View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0673_high_61 (Length: 216)
Name: NF0673_high_61
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0673_high_61 |
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Alignment Details
Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 34090210 - 34090305
Alignment:
| Q |
67 |
agcagcacagaaaacggaagaagttcttgagcagccaaaacacaaagcggcagaagaatatgagaatcagcaaagcaatcagccctacccaaaaaa |
162 |
Q |
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| T |
34090210 |
agcaacacataaaacggaagaagttcttgagcagccaaaacacaaagcggcagaagaatatgagaatcagcaaagcaatcagccctacccaaaaaa |
34090305 |
T |
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Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 34093225 - 34093292
Alignment:
| Q |
78 |
aaacggaagaagttcttgagcagccaaaacacaaagcggcagaagaatatgagaatcagcaaagcaat |
145 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
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| T |
34093225 |
aaacggaagaacatcttgagcagccaaaacacaaagcggcagaaaaatatgagaatcagcaaaacaat |
34093292 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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