View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0673_high_20 (Length: 342)

Name: NF0673_high_20
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0673_high_20
NF0673_high_20
[»] chr8 (60 HSPs)
chr8 (202-285)||(38909380-38909464)
chr8 (8-83)||(11924766-11924841)
chr8 (8-83)||(38909285-38909360)
chr8 (8-83)||(6816030-6816105)
chr8 (8-83)||(36059276-36059351)
chr8 (8-83)||(37034823-37034898)
chr8 (8-83)||(38139310-38139385)
chr8 (13-81)||(38137721-38137789)
chr8 (13-83)||(44908499-44908569)
chr8 (15-83)||(39486028-39486096)
chr8 (8-83)||(169705-169780)
chr8 (13-83)||(1877578-1877648)
chr8 (13-83)||(7219382-7219452)
chr8 (13-83)||(16239168-16239238)
chr8 (13-83)||(17046010-17046080)
chr8 (13-83)||(17313541-17313611)
chr8 (13-83)||(36216576-36216646)
chr8 (13-83)||(39685426-39685496)
chr8 (13-83)||(42844283-42844352)
chr8 (13-83)||(43817964-43818034)
chr8 (13-83)||(44602938-44603008)
chr8 (15-83)||(39525458-39525526)
chr8 (8-83)||(26518796-26518870)
chr8 (13-83)||(2184410-2184480)
chr8 (13-83)||(11579196-11579266)
chr8 (13-83)||(14718870-14718940)
chr8 (13-83)||(27467715-27467785)
chr8 (13-83)||(34805792-34805862)
chr8 (8-83)||(2190647-2190722)
chr8 (21-83)||(12261469-12261532)
chr8 (24-83)||(41526324-41526383)
chr8 (13-83)||(16845031-16845101)
chr8 (13-83)||(34997534-34997604)
chr8 (13-79)||(41360993-41361059)
chr8 (27-83)||(14449611-14449667)
chr8 (13-78)||(1922392-1922454)
chr8 (23-70)||(9275854-9275901)
chr8 (13-83)||(15310399-15310470)
chr8 (13-83)||(15490768-15490839)
chr8 (28-83)||(27877985-27878040)
chr8 (28-83)||(28018166-28018221)
chr8 (16-82)||(34325869-34325935)
chr8 (21-83)||(42984002-42984064)
chr8 (28-83)||(27914929-27914984)
chr8 (28-83)||(27961348-27961403)
chr8 (13-68)||(30550970-30551024)
chr8 (13-68)||(44215719-44215773)
chr8 (25-83)||(45139050-45139108)
chr8 (26-83)||(39997991-39998048)
chr8 (39-83)||(27748864-27748908)
chr8 (13-73)||(44655070-44655130)
chr8 (13-68)||(20665607-20665661)
chr8 (13-72)||(39201524-39201582)
chr8 (21-78)||(12251483-12251539)
chr8 (21-78)||(39443669-39443725)
chr8 (21-81)||(40048678-40048739)
chr8 (34-83)||(41904780-41904829)
chr8 (34-83)||(45296785-45296834)
chr8 (34-78)||(19245453-19245497)
chr8 (34-78)||(19318637-19318681)
[»] scaffold0244 (1 HSPs)
scaffold0244 (8-83)||(7574-7649)
[»] chr3 (59 HSPs)
chr3 (8-83)||(35690212-35690287)
chr3 (13-83)||(12101464-12101534)
chr3 (8-83)||(39721259-39721334)
chr3 (13-83)||(7040886-7040956)
chr3 (13-83)||(43316516-43316586)
chr3 (13-81)||(48961124-48961192)
chr3 (8-83)||(38361750-38361825)
chr3 (13-83)||(14587387-14587457)
chr3 (13-83)||(20849404-20849474)
chr3 (13-83)||(46090118-46090188)
chr3 (13-83)||(54113417-54113487)
chr3 (16-81)||(44762725-44762790)
chr3 (13-81)||(47719489-47719557)
chr3 (8-83)||(35906684-35906759)
chr3 (8-83)||(37413569-37413644)
chr3 (13-83)||(29500337-29500407)
chr3 (13-83)||(30269084-30269154)
chr3 (13-83)||(33932486-33932556)
chr3 (13-83)||(41990764-41990834)
chr3 (13-83)||(45599267-45599337)
chr3 (13-83)||(48545114-48545184)
chr3 (13-83)||(50739159-50739229)
chr3 (13-83)||(50773626-50773696)
chr3 (13-83)||(54510387-54510457)
chr3 (13-81)||(2909437-2909505)
chr3 (21-81)||(36987740-36987800)
chr3 (21-81)||(37013179-37013239)
chr3 (8-83)||(42187749-42187824)
chr3 (8-83)||(53022666-53022741)
chr3 (8-83)||(54203746-54203821)
chr3 (13-83)||(4018921-4018991)
chr3 (13-83)||(7265060-7265130)
chr3 (13-83)||(13337104-13337173)
chr3 (13-83)||(19536712-19536782)
chr3 (13-83)||(36592216-36592286)
chr3 (13-83)||(46850711-46850781)
chr3 (13-83)||(52461032-52461102)
chr3 (13-83)||(13450277-13450347)
chr3 (21-83)||(15496470-15496532)
chr3 (21-83)||(20996334-20996396)
chr3 (13-83)||(26881626-26881696)
chr3 (13-83)||(46757564-46757633)
chr3 (13-83)||(50933209-50933279)
chr3 (13-83)||(54195682-54195752)
chr3 (13-83)||(54741808-54741878)
chr3 (8-77)||(12996818-12996886)
chr3 (13-81)||(29450664-29450732)
chr3 (13-83)||(22347079-22347150)
chr3 (21-83)||(46088720-46088782)
chr3 (13-79)||(52674788-52674853)
chr3 (23-83)||(33899842-33899902)
chr3 (21-83)||(8238911-8238972)
chr3 (27-72)||(10617639-10617684)
chr3 (13-52)||(34433762-34433801)
chr3 (25-72)||(54835743-54835790)
chr3 (21-83)||(32754161-32754222)
chr3 (13-67)||(44075401-44075454)
chr3 (44-81)||(34433542-34433579)
chr3 (53-81)||(35529858-35529886)
[»] chr7 (53 HSPs)
chr7 (8-83)||(4400065-4400140)
chr7 (13-83)||(44651882-44651952)
chr7 (13-83)||(41343320-41343390)
chr7 (13-83)||(5526110-5526177)
chr7 (13-81)||(45620652-45620720)
chr7 (8-83)||(4406627-4406702)
chr7 (13-83)||(10999115-10999185)
chr7 (13-83)||(12907914-12907984)
chr7 (13-83)||(17278157-17278227)
chr7 (13-83)||(27031229-27031299)
chr7 (13-83)||(29448717-29448787)
chr7 (13-83)||(32960796-32960866)
chr7 (13-83)||(40239897-40239967)
chr7 (13-83)||(41426966-41427036)
chr7 (13-83)||(47840733-47840803)
chr7 (8-72)||(4615390-4615454)
chr7 (13-81)||(23639417-23639485)
chr7 (13-81)||(37669271-37669339)
chr7 (8-83)||(20482277-20482352)
chr7 (13-83)||(1448103-1448173)
chr7 (13-83)||(18956298-18956368)
chr7 (25-83)||(21134356-21134414)
chr7 (13-83)||(36769228-36769298)
chr7 (13-83)||(38045660-38045730)
chr7 (13-83)||(40789182-40789252)
chr7 (14-72)||(3840021-3840079)
chr7 (8-70)||(4404292-4404354)
chr7 (13-83)||(43156195-43156264)
chr7 (25-82)||(5483420-5483477)
chr7 (27-83)||(36765592-36765648)
chr7 (16-83)||(4408036-4408102)
chr7 (8-83)||(6607094-6607169)
chr7 (13-83)||(4492435-4492504)
chr7 (22-72)||(17816601-17816650)
chr7 (22-72)||(19050351-19050400)
chr7 (27-83)||(40036027-40036083)
chr7 (34-78)||(47171664-47171708)
chr7 (13-68)||(20762917-20762971)
chr7 (29-83)||(23154654-23154707)
chr7 (8-60)||(20135099-20135151)
chr7 (3-47)||(43111027-43111071)
chr7 (8-51)||(16933501-16933544)
chr7 (8-51)||(16938884-16938927)
chr7 (13-68)||(19036346-19036400)
chr7 (13-68)||(20718236-20718290)
chr7 (13-68)||(29488483-29488537)
chr7 (13-68)||(33232641-33232695)
chr7 (13-68)||(34284783-34284837)
chr7 (25-67)||(35910287-35910329)
chr7 (21-83)||(38049237-38049299)
chr7 (25-83)||(42828881-42828938)
chr7 (34-83)||(42915380-42915429)
chr7 (21-78)||(42995355-42995411)
[»] chr5 (64 HSPs)
chr5 (8-83)||(2530082-2530157)
chr5 (8-82)||(10042789-10042863)
chr5 (8-81)||(40506804-40506877)
chr5 (8-81)||(42416797-42416870)
chr5 (8-83)||(789026-789101)
chr5 (8-83)||(790061-790136)
chr5 (8-83)||(29874668-29874743)
chr5 (13-83)||(28746318-28746388)
chr5 (13-83)||(39803853-39803923)
chr5 (13-83)||(42110690-42110760)
chr5 (15-83)||(43396524-43396592)
chr5 (13-83)||(2475274-2475344)
chr5 (13-83)||(4374857-4374927)
chr5 (13-83)||(6928360-6928430)
chr5 (13-83)||(31884665-31884735)
chr5 (13-83)||(32261715-32261785)
chr5 (13-83)||(40308342-40308412)
chr5 (8-77)||(31958390-31958458)
chr5 (8-81)||(36088575-36088648)
chr5 (15-83)||(42111809-42111877)
chr5 (8-83)||(3246826-3246901)
chr5 (278-329)||(7499850-7499901)
chr5 (13-80)||(24027863-24027930)
chr5 (8-83)||(27176476-27176551)
chr5 (13-75)||(1060707-1060768)
chr5 (13-83)||(5589467-5589537)
chr5 (13-83)||(8314831-8314901)
chr5 (13-83)||(16050774-16050844)
chr5 (21-83)||(16166292-16166354)
chr5 (25-83)||(19361664-19361722)
chr5 (13-83)||(24758984-24759054)
chr5 (13-83)||(26379216-26379286)
chr5 (13-83)||(31939835-31939905)
chr5 (21-83)||(37147077-37147139)
chr5 (19-83)||(25821231-25821295)
chr5 (8-83)||(29383727-29383802)
chr5 (13-83)||(665562-665632)
chr5 (13-83)||(3213231-3213300)
chr5 (21-83)||(7536655-7536717)
chr5 (13-83)||(19270907-19270977)
chr5 (21-83)||(36083804-36083866)
chr5 (13-83)||(42322878-42322948)
chr5 (13-81)||(3297827-3297895)
chr5 (292-336)||(7499690-7499734)
chr5 (8-83)||(29382576-29382652)
chr5 (8-83)||(30503532-30503607)
chr5 (8-83)||(30543875-30543950)
chr5 (21-72)||(43354523-43354573)
chr5 (13-78)||(28990943-28991009)
chr5 (22-83)||(35380505-35380566)
chr5 (16-83)||(14720185-14720252)
chr5 (16-71)||(28869358-28869413)
chr5 (289-331)||(7499573-7499615)
chr5 (28-78)||(15875756-15875806)
chr5 (34-83)||(14205436-14205485)
chr5 (42-83)||(30503759-30503800)
chr5 (42-83)||(30544102-30544143)
chr5 (23-83)||(15976494-15976554)
chr5 (28-83)||(2001506-2001561)
chr5 (280-331)||(7499984-7500035)
chr5 (13-68)||(37461874-37461928)
chr5 (13-83)||(18041185-18041254)
chr5 (34-72)||(20259074-20259112)
chr5 (36-77)||(39782983-39783024)
[»] chr4 (62 HSPs)
chr4 (8-83)||(8847936-8848011)
chr4 (8-83)||(22556962-22557037)
chr4 (13-83)||(36190059-36190129)
chr4 (14-83)||(23628839-23628908)
chr4 (8-83)||(24303803-24303878)
chr4 (13-83)||(7365799-7365869)
chr4 (13-83)||(11180911-11180981)
chr4 (13-83)||(26111381-26111451)
chr4 (13-83)||(34264632-34264702)
chr4 (13-83)||(41144305-41144375)
chr4 (13-83)||(43117521-43117591)
chr4 (8-83)||(17976445-17976520)
chr4 (8-83)||(40665519-40665593)
chr4 (8-83)||(49125543-49125618)
chr4 (13-83)||(1166642-1166712)
chr4 (13-83)||(1169124-1169194)
chr4 (13-83)||(6940178-6940248)
chr4 (13-83)||(7400209-7400279)
chr4 (13-83)||(10137883-10137953)
chr4 (13-83)||(11200836-11200906)
chr4 (13-83)||(13890996-13891066)
chr4 (13-83)||(17624663-17624733)
chr4 (13-83)||(18138338-18138408)
chr4 (13-83)||(26097651-26097721)
chr4 (13-83)||(28116843-28116913)
chr4 (13-83)||(32206596-32206666)
chr4 (13-83)||(40849731-40849801)
chr4 (13-83)||(40950948-40951018)
chr4 (21-83)||(46045795-46045857)
chr4 (13-83)||(53274631-53274701)
chr4 (13-83)||(55188173-55188243)
chr4 (13-83)||(55991822-55991892)
chr4 (8-83)||(37873646-37873721)
chr4 (10-81)||(51153484-51153555)
chr4 (13-83)||(11967004-11967074)
chr4 (13-83)||(27288474-27288544)
chr4 (13-83)||(55208488-55208558)
chr4 (34-83)||(40952044-40952093)
chr4 (8-80)||(8654318-8654389)
chr4 (8-83)||(20681193-20681268)
chr4 (8-83)||(32200716-32200791)
chr4 (13-83)||(346607-346677)
chr4 (21-83)||(8151213-8151274)
chr4 (13-83)||(29099625-29099695)
chr4 (21-83)||(32139419-32139481)
chr4 (21-78)||(39651746-39651803)
chr4 (8-83)||(51187615-51187690)
chr4 (22-72)||(29346238-29346287)
chr4 (22-72)||(35832002-35832051)
chr4 (25-73)||(28361503-28361551)
chr4 (15-83)||(30071346-30071414)
chr4 (13-72)||(24631113-24631171)
chr4 (13-68)||(26926954-26927008)
chr4 (23-73)||(25881932-25881982)
chr4 (13-68)||(10262013-10262067)
chr4 (13-68)||(21562388-21562442)
chr4 (13-68)||(24080084-24080138)
chr4 (13-68)||(43329909-43329963)
chr4 (8-47)||(45472473-45472512)
chr4 (13-47)||(34663873-34663907)
chr4 (25-83)||(41986282-41986339)
chr4 (21-78)||(26871612-26871668)
[»] chr2 (34 HSPs)
chr2 (8-83)||(3243295-3243370)
chr2 (8-83)||(36078556-36078631)
chr2 (13-83)||(10120614-10120684)
chr2 (13-83)||(1117983-1118055)
chr2 (13-81)||(34912656-34912724)
chr2 (8-83)||(38879136-38879211)
chr2 (13-83)||(970958-971028)
chr2 (13-83)||(1835690-1835760)
chr2 (13-83)||(3079722-3079792)
chr2 (13-83)||(5166271-5166341)
chr2 (13-83)||(7233028-7233098)
chr2 (13-83)||(7274675-7274745)
chr2 (13-83)||(8878124-8878194)
chr2 (13-83)||(18166833-18166903)
chr2 (13-83)||(24926085-24926155)
chr2 (13-83)||(31972287-31972357)
chr2 (13-83)||(40202220-40202290)
chr2 (13-78)||(9799330-9799395)
chr2 (21-78)||(38709708-38709765)
chr2 (13-81)||(4631213-4631281)
chr2 (13-83)||(668294-668364)
chr2 (13-83)||(8683664-8683734)
chr2 (13-83)||(35423791-35423861)
chr2 (17-83)||(36085947-36086013)
chr2 (21-83)||(41452828-41452890)
chr2 (21-83)||(45474735-45474797)
chr2 (13-83)||(3324264-3324334)
chr2 (21-83)||(17032813-17032875)
chr2 (8-83)||(2180018-2180093)
chr2 (13-68)||(3708456-3708510)
chr2 (13-68)||(11868906-11868960)
chr2 (13-68)||(35360299-35360353)
chr2 (37-83)||(20313248-20313294)
chr2 (18-75)||(37522706-37522763)
[»] chr1 (52 HSPs)
chr1 (8-83)||(24473551-24473626)
chr1 (13-83)||(43119114-43119184)
chr1 (13-83)||(11754228-11754298)
chr1 (13-83)||(33818094-33818164)
chr1 (13-83)||(33877562-33877632)
chr1 (8-82)||(36952714-36952788)
chr1 (8-75)||(34652274-34652341)
chr1 (8-83)||(39879140-39879215)
chr1 (8-83)||(46040486-46040561)
chr1 (13-83)||(11583161-11583231)
chr1 (13-83)||(17585520-17585590)
chr1 (13-83)||(25659810-25659880)
chr1 (13-83)||(33373820-33373890)
chr1 (13-83)||(33642615-33642685)
chr1 (13-83)||(33895217-33895287)
chr1 (13-83)||(39327043-39327113)
chr1 (13-83)||(41901700-41901770)
chr1 (13-83)||(45104185-45104255)
chr1 (13-83)||(47037131-47037201)
chr1 (13-82)||(43120780-43120849)
chr1 (8-83)||(1322525-1322600)
chr1 (8-83)||(17249035-17249110)
chr1 (13-83)||(3265121-3265191)
chr1 (13-83)||(7833550-7833620)
chr1 (13-83)||(9574866-9574936)
chr1 (13-83)||(14487324-14487394)
chr1 (13-83)||(18091279-18091348)
chr1 (13-83)||(33831925-33831995)
chr1 (13-83)||(33894087-33894157)
chr1 (13-83)||(36165521-36165591)
chr1 (13-83)||(38802310-38802380)
chr1 (21-83)||(43123051-43123113)
chr1 (13-78)||(40432208-40432273)
chr1 (21-81)||(34078295-34078355)
chr1 (25-81)||(39729206-39729262)
chr1 (13-83)||(46588091-46588161)
chr1 (25-81)||(17366355-17366411)
chr1 (13-73)||(31638425-31638485)
chr1 (24-83)||(16097358-16097417)
chr1 (18-77)||(23730301-23730359)
chr1 (34-83)||(7308331-7308380)
chr1 (21-78)||(49223163-49223219)
chr1 (16-83)||(11606467-11606534)
chr1 (21-83)||(49571214-49571276)
chr1 (40-83)||(31215864-31215907)
chr1 (40-83)||(31221619-31221662)
chr1 (25-83)||(16033091-16033148)
chr1 (21-83)||(28568754-28568815)
chr1 (27-81)||(33932934-33932988)
chr1 (13-79)||(43124358-43124424)
chr1 (53-83)||(45589661-45589691)
chr1 (25-78)||(17670003-17670055)
[»] scaffold0198 (1 HSPs)
scaffold0198 (13-83)||(15261-15331)
[»] chr6 (30 HSPs)
chr6 (13-83)||(28472225-28472295)
chr6 (13-83)||(34247755-34247825)
chr6 (21-83)||(29043219-29043281)
chr6 (11-83)||(559729-559801)
chr6 (8-80)||(6018577-6018649)
chr6 (13-80)||(6833555-6833622)
chr6 (8-83)||(29859408-29859483)
chr6 (13-83)||(173062-173132)
chr6 (13-83)||(3850229-3850299)
chr6 (17-83)||(5414562-5414628)
chr6 (13-83)||(17505490-17505560)
chr6 (13-83)||(18593610-18593680)
chr6 (13-83)||(20791550-20791620)
chr6 (13-83)||(32244381-32244451)
chr6 (13-83)||(34207003-34207073)
chr6 (8-81)||(10945708-10945781)
chr6 (13-82)||(33945824-33945893)
chr6 (16-83)||(24046560-24046627)
chr6 (13-83)||(7541109-7541179)
chr6 (13-83)||(24162796-24162866)
chr6 (27-83)||(19988908-19988964)
chr6 (13-83)||(3053915-3053984)
chr6 (13-78)||(18314010-18314074)
chr6 (16-83)||(8866970-8867037)
chr6 (13-68)||(33976006-33976060)
chr6 (13-68)||(247422-247476)
chr6 (13-68)||(12582473-12582527)
chr6 (21-83)||(28231075-28231136)
chr6 (34-72)||(34319169-34319207)
chr6 (53-82)||(10943150-10943179)
[»] scaffold0024 (2 HSPs)
scaffold0024 (8-81)||(90463-90536)
scaffold0024 (36-81)||(110529-110574)
[»] scaffold0768 (1 HSPs)
scaffold0768 (13-80)||(6306-6373)
[»] scaffold0197 (1 HSPs)
scaffold0197 (13-83)||(25712-25782)
[»] scaffold0481 (2 HSPs)
scaffold0481 (13-83)||(4512-4582)
scaffold0481 (13-83)||(7452-7522)
[»] scaffold0178 (1 HSPs)
scaffold0178 (13-83)||(7292-7362)
[»] scaffold0166 (1 HSPs)
scaffold0166 (13-83)||(1478-1548)
[»] scaffold0020 (1 HSPs)
scaffold0020 (16-83)||(132664-132730)
[»] scaffold0078 (1 HSPs)
scaffold0078 (23-83)||(5732-5793)
[»] scaffold0027 (1 HSPs)
scaffold0027 (21-81)||(138031-138091)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-83)||(229101-229156)
[»] scaffold0318 (1 HSPs)
scaffold0318 (39-83)||(1083-1127)
[»] scaffold0038 (1 HSPs)
scaffold0038 (21-83)||(31572-31633)
[»] scaffold0016 (1 HSPs)
scaffold0016 (21-83)||(99393-99454)
[»] scaffold0010 (2 HSPs)
scaffold0010 (25-83)||(50262-50319)
scaffold0010 (25-83)||(57795-57852)
[»] scaffold0095 (2 HSPs)
scaffold0095 (21-78)||(236-292)
scaffold0095 (21-78)||(1726-1782)
[»] scaffold0088 (1 HSPs)
scaffold0088 (21-78)||(55402-55458)


Alignment Details
Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 38909380 - 38909464
Alignment:
Q  202 aacagatacaaaa-gtgaaaagtgtatctgtttaagttaaataaccagcttcgtacaacagaacaggcttgtttaccaggcagag 285  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38909380 aacagatacaaaaagtgaaaagtgtatctgtttaagttaaataaccagcttcgtacaacacaacaggcttgtttaccaggcagag 38909464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 11924766 - 11924841
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  11924766 ccaagaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 11924841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 38909285 - 38909360
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38909285 ccaaaaaaataataaattcaaaattttgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 38909360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 6816030 - 6816105
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  6816030 ccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 6816105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 36059351 - 36059276
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  36059351 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 36059276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 37034823 - 37034898
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37034823 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37034898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 38139310 - 38139385
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  38139310 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 38139385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 38137789 - 38137721
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||    
T  38137789 aaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaa 38137721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 44908499 - 44908569
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  44908499 aaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 44908569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 39486096 - 39486028
Alignment:
Q  15 aataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  39486096 aataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactgtagaact 39486028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 169780 - 169705
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| ||  |||||||||||||||||||||||||||    
T  169780 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaacttaaaaataactttagaact 169705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 1877648 - 1877578
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||| ||||||||    
T  1877648 aaaataataaattcaaagttttgtacaatattttgccaaacaatttttaacttaaaaataacgttagaact 1877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7219382 - 7219452
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || |||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  7219382 aaaataataaattcaaaattttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 7219452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 16239238 - 16239168
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  16239238 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 16239168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 17046080 - 17046010
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  17046080 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17046010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 17313611 - 17313541
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  17313611 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17313541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 36216646 - 36216576
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  36216646 aaaataataaattcaaagttttgtataatattttgccaaacaacttttaactcaaaaataactttagaact 36216576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 39685426 - 39685496
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  39685426 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 39685496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 42844283 - 42844352
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  42844283 aaaataataaatttaaagtt-tgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 42844352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 43818034 - 43817964
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  43818034 aaaataataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 43817964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 44603008 - 44602938
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  44603008 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 44602938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 39525458 - 39525526
Alignment:
Q  15 aataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||| || ||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  39525458 aataataaattcaaagttttgcacaatattttgccaaacaacttttaaattaaaaataactttagaact 39525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 26518870 - 26518796
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| |||||||||    
T  26518870 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataa-tttagaact 26518796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 2184480 - 2184410
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| |||||||||||||| ||| || |||||||||| |||||||||||||||||    
T  2184480 aaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactttaaaataactttagaact 2184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 11579196 - 11579266
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||| ||||||||| || |||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  11579196 aaaataacaaattcaaatttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaact 11579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 14718870 - 14718940
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  14718870 aaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 14718940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 27467715 - 27467785
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  27467715 aaaaaaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27467785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 34805792 - 34805862
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||| |||||||||    
T  34805792 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 34805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 2190722 - 2190647
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||| |||||| |||||||||||||| ||| || |||||||||| ||||||| |||||||||    
T  2190722 ccaaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaacttcaaaataattttagaact 2190647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 12261532 - 12261469
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaac-ttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| ||||    
T  12261532 aaattcaaagttttgtacaatattttgtcaaacaactttttaacttaaaaataactttaaaact 12261469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 41526324 - 41526383
Alignment:
Q  24 ttcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||||||||||||||  || |||||||||||||||||||||||||||||||    
T  41526324 ttcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact 41526383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 16845031 - 16845101
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || |||||||||||||| ||| || ||||||| | ||||||||||||||||||    
T  16845031 aaaataataaattcaaaattttgtacaatattttgccaaacagcttttaattcaaaaataactttagaact 16845101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 34997534 - 34997604
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||  | || |||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  34997534 aaaataataaattcctaattttgtacaatattttgccaaacaacttttaacttaaaaataactatagaact 34997604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 41360993 - 41361059
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttag 79  Q
    |||||||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||    
T  41360993 aaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttag 41361059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 14449667 - 14449611
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  14449667 aaagttttgtacaatattttgttaaacaacttttaacataaaaataactttagaact 14449611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 1922392 - 1922454
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||||||| |||||||||||||||||   ||||||||| ||||||||| |||||    
T  1922392 aaaataataaattcaaagttttgtacaatattttgtca---aacttttaatttaaaaatagcttta 1922454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 9275854 - 9275901
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaa 70  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  9275854 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaa 9275901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 15310399 - 15310470
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaa-cttttaacttaaaaataactttagaact 83  Q
    ||||||| |||||||||||| | |||||||||||| ||| ||| |||||||||||||||||| |||||||||    
T  15310399 aaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15310470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 15490768 - 15490839
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaa-cttttaacttaaaaataactttagaact 83  Q
    ||||||| |||||||||||| | |||||||||||| ||| ||| |||||||||||||||||| |||||||||    
T  15490768 aaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15490839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 27877985 - 27878040
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  27877985 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 27878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 28018166 - 28018221
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  28018166 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 28018221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 34325869 - 34325935
Alignment:
Q  16 ataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||||||||| ||| || | |||||||||||||||| ||||||||||||||| |||||| |||||||    
T  34325869 ataataaatttaaaattttttacaatattttgtcaaacaacttttaacttaagaataaccttagaac 34325935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 42984002 - 42984064
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| || ||| |||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  42984002 aaattaaatgttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 42984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 27914929 - 27914984
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| |||||||| ||||    
T  27914929 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27914984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 27961348 - 27961403
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| |||||||| ||||    
T  27961348 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27961403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 30551024 - 30550970
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||||||| |||| || ||||||||    
T  30551024 aaaataataaattcaaagtt-tgtacaatattttgtcaaacaacattaaacttaaa 30550970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 44215773 - 44215719
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||||||| |||| || ||||||||    
T  44215773 aaaataataaattcaaagtt-tgtacaatattttgtcaaacaacattaaacttaaa 44215719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 45139108 - 45139050
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| || |||||||||||||| | | |||||||||||||||||||||||||| ||||    
T  45139108 tcaaaattttgtacaatattttgccgaacaacttttaacttaaaaataactttaaaact 45139050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 39997991 - 39998048
Alignment:
Q  26 caaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||| |||||||| |||||  || |||||||||||| ||||||||||||||||||    
T  39997991 caaagttttgtacaattttttgctaaacaacttttaactcaaaaataactttagaact 39998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 27748864 - 27748908
Alignment:
Q  39 aatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||    
T  27748864 aatattttgccaaacaacttttaacttaaaaataactttaaaact 27748908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 44655070 - 44655130
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataa 73  Q
    |||||||| ||||||||||| |||| || |||||| ||| |||||||| ||||||||||||    
T  44655070 aaaataattaattcaaagttttgtataaaattttgccaaacaacttttgacttaaaaataa 44655130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 20665661 - 20665607
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  20665661 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 20665607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 39201524 - 39201582
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||||||||| || |||||||||||||| ||| |||| |||||||| ||||||    
T  39201524 aaaataataaattcaaattt-tgtacaatattttgccaaacaacatttaactttaaaata 39201582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 12251539 - 12251483
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  12251539 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 12251483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 39443669 - 39443725
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  39443669 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 39443725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 40048739 - 40048678
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaag-caacttttaacttaaaaataactttagaa 81  Q
    |||||||||||| || |||||||| ||  ||  |||||||||||||||||||||||||||||    
T  40048739 aaattcaaagttttggacaatattctgcaaaaacaacttttaacttaaaaataactttagaa 40048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 41904780 - 41904829
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  41904780 tgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 41904829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 45296834 - 45296785
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  45296834 tgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 45296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 19245453 - 19245497
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||||| |||| |||||||| |||||| |||||    
T  19245453 tgtacaatattttgtcaaacaacatttaacttcaaaatagcttta 19245497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 19318637 - 19318681
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||||| |||| |||||||| |||||| |||||    
T  19318637 tgtacaatattttgtcaaacaacatttaacttcaaaatagcttta 19318681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 7649 - 7574
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7649 ccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 7574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 35690287 - 35690212
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35690287 ccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 35690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 12101534 - 12101464
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12101534 aaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 12101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 39721259 - 39721334
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39721259 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 39721334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7040886 - 7040956
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  7040886 aaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 7040956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 43316586 - 43316516
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  43316586 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 48961124 - 48961192
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||    
T  48961124 aaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactttagaa 48961192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 38361750 - 38361825
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  38361750 ccaaaaaaataataaattcaaagttttgtacaatattctgccaaacaacttttaacttaaaaataactttagaact 38361825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 14587457 - 14587387
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  14587457 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 14587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 20849474 - 20849404
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  20849474 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 20849404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 46090188 - 46090118
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  46090188 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46090118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 54113417 - 54113487
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  54113417 aaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttataact 54113487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 44762790 - 44762725
Alignment:
Q  16 ataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  44762790 ataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 44762725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 47719489 - 47719557
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  47719489 aaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaa 47719557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 35906759 - 35906684
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  35906759 ccaaaaaaataatcaattcaaagttttgtacaatattttgtcaaccaacttttaatttaaaaataattttagaact 35906684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 37413569 - 37413644
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||||| || |||||||||||||| ||| |||||| ||||||||||||||||||| ||||    
T  37413569 ccaagaaaataataaattcaaaattttgtacaatattttgccaaacaacttgtaacttaaaaataactttataact 37413644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 29500337 - 29500407
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  29500337 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 29500407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 30269154 - 30269084
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  30269154 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 30269084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 33932556 - 33932486
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| | |||||||||||||||| || ||||||||| ||||||||||||||||||    
T  33932556 aaaataataaattcaaagttttatacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33932486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 41990834 - 41990764
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| ||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  41990834 aaaataataaatttaaagtttggtacaatattttgccaaacaacttttaacttaaaaataactttagaact 41990764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 45599337 - 45599267
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  45599337 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 45599267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 48545114 - 48545184
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| ||||| |||||||||||| || ||||||||| ||||||||||||||||||    
T  48545114 aaaataataaattcaaagttttgtacgatattttgtcaaacagcttttaactcaaaaataactttagaact 48545184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 50739159 - 50739229
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  50739159 aaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact 50739229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 50773696 - 50773626
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  50773696 aaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact 50773626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 54510457 - 54510387
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  54510457 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 54510387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 2909437 - 2909505
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| |||| ||||||||||||| || ||||||||| ||||||||||||||||    
T  2909437 aaaataataaattcaaagttttgtataatattttgtcaaacagcttttaactcaaaaataactttagaa 2909505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 36987800 - 36987740
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  36987800 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 36987740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 37013239 - 37013179
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  37013239 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 37013179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 42187824 - 42187749
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||  ||||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  42187824 ccaaaaaaataataaattttaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttataact 42187749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 53022666 - 53022741
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||| | ||| || ||||||||| ||||||||||||||||||    
T  53022666 ccaaaaaaataataaattcaaagttttgtacaatatttcgccaaacagcttttaactcaaaaataactttagaact 53022741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 54203821 - 54203746
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||| || ||| |||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  54203821 ccaaaaaaataataaatttaatgttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact 54203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 4018921 - 4018991
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  4018921 aaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 4018991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7265060 - 7265130
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| ||||||||| |||||||| |  ||||||||| ||||||||||||||||||    
T  7265060 aaaataataaattcaaagttttgtacaataatttgtcaaactgcttttaactcaaaaataactttagaact 7265130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 13337104 - 13337173
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| ||||| |||||||| ||| |||| ||||||||||||||||||||||||||    
T  13337104 aaaataataaattcaaagttttgtacgatattttgccaaacaac-tttaacttaaaaataactttagaact 13337173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 19536712 - 19536782
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| | |||||||||||| ||| |||||||||| | ||||||||||||||||||    
T  19536712 aaaataataaattcaaagttttatacaatattttgccaaacaacttttaattcaaaaataactttagaact 19536782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 36592286 - 36592216
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| ||  |||||||| ||||||||||||||||||    
T  36592286 aaaataataaattcaaagttttgtacaatattttgacaaacagtttttaactcaaaaataactttagaact 36592216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 46850781 - 46850711
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||| ||||| ||||    
T  46850781 aaaataataaattcaaaggtttgtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 46850711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 52461032 - 52461102
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  52461032 aaaattataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 52461102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 13450277 - 13450347
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| || ||||||||| |||||||| |||||||||    
T  13450277 aaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataattttagaact 13450347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 15496532 - 15496470
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| |||||| || |||||||||||||||||||||    
T  15496532 aaattcaaagttttgtacaatattttgccaaacaacttatagcttaaaaataactttagaact 15496470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 20996396 - 20996334
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| || |||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  20996396 aaattcaaaattttgtacaatattttgacaaacaacttttaatttaaaaataactttagaact 20996334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 26881626 - 26881696
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| ||  |||||||| ||||||||||||||||||    
T  26881626 aaaataataaattcaaagttttgtaaaatattttgccaaacagtttttaactcaaaaataactttagaact 26881696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 46757564 - 46757633
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| | |||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  46757564 aaaataataaattcaaagtt-tatacaatattttgccaaacagcttttaactcaaaaataactttagaact 46757633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 50933209 - 50933279
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| ||| || ||||||||||||||| || || ||||||||||||||||||||||| ||||    
T  50933209 aaaataataaatttaaatttttgtacaatattttgttaaacagcttttaacttaaaaataactttataact 50933279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 54195752 - 54195682
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || ||||||||||||||||||  || ||||||||||||||||| || ||||||    
T  54195752 aaaataataaattcaaaattttgtacaatattttgtcaaataatttttaacttaaaaataatttcagaact 54195682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 54741808 - 54741878
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| ||| || |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  54741808 aaaataataaatttaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 54741878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 12996886 - 12996818
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttt 77  Q
    |||| ||| |||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  12996886 ccaaaaaagtaataaattcaaagtt-tgtacaatatttttccaaacaacttttaacttaaaaataacttt 12996818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 29450664 - 29450732
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| ||||||||||||||  || || ||||||||  ||||||||||||||||    
T  29450664 aaaataataaattcaaagttttgtacaatattttgctaaacagcttttaacccaaaaataactttagaa 29450732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 22347150 - 22347079
Alignment:
Q  13 aaaataataaattcaaagttatgtacaata-ttttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| ||||||||| |||||  || || ||||||||| ||||||||||||||||||    
T  22347150 aaaataataaattcaaagttttgtacaatatttttgctaaacagcttttaactcaaaaataactttagaact 22347079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 46088782 - 46088720
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| |||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  46088782 aaattaaaagttttgtacaatatttttccaaacaacttttcacttaaaaataactttagaact 46088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 52674788 - 52674853
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttag 79  Q
    |||||||||||||||||||| |||||||||||||| ||| | | |||||||| ||||||||||||||    
T  52674788 aaaataataaattcaaagttttgtacaatattttgccaaac-agttttaactcaaaaataactttag 52674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 33899842 - 33899902
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||  ||| ||||||||| ||| |||||||||||||||||||||||||| ||||    
T  33899842 attcaaagtttcgtaaaatattttgccaaacaacttttaacttaaaaataactttataact 33899902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 8238911 - 8238972
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| |||||||||||||| ||| |||| ||||||||||||||||||||| ||||    
T  8238911 aaatttaaagtt-tgtacaatattttgccaaacaacatttaacttaaaaataactttaaaact 8238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 10617639 - 10617684
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  10617639 aaagttttgtacaatattttgccaaacaacttttaacttaaaaata 10617684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 34433801 - 34433762
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaag 52  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  34433801 aaaataataaattaaaagttttgtacaatattttgtcaag 34433762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 54835743 - 54835790
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||| || |||||||||||||| ||| ||||||||||||||||||||    
T  54835743 tcaaaattttgtacaatattttgccaaacaacttttaacttaaaaata 54835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 32754161 - 32754222
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||||||| |||  |||||||||||| || ||||| ||||    
T  32754161 aaattcaaagtt-tgtacaatattttgtcaaacaatatttaacttaaaagtagctttaaaact 32754222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 44075454 - 44075401
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaa 67  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || |||||||    
T  44075454 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaa 44075401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 34433579 - 34433542
Alignment:
Q  44 tttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  34433579 tttgtcaaataacttttaacttaaaaataactttagaa 34433542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 35529886 - 35529858
Alignment:
Q  53 caacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||||||||||||    
T  35529886 caacttttaacttaaaaataactttagaa 35529858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 4400140 - 4400065
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4400140 ccaaaaaaatattaaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 4400065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 44651952 - 44651882
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  44651952 aaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaact 44651882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 41343390 - 41343320
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  41343390 aaaataataaattcaaagttttgtacaatattttgccaaacaacatttaacttaaaaataactttagaact 41343320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 5526110 - 5526177
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||    
T  5526110 aaaataataaattcaaagttttgtacaatattttgtca---aacttttaacttaaaaataactttagaact 5526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 45620652 - 45620720
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||    
T  45620652 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 45620720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 4406702 - 4406627
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||| |||||    
T  4406702 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaattaactttggaact 4406627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 10999115 - 10999185
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  10999115 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10999185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 12907914 - 12907984
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  12907914 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 12907984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 17278157 - 17278227
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  17278157 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17278227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 27031299 - 27031229
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  27031299 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27031229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 29448787 - 29448717
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  29448787 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 29448717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 32960866 - 32960796
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  32960866 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 32960796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 40239967 - 40239897
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  40239967 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 40239897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 41426966 - 41427036
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  41426966 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 41427036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 47840733 - 47840803
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  47840733 aaaatactaaattcaaagttttgtacaatattttgccaaacaactttcaacttaaaaataactttagaact 47840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 4615390 - 4615454
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  4615390 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaata 4615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 23639485 - 23639417
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||    
T  23639485 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 23639417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 37669339 - 37669271
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||    
T  37669339 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 37669271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 20482277 - 20482352
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||| ||||||| ||||||| ||||    
T  20482277 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaaattaaaaaaaactttaaaact 20482352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 1448103 - 1448173
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||| ||||||||||    
T  1448103 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaatagctttagaact 1448173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 18956368 - 18956298
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  18956368 aaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 18956298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 21134414 - 21134356
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  21134414 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 21134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 36769228 - 36769298
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| |||||  ||||||| ||| |||||||||||||||||||||||||||||||    
T  36769228 aaaataataaatttaaagttttgtactttattttgccaaacaacttttaacttaaaaataactttagaact 36769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 38045660 - 38045730
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||| | |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  38045660 aaaataataaattcaaagctttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 38045730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 40789182 - 40789252
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||| ||||    
T  40789182 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttataact 40789252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 3840021 - 3840079
Alignment:
Q  14 aaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||| || |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3840021 aaatattagattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaata 3840079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 4404292 - 4404354
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaa 70  Q
    |||| |||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||    
T  4404292 ccaaaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaa 4404354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 43156195 - 43156264
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||| ||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  43156195 aaaataataa-ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 43156264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 5483420 - 5483477
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  5483420 tcaaagttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaac 5483477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 36765592 - 36765648
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| |||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  36765592 aaagttttgtactttattttgtcaaacaacttttaacttaaaaataactttagaact 36765648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 4408102 - 4408036
Alignment:
Q  16 ataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| | |||||||||||| ||| || ||||||||||||||||||||||| ||||    
T  4408102 ataataaattcaaagtt-tatacaatattttgccaaacagcttttaacttaaaaataactttaaaact 4408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 6607094 - 6607169
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||| |||||| |||| ||||||||| ||| ||  ||||||||||||||||| |||||||||    
T  6607094 ccaaaaaaataataaatttaaagttttgtataatattttgccaaacagattttaacttaaaaataaatttagaact 6607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 4492504 - 4492435
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| |||  ||||||||| || |||||||| ||||||||    
T  4492504 aaaataataaattcaaagttttgtacaatattttgccaaataacttttaa-tttaaaataaccttagaact 4492435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 17816601 - 17816650
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  17816601 aattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 17816650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 19050400 - 19050351
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  19050400 aattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 19050351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 40036083 - 40036027
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| |||||||||||||| |||  ||||||||||||||||||||||||| ||||    
T  40036083 aaagttttgtacaatattttgccaaaaaacttttaacttaaaaataactttaaaact 40036027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 47171664 - 47171708
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  47171664 tgtacaatattttgtcaagcaacatttaacttaaaaatagcttta 47171708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 20762917 - 20762971
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||||||| |||| || ||||||||    
T  20762917 aaaataataaattcaaagtt-tgtacaatattttgtcaaacaacattaaacttaaa 20762971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 23154654 - 23154707
Alignment:
Q  29 agttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  23154654 agttttgtacaatattttgccaaacaacttttaactt-aaaataactttagaact 23154707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 20135151 - 20135099
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaactttt 60  Q
    |||| |||||| ||||||||||||| |||||||||||||| ||| ||||||||    
T  20135151 ccaaaaaaatattaaattcaaagttttgtacaatattttgccaaacaactttt 20135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 43111027 - 43111071
Alignment:
Q  3 catctccaagaaaataataaattcaaagttatgtacaatattttg 47  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||    
T  43111027 catcaccaaaaaaataataaattcaaagttttgtacaatattttg 43111071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 16933544 - 16933501
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaa 51  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||    
T  16933544 ccaaaaaaataataaattcaatgttttgtacaatattttgtcaa 16933501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 16938927 - 16938884
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaa 51  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||    
T  16938927 ccaaaaaaataataaattcaatgttttgtacaatattttgtcaa 16938884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 19036400 - 19036346
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  19036400 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 19036346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 20718236 - 20718290
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  20718236 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 20718290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 29488483 - 29488537
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  29488483 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 29488537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 33232695 - 33232641
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  33232695 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 33232641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 34284837 - 34284783
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  34284837 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 34284783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 35910287 - 35910329
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaa 67  Q
    |||||||| |||| ||||||||||||| |||||||||||||||    
T  35910287 tcaaagttttgtataatattttgtcaaacaacttttaacttaa 35910329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 38049299 - 38049237
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| |||||||||||||  ||| |||||||||| |||||||||| |||| ||||    
T  38049299 aaattaaaagttgtgtacaatattttaccaaacaacttttaatttaaaaataattttaaaact 38049237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 42828938 - 42828881
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| || ||||| ||||    
T  42828938 tcaaagtt-tgtacaatattttgtcaaacaacatttaacttaaaagtagctttaaaact 42828881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 42915380 - 42915429
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  42915380 tgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 42915429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 42995355 - 42995411
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  42995355 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 42995411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 2530082 - 2530157
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2530082 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 2530157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 10042789 - 10042863
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  10042789 ccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttcagaac 10042863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 40506877 - 40506804
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  40506877 ccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttaagaa 40506804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 42416797 - 42416870
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||| |||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    
T  42416797 ccaaaaaaataataaattcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa 42416870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 789101 - 789026
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  789101 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttagaact 789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 790136 - 790061
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  790136 ccaaaaaaataataaattcatagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact 790061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 29874743 - 29874668
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||    
T  29874743 ccaaaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactatagaact 29874668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 28746388 - 28746318
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  28746388 aaaataataaattcaaagttttatacaatattttgccaaacaacttttaacttaaaaataactttagaact 28746318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 39803923 - 39803853
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  39803923 aaaataataaattcaaagttttgtacaatattttgccaaacaacgtttaacttaaaaataactttagaact 39803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 42110690 - 42110760
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  42110690 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 42110760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 43396524 - 43396592
Alignment:
Q  15 aataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  43396524 aataataaattcaaagttttgtacaatattttgccaaacaacttctaacttaaaaataactttagaact 43396592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 2475344 - 2475274
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  2475344 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 2475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 4374927 - 4374857
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||| ||| ||| |||||||||||| ||||||||||||||||||    
T  4374927 aaaataataaattcaaagttttgtacaatatcttgccaaacaacttttaactcaaaaataactttagaact 4374857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 6928430 - 6928360
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  6928430 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 31884735 - 31884665
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  31884735 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 31884665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 32261785 - 32261715
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| ||||||||||||| |||| || ||||||||| ||||||||||||||||||    
T  32261785 aaaataataaattcaaagttttgtacaatattttatcaaacagcttttaactcaaaaataactttagaact 32261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 40308342 - 40308412
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||||    
T  40308342 aaaataataaattcaaagttttgtacactattttgccaaacagcttttaacttaaaaataactttagaact 40308412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 31958458 - 31958390
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttt 77  Q
    |||| ||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  31958458 ccaaaaaagtaataaattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaataacttt 31958390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 36088575 - 36088648
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||| |||||||||||||||||||| || ||||||||||||||| || ||||| ||||||||||||||||||||    
T  36088575 ccaaaaaaataataaattcaaagttttgaacaatattttgtcaaacagctttttacttaaaaataactttagaa 36088648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 42111877 - 42111809
Alignment:
Q  15 aataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||| ||||    
T  42111877 aataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaacaataactttataact 42111809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 3246826 - 3246901
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||| || ||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  3246826 ccaaaaaaataataaatttaatgttttgtacaatattttgccaaacaacttgtaacttaaaaataactttagaact 3246901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 7499850 - 7499901
Alignment:
Q  278 aggcagagagggaggaagaagcagctagaaggcaacaagaggagagggaaag 329  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7499850 aggcagagagtgaggaagaagcagctagaaggcaacaagaggagagggaaag 7499901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 24027930 - 24027863
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||||||||    
T  24027930 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaga 24027863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 27176551 - 27176476
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| |||  | ||||||||| ||||||||||||||||||    
T  27176551 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact 27176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 1060707 - 1060768
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataact 75  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  1060707 aaaataataaattcaaagtt-tgtacaatattttgtcaaacaatttttaacttaaaaataact 1060768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 5589537 - 5589467
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| ||||||||||| || |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  5589537 aaaatgataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 5589467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 8314831 - 8314901
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| |||||||||  || ||||||||||||||||||||| |||||||||    
T  8314831 aaaataataaattcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataattttagaact 8314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 16050844 - 16050774
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||| ||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  16050844 aaaataataatttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 16050774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 16166354 - 16166292
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  16166354 aaattcaaagttttgtacaatattttgtcaaataacttttaacttaaaaataattttagaact 16166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 19361664 - 19361722
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  19361664 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 19361722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 24758984 - 24759054
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  24758984 aaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 24759054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 26379216 - 26379286
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  26379216 aaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 26379286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 31939905 - 31939835
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |  ||||||||| ||||||||||||||||||    
T  31939905 aaaataataaattcaaagttttgtacaatattttgccaaactgcttttaactcaaaaataactttagaact 31939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 37147077 - 37147139
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37147077 aaattcgaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37147139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 25821231 - 25821295
Alignment:
Q  19 ataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  25821231 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25821295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 29383802 - 29383727
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| | |||||| ||||||||| || ||||||||| |||||||||| |||||||    
T  29383802 ccaaaaaaataataaattcaaagttttttacaatgttttgtcaaacagcttttaactcaaaaataactatagaact 29383727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 665632 - 665562
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| | | || ||||||||| ||||||||||||||||||    
T  665632 aaaataataaattcaaagttttgtataatattttgccgaacagcttttaactcaaaaataactttagaact 665562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 3213300 - 3213231
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||| ||||| ||||    
T  3213300 aaaataataaattcaaagtt-tgtacaatattttgtcaaacaacatttaactttaaaatagctttaaaact 3213231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 7536655 - 7536717
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| ||| ||||||||||||||  || |||||||||||||||||||||||||||||||    
T  7536655 aaattcaatgttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact 7536717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 19270907 - 19270977
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  19270907 aaaataataaattcaaagttttgtataatattttgccaaacaacctttaacttaaaaatagctttaaaact 19270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 36083804 - 36083866
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  36083804 aaattcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact 36083866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 42322878 - 42322948
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||   || || ||||||||| ||||||||||||||||||    
T  42322878 aaaataataaattcaaagttttgtacaatattttacgaaacagcttttaactcaaaaataactttagaact 42322948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 3297895 - 3297827
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| | |||| ||||||| ||| || ||||||||| ||||||||||||||||    
T  3297895 aaaataataaattcaaagttttatacattattttgccaaacagcttttaactcaaaaataactttagaa 3297827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 7499690 - 7499734
Alignment:
Q  292 gaagaagcagctagaaggcaacaagaggagagggaaaggaaagag 336  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  7499690 gaagcagcagctagaaggcaacaagaggagagggaaaggaaagag 7499734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 29382652 - 29382576
Alignment:
Q  8 ccaagaaaataataaattcaaag-ttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||| |||  || ||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  29382652 ccaaaaaaataataaatttaaaaattttgtactatattttgccaaacaacttttaacttaaaaataactttagaact 29382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 30503607 - 30503532
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||| ||| || ||||||||||||||  ||  || |||||||||||||||||||||||||||    
T  30503607 ccaaaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact 30503532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 30543950 - 30543875
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||| ||| || ||||||||||||||  ||  || |||||||||||||||||||||||||||    
T  30543950 ccaaaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact 30543875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 43354523 - 43354573
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  43354523 aaattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 43354573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 28991009 - 28990943
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaac-ttttaacttaaaaataacttta 78  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| |||||||| ||||||| |||||    
T  28991009 aaaataataaattcaaagttttgtacaatattttgccaaacaactttttaactaaaaaatagcttta 28990943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 35380566 - 35380505
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||| ||| |||| ||||||||| ||| ||||||||||||||||| |||||||||||||    
T  35380566 aattcaatgttttgtataatattttgccaaacaacttttaacttaaaattaactttagaact 35380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 14720185 - 14720252
Alignment:
Q  16 ataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| |||||||||||||  ||| |||||| || |||||||||| ||||| ||||    
T  14720185 ataataaattcaaagttttgtacaatattttcccaaacaacttctatcttaaaaatagctttaaaact 14720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 28869358 - 28869413
Alignment:
Q  16 ataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaat 71  Q
    |||| ||||| ||| || |||||||||||||||||| |||||||||||||||||||    
T  28869358 ataacaaatttaaatttttgtacaatattttgtcaaacaacttttaacttaaaaat 28869413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 7499573 - 7499615
Alignment:
Q  289 gaggaagaagcagctagaaggcaacaagaggagagggaaagga 331  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  7499573 gaggaagaagcagctagaagacaacaagaagagagggaaagga 7499615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 15875806 - 15875756
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    ||||| ||||||||||||||  || ||||||||||||||||||||||||||    
T  15875806 aagttttgtacaatattttgctaaacaacttttaacttaaaaataacttta 15875756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 14205436 - 14205485
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||| ||| |||||||||| ||||||||||||||||||||    
T  14205436 tgtataatattttgccaaacaacttttaaattaaaaataactttagaact 14205485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 30503800 - 30503759
Alignment:
Q  42 attttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  30503800 attttgccaaacaacttttaacttaaaaataactttagaact 30503759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 30544143 - 30544102
Alignment:
Q  42 attttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  30544143 attttgccaaacaacttttaacttaaaaataactttagaact 30544102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 15976494 - 15976554
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| | |||||||||||||| ||| || ||||||||| |||||||| |||||||||    
T  15976494 attcaaagatttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 15976554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 2001506 - 2001561
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| ||||||  ||| |||||||||||||||||||||||||| ||||    
T  2001506 aagttttgtacagtattttaccaaacaacttttaacttaaaaataactttaaaact 2001561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 7499984 - 7500035
Alignment:
Q  280 gcagagagggaggaagaagcagctagaaggcaacaagaggagagggaaagga 331  Q
    |||||| |||||||||||||||| ||||| ||||||||| |||| |||||||    
T  7499984 gcagagggggaggaagaagcagcaagaagacaacaagagaagagagaaagga 7500035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 37461874 - 37461928
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  37461874 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 37461928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 18041254 - 18041185
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| |||| |||||||||  || |||| ||||||||||||||| ||||| ||||    
T  18041254 aaaataataaatttaaagtt-tgtaaaatattttgcgaaacaacatttaacttaaaaatagctttaaaact 18041185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 20259074 - 20259112
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  20259074 tgtacaatattttgtcaaacaatttttaacttaaaaata 20259112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 39782983 - 39783024
Alignment:
Q  36 tacaatattttgtcaagcaacttttaacttaaaaataacttt 77  Q
    |||||||||||| ||| |||||||||||| ||||||||||||    
T  39782983 tacaatattttgccaaacaacttttaactgaaaaataacttt 39783024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 8847936 - 8848011
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8847936 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 8848011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 22556962 - 22557037
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  22556962 ccaaaaaaataataaattcaaagttttgtaaaatattttgtcaaacaacttttaacttaaaaataactttagaact 22557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 36190129 - 36190059
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  36190129 aaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaactcaaaaataactttagaact 36190059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 23628839 - 23628908
Alignment:
Q  14 aaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  23628839 aaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 23628908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 24303878 - 24303803
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  24303878 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaacttaaaaataactttagaact 24303803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7365799 - 7365869
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  7365799 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 7365869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 11180911 - 11180981
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  11180911 aaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 11180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 26111381 - 26111451
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  26111381 aaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 26111451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 34264702 - 34264632
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  34264702 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 34264632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 41144375 - 41144305
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  41144375 aaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaact 41144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 43117521 - 43117591
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  43117521 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaacaactttagaact 43117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 17976445 - 17976520
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||| |||||||||    
T  17976445 ccaaaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact 17976520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 40665519 - 40665593
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||||||| || | ||||||||||||||||||||||||||    
T  40665519 ccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagc-tttaacttaaaaataactttagaact 40665593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 49125543 - 49125618
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| ||||||||||| || |||  ||||||||||||||||||||||||||||||    
T  49125543 ccaaaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 49125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 1166642 - 1166712
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  1166642 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 1169124 - 1169194
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  1169124 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1169194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 6940248 - 6940178
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  6940248 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6940178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 7400279 - 7400209
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  7400279 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7400209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 10137953 - 10137883
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  10137953 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 11200836 - 11200906
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  11200836 aaaataataaattcaaaattttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 11200906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 13891066 - 13890996
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  13891066 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 13890996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 17624663 - 17624733
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| || ||||||||||||||||||||||||||||    
T  17624663 aaaataataaattcaaagttttgtataatattttgccaaacagcttttaacttaaaaataactttagaact 17624733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 18138338 - 18138408
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| ||||||||||| || |||  ||||||||||||||||||||||||||||||    
T  18138338 aaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 18138408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 26097721 - 26097651
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||| ||||    
T  26097721 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttcaaaataactttaaaact 26097651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 28116913 - 28116843
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  28116913 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 28116843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 32206666 - 32206596
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  32206666 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 32206596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 40849731 - 40849801
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||| ||||    
T  40849731 aaaataataaattcaaagttttgtacaatattttgacaaacaatttttaacttaaaaataactttataact 40849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 40950948 - 40951018
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  40950948 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 40951018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 46045857 - 46045795
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  46045857 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 46045795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 53274631 - 53274701
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  53274631 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 53274701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 55188173 - 55188243
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  55188173 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 55188243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 55991822 - 55991892
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||| |||||||| |||||||||    
T  55991822 aaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataattttagaact 55991892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 37873721 - 37873646
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||||||  || |||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  37873721 ccaaaaaaataataaattcaactttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact 37873646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 51153484 - 51153555
Alignment:
Q  10 aagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    ||||||| || ||| |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  51153484 aagaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 51153555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 11967074 - 11967004
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||| |||||||||    
T  11967074 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 11967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 27288544 - 27288474
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  27288544 aaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27288474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 55208558 - 55208488
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||| |||||||    
T  55208558 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactgtagaact 55208488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 40952044 - 40952093
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40952044 tgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 40952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 8654389 - 8654318
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    |||| |||||||||||||||||||| ||||||||| |||| ||| ||| ||||||||||||||||||||||||    
T  8654389 ccaaaaaaataataaattcaaagttttgtacaata-tttgccaaacaatttttaacttaaaaataactttaga 8654318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 20681193 - 20681268
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||| |||  ||||||||||||  ||| |||||||||||||||||||||||||| ||||    
T  20681193 ccaaaaaaataataaattcaatgtttcgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 20681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 32200791 - 32200716
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||| |||||||||||||||| ||||||||||| || ||| |||||||||| ||||||||||||||| ||||    
T  32200791 ccaaaaaagtaataaattcaaagttttgtacaatattctgccaaacaacttttaatttaaaaataactttaaaact 32200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 346677 - 346607
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| ||| ||||||||| |||| |||  |||||||||||||| |||||||||||||||    
T  346677 aaaataataaattcaatgttttgtacaatagtttgccaaagaacttttaacttaacaataactttagaact 346607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 8151213 - 8151274
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  8151213 aaattcaaagttttgtacaa-attttgtcaaacaacttttaacttaaaaataattttagaact 8151274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 29099695 - 29099625
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| | |||||||||||| ||| |||||||||||| ||||||||||||| ||||    
T  29099695 aaaataataaatttaaagttttatacaatattttgccaaacaacttttaactgaaaaataactttacaact 29099625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 32139419 - 32139481
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||| ||||    
T  32139419 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaaaact 32139481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 39651746 - 39651803
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||    
T  39651746 aaattcaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttta 39651803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 51187615 - 51187690
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||| |||||||||| || |||||| |||| || ||| |||||||||||||||||||||||| ||||||    
T  51187615 ccaaaaaaatattaaattcaaaattttgtacattattctgccaaacaacttttaacttaaaaataacttcagaact 51187690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 29346287 - 29346238
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  29346287 aattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 29346238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 35832051 - 35832002
Alignment:
Q  22 aattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  35832051 aattcaaagtt-tgtacaatattttgtcaaacaacttttaacttaaaaata 35832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 28361551 - 28361503
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataa 73  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  28361551 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataa 28361503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 30071346 - 30071414
Alignment:
Q  15 aataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||| |||||| ||||| |||||||| ||| ||||||| || ||||||||||||||| ||||    
T  30071346 aataataaatttaaagttttgtacgatattttgccaaacaactttaaagttaaaaataactttataact 30071414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 24631171 - 24631113
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    ||||||||||||||||||| || |||||||||||  ||| ||||||||||||||||||||    
T  24631171 aaaataataaattcaaagt-atttacaatatttttccaaacaacttttaacttaaaaata 24631113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 26927008 - 26926954
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||||||| |||| || ||||||||    
T  26927008 aaaataataaattcaaagtt-tgtacaatattttgtcaaacaacattaaacttaaa 26926954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 25881932 - 25881982
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataa 73  Q
    |||||||||| ||||||||||||||  || |||||||||||||||||||||    
T  25881932 attcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataa 25881982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 10262067 - 10262013
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  10262067 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 10262013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 21562388 - 21562442
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  21562388 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 21562442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 24080138 - 24080084
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  24080138 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 24080084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 43329909 - 43329963
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  43329909 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 43329963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 45472512 - 45472473
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttg 47  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  45472512 ccaaaaaaataataaattcaaagttttgtacaatattttg 45472473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 34663873 - 34663907
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttg 47  Q
    |||||||||||||||||||| ||||||||||||||    
T  34663873 aaaataataaattcaaagttttgtacaatattttg 34663907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 41986339 - 41986282
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| || ||||| ||||    
T  41986339 tcaaagtt-tgtacaatattttgtcaaacaacgtttaacttaaaattagctttaaaact 41986282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 26871668 - 26871612
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  26871668 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 26871612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 3243370 - 3243295
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  3243370 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 3243295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 36078631 - 36078556
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  36078631 ccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaccttttaacttaaaaataactttagaact 36078556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 10120614 - 10120684
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10120614 aaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 10120684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 1117983 - 1118055
Alignment:
Q  13 aaaataataaattcaaagtta--tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1117983 aaaataataaattcaaagttacatgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 1118055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 34912656 - 34912724
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  34912656 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 34912724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 38879136 - 38879211
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  38879136 ccaaaaaaataataaattcaaagttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 38879211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 970958 - 971028
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  970958 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 971028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 1835690 - 1835760
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  1835690 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1835760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 3079722 - 3079792
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||| |||||||||    
T  3079722 aaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact 3079792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 5166271 - 5166341
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  5166271 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 5166341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7233028 - 7233098
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  7233028 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7233098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7274675 - 7274745
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  7274675 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7274745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 8878124 - 8878194
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  8878124 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 8878194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 18166903 - 18166833
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  18166903 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 18166833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 24926155 - 24926085
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  24926155 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24926085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 31972287 - 31972357
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  31972287 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 31972357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 40202220 - 40202290
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| |||||||||||||| | | |||||||||||||||||||||||||||||||    
T  40202220 aaaataataaatttaaagttttgtacaatattttgcctaacaacttttaacttaaaaataactttagaact 40202290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 9799395 - 9799330
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||    
T  9799395 aaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaacaacttta 9799330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 38709708 - 38709765
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  38709708 aaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttta 38709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 4631213 - 4631281
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||    
T  4631213 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 4631281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 668364 - 668294
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || ||| |||||||||| ||| |||||||||| ||||||||||||||||||||    
T  668364 aaaataataaattcaaaattttgtgcaatattttgccaaacaacttttaatttaaaaataactttagaact 668294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 8683664 - 8683734
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||| ||||| ||| || ||||||||| ||||||||||||||||||    
T  8683664 aaaataataaattcaaagttttgtacaattttttgccaaacagcttttaactcaaaaataactttagaact 8683734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 35423791 - 35423861
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| ||||||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  35423791 aaaataataaatttaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttaagaact 35423861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 36086013 - 36085947
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  36086013 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 36085947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 41452828 - 41452890
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  41452828 aaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 41452890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 45474735 - 45474797
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  45474735 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaact 45474797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 3324334 - 3324264
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| |||||||||  || || ||||||||| ||||||||||||||||||    
T  3324334 aaaataataaattcaaagttttgtataatattttgcgaaacagcttttaactcaaaaataactttagaact 3324264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 17032875 - 17032813
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  17032875 aaattccaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 17032813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 2180018 - 2180093
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||| || ||| |||||||| |||| |||||||||  || |||||||||||||||||||||||||||||||    
T  2180018 ccaaaaaaaaaaaaaaatcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataactttagaact 2180093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 3708456 - 3708510
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  3708456 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 3708510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 11868960 - 11868906
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  11868960 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 11868906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 35360353 - 35360299
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  35360353 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 35360299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 20313294 - 20313248
Alignment:
Q  37 acaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  20313294 acaatattttgccaaacagcttttaactcaaaaataactttagaact 20313248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 37522706 - 37522763
Alignment:
Q  18 aataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataact 75  Q
    |||||| ||||| || ||||||| |||||| ||| ||| |||||||||||||||||||    
T  37522706 aataaaatcaaaattttgtacaacattttgccaaacaaattttaacttaaaaataact 37522763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 24473626 - 24473551
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  24473626 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 24473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 43119184 - 43119114
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  43119184 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43119114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 11754298 - 11754228
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  11754298 aaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 11754228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 33818164 - 33818094
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  33818164 aaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33818094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 33877632 - 33877562
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  33877632 aaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33877562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 36952788 - 36952714
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  36952788 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaac 36952714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 34652274 - 34652341
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataact 75  Q
    |||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||    
T  34652274 ccaaaaaaataataaattcaaaattttgtacaatattttgtcaaacaacttttaacttaaaaataact 34652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 39879215 - 39879140
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||| ||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||    
T  39879215 ccaaaaaaataataaattcaatgttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 39879140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 46040561 - 46040486
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  46040561 ccaaaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 11583161 - 11583231
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  11583161 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 11583231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 17585520 - 17585590
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  17585520 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17585590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 25659880 - 25659810
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  25659880 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25659810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 33373890 - 33373820
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33373890 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33373820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 33642615 - 33642685
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33642615 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33642685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 33895287 - 33895217
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33895287 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33895217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 39327113 - 39327043
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  39327113 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 39327043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 41901770 - 41901700
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  41901770 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 41901700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 45104185 - 45104255
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  45104185 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 45104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 47037201 - 47037131
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  47037201 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 47037131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 43120849 - 43120780
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||||||||||    
T  43120849 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 43120780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 1322600 - 1322525
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||| ||| |||||||||||||  ||| |||||||||| ||||||||||||||||||||    
T  1322600 ccaaaaaaataataaattcaatgttttgtacaatattttaccaaacaacttttaatttaaaaataactttagaact 1322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 17249035 - 17249110
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||||||| |||||||| |||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  17249035 ccaaaaaaataataaaatcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact 17249110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 3265121 - 3265191
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| | |||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  3265121 aaaataataaattcaaagttttatacaatattttgccaaacagcttttaactcaaaaataactttagaact 3265191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7833550 - 7833620
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| ||  |||||||| ||||||||||||||||||    
T  7833550 aaaataataaattcaaagttttgtacaatattttgccaaacagtttttaactcaaaaataactttagaact 7833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 9574866 - 9574936
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| | | || ||||||||| ||||||||||||||||||    
T  9574866 aaaataataaattcaaagttttgtacaatattttgccgaacagcttttaactcaaaaataactttagaact 9574936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 14487394 - 14487324
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||  ||| || ||||||||| ||||||||||||||||||    
T  14487394 aaaataataaattcaaagttttgtacaatatttttccaaacagcttttaactcaaaaataactttagaact 14487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 18091279 - 18091348
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||| ||||| ||||    
T  18091279 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 33831995 - 33831925
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||  |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33831995 aaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 33894157 - 33894087
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||  |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  33894157 aaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33894087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 36165591 - 36165521
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| |||  | ||||||||| ||||||||||||||||||    
T  36165591 aaaataataaattcaaagttttgtacaatattttgccaaaaagcttttaactcaaaaataactttagaact 36165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 38802310 - 38802380
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  38802310 aaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 38802380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 43123051 - 43123113
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  43123051 aaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 43123113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 40432273 - 40432208
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||||||    
T  40432273 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 40432208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 34078295 - 34078355
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  34078295 aaattcaaagttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaa 34078355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 39729262 - 39729206
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||||||||||||    
T  39729262 tcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa 39729206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 46588161 - 46588091
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| | || ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  46588161 aaaataataaattcaaagttttatataatattttgccaaacagcttttaactcaaaaataactttagaact 46588091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 17366411 - 17366355
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||    
T  17366411 tcaaagttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaa 17366355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 31638485 - 31638425
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataa 73  Q
    |||||||| ||||||||||| |||| ||||||||| ||| |||||||||||||||||||||    
T  31638485 aaaataattaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataa 31638425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 16097358 - 16097417
Alignment:
Q  24 ttcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||||||||||| ||| || |||||||||||||||||| |||||||||    
T  16097358 ttcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataattttagaact 16097417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 23730359 - 23730301
Alignment:
Q  18 aataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttt 77  Q
    ||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  23730359 aataatttcaaagtt-tgtacaatattttgccaaacaacttttaacttaaaaataacttt 23730301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 7308380 - 7308331
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  7308380 tgtacaatattttgccaaacaacttttaacttaaaaataacattagaact 7308331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 49223163 - 49223219
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||||||| |||||    
T  49223163 aaattcaaagtt-tgtacaatattttgtcaaacaacatttaacttaaaaatagcttta 49223219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 11606534 - 11606467
Alignment:
Q  16 ataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||| |||||| |||||||||||||| ||| |||||||||| ||| ||||| ||||| ||||    
T  11606534 ataataaatttaaagttttgtacaatattttgccaaacaacttttaatttagaaatagctttaaaact 11606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 49571214 - 49571276
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||| ||||||||||| |||||| ||| || |||| |||||||||||||||||||    
T  49571214 aaatttaaagttttgtacaatattgtgtcaaacaaattataacataaaaataactttagaact 49571276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 31215907 - 31215864
Alignment:
Q  40 atattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||    
T  31215907 atattttgccaaacaacttttaactcaaaaataactttagaact 31215864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 31221662 - 31221619
Alignment:
Q  40 atattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||    
T  31221662 atattttgccaaacaacttttaactcaaaaataactttagaact 31221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 16033148 - 16033091
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| || ||||| ||||    
T  16033148 tcaaagtt-tgtacaatattttgtcaaacaacatttaacttaaaagtagctttaaaact 16033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 28568815 - 28568754
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| ||||||| |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  28568815 aaatccaaagtt-tgtacaatattttgccaaacaacatttaacttaaaaatatctttaaaact 28568754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 33932934 - 33932988
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||| ||||  |||||||| ||| |||||||||| ||||||||||||||||||    
T  33932934 aaagttttgtatgatattttgccaaacaacttttaatttaaaaataactttagaa 33932988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 43124358 - 43124424
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttag 79  Q
    ||||||| ||||||||| || | || ||||||||| ||| ||| |||||||||||||||||| ||||    
T  43124358 aaaataaaaaattcaaatttttatataatattttgccaaacaaattttaacttaaaaataaccttag 43124424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 83
Target Start/End: Original strand, 45589661 - 45589691
Alignment:
Q  53 caacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||||||||||||||    
T  45589661 caacttttaacttaaaaataactttagaact 45589691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 17670003 - 17670055
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||| |||||||||||||| ||| |||| |||||||||||| ||||||||    
T  17670003 tcaaagtt-tgtacaatattttgccaaacaacatttaacttaaaagtaacttta 17670055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 15331 - 15261
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  15331 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 15261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 28472225 - 28472295
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  28472225 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 28472295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 34247825 - 34247755
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  34247825 aaaataataaattcaaagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact 34247755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 29043219 - 29043281
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  29043219 aaattcaaagttatgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 29043281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 559729 - 559801
Alignment:
Q  11 agaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  559729 agaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 559801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 6018649 - 6018577
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    |||| ||||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  6018649 ccaaaaaaataataaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaga 6018577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 6833555 - 6833622
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  6833555 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaga 6833622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 29859408 - 29859483
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||| |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||  ||||||||    
T  29859408 ccaaaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaataagcttagaact 29859483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 173132 - 173062
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  173132 aaaataataaatacaaagttttgtataatattttgtcaaacaacttttaacttaaaaataattttagaact 173062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 3850229 - 3850299
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  3850229 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 3850299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 5414628 - 5414562
Alignment:
Q  17 taataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5414628 taataaattaaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 5414562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 17505490 - 17505560
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||| |||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  17505490 aaaattataaattcaaagttttgtataatattttatcaaacaacttttaacttaaaaataactttagaact 17505560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 18593680 - 18593610
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  18593680 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 18593610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 20791550 - 20791620
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  20791550 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 20791620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 32244381 - 32244451
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||| |||||||    
T  32244381 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactgtagaact 32244451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 34207073 - 34207003
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || |||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  34207073 aaaataataaattcaaaattttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 34207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 10945708 - 10945781
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||| |||||||||||||||||||| |||| ||||||||| ||| |||||||||||||| ||||||||||||||    
T  10945708 ccaaaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttagaaataactttagaa 10945781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 33945893 - 33945824
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaac 82  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| |||||||||||||||||    
T  33945893 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 33945824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 24046627 - 24046560
Alignment:
Q  16 ataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  24046627 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24046560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7541109 - 7541179
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| || ||| ||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  7541109 aaaataataaattgaatgttttgtacaacattttgccaaacaacttttaacttaaaaataactttagaact 7541179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 24162796 - 24162866
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||||| || |||| ||||||||| ||| |||||||| ||||||||||||||||||||||    
T  24162796 aaaataataaattcaaaattttgtataatattttgccaaacaactttttacttaaaaataactttagaact 24162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 19988908 - 19988964
Alignment:
Q  27 aaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||| |||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  19988908 aaagttttgtacaatattttgccacacaacttttaacttaaaaataactttagaact 19988964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 3053984 - 3053915
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||| |||||| |||||||||||||| ||| |||| ||||||||||||||| ||||| ||||    
T  3053984 aaaataataaatttaaagtt-tgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 3053915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 18314010 - 18314074
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||||||||||| |||||||||||||| ||  |||| ||||| |||||||||||||||    
T  18314010 aaaataataaattcaaagtt-tgtacaatattttgccacacaacatttaaattaaaaataacttta 18314074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 8866970 - 8867037
Alignment:
Q  16 ataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||||||||| |   |||||||||||| ||| |||||||||||||||||||| ||||| ||||    
T  8866970 ataataaattcaaagcttcatacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 8867037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 33976006 - 33976060
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||| ||||||||||||| |||| |||||||||||    
T  33976006 aaaataataaattcaaagtt-tgtataatattttgtcaaacaacatttaacttaaa 33976060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 247422 - 247476
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  247422 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 247476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 12582527 - 12582473
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaa 68  Q
    |||||||||||||||||||| |||||||||||||| ||| |||| || ||||||||    
T  12582527 aaaataataaattcaaagtt-tgtacaatattttgccaaacaacattaaacttaaa 12582473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 28231136 - 28231075
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| || ||||||||||| ||| |||| |||||||||||| |||||||| ||||    
T  28231136 aaattcaaagtt-tgcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 28231075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 34319169 - 34319207
Alignment:
Q  34 tgtacaatattttgtcaagcaacttttaacttaaaaata 72  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  34319169 tgtacaatattttgtcaaacaacatttaacttaaaaata 34319207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 82
Target Start/End: Complemental strand, 10943179 - 10943150
Alignment:
Q  53 caacttttaacttaaaaataactttagaac 82  Q
    ||||||||||||||||||||||||||||||    
T  10943179 caacttttaacttaaaaataactttagaac 10943150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 90536 - 90463
Alignment:
Q  8 ccaagaaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||||||||    
T  90536 ccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 90463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 110574 - 110529
Alignment:
Q  36 tacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    ||||||||||||  || |||||||||||||||||||||||||||||    
T  110574 tacaatattttgctaaacaacttttaacttaaaaataactttagaa 110529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 6373 - 6306
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttaga 80  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  6373 aaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaga 6306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 25712 - 25782
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  25712 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 4582 - 4512
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||| | ||| || ||||||||| ||||||||||||||||||    
T  4582 aaaataataaattcaaagttttgtacaatatttggccaaacagcttttaactcaaaaataactttagaact 4512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 7452 - 7522
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||| ||||| |||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  7452 aaaataataaattctaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 7362 - 7292
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||||||||||||| |||  | ||||||||| ||||||||||||||||||    
T  7362 aaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact 7292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 1478 - 1548
Alignment:
Q  13 aaaataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||||||||||| |||| ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  1478 aaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 132664 - 132730
Alignment:
Q  16 ataataaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||| |||||| | |||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  132664 ataataaattgaaagtt-tatacaatattttgccaaacaacttttaaattaaaaataactttagaact 132730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 5793 - 5732
Alignment:
Q  23 attcaaagttatgtacaatattttgtcaagcaacttttaacttaa-aaataactttagaact 83  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||| ||||    
T  5793 attcaaagttttgtacaatatcttgtcaaacaacttttaacttaataaataactttaaaact 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 138091 - 138031
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaa 81  Q
    |||||||||||  ||| ||||||||||  || |||||||||||||||||||||||||||||    
T  138091 aaattcaaagtcttgtgcaatattttgctaaacaacttttaacttaaaaataactttagaa 138031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 229101 - 229156
Alignment:
Q  28 aagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||| |||||||||||||  ||| |||||||||||||||||||||||||| ||||    
T  229101 aagttttgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 229156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 1083 - 1127
Alignment:
Q  39 aatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||    
T  1083 aatattttgccaaacaacttttaacttaaaaataactttaaaact 1127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 31633 - 31572
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| || ||||||||||| ||| |||| |||||||||||| |||||||| ||||    
T  31633 aaattcaaagtt-tgcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 31572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 99393 - 99454
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||||||| |||||||||||||||||| |||  |||||||||||| || ||||| ||||    
T  99393 aaattcaaagtt-tgtacaatattttgtcaaacaatatttaacttaaaagtagctttaaaact 99454  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 50262 - 50319
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| ||||| ||||||||| ||||| ||||    
T  50262 tcaaagtt-tgtacaatattttgtcaaacaacatttaatttaaaaatagctttaaaact 50319  T

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Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 57795 - 57852
Alignment:
Q  25 tcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 83  Q
    |||||||| |||||||||||||||||| |||| ||||| ||||||||| ||||| ||||    
T  57795 tcaaagtt-tgtacaatattttgtcaaacaacatttaatttaaaaatagctttaaaact 57852  T

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Target: scaffold0095 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 236 - 292
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  236 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 292  T

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Target: scaffold0095; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 1726 - 1782
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  1726 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 1782  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 55458 - 55402
Alignment:
Q  21 aaattcaaagttatgtacaatattttgtcaagcaacttttaacttaaaaataacttta 78  Q
    |||||||||||| |||||||||||||  ||| |||| ||||||||||||||| |||||    
T  55458 aaattcaaagtt-tgtacaatatttttgcaaacaacatttaacttaaaaatagcttta 55402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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