View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0673_low_127 (Length: 210)
Name: NF0673_low_127
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0673_low_127 |
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Alignment Details
Target: chr4 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 53307583 - 53307693
Alignment:
| Q |
2 |
attactactatgttttccattccaagttatggtgatattgatcgtcatgaatatgcctggaagtttaccaatcatgaagagtataatgtgaaatcgccct |
101 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
53307583 |
attactactatgttttccattccaagttatggtgatattgatcgtcatgaatatgcctggaagtttaccaatcatgaagagtataatgtgaaatcgtcct |
53307682 |
T |
|
| Q |
102 |
accatattatt |
112 |
Q |
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||||||||||| |
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| T |
53307683 |
accatattatt |
53307693 |
T |
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