View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0673_low_106 (Length: 251)

Name: NF0673_low_106
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0673_low_106
NF0673_low_106
[»] chr5 (4 HSPs)
chr5 (32-251)||(18313488-18313707)
chr5 (30-195)||(34378170-34378336)
chr5 (33-195)||(698433-698596)
chr5 (31-195)||(18593315-18593480)
[»] chr3 (13 HSPs)
chr3 (32-195)||(31482956-31483119)
chr3 (31-195)||(34475600-34475763)
chr3 (30-205)||(47235761-47235936)
chr3 (31-205)||(45163918-45164092)
chr3 (31-205)||(20611846-20612019)
chr3 (31-205)||(2392350-2392524)
chr3 (31-186)||(53247981-53248138)
chr3 (31-195)||(17551029-17551189)
chr3 (31-158)||(2394114-2394242)
chr3 (30-203)||(43012440-43012613)
chr3 (28-203)||(19176567-19176744)
chr3 (31-106)||(30352285-30352359)
chr3 (85-205)||(40023472-40023590)
[»] chr7 (13 HSPs)
chr7 (22-195)||(47325720-47325894)
chr7 (31-195)||(5860132-5860297)
chr7 (30-195)||(44353406-44353573)
chr7 (53-195)||(37795061-37795204)
chr7 (31-195)||(38306333-38306498)
chr7 (32-195)||(3419500-3419665)
chr7 (31-195)||(10244254-10244419)
chr7 (31-205)||(25160878-25161048)
chr7 (31-136)||(31971978-31972084)
chr7 (85-186)||(33435191-33435291)
chr7 (30-137)||(3867246-3867354)
chr7 (85-205)||(34390025-34390143)
chr7 (53-203)||(41089614-41089764)
[»] chr2 (4 HSPs)
chr2 (31-195)||(10524173-10524337)
chr2 (31-195)||(39338709-39338874)
chr2 (31-195)||(17116723-17116889)
chr2 (31-180)||(387262-387411)
[»] chr8 (12 HSPs)
chr8 (30-195)||(20138498-20138665)
chr8 (31-195)||(9519571-9519737)
chr8 (32-195)||(12898120-12898283)
chr8 (31-194)||(31207206-31207370)
chr8 (31-195)||(37986702-37986867)
chr8 (31-195)||(24995238-24995404)
chr8 (31-195)||(32066139-32066304)
chr8 (31-195)||(41893246-41893410)
chr8 (89-195)||(16457364-16457470)
chr8 (33-195)||(34388852-34389014)
chr8 (85-164)||(22773602-22773681)
chr8 (98-195)||(36630909-36631006)
[»] chr1 (9 HSPs)
chr1 (31-205)||(24449774-24449948)
chr1 (31-195)||(46692663-46692828)
chr1 (31-195)||(5459233-5459398)
chr1 (36-195)||(31585608-31585769)
chr1 (33-194)||(41920525-41920692)
chr1 (80-194)||(30685798-30685912)
chr1 (31-195)||(5389266-5389430)
chr1 (30-160)||(6764224-6764355)
chr1 (98-202)||(24684390-24684493)
[»] chr4 (5 HSPs)
chr4 (31-195)||(8255099-8255264)
chr4 (31-195)||(8268517-8268682)
chr4 (99-195)||(30964513-30964609)
chr4 (35-195)||(30167412-30167573)
chr4 (41-195)||(4305797-4305951)
[»] scaffold0343 (1 HSPs)
scaffold0343 (31-195)||(5777-5943)
[»] scaffold0068 (1 HSPs)
scaffold0068 (53-205)||(35640-35790)
[»] chr6 (2 HSPs)
chr6 (32-195)||(3117565-3117729)
chr6 (31-132)||(10541967-10542069)


Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 32 - 251
Target Start/End: Original strand, 18313488 - 18313707
Alignment:
Q  32 catcgtcactactcacccatgaagaacaccctaaagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  18313488 catcgtcactactcacccatgaagaacaccctaaagaaaaactccaaaatcctaaaacccaaactaagccacatttcgaagagcacctaaacgaatgatc 18313587  T
Q  132 atgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaag-cccaaaaaaccaacttaaagtttatttcagttttcgttttcga 230  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||    
T  18313588 atgcagctatcacaaacctcgcgaccttcaatccaccgaaagagtacaacacaaagtccaaaaaaaccaactt-aagtttatttcagttttcgtttttga 18313686  T
Q  231 gaggttcacagtcttgttatg 251  Q
    |||||||||||||||||||||    
T  18313687 gaggttcacagtcttgttatg 18313707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 195
Target Start/End: Complemental strand, 34378336 - 34378170
Alignment:
Q  30 tccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatg 128  Q
    |||||||||||||||||||||  ||||||||||| || | |||||||  ||| || |||||||||||| ||||||||| ||||||||| |||| |||| |    
T  34378336 tccatcgtcactactcacccacaaagaacaccctcaaaataaaactctcaaaccccaacacccaagctgagccacattacgaagagcatctaaccgaagg 34378237  T
Q  129 atcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||  || ||||||||||||||||||||| |  || |||||||||| |||| ||||||||||||||    
T  34378236 atcaaacaactatcacaaacctcgcgacctccggtccaccgaaagagcacaaaacaaagcccaaaaa 34378170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 195
Target Start/End: Complemental strand, 698596 - 698433
Alignment:
Q  33 atcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatc 131  Q
    ||||||||||||||||||  |||||||||||  | | |||||||  | | || |||||||||||| ||||||||||| |||||||||||| |||| |||     
T  698596 atcgtcactactcacccacaaagaacaccctccaaataaaactctcagaccccaacacccaagctgagccacatttcaaagagcacctaaccgaaggatt 698497  T
Q  132 atgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    |||||||||||||||||||||| ||||   | | || |||||||||||||||||||||||||||    
T  698496 atgcagctatcacaaacctcgcaacctctgaaccacagaaagagtacaacacaaagcccaaaaa 698433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 18593480 - 18593315
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  ||||||| |||  | | |||||||| | | || |||||||||| | |||||||||||||||| ||||||| |||| ||    
T  18593480 ccatcgtcactactcacccacaaagaacatcctccaaataaaactcccagaccccaacacccaagttgagccacatttcgaagaacacctaaccgaagga 18593381  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||| |||||||||| |||||||||| | | | |||||||||| ||||||| |||||||||||    
T  18593380 tcatgcacctatcacaaatctcgcgacctccgaaccaccgaaagagcacaacactaagcccaaaaa 18593315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 31483119 - 31482956
Alignment:
Q  32 catcgtcactactcacccatgaagaacaccctaaagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatc 131  Q
    ||||||||||||| |||||  ||||||||||| || ||||||||  ||| || |||||| ||||| |||||||||||||||||||||||| |||| ||||    
T  31483119 catcgtcactactaacccacaaagaacacccttaaaaaaaactctcaaaccccaacacctaagctgagccacatttcgaagagcacctaaccgaaggatc 31483020  T
Q  132 atgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  31483019 atgcagctatcacaaacctcgcgacctccaatccaccgaaagagcacaacacaaagcccaaaaa 31482956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 34475600 - 34475763
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgat 130  Q
    ||||||||||||||||||||  ||||||||||| || ||||||||  | | || |||||| ||||| || ||||||||||||||||||||| |||| |||    
T  34475600 ccatcgtcactactcacccacaaagaacacccttaa-aaaaactctcataccccaacacctaagctgagtcacatttcgaagagcacctaaccgaaggat 34475698  T
Q  131 catgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||| |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  34475699 catacagctatcacaaacctcgcgacctccaatccaccgaaagagcacaacacaaagcccaaaaa 34475763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 205
Target Start/End: Complemental strand, 47235936 - 47235761
Alignment:
Q  30 tccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatg 128  Q
    |||||||||||||||||||||  ||||||||||| || | |||||||  | | || |||||||||||| | |||||||||||||||||||||| |||| |    
T  47235936 tccatcgtcactactcacccacaaagaacaccctcaaaataaaactcgcagaccccaacacccaagctgaaccacatttcgaagagcacctaaccgaagg 47235837  T
Q  129 atcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaacttaa 205  Q
    ||||||||||||||||||||||||||||||   ||| |||||||||| | ||||||||||||| |||||||||||||    
T  47235836 atcatgcagctatcacaaacctcgcgacctctgatccaccgaaagagcaaaacacaaagccca-aaaaccaacttaa 47235761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 45164092 - 45163918
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    |||||||||||| ||||| |  || |||||||| || | |||||||| | | || ||||||||||||||||||||||||||||||||||||| |||| ||    
T  45164092 ccatcgtcactaatcacctacaaataacaccctcaaaataaaactcctagaccccaacacccaagctaagccacatttcgaagagcacctaaccgaagga 45163993  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaacttaa 205  Q
    ||||||||||||||||||| ||| ||||| | ||| |||||||||| ||||||||||||||| |||||||||||||    
T  45163992 tcatgcagctatcacaaacttcgtgacctccgatccaccgaaagagcacaacacaaagccca-aaaaccaacttaa 45163918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 20612019 - 20611846
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  ||||||||||| |  | |||||||| | | || |||||||||||| || ||||||||||||||||||||| |||| ||    
T  20612019 ccatcgtcactactcacccacaaagaacaccctcagaataaaactcctagaccc-aacacccaagctgagtcacatttcgaagagcacctaaccgaagga 20611921  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaacttaa 205  Q
    |||| |||||||||||||||||||||||| | ||| |||||||||| ||||| ||||||||| |||||||||||||    
T  20611920 tcattcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacgcaaagccca-aaaaccaacttaa 20611846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 2392350 - 2392524
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  || ||||||   || | |||||||| | | || |||||||||||| |||||||||| ||||||  ||||| |||| ||    
T  2392350 ccatcgtcactactcacccacaaataacacctacaaaataaaactcctagaccccaacacccaagctgagccacattttgaagagatcctaaccgaagga 2392449  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaacttaa 205  Q
    ||||||||||| ||||||||||||||||| | ||| |||||||||| |||||||||||||| ||||||||||||||    
T  2392450 tcatgcagctagcacaaacctcgcgacctccgatccaccgaaagagcacaacacaaagccc-aaaaaccaacttaa 2392524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 53248138 - 53247981
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccct--aaagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatg 128  Q
    ||||||||||||||||||||  |||||||| ||  ||| ||||||||  | | || ||||||||| || |||||||||||||||||||| ||| |||| |    
T  53248138 ccatcgtcactactcacccacaaagaacactctcaaaataaaaactctcagaccccaacacccaaactgagccacatttcgaagagcacataaccgaagg 53248039  T
Q  129 atcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaa 186  Q
    ||||| || ||||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  53248038 atcatacaactatcacaaacctcgcgacctccaatccaccgaaagagcacaacacaaa 53247981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 17551189 - 17551029
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    |||||||||||||||||| |  ||||||||||| || | |||||||  | | || ||||||||| || |||||||||||||||||||||||| |     |    
T  17551189 ccatcgtcactactcaccgacaaagaacaccctcaaaataaaactctcagaccccaacacccaaactgagccacatttcgaagagcacctaacc-----a 17551095  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||||||||||| | ||  | |||||||| |||||||||||||||||||    
T  17551094 tcatgcagctatcacaaacctcgcgacctccgatgcatcgaaagagcacaacacaaagcccaaaaa 17551029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 2394114 - 2394242
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  || ||||||   || | |||||||| | | || |||||||||||| |||||||||| ||||||  ||||| |||| ||    
T  2394114 ccatcgtcactactcacccacaaataacacctacaaaataaaactcctagaccccaacacccaagctgagccacattttgaagagatcctaaccgaagga 2394213  T
Q  130 tcatgcagctatcacaaacctcgcgacct 158  Q
    ||||||||||| |||||||||||||||||    
T  2394214 tcatgcagctagcacaaacctcgcgacct 2394242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 43012613 - 43012440
Alignment:
Q  30 tccatcgtcactactcacccatgaagaacaccct-aaagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatg 128  Q
    ||||||| |||||||||||    ||||||||||| |||  |||||||| | | || |||||||||||| |||||||||||||||||||||| | |||| |    
T  43012613 tccatcgccactactcacctccaaagaacaccctcaaattaaaactcctagaccccaacacccaagctgagccacatttcgaagagcacctgaccgaacg 43012514  T
Q  129 atcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaactt 203  Q
    |||||||| ||  ||| |||||||||||||   ||  |||||||||| |||| |||||  |  ||||||||||||    
T  43012513 atcatgcaacttccac-aacctcgcgacctctgattcaccgaaagagcacaaaacaaaagctcaaaaaccaactt 43012440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 203
Target Start/End: Complemental strand, 19176744 - 19176567
Alignment:
Q  28 catccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacg-- 124  Q
    |||||||||||||||||||||| | ||||||||||| || | ||||| || | | ||  ||||||||||| ||||||||| |||||||||||| | ||      
T  19176744 catccatcgtcactactcacccctaaagaacaccctcaaaataaaacacccagaccccgacacccaagctgagccacattacgaagagcacctgaccgaa 19176645  T
Q  125 aatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaactt 203  Q
    || ||||||||||||  ||| ||||| ||||||| | ||| ||| |||||| ||||  ||||  || ||||||||||||    
T  19176644 aaggatcatgcagcttccac-aaccttgcgacctccgatccaccaaaagagcacaaatcaaaagcccaaaaaccaactt 19176567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 30352285 - 30352359
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaagaaaaactccaaaatcctaacacccaagctaagccacatt 106  Q
    |||||||||||||||| |||  |||||||||||||| ||||||||| | | || |||||||||||| |||||||||    
T  30352285 ccatcgtcactactcatccacaaagaacaccctaaa-aaaaactccgagaccccaacacccaagctgagccacatt 30352359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 40023472 - 40023590
Alignment:
Q  85 aacacccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacaca 184  Q
    ||||||| |||| ||||||||| |||| ||| ||||| ||||||| |||||||||  ||||| |||| || |||   ||| |||||||||| |||| |||    
T  40023472 aacaccctagctgagccacatt-cgaaaagctcctaaccgaatgaacatgcagcttccacaa-cctcccgtcctctgatccaccgaaagagcacaaaaca 40023569  T
Q  185 aagcccaaaaaaccaacttaa 205  Q
    ||  || ||||||||||||||    
T  40023570 aaagcccaaaaaccaacttaa 40023590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 47325720 - 47325894
Alignment:
Q  22 catcatcatccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcaccta 120  Q
    |||||||  ||||||||||||||||||||  ||||||||||| || | |||||||| | | || |||||||||||| |||||||||||||||||||||||    
T  47325720 catcatcgcccatcgtcactactcacccacaaagaacaccctcaaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcaccta 47325819  T
Q  121 aacgaatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    | |||| |||||| |||||||||||||||||||||||| | ||| | |||||||| ||| |||||||||||||||    
T  47325820 accgaaggatcattcagctatcacaaacctcgcgacctccgatccatcgaaagagcacagcacaaagcccaaaaa 47325894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 5860132 - 5860297
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    |||||||||||||||| |||  ||||||||||| || | |||||||| | | || |||||||||||| ||||||||||||||||||||||||  ||| ||    
T  5860132 ccatcgtcactactcatccacaaagaacaccctgaaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaactgaagga 5860231  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||||||||||| | | | |||||||||| |||||||||||||||||||    
T  5860232 tcatgcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaacacaaagcccaaaaa 5860297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 195
Target Start/End: Original strand, 44353406 - 44353573
Alignment:
Q  30 tccatcgtcactactcacccatgaagaacaccctaaagaa--aaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaat 127  Q
    ||||||||||||||||||| |  ||||||||||| || ||  ||||||| | | || |||||||||||   | ||||||||||||||||||||| ||||     
T  44353406 tccatcgtcactactcacctacaaagaacaccctcaaaaataaaactcccagaccccaacacccaagccgggtcacatttcgaagagcacctaaccgaag 44353505  T
Q  128 gatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||||||    
T  44353506 gatcatgcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacacaaagcccaaaaa 44353573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 195
Target Start/End: Complemental strand, 37795204 - 37795061
Alignment:
Q  53 aagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctc 151  Q
    ||||||||||| || | |||||||  ||| || |||||||||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  37795204 aagaacaccctcaaaataaaactctcaaaccccaacacccaagctgagccacagttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctc 37795105  T
Q  152 gcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||| | | | |||||||||| |||||||||||||||||||    
T  37795104 gcgacctccgaaccaccgaaagagcacaacacaaagcccaaaaa 37795061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 38306498 - 38306333
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    |||||||||||||||||| |  ||||||||||| || | |||||||  | | || |||||||||||| |||||||| ||||||||||| ||| |||| ||    
T  38306498 ccatcgtcactactcacctacaaagaacaccctcaaaataaaactcacagaccccaacacccaagctgagccacatatcgaagagcacttaaccgaagga 38306399  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||||||||||| | | | | |||||||| |||||||||||||||||||    
T  38306398 tcatgcagctatcacaaacctcgcgacctccgaaccatcgaaagagcacaacacaaagcccaaaaa 38306333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 3419500 - 3419665
Alignment:
Q  32 catcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgat 130  Q
    |||||||||||||||| ||  ||||||||||| || | |||||||| ||| || |||||||||| ||||||||| ||||||| |||||||| |||| |||    
T  3419500 catcgtcactactcactcacaaagaacacccttaaaataaaactcccaaaccccaacacccaagttaagccacaattcgaagcgcacctaaccgaaggat 3419599  T
Q  131 catgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtaca-acacaaagcccaaaaa 195  Q
    || ||||||||||||||||| | |||||   ||| |||||||||| ||| | ||||||||||||||    
T  3419600 caagcagctatcacaaaccttgtgacctctgatccaccgaaagagcacagaaacaaagcccaaaaa 3419665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 10244419 - 10244254
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacacccta-aagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  |||| ||||||  ||  |||| ||| | | || |||||||||||| ||||||| ||| |||||||||||| |||| ||    
T  10244419 ccatcgtcactactcacccacaaagaccaccctccaactaaaaatcccagacccaaacacccaagctgagccacaattcaaagagcacctaaccgaagga 10244320  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||| ||||||||||||||||||||| | | | || ||||||| ||||||||||| |||||||    
T  10244319 tcatgcaactatcacaaacctcgcgacctccgaaccactgaaagagcacaacacaaaggccaaaaa 10244254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 25161048 - 25160878
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgat 130  Q
    ||||||||||||||||||||  ||||||||| | || ||||||||  | | || |||| | ||| | ||||||||||| ||||||||||||  ||| |||    
T  25161048 ccatcgtcactactcacccacaaagaacacctttaa-aaaaactctcagaccccaacatctaagttgagccacatttccaagagcacctaactgaaggat 25160950  T
Q  131 catgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaacttaa 205  Q
    ||  |||||||||||||||| | ||||| ||||| |||||||||| |||||||  ||||| ||||||||||||||    
T  25160949 cacacagctatcacaaaccttgagacctccaatccaccgaaagagcacaacac--agccc-aaaaaccaacttaa 25160878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 31971978 - 31972084
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  |||||||||||  | | |||||||| | | || |||||||||||| |||||||||||||||||||||||| |||| ||    
T  31971978 ccatcgtcactactcacccacaaagaacaccctccaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaagga 31972077  T
Q  130 tcatgca 136  Q
    |||||||    
T  31972078 tcatgca 31972084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 33435291 - 33435191
Alignment:
Q  85 aacacccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacaca 184  Q
    |||| ||||||| ||||||| |||||||||||||| | |||| ||||||| |||| |||| ||||||||||||| | ||| |||||||||| |||| |||    
T  33435291 aacaaccaagctgagccacaattcgaagagcacctgaccgaaggatcatgtagctttcac-aacctcgcgacctccgatccaccgaaagagcacaaaaca 33435193  T
Q  185 aa 186  Q
    ||    
T  33435192 aa 33435191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 3867354 - 3867246
Alignment:
Q  30 tccatcgtcactactcacccatgaagaacaccct--aaagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaat 127  Q
    ||||||||||||||||||||   |||||||||||  ||| ||||  |||| | ||| |||||||||||| |||||||| ||||||||||||| | | ||     
T  3867354 tccatcgtcactactcacccccaaagaacaccctcaaaataaaacttccatactcc-aacacccaagctgagccacatatcgaagagcacctgaccaaag 3867256  T
Q  128 gatcatgcag 137  Q
    ||||||||||    
T  3867255 gatcatgcag 3867246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 34390143 - 34390025
Alignment:
Q  85 aacacccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacaca 184  Q
    |||||||||| | |||||||||| ||| ||| ||||| ||||||| |||||||||  ||||| |||| |||||| | ||| |||||||||| |||| | |    
T  34390143 aacacccaagttgagccacattt-gaaaagctcctaatcgaatgaacatgcagcttccacaa-cctctcgacctccgatccaccgaaagagcacaaaata 34390046  T
Q  185 aagcccaaaaaaccaacttaa 205  Q
    ||  || ||||||||||||||    
T  34390045 aaagcccaaaaaccaacttaa 34390025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 203
Target Start/End: Original strand, 41089614 - 41089764
Alignment:
Q  53 aagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctc 151  Q
    ||||||||||| || | |||||||| | | |||||||||||   | ||| ||| |||||||||||||| ||||||  |||||||||||  ||| ||||||    
T  41089614 aagaacaccctcaaaataaaactcccagaccctaacacccatcttgagctacacttcgaagagcacctcaacgaagaatcatgcagcttccac-aacctc 41089712  T
Q  152 gcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaactt 203  Q
    ||||||| | ||| |||||||||  |||| |||||  |  ||||||||||||    
T  41089713 gcgacctccgatccaccgaaagatcacaaaacaaaagctcaaaaaccaactt 41089764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 10524337 - 10524173
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  |||||||||||  | | |||||||| ||| || |||||||||||| |||||||| ||||||||||||||| |||| ||    
T  10524337 ccatcgtcactactcacccacaaagaacaccctccaaataaaactcccaaaccccaacacccaagctgagccacatatcgaagagcacctaaccgaagga 10524238  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||||||||||| | | | |||||||||| |||||||||||||||||||    
T  10524237 tcatgcagctatcacaaacctcgcgacctccgaac-accgaaagagcacaacacaaagcccaaaaa 10524173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 39338709 - 39338874
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  ||||||||||| || | |||||||| | | |  |||||||||||| || |||| |||||||||||||||| |||| ||    
T  39338709 ccatcgtcactactcacccacaaagaacaccctcaaaataaaactcccagacctcaacacccaagctgagtcacaattcgaagagcacctaaccgaagga 39338808  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    |||| |||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||||||    
T  39338809 tcattcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacacaaagcccaaaaa 39338874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 17116723 - 17116889
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccct--aaagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatg 128  Q
    ||||||||| ||||||||||  |||||||||||  ||| ||||||||  | | || |||||||||||| ||||||||| |||||||||||||| |||  |    
T  17116723 ccatcgtcattactcacccacaaagaacaccctcaaaataaaaactctcagaccccaacacccaagctgagccacattacgaagagcacctaaccgatgg 17116822  T
Q  129 atcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    |||| | || |||||||||||||||||||| ||||||| ||||| || |||| |||||||| |||||    
T  17116823 atcaagtagatatcacaaacctcgcgacctccaatctatcgaaaaagcacaaaacaaagcctaaaaa 17116889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 387411 - 387262
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    |||||||||||| ||||||   ||||||||||| || | |||||||| | | || |||||||||||| |||||| | ||||||||||||| |  ||||||    
T  387411 ccatcgtcactattcacccccaaagaacaccctcaaaataaaactcccagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatga 387312  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaa 180  Q
     ||||||||| ||  |||||||| ||||| | ||| ||| |||||| ||||    
T  387311 acatgcagct-tccaaaacctcgtgacctccgatccaccaaaagagcacaa 387262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 195
Target Start/End: Complemental strand, 20138665 - 20138498
Alignment:
Q  30 tccatcgtcactactcacccatgaagaacaccctaaagaa--aaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaat 127  Q
    ||||||||||||||||||| |  ||||||||||| || ||  ||||||| | | || |||||||||||   | ||||||||||||||||||||| ||||     
T  20138665 tccatcgtcactactcacctacaaagaacaccctcaaaaataaaactcccagaccccaacacccaagccgggtcacatttcgaagagcacctaaccgaag 20138566  T
Q  128 gatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||||||    
T  20138565 gatcatgcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacacaaagcccaaaaa 20138498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 9519737 - 9519571
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactc-caaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatg 128  Q
    ||||||||||||||||||||  ||||||||||| || | ||||||| || |  || |||||||||||| ||||| |||||||||||||||||| ||||||    
T  9519737 ccatcgtcactactcacccacaaagaacaccctcaaaataaaactctcagacccccaacacccaagctgagccatatttcgaagagcacctaaccgaatg 9519638  T
Q  129 atcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    |||||||||||||||||||| |||| |||| | | | |||||||||| |||||||||||||||||||    
T  9519637 atcatgcagctatcacaaacttcgcaacctccgacccaccgaaagagcacaacacaaagcccaaaaa 9519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 12898120 - 12898283
Alignment:
Q  32 catcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgat 130  Q
    |||||||||||||||||||  ||||||||||| || | ||||||| || | || |||||||||||| |||||||||||||||||||||||| |||| |||    
T  12898120 catcgtcactactcacccacaaagaacaccctcaaaataaaactctaagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaaggat 12898219  T
Q  131 catgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    || ||||||||||||||||||||||||| | | | | |||||||| |||||||||||||| ||||    
T  12898220 ca-gcagctatcacaaacctcgcgacctccgaaccatcgaaagagcacaacacaaagccccaaaa 12898283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 31207206 - 31207370
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  ||||||||||| || | |||||||| | |  | |||||||||||| |||||||||||||||||||||||| |||| |     
T  31207206 ccatcgtcactactcacccacaaagaacaccctcaaaataaaactcccatactccaacacccaagctgagccacatttcgaagagcacctaaccgaaggg 31207305  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaa 194  Q
    |||| |||||||||||||||||||||||| | ||| ||||||| || |||||||||| |||||||    
T  31207306 tcattcagctatcacaaacctcgcgacctccgatccaccgaaaaagcacaacacaaatcccaaaa 31207370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 37986702 - 37986867
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||| ||||||||||  |||||||||||  | | |||||||| | | |  |||||||||||| |||||||||||||||||||||||| |||| ||    
T  37986702 ccatcgtcattactcacccacaaagaacaccctccaaataaaactcccagaccgaaacacccaagctgagccacatttcgaagagcacctaaccgaagga 37986801  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||| ||||||||||||||||||||||||| | | | |||||||||| |||||||||||| ||||||    
T  37986802 tcaggcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaacacaaagcacaaaaa 37986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 24995238 - 24995404
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcct-aacacccaagctaagccacatttcgaagagcacctaaacgaatg 128  Q
    ||||||||||||||||| ||  ||||||||||| || | |||||||| | | ||  |||||||||||| ||||| |||||||||||||||||| |||| |    
T  24995238 ccatcgtcactactcacgcacaaagaacaccctcaaaataaaactcctagacccccaacacccaagctgagccatatttcgaagagcacctaaccgaagg 24995337  T
Q  129 atcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||||||||||||   | | || ||||||| |||||||||||||||||||    
T  24995338 atcatgcagctatcacaaacctcgcgacctctgacccactgaaagagcacaacacaaagcccaaaaa 24995404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 32066139 - 32066304
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||| ||  |||||||||||  | | |||||||  | | || |||||||||||| | ||||||||| ||||||| |||| |||||||    
T  32066139 ccatcgtcactactcactcacaaagaacaccctccaaataaaactctcagaccccaacacccaagctgaaccacatttcaaagagcatctaaccgaatga 32066238  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    |||||||||||||||||||||||| ||||   | | |||||||||| |||||||||||||||||||    
T  32066239 tcatgcagctatcacaaacctcgcaacctctgaaccaccgaaagagcacaacacaaagcccaaaaa 32066304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 41893246 - 41893410
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaagaaa-aactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  ||||||||||| || | | |||||| | | |  |||||||||||| ||||||||||||||||| ||||| | ||| ||    
T  41893246 ccatcgtcactactcacccacaaagaacaccctgaaaatagaactcccagacctcaacacccaagctgagccacatttcgaagagtacctata-gaagga 41893344  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||| |||||||   | | ||| |||||| |||||||||||||||||||    
T  41893345 tcatgcagctatcacaaaccttgcgacctcttaaccaccaaaagagcacaacacaaagcccaaaaa 41893410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 16457364 - 16457470
Alignment:
Q  89 cccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagc 188  Q
    |||||||| ||||||||||| |||||||||||| |  | |||||||||||||||||||||||| |||| | | | | |||||||||| ||||||||||||    
T  16457364 cccaagctgagccacatttcaaagagcacctaaccacaagatcatgcagctatcacaaacctcacgacatccgaaccaccgaaagagcacaacacaaagc 16457463  T
Q  189 ccaaaaa 195  Q
    | |||||    
T  16457464 ctaaaaa 16457470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 195
Target Start/End: Original strand, 34388852 - 34389014
Alignment:
Q  33 atcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatc 131  Q
    ||||||||||||||||||  ||||||||||| || | |||||||  | | || |||||||||||| ||||||||   ||||| |||||||  ||| ||||    
T  34388852 atcgtcactactcacccacaaagaacaccctcaaaataaaactctcataccccaacacccaagctgagccacatgatgaagaacacctaactgaaggatc 34388951  T
Q  132 atgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    |   |||||||||||||||| |||||| | ||| ||||||| || |||||||||||||||||||    
T  34388952 act-agctatcacaaacctcacgacctacgatccaccgaaatagcacaacacaaagcccaaaaa 34389014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 22773681 - 22773602
Alignment:
Q  85 aacacccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatc 164  Q
    ||||||||| || ||||||||||||||||||||||||  ||| ||||||| || |||||||||||||| ||||| |||||    
T  22773681 aacacccaaactgagccacatttcgaagagcacctaacagaaggatcatgtagatatcacaaacctcgtgacctccaatc 22773602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 195
Target Start/End: Complemental strand, 36631006 - 36630909
Alignment:
Q  98 agccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacac-aaagcccaaaaa 195  Q
    |||||||||||||||||||||| | |||| ||||||||||||  ||| ||||||||||||| | ||| | |||||||| |||| || ||||||||||||    
T  36631006 agccacatttcgaagagcacctgaccgaaggatcatgcagctcccac-aacctcgcgacctccgatccatcgaaagagcacaaaacaaaagcccaaaaa 36630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 205
Target Start/End: Original strand, 24449774 - 24449948
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  || |||||||| || | |||||||| | | || |||||||||||| |||| ||||||||||||||||||| |||| ||    
T  24449774 ccatcgtcactactcacccacaaataacaccctcaaaataaaactcctagaccccaacacccaagctgagccgcatttcgaagagcacctaaccgaagga 24449873  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaacttaa 205  Q
    ||||||| ||||||||||||||||||||| | ||| ||| |||||| |||||||||| ||| ||||||||||||||    
T  24449874 tcatgcaactatcacaaacctcgcgacctccgatccaccaaaagagcacaacacaaatccc-aaaaaccaacttaa 24449948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 46692663 - 46692828
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  |||||||||||  | | |||||| | | | || |||||||||||| |||||||||||||||||||| ||| || | ||    
T  46692663 ccatcgtcactactcacccacaaagaacaccctccaaataaaacttccagaccccaacacccaagctgagccacatttcgaagagcacttaaccggagga 46692762  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    | ||||||||||||||||||||||||||| | | | |||||||||| |||||||||||||||||||    
T  46692763 taatgcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaacacaaagcccaaaaa 46692828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 5459398 - 5459233
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  ||||||||| | || | |||||| | | | || |||||||||||| ||||||||||| ||||||||||||  ||| ||    
T  5459398 ccatcgtcactactcacccacaaagaacaccatcaaaataaaacttccagaccccaacacccaagctgagccacatttcaaagagcacctaactgaagga 5459299  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    |||||||||||||||||||||||| |||| | | | || ||||||| |||||||||||||||||||    
T  5459298 tcatgcagctatcacaaacctcgcaacctccgaaccactgaaagagcacaacacaaagcccaaaaa 5459233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 195
Target Start/End: Original strand, 31585608 - 31585769
Alignment:
Q  36 gtcactactcacccatgaagaacaccctaaaga-aaaactc-caaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatcat 133  Q
    |||||||||||||||  ||||||||||| || | ||||||| || |  || |||||||||||| |||||||||||||||||||||||| | || ||||||    
T  31585608 gtcactactcacccacaaagaacaccctcaaaataaaactctcagacccccaacacccaagcttagccacatttcgaagagcacctaaccaaaggatcat 31585707  T
Q  134 gcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
     |||||||||||||||||||||||| | | | ||||||| || |||||||||||||||||||    
T  31585708 acagctatcacaaacctcgcgacctccgacccaccgaaatagcacaacacaaagcccaaaaa 31585769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 41920692 - 41920525
Alignment:
Q  33 atcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatg--- 128  Q
    ||||||||||||||||||  || |||||||| || | |||||||||| | || |||||||||||| ||||||||   |||||||||||||  ||| |       
T  41920692 atcgtcactactcacccacaaaaaacaccctcaaaataaaactccaagaccccaacacccaagctgagccacatgatgaagagcacctaactgaaggtta 41920593  T
Q  129 --atcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaa 194  Q
      |||||||||||||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||    
T  41920592 ggatcatgcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacacaaagcccaaaa 41920525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 30685798 - 30685912
Alignment:
Q  80 atcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtaca 179  Q
    |||| |||||||||||| |||||||| || | |||||||||| | || ||||||||||||||||||||||||||||||| | | | |||||||||| |||    
T  30685798 atcccaacacccaagctgagccacatatcaaggagcacctaaccaaaggatcatgcagctatcacaaacctcgcgacctccgaaccaccgaaagagcaca 30685897  T
Q  180 acacaaagcccaaaa 194  Q
    |||||||||||||||    
T  30685898 acacaaagcccaaaa 30685912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 5389266 - 5389430
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    |||||||||||||||||  |  ||||||||||| || | |||||||| | | || |||||||||||| |||||||| ||||||||||| ||| |||| ||    
T  5389266 ccatcgtcactactcacttac-aagaacaccctcaaaataaaactcccagaccccaacacccaagctgagccacatatcgaagagcacttaaccgaagga 5389364  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
     |||| ||||| ||||||||||||||||| | | | |||||||||| |||||||||||||||||||    
T  5389365 ccatgtagctaacacaaacctcgcgacctccgaaccaccgaaagagcacaacacaaagcccaaaaa 5389430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 6764224 - 6764355
Alignment:
Q  30 tccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatg 128  Q
    |||||||||||||||||||||  ||||||| ||| || | |||||||| | | || |  | ||||| | |||||||||||||||||||||||| |||| |    
T  6764224 tccatcgtcactactcacccacaaagaacatcctgaaaataaaactcccagaccccagtatccaagttgagccacatttcgaagagcacctaaccgaagg 6764323  T
Q  129 atcatgcagctatcacaaacctcgcgaccttc 160  Q
    | ||||||||||||||||||||| || |||||    
T  6764324 accatgcagctatcacaaacctcacgcccttc 6764355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 24684390 - 24684493
Alignment:
Q  98 agccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaac 197  Q
    |||||||||||||||||||||| | |||| ||||||||| ||  ||| ||||||||||||| | ||| |||||||||| |||| |||||  || ||||||    
T  24684390 agccacatttcgaagagcacctgaccgaaggatcatgcatcttccac-aacctcgcgacctccgatccaccgaaagagcacaaaacaaaagcccaaaaac 24684488  T
Q  198 caact 202  Q
    |||||    
T  24684489 caact 24684493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 8255264 - 8255099
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  ||||||||||| || | |||||||  | | ||||||||||||||| ||||||||| ||||||||||||||  ||  ||    
T  8255264 ccatcgtcactactcacccacaaagaacaccctcaaaataaaactcacagaccctaacacccaagctgagccacattacgaagagcacctaactgatgga 8255165  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||| ||||||||||||||||||||||||| | ||| |||||||||| |||| ||||||||||||||    
T  8255164 tcaagcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaaaacaaagcccaaaaa 8255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 8268682 - 8268517
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  ||||||||||| || | |||||||  | | ||||||||||||||| ||||||||| ||||||||||||||  ||  ||    
T  8268682 ccatcgtcactactcacccacaaagaacaccctcaaaataaaactcacagaccctaacacccaagctgagccacattacgaagagcacctaactgatgga 8268583  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||| ||||||||||||||||||||||||| | ||| |||||||||| |||| ||||||||||||||    
T  8268582 tcaagcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaaaacaaagcccaaaaa 8268517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 30964609 - 30964513
Alignment:
Q  99 gccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | | ||| |||||| |||||||||| ||||||||    
T  30964609 gccacatttcgaagagcacctaaccgaatgatcatgcagctatcacaaacctcgcgacctccgaaccaccaaaagagcacaacacaaaacccaaaaa 30964513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 30167412 - 30167573
Alignment:
Q  35 cgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatcat 133  Q
    |||||| |||||||||  ||||||||||| || | |||||||| | | || |||||||||| |  ||||||||||||||||| | ||| |||| | ||||    
T  30167412 cgtcaccactcacccacaaagaacaccctcaaaataaaactcccataccccaacacccaagttgggccacatttcgaagagcgcttaaccgaagggtcat 30167511  T
Q  134 gcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    |||||||||| |||||||||||||| |   | |||||||||| |||||||||| ||||||||    
T  30167512 gcagctatcataaacctcgcgacctccggaccaccgaaagagcacaacacaaaccccaaaaa 30167573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 4305951 - 4305797
Alignment:
Q  41 tactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagct 139  Q
    ||||||||||  |||| |||||| || | |||||||| ||| || || ||||||| | ||||||||| |||||||||||| | |||| |||||||||| |    
T  4305951 tactcacccacaaagatcaccctgaaaataaaactcccaaacccaaatacccaagttgagccacatt-cgaagagcacctcaccgaaggatcatgcagtt 4305853  T
Q  140 atcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    ||||||||||| |||||||     | ||| |||||| ||||||||||||| |||||    
T  4305852 atcacaaaccttgcgacctctggaccaccaaaagagcacaacacaaagcctaaaaa 4305797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 5943 - 5777
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||| ||||||||||||||  || |||||||| || | |||||||| | |||| |||||||||||| ||||||||| |||||||||||||| |||| ||    
T  5943 ccatcatcactactcacccacaaaaaacaccctcaaaataaaactcccagatcccaacacccaagctgagccacattacgaagagcacctaaccgaagga 5844  T
Q  130 tcatgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtac-aacacaaagcccaaaaa 195  Q
    ||| | ||||||||||||||| ||||||| | |||||||||||||| || || ||||||||||||||    
T  5843 tcaagtagctatcacaaaccttgcgacctccgatctaccgaaagagcacaaaaacaaagcccaaaaa 5777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 205
Target Start/End: Original strand, 35640 - 35790
Alignment:
Q  53 aagaacaccctaaagaaaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcg 152  Q
    |||||||| ||||| ||||||||| | | || |||||||||||| |||| ||||||||||||||||||| |||  |||||||||||||||||||| ||||    
T  35640 aagaacactctaaa-aaaaactcccacaccccaacacccaagctgagcctcatttcgaagagcacctaaccgatggatcatgcagctatcacaaatctcg 35738  T
Q  153 cgaccttcaatctaccgaaagagtacaacacaaagcccaaaaaaccaacttaa 205  Q
     ||||| | ||| |||||||||| |||||| ||||||| ||||||||||||||    
T  35739 tgacctccgatccaccgaaagagcacaacataaagccc-aaaaaccaacttaa 35790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 3117729 - 3117565
Alignment:
Q  32 catcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatgat 130  Q
    ||||||| ||||| |||||  |||||||||||| | | |||||||| | | || |||||||||| | |||||||||||||||||||| ||| |||| |||    
T  3117729 catcgtctctacttacccacaaagaacaccctataaataaaactcccagaccccaacacccaagttgagccacatttcgaagagcacataatcgaaggat 3117630  T
Q  131 catgcagctatcacaaacctcgcgaccttcaatctaccgaaagagtacaacacaaagcccaaaaa 195  Q
    |||||| ||||||||||||||||||||| | | | ||  |||||| |||||||||||||||||||    
T  3117629 catgcaactatcacaaacctcgcgacctccgaaccacataaagagcacaacacaaagcccaaaaa 3117565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 10542069 - 10541967
Alignment:
Q  31 ccatcgtcactactcacccatgaagaacaccctaaaga-aaaactccaaaatcctaacacccaagctaagccacatttcgaagagcacctaaacgaatga 129  Q
    ||||||||||||||||||||  ||||| |||||  | | |||||| | | | || |||||||||||| |||||||||||||||||||||||| |||| ||    
T  10542069 ccatcgtcactactcacccacaaagaataccctccaaataaaacttccagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaagga 10541970  T
Q  130 tca 132  Q
    |||    
T  10541969 tca 10541967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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