View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0673_high_41 (Length: 261)
Name: NF0673_high_41
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0673_high_41 |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 29 - 254
Target Start/End: Complemental strand, 9466471 - 9466246
Alignment:
| Q |
29 |
accatgggcatactaccaaacaacgtgctgaatgtctgggtactacgcgtgccaatgccggtgcttcagagctcaaacttaatgatcacagagggggtgc |
128 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9466471 |
accacgggcatactaccaaacaacgtgctgaatgtctgggtactacgcgtgccaatgccggtgcttcagagctcaaacttaatgatcacagagggggtgc |
9466372 |
T |
|
| Q |
129 |
tgctccttatataggagtgttgagctaacctctaactagtagtattctttaaaagactgtgtaactcaccgaactctgatcagttagttacacgacagtt |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
9466371 |
tgctccttatataggagtgttgagctaacctctaactagtagtattctttaaaaggctgtgtaacacaccgaactctgatcagttagttacacgacagtt |
9466272 |
T |
|
| Q |
229 |
tatactcaagatgtatgcctatgcta |
254 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
9466271 |
tatactcaagatgtatgcctatgcta |
9466246 |
T |
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