 (17-83)||(40202224-40202290)
chr2 (21-83)||(41452828-41452890)
chr2 (21-83)||(45474735-45474797)
chr2 (17-78)||(9799330-9799391)
chr2 (17-81)||(4631217-4631281)
chr2 (17-83)||(668294-668360)
chr2 (17-83)||(8683668-8683734)
chr2 (21-83)||(17032813-17032875)
chr2 (17-83)||(35423795-35423861)
chr2 (25-83)||(2180035-2180093)
chr2 (17-83)||(3324264-3324330)
chr2 (37-83)||(20313248-20313294)
chr2 (18-75)||(37522706-37522763)
[»] chr1 (51 HSPs)
chr1 (17-83)||(24473551-24473617)
chr1 (17-83)||(43119114-43119180)
chr1 (17-83)||(11754228-11754294)
chr1 (17-83)||(33818094-33818160)
chr1 (17-83)||(33877562-33877628)
chr1 (17-82)||(36952714-36952779)
chr1 (17-83)||(11583165-11583231)
chr1 (17-83)||(17585524-17585590)
chr1 (17-83)||(25659810-25659876)
chr1 (17-83)||(33373820-33373886)
chr1 (17-83)||(33642619-33642685)
chr1 (17-83)||(33895217-33895283)
chr1 (17-75)||(34652283-34652341)
chr1 (17-83)||(39327043-39327109)
chr1 (17-83)||(39879140-39879206)
chr1 (17-83)||(41901700-41901766)
chr1 (21-83)||(43123051-43123113)
chr1 (17-83)||(45104189-45104255)
chr1 (17-83)||(46040486-46040552)
chr1 (17-83)||(47037131-47037197)
chr1 (17-82)||(43120780-43120845)
chr1 (21-81)||(34078295-34078355)
chr1 (25-81)||(39729206-39729262)
chr1 (17-83)||(1322525-1322591)
chr1 (17-83)||(3265125-3265191)
chr1 (17-83)||(7833554-7833620)
chr1 (17-83)||(9574870-9574936)
chr1 (17-83)||(14487324-14487390)
chr1 (17-83)||(17249044-17249110)
chr1 (17-83)||(18091283-18091348)
chr1 (17-83)||(33831925-33831991)
chr1 (17-83)||(33894087-33894153)
chr1 (17-83)||(36165521-36165587)
chr1 (17-83)||(38802314-38802380)
chr1 (17-78)||(40432208-40432269)
chr1 (25-81)||(17366355-17366411)
chr1 (24-83)||(16097358-16097417)
chr1 (18-77)||(23730301-23730359)
chr1 (17-83)||(46588091-46588157)
chr1 (34-83)||(7308331-7308380)
chr1 (21-78)||(49223163-49223219)
chr1 (17-73)||(31638425-31638481)
chr1 (17-83)||(11606467-11606533)
chr1 (21-83)||(49571214-49571276)
chr1 (40-83)||(31215864-31215907)
chr1 (40-83)||(31221619-31221662)
chr1 (25-83)||(16033091-16033148)
chr1 (21-83)||(28568754-28568815)
chr1 (27-81)||(33932934-33932988)
chr1 (53-83)||(45589661-45589691)
chr1 (25-78)||(17670003-17670055)
[»] scaffold0024 (2 HSPs)
scaffold0024 (17-81)||(90463-90527)
scaffold0024 (36-81)||(110529-110574)
[»] scaffold0768 (1 HSPs)
scaffold0768 (17-80)||(6306-6369)
[»] scaffold0197 (1 HSPs)
scaffold0197 (17-83)||(25716-25782)
[»] scaffold0481 (2 HSPs)
scaffold0481 (17-83)||(4512-4578)
scaffold0481 (17-83)||(7456-7522)
[»] scaffold0178 (1 HSPs)
scaffold0178 (17-83)||(7292-7358)
[»] scaffold0166 (1 HSPs)
scaffold0166 (17-83)||(1482-1548)
[»] scaffold0020 (1 HSPs)
scaffold0020 (17-83)||(132665-132730)
[»] scaffold0078 (1 HSPs)
scaffold0078 (23-83)||(5732-5793)
[»] scaffold0027 (1 HSPs)
scaffold0027 (21-81)||(138031-138091)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-83)||(229101-229156)
[»] scaffold0318 (1 HSPs)
scaffold0318 (39-83)||(1083-1127)
[»] scaffold0038 (1 HSPs)
scaffold0038 (21-83)||(31572-31633)
[»] scaffold0016 (1 HSPs)
scaffold0016 (21-83)||(99393-99454)
[»] scaffold0010 (2 HSPs)
scaffold0010 (25-83)||(50262-50319)
scaffold0010 (25-83)||(57795-57852)
[»] scaffold0095 (2 HSPs)
scaffold0095 (21-78)||(236-292)
scaffold0095 (21-78)||(1726-1782)
[»] scaffold0088 (1 HSPs)
scaffold0088 (21-78)||(55402-55458)


Alignment Details
Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 38909380 - 38909464
Alignment:
Q  202 aacagatacaaaa-gtgaaaagtgtatctgtttaagttaaataaccagcttcgtacaacagaacaggcttgtttaccaggcagag 285  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38909380 aacagatacaaaaagtgaaaagtgtatctgtttaagttaaataaccagcttcgtacaacacaacaggcttgtttaccaggcagag 38909464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 38909294 - 38909360
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38909294 taataaattcaaaattttgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 38909360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 6816039 - 6816105
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  6816039 taataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 6816105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 11924775 - 11924841
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  11924775 taataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 11924841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 36059342 - 36059276
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  36059342 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 36059276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 37034832 - 37034898
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37034832 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37034898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 38139319 - 38139385
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  38139319 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 38139385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 38137785 - 38137721
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||    
T  38137785 taataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaa 38137721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 39486094 - 39486028
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  39486094 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactgtagaact 39486028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 44908503 - 44908569
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  44908503 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 44908569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 169771 - 169705
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||  |||||||||||||||||||||||||||    
T  169771 taataaattcaaagttttgtacaatattttgccaaacagtttttaacttaaaaataactttagaact 169705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 1877644 - 1877578
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||| ||||||||    
T  1877644 taataaattcaaagttttgtacaatattttgccaaacaatttttaacttaaaaataacgttagaact 1877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7219386 - 7219452
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  7219386 taataaattcaaaattttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 7219452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 16239234 - 16239168
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  16239234 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 16239168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 17046076 - 17046010
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  17046076 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17046010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 17313607 - 17313541
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  17313607 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17313541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 36216642 - 36216576
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  36216642 taataaattcaaagttttgtataatattttgccaaacaacttttaactcaaaaataactttagaact 36216576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 39525460 - 39525526
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| || ||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  39525460 taataaattcaaagttttgcacaatattttgccaaacaacttttaaattaaaaataactttagaact 39525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 39685430 - 39685496
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  39685430 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 39685496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 42844287 - 42844352
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  42844287 taataaatttaaagtt-tgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 42844352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 43818030 - 43817964
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  43818030 taataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 43817964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 44603004 - 44602938
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  44603004 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 44602938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 27467720 - 27467785
Alignment:
Q  18 aataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  27467720 aataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27467785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 12261532 - 12261469
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaac-ttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| ||||    
T  12261532 aaattcaaagttttgtacaatattttgtcaaacaactttttaacttaaaaataactttaaaact 12261469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 41526324 - 41526383
Alignment:
Q  24 ttcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||||||||||||||  || |||||||||||||||||||||||||||||||    
T  41526324 ttcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact 41526383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 2184476 - 2184410
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||| ||| || |||||||||| |||||||||||||||||    
T  2184476 taataaatttaaagttttgtacaatattttgccaaacagcttttaactttaaaataactttagaact 2184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 11579204 - 11579266
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| || |||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  11579204 aaattcaaatttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaact 11579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 14718874 - 14718940
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  14718874 taataaatttaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 14718940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 26518861 - 26518796
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| |||||||||    
T  26518861 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataa-tttagaact 26518796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 34805796 - 34805862
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||| |||||||||    
T  34805796 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 34805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 14449667 - 14449611
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  14449667 aaagttttgtacaatattttgttaaacaacttttaacataaaaataactttagaact 14449611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 9275854 - 9275901
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaa 70  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  9275854 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaa 9275901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 27877985 - 27878040
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  27877985 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 27878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 28018166 - 28018221
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  28018166 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 28018221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 2190713 - 2190647
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||| ||| || |||||||||| ||||||| |||||||||    
T  2190713 taataaatttaaagttttgtacaatattttgccaaacagcttttaacttcaaaataattttagaact 2190647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 16845035 - 16845101
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||| ||| || ||||||| | ||||||||||||||||||    
T  16845035 taataaattcaaaattttgtacaatattttgccaaacagcttttaattcaaaaataactttagaact 16845101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 34997538 - 34997604
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||  | || |||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  34997538 taataaattcctaattttgtacaatattttgccaaacaacttttaacttaaaaataactatagaact 34997604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 41360997 - 41361059
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttag 79  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||    
T  41360997 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttag 41361059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 42984002 - 42984064
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| || ||| |||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  42984002 aaattaaatgttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 42984064  T

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Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 34325870 - 34325935
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    ||||||||| ||| || | |||||||||||||||| ||||||||||||||| |||||| |||||||    
T  34325870 taataaatttaaaattttttacaatattttgtcaaacaacttttaacttaagaataaccttagaac 34325935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 1922396 - 1922454
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||| |||||||||||||||||   ||||||||| ||||||||| |||||    
T  1922396 taataaattcaaagttttgtacaatattttgtca---aacttttaatttaaaaatagcttta 1922454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 15310407 - 15310470
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaa-cttttaacttaaaaataactttagaact 83  Q
    |||||||||||| | |||||||||||| ||| ||| |||||||||||||||||| |||||||||    
T  15310407 aaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15310470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 15490776 - 15490839
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaa-cttttaacttaaaaataactttagaact 83  Q
    |||||||||||| | |||||||||||| ||| ||| |||||||||||||||||| |||||||||    
T  15490776 aaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15490839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 27914929 - 27914984
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| |||||||| ||||    
T  27914929 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27914984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 27961348 - 27961403
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| |||||||| ||||    
T  27961348 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27961403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 45139108 - 45139050
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| || |||||||||||||| | | |||||||||||||||||||||||||| ||||    
T  45139108 tcaaaattttgtacaatattttgccgaacaacttttaacttaaaaataactttaaaact 45139050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 39997991 - 39998048
Alignment:
Q  26 caaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||| |||||||| |||||  || |||||||||||| ||||||||||||||||||    
T  39997991 caaagttttgtacaattttttgctaaacaacttttaactcaaaaataactttagaact 39998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 27748864 - 27748908
Alignment:
Q  39 aatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||    
T  27748864 aatattttgccaaacaacttttaacttaaaaataactttaaaact 27748908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 30551020 - 30550970
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||| |||||||||||||||||| |||| || ||||||||    
T  30551020 taataaattcaaagtt-tgtacaatattttgtcaaacaacattaaacttaaa 30550970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 44215769 - 44215719
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||| |||||||||||||||||| |||| || ||||||||    
T  44215769 taataaattcaaagtt-tgtacaatattttgtcaaacaacattaaacttaaa 44215719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 12251539 - 12251483
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  12251539 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 12251483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 39443669 - 39443725
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  39443669 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 39443725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 40048739 - 40048678
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaag-caacttttaacttaaaaataactttagaa 81  Q
    |||||||||||| || |||||||| ||  ||  |||||||||||||||||||||||||||||    
T  40048739 aaattcaaagttttggacaatattctgcaaaaacaacttttaacttaaaaataactttagaa 40048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 41904780 - 41904829
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  41904780 tgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 41904829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 45296834 - 45296785
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  45296834 tgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 45296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 19245453 - 19245497
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||||| |||| |||||||| |||||| |||||    
T  19245453 tgtacaatattttgtcaaacaacatttaacttcaaaatagcttta 19245497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 19318637 - 19318681
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||||| |||| |||||||| |||||| |||||    
T  19318637 tgtacaatattttgtcaaacaacatttaacttcaaaatagcttta 19318681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 44655074 - 44655130
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataa 73  Q
    |||| ||||||||||| |||| || |||||| ||| |||||||| ||||||||||||    
T  44655074 taattaattcaaagttttgtataaaattttgccaaacaacttttgacttaaaaataa 44655130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 7640 - 7574
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7640 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 7574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 12101530 - 12101464
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12101530 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 12101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 35690278 - 35690212
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35690278 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 35690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7040890 - 7040956
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  7040890 taataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 7040956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 39721268 - 39721334
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39721268 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 39721334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 43316582 - 43316516
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  43316582 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 44762789 - 44762725
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  44762789 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 44762725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 48961128 - 48961192
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||    
T  48961128 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactttagaa 48961192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 14587453 - 14587387
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  14587453 taataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 14587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 20849470 - 20849404
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  20849470 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 20849404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 38361759 - 38361825
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  38361759 taataaattcaaagttttgtacaatattctgccaaacaacttttaacttaaaaataactttagaact 38361825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 46090184 - 46090118
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  46090184 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46090118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 54113421 - 54113487
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  54113421 taataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttataact 54113487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 36987800 - 36987740
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  36987800 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 36987740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 37013239 - 37013179
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  37013239 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 37013179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 47719493 - 47719557
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  47719493 taataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaa 47719557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 29500341 - 29500407
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  29500341 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 29500407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 30269150 - 30269084
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  30269150 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 30269084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 33932552 - 33932486
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| | |||||||||||||||| || ||||||||| ||||||||||||||||||    
T  33932552 taataaattcaaagttttatacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33932486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 35906750 - 35906684
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  35906750 taatcaattcaaagttttgtacaatattttgtcaaccaacttttaatttaaaaataattttagaact 35906684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 41990830 - 41990764
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  41990830 taataaatttaaagtttggtacaatattttgccaaacaacttttaacttaaaaataactttagaact 41990764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 45599333 - 45599267
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  45599333 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 45599267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 48545118 - 48545184
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||| |||||||||||| || ||||||||| ||||||||||||||||||    
T  48545118 taataaattcaaagttttgtacgatattttgtcaaacagcttttaactcaaaaataactttagaact 48545184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 50739163 - 50739229
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  50739163 taataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact 50739229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 50773692 - 50773626
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  50773692 taataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact 50773626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 54510453 - 54510387
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  54510453 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 54510387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 2909441 - 2909505
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||| ||||||||||||| || ||||||||| ||||||||||||||||    
T  2909441 taataaattcaaagttttgtataatattttgtcaaacagcttttaactcaaaaataactttagaa 2909505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 52461038 - 52461102
Alignment:
Q  19 ataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  52461038 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 52461102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 4018925 - 4018991
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  4018925 taataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 4018991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7265064 - 7265130
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||||||| |||||||| |  ||||||||| ||||||||||||||||||    
T  7265064 taataaattcaaagttttgtacaataatttgtcaaactgcttttaactcaaaaataactttagaact 7265130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 13337108 - 13337173
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||| |||||||| ||| |||| ||||||||||||||||||||||||||    
T  13337108 taataaattcaaagttttgtacgatattttgccaaacaac-tttaacttaaaaataactttagaact 13337173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 15496532 - 15496470
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| |||||| || |||||||||||||||||||||    
T  15496532 aaattcaaagttttgtacaatattttgccaaacaacttatagcttaaaaataactttagaact 15496470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 19536716 - 19536782
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| | |||||||||||| ||| |||||||||| | ||||||||||||||||||    
T  19536716 taataaattcaaagttttatacaatattttgccaaacaacttttaattcaaaaataactttagaact 19536782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 20996396 - 20996334
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| || |||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  20996396 aaattcaaaattttgtacaatattttgacaaacaacttttaatttaaaaataactttagaact 20996334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 36592282 - 36592216
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||  |||||||| ||||||||||||||||||    
T  36592282 taataaattcaaagttttgtacaatattttgacaaacagtttttaactcaaaaataactttagaact 36592216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 37413578 - 37413644
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||| ||| |||||| ||||||||||||||||||| ||||    
T  37413578 taataaattcaaaattttgtacaatattttgccaaacaacttgtaacttaaaaataactttataact 37413644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 42187815 - 42187749
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||  ||||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  42187815 taataaattttaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttataact 42187749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 46850777 - 46850711
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||||||||| ||||| ||||    
T  46850777 taataaattcaaaggtttgtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 46850711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 53022675 - 53022741
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||| | ||| || ||||||||| ||||||||||||||||||    
T  53022675 taataaattcaaagttttgtacaatatttcgccaaacagcttttaactcaaaaataactttagaact 53022741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 54203812 - 54203746
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| || ||| |||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  54203812 taataaatttaatgttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact 54203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 12996877 - 12996818
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttt 77  Q
    |||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  12996877 taataaattcaaagtt-tgtacaatatttttccaaacaacttttaacttaaaaataacttt 12996818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 13450281 - 13450347
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||||| |||||||| |||||||||    
T  13450281 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataattttagaact 13450347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 26881630 - 26881696
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| ||  |||||||| ||||||||||||||||||    
T  26881630 taataaattcaaagttttgtaaaatattttgccaaacagtttttaactcaaaaataactttagaact 26881696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 46088782 - 46088720
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| |||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  46088782 aaattaaaagttttgtacaatatttttccaaacaacttttcacttaaaaataactttagaact 46088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 46757568 - 46757633
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| | |||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  46757568 taataaattcaaagtt-tatacaatattttgccaaacagcttttaactcaaaaataactttagaact 46757633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 50933213 - 50933279
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||| || ||||||||||||||| || || ||||||||||||||||||||||| ||||    
T  50933213 taataaatttaaatttttgtacaatattttgttaaacagcttttaacttaaaaataactttataact 50933279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 54195748 - 54195682
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || ||||||||||||||||||  || ||||||||||||||||| || ||||||    
T  54195748 taataaattcaaaattttgtacaatattttgtcaaataatttttaacttaaaaataatttcagaact 54195682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 54741812 - 54741878
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||| || |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  54741812 taataaatttaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 54741878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 29450668 - 29450732
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| ||||||||||||||  || || ||||||||  ||||||||||||||||    
T  29450668 taataaattcaaagttttgtacaatattttgctaaacagcttttaacccaaaaataactttagaa 29450732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 33899842 - 33899902
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||  ||| ||||||||| ||| |||||||||||||||||||||||||| ||||    
T  33899842 attcaaagtttcgtaaaatattttgccaaacaacttttaacttaaaaataactttataact 33899902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 22347146 - 22347079
Alignment:
Q  17 taataaattcaaagttatgtacaata-ttttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||||||| |||||  || || ||||||||| ||||||||||||||||||    
T  22347146 taataaattcaaagttttgtacaatatttttgctaaacagcttttaactcaaaaataactttagaact 22347079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 8238911 - 8238972
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| |||||||||||||| ||| |||| ||||||||||||||||||||| ||||    
T  8238911 aaatttaaagtt-tgtacaatattttgccaaacaacatttaacttaaaaataactttaaaact 8238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 52674792 - 52674853
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttag 79  Q
    |||||||||||||||| |||||||||||||| ||| | | |||||||| ||||||||||||||    
T  52674792 taataaattcaaagttttgtacaatattttgccaaac-agttttaactcaaaaataactttag 52674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 10617639 - 10617684
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  10617639 aaagttttgtacaatattttgccaaacaacttttaacttaaaaata 10617684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 54835743 - 54835790
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||| || |||||||||||||| ||| ||||||||||||||||||||    
T  54835743 tcaaaattttgtacaatattttgccaaacaacttttaacttaaaaata 54835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 32754161 - 32754222
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||||||| |||  |||||||||||| || ||||| ||||    
T  32754161 aaattcaaagtt-tgtacaatattttgtcaaacaatatttaacttaaaagtagctttaaaact 32754222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 34433579 - 34433542
Alignment:
Q  44 tttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  34433579 tttgtcaaataacttttaacttaaaaataactttagaa 34433542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 35529886 - 35529858
Alignment:
Q  53 caacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||||||||||||    
T  35529886 caacttttaacttaaaaataactttagaa 35529858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 4400128 - 4400065
Alignment:
Q  20 taaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4400128 taaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 4400065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 44651948 - 44651882
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  44651948 taataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaact 44651882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 41343386 - 41343320
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  41343386 taataaattcaaagttttgtacaatattttgccaaacaacatttaacttaaaaataactttagaact 41343320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 5526114 - 5526177
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||    
T  5526114 taataaattcaaagttttgtacaatattttgtca---aacttttaacttaaaaataactttagaact 5526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 45620656 - 45620720
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||    
T  45620656 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 45620720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 47840740 - 47840803
Alignment:
Q  20 taaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  47840740 taaattcaaagttttgtacaatattttgccaaacaactttcaacttaaaaataactttagaact 47840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 4406693 - 4406627
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||| |||||    
T  4406693 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaattaactttggaact 4406627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 10999119 - 10999185
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  10999119 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10999185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 12907918 - 12907984
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  12907918 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 12907984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 17278161 - 17278227
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  17278161 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17278227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 21134414 - 21134356
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  21134414 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 21134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 27031295 - 27031229
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  27031295 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27031229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 29448783 - 29448717
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  29448783 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 29448717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 32960862 - 32960796
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  32960862 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 32960796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 40239963 - 40239897
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  40239963 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 40239897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 41426970 - 41427036
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  41426970 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 41427036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 23639481 - 23639417
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||    
T  23639481 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 23639417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 37669335 - 37669271
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||    
T  37669335 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 37669271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 4615399 - 4615454
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  4615399 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaata 4615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 1448107 - 1448173
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||| ||||||||||    
T  1448107 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaatagctttagaact 1448173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 18956364 - 18956298
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  18956364 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 18956298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 20482286 - 20482352
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||| ||||||| ||||||| ||||    
T  20482286 taataaattcaaagttttgtacaatattttgccaaacaacttttaaattaaaaaaaactttaaaact 20482352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 36769232 - 36769298
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||  ||||||| ||| |||||||||||||||||||||||||||||||    
T  36769232 taataaatttaaagttttgtactttattttgccaaacaacttttaacttaaaaataactttagaact 36769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 38045664 - 38045730
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| | |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  38045664 taataaattcaaagctttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 38045730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 40789186 - 40789252
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||| ||||    
T  40789186 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttataact 40789252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 3840030 - 3840079
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3840030 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaata 3840079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 5483420 - 5483477
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  5483420 tcaaagttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaac 5483477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 43156203 - 43156264
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  43156203 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 43156264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 36765592 - 36765648
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| |||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  36765592 aaagttttgtactttattttgtcaaacaacttttaacttaaaaataactttagaact 36765648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 4408101 - 4408036
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| | |||||||||||| ||| || ||||||||||||||||||||||| ||||    
T  4408101 taataaattcaaagtt-tatacaatattttgccaaacagcttttaacttaaaaataactttaaaact 4408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 17816601 - 17816650
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  17816601 aattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 17816650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 19050400 - 19050351
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  19050400 aattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 19050351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 4404301 - 4404354
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaa 70  Q
    |||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||    
T  4404301 taataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaa 4404354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 40036083 - 40036027
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| |||||||||||||| |||  ||||||||||||||||||||||||| ||||    
T  40036083 aaagttttgtacaatattttgccaaaaaacttttaacttaaaaataactttaaaact 40036027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 47171664 - 47171708
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  47171664 tgtacaatattttgtcaagcaacatttaacttaaaaatagcttta 47171708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 4492500 - 4492435
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| |||  ||||||||| || |||||||| ||||||||    
T  4492500 taataaattcaaagttttgtacaatattttgccaaataacttttaa-tttaaaataaccttagaact 4492435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 6607103 - 6607169
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||| ||||||||| ||| ||  ||||||||||||||||| |||||||||    
T  6607103 taataaatttaaagttttgtataatattttgccaaacagattttaacttaaaaataaatttagaact 6607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 23154654 - 23154707
Alignment:
Q  29 agttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  23154654 agttttgtacaatattttgccaaacaacttttaactt-aaaataactttagaact 23154707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 20762921 - 20762971
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||| |||||||||||||||||| |||| || ||||||||    
T  20762921 taataaattcaaagtt-tgtacaatattttgtcaaacaacattaaacttaaa 20762971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 35910287 - 35910329
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaa 67  Q
    |||||||| |||| ||||||||||||| |||||||||||||||    
T  35910287 tcaaagttttgtataatattttgtcaaacaacttttaacttaa 35910329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 38049299 - 38049237
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| |||||||||||||  ||| |||||||||| |||||||||| |||| ||||    
T  38049299 aaattaaaagttgtgtacaatattttaccaaacaacttttaatttaaaaataattttaaaact 38049237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 42828938 - 42828881
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| || ||||| ||||    
T  42828938 tcaaagtt-tgtacaatattttgtcaaacaacatttaacttaaaagtagctttaaaact 42828881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 42915380 - 42915429
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  42915380 tgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 42915429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 42995355 - 42995411
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  42995355 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 42995411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 20135139 - 20135099
Alignment:
Q  20 taaattcaaagttatgtacaatattttgtcaagcaactttt 60  Q
    ||||||||||||| |||||||||||||| ||| ||||||||    
T  20135139 taaattcaaagttttgtacaatattttgccaaacaactttt 20135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 15327 - 15261
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  15327 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 15261  T

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Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 28472229 - 28472295
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  28472229 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 28472295  T

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Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 29043219 - 29043281
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  29043219 aaattcaaagttatgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 29043281  T

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Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 34247821 - 34247755
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  34247821 taataaattcaaagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact 34247755  T

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Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 5414628 - 5414562
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5414628 taataaattaaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 5414562  T

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Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 17505496 - 17505560
Alignment:
Q  19 ataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| |||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  17505496 ataaattcaaagttttgtataatattttatcaaacaacttttaacttaaaaataactttagaact 17505560  T

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Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 6018640 - 6018577
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    ||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  6018640 taataaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaga 6018577  T

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Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 6833559 - 6833622
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  6833559 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaga 6833622  T

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Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 173128 - 173062
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  173128 taataaatacaaagttttgtataatattttgtcaaacaacttttaacttaaaaataattttagaact 173062  T

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Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 559735 - 559801
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  559735 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 559801  T

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Target: chr6; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 3850233 - 3850299
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  3850233 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 3850299  T

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Target: chr6; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 18593676 - 18593610
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  18593676 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 18593610  T

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Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 20791554 - 20791620
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  20791554 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 20791620  T

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Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 24046626 - 24046560
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  24046626 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24046560  T

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Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 29859417 - 29859483
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||  ||||||||    
T  29859417 taataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaataagcttagaact 29859483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 32244385 - 32244451
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||| |||||||    
T  32244385 taataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactgtagaact 32244451  T

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Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 34207069 - 34207003
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  34207069 taataaattcaaaattttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 34207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 33945889 - 33945824
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||||||||||    
T  33945889 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 33945824  T

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Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 10945717 - 10945781
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||| ||||||||| ||| |||||||||||||| ||||||||||||||    
T  10945717 taataaattcaaagttttgtataatattttgccaaacaacttttaacttagaaataactttagaa 10945781  T

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Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7541113 - 7541179
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| || ||| ||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  7541113 taataaattgaatgttttgtacaacattttgccaaacaacttttaacttaaaaataactttagaact 7541179  T

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Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 24162800 - 24162866
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||| ||||||||| ||| |||||||| ||||||||||||||||||||||    
T  24162800 taataaattcaaaattttgtataatattttgccaaacaactttttacttaaaaataactttagaact 24162866  T

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Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 19988908 - 19988964
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| |||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  19988908 aaagttttgtacaatattttgccacacaacttttaacttaaaaataactttagaact 19988964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 3053980 - 3053915
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  3053980 taataaatttaaagtt-tgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 3053915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 8866971 - 8867037
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| |   |||||||||||| ||| |||||||||||||||||||| ||||| ||||    
T  8866971 taataaattcaaagcttcatacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 8867037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 18314014 - 18314074
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||| |||||||||||||| ||  |||| ||||| |||||||||||||||    
T  18314014 taataaattcaaagtt-tgtacaatattttgccacacaacatttaaattaaaaataacttta 18314074  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 33976010 - 33976060
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||| |||| ||||||||||||| |||| |||||||||||    
T  33976010 taataaattcaaagtt-tgtataatattttgtcaaacaacatttaacttaaa 33976060  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 28231136 - 28231075
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| || ||||||||||| ||| |||| |||||||||||| |||||||| ||||    
T  28231136 aaattcaaagtt-tgcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 28231075  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 34319169 - 34319207
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  34319169 tgtacaatattttgtcaaacaacatttaacttaaaaata 34319207  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 82
Target Start/End: Complemental strand, 10943179 - 10943150
Alignment:
Q  53 caacttttaacttaaaaataactttagaac 82  Q
    ||||||||||||||||||||||||||||||    
T  10943179 caacttttaacttaaaaataactttagaac 10943150  T

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Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 2530091 - 2530157
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2530091 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 2530157  T

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Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 10042798 - 10042863
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  10042798 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttcagaac 10042863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 40506868 - 40506804
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  40506868 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttaagaa 40506804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 42416806 - 42416870
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    
T  42416806 taataaattcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa 42416870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 789092 - 789026
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  789092 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttagaact 789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 790127 - 790061
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  790127 taataaattcatagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact 790061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 28746384 - 28746318
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  28746384 taataaattcaaagttttatacaatattttgccaaacaacttttaacttaaaaataactttagaact 28746318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 29874734 - 29874668
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||    
T  29874734 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactatagaact 29874668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 39803919 - 39803853
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  39803919 taataaattcaaagttttgtacaatattttgccaaacaacgtttaacttaaaaataactttagaact 39803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 42110694 - 42110760
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  42110694 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 42110760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 43396526 - 43396592
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  43396526 taataaattcaaagttttgtacaatattttgccaaacaacttctaacttaaaaataactttagaact 43396592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 31958449 - 31958390
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttt 77  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  31958449 taataaattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaataacttt 31958390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 7499850 - 7499901
Alignment:
Q  278 aggcagagagggaggaagaagcagctagaaggcaacaagaggagagggaaag 329  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7499850 aggcagagagtgaggaagaagcagctagaaggcaacaagaggagagggaaag 7499901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 2475340 - 2475274
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  2475340 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 2475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 4374923 - 4374857
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||| ||| ||| |||||||||||| ||||||||||||||||||    
T  4374923 taataaattcaaagttttgtacaatatcttgccaaacaacttttaactcaaaaataactttagaact 4374857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 6928426 - 6928360
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  6928426 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 16166354 - 16166292
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  16166354 aaattcaaagttttgtacaatattttgtcaaataacttttaacttaaaaataattttagaact 16166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 19361664 - 19361722
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  19361664 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 19361722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 31884731 - 31884665
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  31884731 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 31884665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 32261781 - 32261715
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||||||||||| |||| || ||||||||| ||||||||||||||||||    
T  32261781 taataaattcaaagttttgtacaatattttatcaaacagcttttaactcaaaaataactttagaact 32261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 37147077 - 37147139
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37147077 aaattcgaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37147139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 40308346 - 40308412
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||    
T  40308346 taataaattcaaagttttgtacactattttgccaaacagcttttaacttaaaaataactttagaact 40308412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 42111875 - 42111809
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||| ||||    
T  42111875 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaacaataactttataact 42111809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 5589531 - 5589467
Alignment:
Q  19 ataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||| || |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  5589531 ataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 5589467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 25821231 - 25821295
Alignment:
Q  19 ataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  25821231 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25821295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 36088584 - 36088648
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| || ||||||||||||||| || ||||| ||||||||||||||||||||    
T  36088584 taataaattcaaagttttgaacaatattttgtcaaacagctttttacttaaaaataactttagaa 36088648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 24027926 - 24027863
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||||||||    
T  24027926 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaga 24027863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 1060711 - 1060768
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataact 75  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  1060711 taataaattcaaagtt-tgtacaatattttgtcaaacaatttttaacttaaaaataact 1060768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 3246835 - 3246901
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| || ||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  3246835 taataaatttaatgttttgtacaatattttgccaaacaacttgtaacttaaaaataactttagaact 3246901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 7536655 - 7536717
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| ||| ||||||||||||||  || |||||||||||||||||||||||||||||||    
T  7536655 aaattcaatgttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact 7536717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 8314835 - 8314901
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| |||||||||  || ||||||||||||||||||||| |||||||||    
T  8314835 taataaattcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataattttagaact 8314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 16050840 - 16050774
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  16050840 taataatttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 16050774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 24758988 - 24759054
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  24758988 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 24759054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 26379220 - 26379286
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  26379220 taataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 26379286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 27176542 - 27176476
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| |||  | ||||||||| ||||||||||||||||||    
T  27176542 taataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact 27176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 31939901 - 31939835
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |  ||||||||| ||||||||||||||||||    
T  31939901 taataaattcaaagttttgtacaatattttgccaaactgcttttaactcaaaaataactttagaact 31939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 36083804 - 36083866
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  36083804 aaattcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact 36083866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 7499690 - 7499734
Alignment:
Q  292 gaagaagcagctagaaggcaacaagaggagagggaaaggaaagag 336  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  7499690 gaagcagcagctagaaggcaacaagaggagagggaaaggaaagag 7499734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 43354523 - 43354573
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  43354523 aaattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 43354573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 665628 - 665562
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| | | || ||||||||| ||||||||||||||||||    
T  665628 taataaattcaaagttttgtataatattttgccgaacagcttttaactcaaaaataactttagaact 665562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 3213296 - 3213231
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||| |||||| ||||| ||||    
T  3213296 taataaattcaaagtt-tgtacaatattttgtcaaacaacatttaactttaaaatagctttaaaact 3213231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 19270911 - 19270977
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  19270911 taataaattcaaagttttgtataatattttgccaaacaacctttaacttaaaaatagctttaaaact 19270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 29383793 - 29383727
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| | |||||| ||||||||| || ||||||||| |||||||||| |||||||    
T  29383793 taataaattcaaagttttttacaatgttttgtcaaacagcttttaactcaaaaataactatagaact 29383727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 42322882 - 42322948
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||   || || ||||||||| ||||||||||||||||||    
T  42322882 taataaattcaaagttttgtacaatattttacgaaacagcttttaactcaaaaataactttagaact 42322948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 29382625 - 29382576
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  29382625 tgtactatattttgccaaacaacttttaacttaaaaataactttagaact 29382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 35380566 - 35380505
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||| ||| |||| ||||||||| ||| ||||||||||||||||| |||||||||||||    
T  35380566 aattcaatgttttgtataatattttgccaaacaacttttaacttaaaattaactttagaact 35380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 3297891 - 3297827
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| | |||| ||||||| ||| || ||||||||| ||||||||||||||||    
T  3297891 taataaattcaaagttttatacattattttgccaaacagcttttaactcaaaaataactttagaa 3297827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 7499573 - 7499615
Alignment:
Q  289 gaggaagaagcagctagaaggcaacaagaggagagggaaagga 331  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  7499573 gaggaagaagcagctagaagacaacaagaagagagggaaagga 7499615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 14720186 - 14720252
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||  ||| |||||| || |||||||||| ||||| ||||    
T  14720186 taataaattcaaagttttgtacaatattttcccaaacaacttctatcttaaaaatagctttaaaact 14720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 15875806 - 15875756
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    ||||| ||||||||||||||  || ||||||||||||||||||||||||||    
T  15875806 aagttttgtacaatattttgctaaacaacttttaacttaaaaataacttta 15875756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 28869363 - 28869413
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaat 71  Q
    ||||| ||| || |||||||||||||||||| |||||||||||||||||||    
T  28869363 aaatttaaatttttgtacaatattttgtcaaacaacttttaacttaaaaat 28869413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 28991005 - 28990943
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaac-ttttaacttaaaaataacttta 78  Q
    |||||||||||||||| |||||||||||||| ||| |||| |||||||| ||||||| |||||    
T  28991005 taataaattcaaagttttgtacaatattttgccaaacaactttttaactaaaaaatagcttta 28990943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 30503598 - 30503532
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||| || ||||||||||||||  ||  || |||||||||||||||||||||||||||    
T  30503598 taataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact 30503532  T

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Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 30543941 - 30543875
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||| || ||||||||||||||  ||  || |||||||||||||||||||||||||||    
T  30543941 taataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact 30543875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 14205436 - 14205485
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||| ||| |||||||||| ||||||||||||||||||||    
T  14205436 tgtataatattttgccaaacaacttttaaattaaaaataactttagaact 14205485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 30503800 - 30503759
Alignment:
Q  42 attttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  30503800 attttgccaaacaacttttaacttaaaaataactttagaact 30503759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 30544143 - 30544102
Alignment:
Q  42 attttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  30544143 attttgccaaacaacttttaacttaaaaataactttagaact 30544102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 15976494 - 15976554
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| | |||||||||||||| ||| || ||||||||| |||||||| |||||||||    
T  15976494 attcaaagatttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 15976554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 2001506 - 2001561
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| ||||||  ||| |||||||||||||||||||||||||| ||||    
T  2001506 aagttttgtacagtattttaccaaacaacttttaacttaaaaataactttaaaact 2001561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 7499984 - 7500035
Alignment:
Q  280 gcagagagggaggaagaagcagctagaaggcaacaagaggagagggaaagga 331  Q
    |||||| |||||||||||||||| ||||| ||||||||| |||| |||||||    
T  7499984 gcagagggggaggaagaagcagcaagaagacaacaagagaagagagaaagga 7500035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 20259074 - 20259112
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  20259074 tgtacaatattttgtcaaacaatttttaacttaaaaata 20259112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 39782983 - 39783024
Alignment:
Q  36 tacaatattttgtcaagcaacttttaacttaaaaataacttt 77  Q
    |||||||||||| ||| |||||||||||| ||||||||||||    
T  39782983 tacaatattttgccaaacaacttttaactgaaaaataacttt 39783024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 8847945 - 8848011
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8847945 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 8848011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 22556971 - 22557037
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  22556971 taataaattcaaagttttgtaaaatattttgtcaaacaacttttaacttaaaaataactttagaact 22557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 23628842 - 23628908
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  23628842 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 23628908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 36190125 - 36190059
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  36190125 taataaattcaaagttttgtacaatattttgtcaaacaacttttaactcaaaaataactttagaact 36190059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7365803 - 7365869
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  7365803 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 7365869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 11180915 - 11180981
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| ||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  11180915 taataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 11180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 24303869 - 24303803
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  24303869 taataaattcaaagttttgtacaatattttgccaaataacttttaacttaaaaataactttagaact 24303803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 26111385 - 26111451
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  26111385 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 26111451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 34264698 - 34264632
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  34264698 taataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 34264632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 41144371 - 41144305
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  41144371 taataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaact 41144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 43117525 - 43117591
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  43117525 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaacaactttagaact 43117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 46045857 - 46045795
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  46045857 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 46045795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 1166646 - 1166712
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  1166646 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 1169128 - 1169194
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  1169128 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1169194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 6940244 - 6940178
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  6940244 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6940178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 7400275 - 7400209
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  7400275 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7400209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 10137949 - 10137883
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  10137949 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 11200840 - 11200906
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  11200840 taataaattcaaaattttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 11200906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 13891062 - 13890996
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  13891062 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 13890996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 17624667 - 17624733
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  17624667 taataaattcaaagttttgtataatattttgccaaacagcttttaacttaaaaataactttagaact 17624733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 17976454 - 17976520
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||| |||||||||    
T  17976454 taataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact 17976520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 18138342 - 18138408
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||||||||| || |||  ||||||||||||||||||||||||||||||    
T  18138342 taataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 18138408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 26097717 - 26097651
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||| ||||    
T  26097717 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttcaaaataactttaaaact 26097651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 28116909 - 28116843
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  28116909 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 28116843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 32206662 - 32206596
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  32206662 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 32206596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 40665528 - 40665593
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || | ||||||||||||||||||||||||||    
T  40665528 taataaattcaaagttttgtacaatattttgtcaaacagc-tttaacttaaaaataactttagaact 40665593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 40849735 - 40849801
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||| ||||    
T  40849735 taataaattcaaagttttgtacaatattttgacaaacaatttttaacttaaaaataactttataact 40849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 40950952 - 40951018
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  40950952 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 40951018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 49125552 - 49125618
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||||||||| || |||  ||||||||||||||||||||||||||||||    
T  49125552 taataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 49125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 53274635 - 53274701
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  53274635 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 53274701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 55188177 - 55188243
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  55188177 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 55188243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 55991826 - 55991892
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| |||||||| |||||||||    
T  55991826 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataattttagaact 55991892  T

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Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 40952044 - 40952093
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40952044 tgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 40952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 51153499 - 51153555
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  51153499 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 51153555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 8151213 - 8151274
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  8151213 aaattcaaagttttgtacaa-attttgtcaaacaacttttaacttaaaaataattttagaact 8151274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 11967070 - 11967004
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||| |||||||||    
T  11967070 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 11967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 27288540 - 27288474
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  27288540 taataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27288474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 32139419 - 32139481
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||| ||||    
T  32139419 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaaaact 32139481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 32200782 - 32200716
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||||||||||| || ||| |||||||||| ||||||||||||||| ||||    
T  32200782 taataaattcaaagttttgtacaatattctgccaaacaacttttaatttaaaaataactttaaaact 32200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 37873712 - 37873646
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||  || |||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  37873712 taataaattcaactttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact 37873646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 55208554 - 55208488
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||| |||||||    
T  55208554 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactgtagaact 55208488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 39651746 - 39651803
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||    
T  39651746 aaattcaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttta 39651803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 8654380 - 8654318
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    |||||||||||||||| |||||||||||| | ||| ||| ||||||||||||||||||||||||    
T  8654380 taataaattcaaagttttgtacaatattt-gccaaacaatttttaacttaaaaataactttaga 8654318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 346673 - 346607
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| ||| ||||||||| |||| |||  |||||||||||||| |||||||||||||||    
T  346673 taataaattcaatgttttgtacaatagtttgccaaagaacttttaacttaacaataactttagaact 346607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 20681202 - 20681268
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||  ||||||||||||  ||| |||||||||||||||||||||||||| ||||    
T  20681202 taataaattcaatgtttcgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 20681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 29099691 - 29099625
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| | |||||||||||| ||| |||||||||||| ||||||||||||| ||||    
T  29099691 taataaatttaaagttttatacaatattttgccaaacaacttttaactgaaaaataactttacaact 29099625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 29346287 - 29346238
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  29346287 aattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 29346238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 35832051 - 35832002
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  35832051 aattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 35832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 28361551 - 28361503
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataa 73  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  28361551 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataa 28361503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 51187627 - 51187690
Alignment:
Q  20 taaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||| || |||||| |||| || ||| |||||||||||||||||||||||| ||||||    
T  51187627 taaattcaaaattttgtacattattctgccaaacaacttttaacttaaaaataacttcagaact 51187690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 25881932 - 25881982
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataa 73  Q
    |||||||||| ||||||||||||||  || |||||||||||||||||||||    
T  25881932 attcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataa 25881982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 30071348 - 30071414
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| ||||| |||||||| ||| ||||||| || ||||||||||||||| ||||    
T  30071348 taataaatttaaagttttgtacgatattttgccaaacaactttaaagttaaaaataactttataact 30071414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 24631167 - 24631113
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||||||| || |||||||||||  ||| ||||||||||||||||||||    
T  24631167 taataaattcaaagt-atttacaatatttttccaaacaacttttaacttaaaaata 24631113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 26927004 - 26926954
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||| |||||||||||||||||| |||| || ||||||||    
T  26927004 taataaattcaaagtt-tgtacaatattttgtcaaacaacattaaacttaaa 26926954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 41986339 - 41986282
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| || ||||| ||||    
T  41986339 tcaaagtt-tgtacaatattttgtcaaacaacgtttaacttaaaattagctttaaaact 41986282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 26871668 - 26871612
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  26871668 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 26871612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 3243361 - 3243295
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  3243361 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 3243295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 10120618 - 10120684
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10120618 taataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 10120684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 36078622 - 36078556
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  36078622 taataaattcaaagttttgtacaatattttgtcaaacaccttttaacttaaaaataactttagaact 36078556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 1117987 - 1118055
Alignment:
Q  17 taataaattcaaagtta--tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1117987 taataaattcaaagttacatgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 1118055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 34912660 - 34912724
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  34912660 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 34912724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 38879145 - 38879211
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  38879145 taataaattcaaagttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 38879211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 38709708 - 38709765
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  38709708 aaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttta 38709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 970962 - 971028
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  970962 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 971028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 1835694 - 1835760
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  1835694 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1835760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 3079726 - 3079792
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||| |||||||||    
T  3079726 taataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact 3079792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 5166275 - 5166341
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  5166275 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 5166341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7233032 - 7233098
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  7233032 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7233098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7274679 - 7274745
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  7274679 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7274745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 8878128 - 8878194
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  8878128 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 8878194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 18166899 - 18166833
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  18166899 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 18166833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 24926151 - 24926085
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  24926151 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24926085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 31972291 - 31972357
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  31972291 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 31972357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 36086013 - 36085947
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  36086013 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 36085947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 40202224 - 40202290
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||| | | |||||||||||||||||||||||||||||||    
T  40202224 taataaatttaaagttttgtacaatattttgcctaacaacttttaacttaaaaataactttagaact 40202290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 41452828 - 41452890
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  41452828 aaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 41452890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 45474735 - 45474797
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  45474735 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaact 45474797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 9799391 - 9799330
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||    
T  9799391 taataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaacaacttta 9799330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 4631217 - 4631281
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||    
T  4631217 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 4631281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 668360 - 668294
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || ||| |||||||||| ||| |||||||||| ||||||||||||||||||||    
T  668360 taataaattcaaaattttgtgcaatattttgccaaacaacttttaatttaaaaataactttagaact 668294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 8683668 - 8683734
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||| ||||| ||| || ||||||||| ||||||||||||||||||    
T  8683668 taataaattcaaagttttgtacaattttttgccaaacagcttttaactcaaaaataactttagaact 8683734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 17032875 - 17032813
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  17032875 aaattccaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 17032813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 35423795 - 35423861
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| ||||||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  35423795 taataaatttaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttaagaact 35423861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 2180035 - 2180093
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||| |||||||||  || |||||||||||||||||||||||||||||||    
T  2180035 tcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataactttagaact 2180093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 3324330 - 3324264
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| |||||||||  || || ||||||||| ||||||||||||||||||    
T  3324330 taataaattcaaagttttgtataatattttgcgaaacagcttttaactcaaaaataactttagaact 3324264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 20313294 - 20313248
Alignment:
Q  37 acaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  20313294 acaatattttgccaaacagcttttaactcaaaaataactttagaact 20313248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 37522706 - 37522763
Alignment:
Q  18 aataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataact 75  Q
    |||||| ||||| || ||||||| |||||| ||| ||| |||||||||||||||||||    
T  37522706 aataaaatcaaaattttgtacaacattttgccaaacaaattttaacttaaaaataact 37522763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 24473617 - 24473551
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  24473617 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 24473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 43119180 - 43119114
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  43119180 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43119114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 11754294 - 11754228
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  11754294 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 11754228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 33818160 - 33818094
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  33818160 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33818094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 33877628 - 33877562
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  33877628 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33877562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 36952779 - 36952714
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  36952779 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaac 36952714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 11583165 - 11583231
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  11583165 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 11583231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 17585524 - 17585590
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  17585524 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17585590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 25659876 - 25659810
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  25659876 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25659810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 33373886 - 33373820
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33373886 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33373820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 33642619 - 33642685
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33642619 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33642685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 33895283 - 33895217
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33895283 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33895217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 34652283 - 34652341
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataact 75  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||    
T  34652283 taataaattcaaaattttgtacaatattttgtcaaacaacttttaacttaaaaataact 34652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 39327109 - 39327043
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  39327109 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 39327043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 39879206 - 39879140
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| ||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  39879206 taataaattcaatgttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 39879140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 41901766 - 41901700
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  41901766 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 41901700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 43123051 - 43123113
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  43123051 aaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 43123113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 45104189 - 45104255
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  45104189 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 45104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 46040552 - 46040486
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  46040552 taataaattcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 47037197 - 47037131
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  47037197 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 47037131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 43120845 - 43120780
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||||||||||    
T  43120845 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 43120780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 34078295 - 34078355
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  34078295 aaattcaaagttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaa 34078355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 39729262 - 39729206
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    
T  39729262 tcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa 39729206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 1322591 - 1322525
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| ||| |||||||||||||  ||| |||||||||| ||||||||||||||||||||    
T  1322591 taataaattcaatgttttgtacaatattttaccaaacaacttttaatttaaaaataactttagaact 1322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 3265125 - 3265191
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| | |||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  3265125 taataaattcaaagttttatacaatattttgccaaacagcttttaactcaaaaataactttagaact 3265191  T

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Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7833554 - 7833620
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| ||  |||||||| ||||||||||||||||||    
T  7833554 taataaattcaaagttttgtacaatattttgccaaacagtttttaactcaaaaataactttagaact 7833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 9574870 - 9574936
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| | | || ||||||||| ||||||||||||||||||    
T  9574870 taataaattcaaagttttgtacaatattttgccgaacagcttttaactcaaaaataactttagaact 9574936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 14487390 - 14487324
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||  ||| || ||||||||| ||||||||||||||||||    
T  14487390 taataaattcaaagttttgtacaatatttttccaaacagcttttaactcaaaaataactttagaact 14487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 17249044 - 17249110
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||| |||||||| |||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  17249044 taataaaatcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact 17249110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 18091283 - 18091348
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||| ||||| ||||    
T  18091283 taataaattcaaagtt-tgtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 33831991 - 33831925
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||  |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33831991 taataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 33894153 - 33894087
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||  |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33894153 taataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33894087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 36165587 - 36165521
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| |||  | ||||||||| ||||||||||||||||||    
T  36165587 taataaattcaaagttttgtacaatattttgccaaaaagcttttaactcaaaaataactttagaact 36165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 38802314 - 38802380
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  38802314 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 38802380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 40432269 - 40432208
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||||||    
T  40432269 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 40432208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 17366411 - 17366355
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||    
T  17366411 tcaaagttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaa 17366355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 16097358 - 16097417
Alignment:
Q  24 ttcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||||||||||| ||| || |||||||||||||||||| |||||||||    
T  16097358 ttcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataattttagaact 16097417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 23730359 - 23730301
Alignment:
Q  18 aataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttt 77  Q
    ||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  23730359 aataatttcaaagtt-tgtacaatattttgccaaacaacttttaacttaaaaataacttt 23730301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 46588157 - 46588091
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| | || ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  46588157 taataaattcaaagttttatataatattttgccaaacagcttttaactcaaaaataactttagaact 46588091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 7308380 - 7308331
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  7308380 tgtacaatattttgccaaacaacttttaacttaaaaataacattagaact 7308331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 49223163 - 49223219
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||||||| |||||    
T  49223163 aaattcaaagtt-tgtacaatattttgtcaaacaacatttaacttaaaaatagcttta 49223219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 31638481 - 31638425
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataa 73  Q
    |||| ||||||||||| |||| ||||||||| ||| |||||||||||||||||||||    
T  31638481 taattaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataa 31638425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 11606533 - 11606467
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||| ||| |||||||||| ||| ||||| ||||| ||||    
T  11606533 taataaatttaaagttttgtacaatattttgccaaacaacttttaatttagaaatagctttaaaact 11606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 49571214 - 49571276
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| ||||||||||| |||||| ||| || |||| |||||||||||||||||||    
T  49571214 aaatttaaagttttgtacaatattgtgtcaaacaaattataacataaaaataactttagaact 49571276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 31215907 - 31215864
Alignment:
Q  40 atattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||    
T  31215907 atattttgccaaacaacttttaactcaaaaataactttagaact 31215864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 31221662 - 31221619
Alignment:
Q  40 atattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||    
T  31221662 atattttgccaaacaacttttaactcaaaaataactttagaact 31221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 16033148 - 16033091
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| || ||||| ||||    
T  16033148 tcaaagtt-tgtacaatattttgtcaaacaacatttaacttaaaagtagctttaaaact 16033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 28568815 - 28568754
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||| |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  28568815 aaatccaaagtt-tgtacaatattttgccaaacaacatttaacttaaaaatatctttaaaact 28568754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 33932934 - 33932988
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||| ||||  |||||||| ||| |||||||||| ||||||||||||||||||    
T  33932934 aaagttttgtatgatattttgccaaacaacttttaatttaaaaataactttagaa 33932988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 83
Target Start/End: Original strand, 45589661 - 45589691
Alignment:
Q  53 caacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||||||||||||||    
T  45589661 caacttttaacttaaaaataactttagaact 45589691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 17670003 - 17670055
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||| |||||||||||||| ||| |||| |||||||||||| ||||||||    
T  17670003 tcaaagtt-tgtacaatattttgccaaacaacatttaacttaaaagtaacttta 17670055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 90527 - 90463
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||    
T  90527 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 90463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 110574 - 110529
Alignment:
Q  36 tacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    ||||||||||||  || |||||||||||||||||||||||||||||    
T  110574 tacaatattttgctaaacaacttttaacttaaaaataactttagaa 110529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 6369 - 6306
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  6369 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaga 6306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 25716 - 25782
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  25716 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 4578 - 4512
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||| | ||| || ||||||||| ||||||||||||||||||    
T  4578 taataaattcaaagttttgtacaatatttggccaaacagcttttaactcaaaaataactttagaact 4512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 7456 - 7522
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||| ||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  7456 taataaattctaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 7358 - 7292
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| |||  | ||||||||| ||||||||||||||||||    
T  7358 taataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact 7292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 1482 - 1548
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  1482 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 132665 - 132730
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| | |||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  132665 taataaattgaaagtt-tatacaatattttgccaaacaacttttaaattaaaaataactttagaact 132730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 5793 - 5732
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaa-aaataactttagaact 83  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||| ||||    
T  5793 attcaaagttttgtacaatatcttgtcaaacaacttttaacttaataaataactttaaaact 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 138091 - 138031
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||  ||| ||||||||||  || |||||||||||||||||||||||||||||    
T  138091 aaattcaaagtcttgtgcaatattttgctaaacaacttttaacttaaaaataactttagaa 138031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 229101 - 229156
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||  ||| |||||||||||||||||||||||||| ||||    
T  229101 aagttttgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 229156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 1083 - 1127
Alignment:
Q  39 aatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||    
T  1083 aatattttgccaaacaacttttaacttaaaaataactttaaaact 1127  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 31633 - 31572
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| || ||||||||||| ||| |||| |||||||||||| |||||||| ||||    
T  31633 aaattcaaagtt-tgcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 31572  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 99393 - 99454
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||||||| |||  |||||||||||| || ||||| ||||    
T  99393 aaattcaaagtt-tgtacaatattttgtcaaacaatatttaacttaaaagtagctttaaaact 99454  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 50262 - 50319
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| ||||| ||||||||| ||||| ||||    
T  50262 tcaaagtt-tgtacaatattttgtcaaacaacatttaatttaaaaatagctttaaaact 50319  T

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Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 57795 - 57852
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| ||||| ||||||||| ||||| ||||    
T  57795 tcaaagtt-tgtacaatattttgtcaaacaacatttaatttaaaaatagctttaaaact 57852  T

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Target: scaffold0095 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 236 - 292
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  236 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 292  T

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Target: scaffold0095; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 1726 - 1782
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  1726 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 1782  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 55458 - 55402
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  55458 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 55402  T

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