View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0673_low_33 (Length: 351)
Name: NF0673_low_33
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0673_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 48 - 326
Target Start/End: Complemental strand, 15198404 - 15198126
Alignment:
| Q |
48 |
ataataaataatccgcaacaatatgtgacaaacataaccacgtgtgtgtaagacgaacgtggcacttgttgagtttgattgatccttgtttcagatttgg |
147 |
Q |
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| T |
15198404 |
ataataaataatccgcaacaatatgtgacaaacataaccacgtgtgtgtaagacgaacgtggcacttgttcagtttgattgatccttgtttcagatttgg |
15198305 |
T |
|
| Q |
148 |
aacaaacataaaactaacaacaacaactttcatcattcttcttgttccaaacaacatattttgaagatcgaaacagtgatggcaacagggacacaagcat |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
15198304 |
aacaaacataaaactaacaacaacaactttcatcattcttcttgttccaaacaacatattttgaagatcgaaacagtgatggcaacaggtacacaagcat |
15198205 |
T |
|
| Q |
248 |
acggtgaatcatggtactgggacaaccgttacacaaacgaacctggtccttttgattggtaccaaaagtatattacttt |
326 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15198204 |
acggtgaatcatggtactgggacaaccgttacacaaacgaacctggtccttttgattggtaccaaaagtatattacttt |
15198126 |
T |
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