View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0673_low_68 (Length: 292)
Name: NF0673_low_68
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0673_low_68 |
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| [»] scaffold0765 (1 HSPs) |
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| [»] scaffold0239 (1 HSPs) |
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| [»] scaffold0348 (2 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0003 (1 HSPs) |
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| [»] scaffold0114 (1 HSPs) |
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| [»] scaffold0222 (1 HSPs) |
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| [»] scaffold0029 (2 HSPs) |
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| [»] scaffold0020 (2 HSPs) |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold0067 (3 HSPs) |
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| [»] scaffold0235 (2 HSPs) |
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| [»] scaffold0203 (1 HSPs) |
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| [»] scaffold0076 (1 HSPs) |
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| [»] scaffold0072 (1 HSPs) |
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| [»] scaffold1299 (1 HSPs) |
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| [»] scaffold0004 (1 HSPs) |
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| [»] scaffold0405 (1 HSPs) |
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| [»] scaffold0034 (2 HSPs) |
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| [»] scaffold0420 (1 HSPs) |
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| [»] scaffold0523 (1 HSPs) |
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| [»] scaffold0156 (1 HSPs) |
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| [»] scaffold0309 (1 HSPs) |
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| [»] scaffold0053 (2 HSPs) |
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| [»] scaffold0706 (1 HSPs) |
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| [»] scaffold0074 (1 HSPs) |
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| [»] scaffold0443 (1 HSPs) |
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| [»] scaffold0104 (1 HSPs) |
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| [»] scaffold0751 (1 HSPs) |
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| [»] scaffold0139 (1 HSPs) |
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| [»] scaffold0023 (1 HSPs) |
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| [»] scaffold0317 (1 HSPs) |
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| [»] scaffold1914 (1 HSPs) |
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| [»] scaffold0664 (1 HSPs) |
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| [»] scaffold0010 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 65 - 244
Target Start/End: Original strand, 12577096 - 12577275
Alignment:
| Q |
65 |
tcatcagcagtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
164 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12577096 |
tcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
12577195 |
T |
|
| Q |
165 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
12577196 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctca |
12577275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 19716709 - 19716538
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||| | |||||| || ||||||| || || ||||| |
|
|
| T |
19716709 |
agtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttataa |
19716610 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| |||||||||| ||||||||||| ||||| ||| || ||||| ||||| |||||||||||| ||||| |
|
|
| T |
19716609 |
caaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctca |
19716538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 19721272 - 19721101
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||| | |||||| || ||||||| || || ||||| |
|
|
| T |
19721272 |
agtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttataa |
19721173 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| |||||||||| ||||||||||| ||||| ||| || ||||| ||||| |||||||||||| ||||| |
|
|
| T |
19721172 |
caaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctca |
19721101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 23097710 - 23097588
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| || || |||||| ||||| |||||| ||||| |||||||| | ||||||||| ||||| |||| ||||||||| |
|
|
| T |
23097710 |
agtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggctgagtgcactgtgaactgatgtggccctcctcatcacaattataa |
23097611 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgca |
195 |
Q |
| |
|
|| ||||||||||| | |||||| |
|
|
| T |
23097610 |
caaacaacatcacccctcttgca |
23097588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 23274354 - 23274515
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
||||||| |||||| ||||| |||||| |||||||||||||| ||||||||||| | |||||| || ||||| ||||| || |||||||| || | | |
|
|
| T |
23274354 |
ccagtcagagcaaacactttaccaccagtcctaaccttcttcggttgtgtgcactgtgaactgatatggccctcctcattgcagttatagcaaactatgt |
23274453 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| || ||||| ||||| |||| ||| |||||||||||||| ||||| |||||| ||||| |
|
|
| T |
23274454 |
ctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagcacttcttctca |
23274515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 160; Significance: 3e-85; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 65 - 244
Target Start/End: Complemental strand, 18051100 - 18050921
Alignment:
| Q |
65 |
tcatcagcagtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
164 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18051100 |
tcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
18051001 |
T |
|
| Q |
165 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18051000 |
aattataacatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctca |
18050921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 14140789 - 14140919
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| || || |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
14140789 |
agtctgcgtaccagtcaaagcaaataccttcccaccagttctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcgttacaattataa |
14140888 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggcta |
203 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| |
|
|
| T |
14140889 |
catacaacatcaccacgcttgcaatcagcta |
14140919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 14283513 - 14283342
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| ||||| ||||| |||||||||||||||||||| |||||| || ||||| ||||||||||| || || ||||| |
|
|
| T |
14283513 |
agtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtgggcactgtgtgctgatatgaccctcttcgttgcagttataa |
14283414 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| |||||||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
14283413 |
catacaacatcaccacgcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctca |
14283342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 244
Target Start/End: Complemental strand, 12712762 - 12712631
Alignment:
| Q |
113 |
ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgac |
212 |
Q |
| |
|
|||||||||||| | || |||||||||| | |||| |||||||| |||| || ||||||||||||| |||||| || |||||||| |||| || ||||| |
|
|
| T |
12712762 |
ctaaccttcttccgttgagtgcactgagaattgatatgaccctccccattgcagttatagcatacaatatcaccacgtttgcaatcagctaacacgtgac |
12712663 |
T |
|
| Q |
213 |
ccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||||||||||| ||||| |||||| ||||| |
|
|
| T |
12712662 |
ccttctgtccacacctgaagcacttcttctca |
12712631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 11385568 - 11385446
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| || || |||||| ||||| |||||| || || |||||||| | ||||||||| ||||| |||| ||||||||| |
|
|
| T |
11385568 |
agtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggttgagtgcactgtgaactgatgtggccctcctcatcacaattataa |
11385469 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgca |
195 |
Q |
| |
|
|| ||||||||||| | |||||| |
|
|
| T |
11385468 |
caaacaacatcacccctcttgca |
11385446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 231
Target Start/End: Complemental strand, 13965807 - 13965649
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| || || |||||| |||| |||||||||||| | ||||| | |||||| ||||||||| |||| ||||| ||| |
|
|
| T |
13965807 |
agtctgcgtaccagtcaatgcaaacaccttcccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgcaattgtag |
13965708 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaa |
231 |
Q |
| |
|
|| |||| ||| || |||||||| || ||||| |||||||||||| ||||| ||||| |
|
|
| T |
13965707 |
cagacaatatccccacgcttgcattcagctagactgtgacccttctgaccacacctgaa |
13965649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 14144871 - 14144941
Alignment:
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctc |
243 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| || ||||||||| || ||||| ||||| |||||| |||| |
|
|
| T |
14144871 |
catacaacatcaccacgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctc |
14144941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 12798630 - 12798469
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||| |||||||| || ||||| ||| ||||||| |||||||| ||||| | |||||| ||||| ||||||||||| || ||||| ||||||| |
|
|
| T |
12798630 |
ccagtcaacgcaaaaaccttgccacctgtcctagccttcttaggctgtgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacat |
12798531 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| || |||| ||||| |||| ||| || ||||| ||||| ||||| |||||| ||||| |
|
|
| T |
12798530 |
ccccacgctcacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctca |
12798469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 13676571 - 13676732
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
||||||| |||||| ||||| ||||| ||||||||||||||| |||| ||||| | |||||| || ||||| ||||| || |||||||| || | | |
|
|
| T |
13676571 |
ccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaactatgt |
13676670 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| || ||||| ||||| |||| ||| |||||||||||||| ||||| ||||| ||||| |
|
|
| T |
13676671 |
ctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagtacttcttctca |
13676732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 160; Significance: 3e-85; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 65 - 244
Target Start/End: Complemental strand, 53750630 - 53750451
Alignment:
| Q |
65 |
tcatcagcagtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
164 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
53750630 |
tcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattac |
53750531 |
T |
|
| Q |
165 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
53750530 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctca |
53750451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 65 - 244
Target Start/End: Complemental strand, 51603952 - 51603773
Alignment:
| Q |
65 |
tcatcagcagtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
164 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
51603952 |
tcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattac |
51603853 |
T |
|
| Q |
165 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
51603852 |
aattatagcacacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctca |
51603773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 244
Target Start/End: Original strand, 20893151 - 20893322
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| || ||||||||| ||||||||||||||||| || ||||| | |||||| || ||||||||||| || || ||| |
|
|
| T |
20893151 |
agtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctcagtacactgcgaactgatatgcccctcttcattgcagttgtag |
20893250 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| |||| ||| || |||||||| || |||| ||| |||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
20893251 |
tagacaatatccccacgcttgcattcagctaaattgtgtcccttctgaccacacctgaagcacttcctctca |
20893322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 244
Target Start/End: Original strand, 27903505 - 27903676
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| |||||||| | | ||| |||||||| || || |||||||| | ||| |||| ||||| |||||||| ||||| |
|
|
| T |
27903505 |
agtctgcgtaccagtcaaagcaaatacttttcctcaagttctgaccttcttaggttgcgtgcactgtgaactaatgttgccctcctcattacagttataa |
27903604 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| |||| ||| || |||||||| || || | || ||||| ||||| |||||||||||||||||| ||||| |
|
|
| T |
27903605 |
caaacaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaaacacttcttctca |
27903676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 16150766 - 16150927
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||| ||||| ||||| ||||| ||||||||||||||| | |||| || | || || || |||||||||| ||| |||||||| ||||||| |
|
|
| T |
16150766 |
ccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaatatgcccctcttcatcacagttatagcaaacaacat |
16150865 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||| ||||||||||| ||||| ||| || ||||| ||||| ||||| |||||| ||||| |
|
|
| T |
16150866 |
caccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctca |
16150927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 16154912 - 16155073
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||| ||||| ||||| ||||| ||||||||||||||| | |||| || | || || || |||||||||| ||| |||||||| ||||||| |
|
|
| T |
16154912 |
ccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaatatgcccctcttcatcacagttatagcaaacaacat |
16155011 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||| ||||||||||| ||||| ||| || ||||| ||||| ||||| |||||| ||||| |
|
|
| T |
16155012 |
caccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctca |
16155073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 11204374 - 11204226
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||||||||| || || |||||| |||| |||| ||||||| | ||||| | |||||| ||||||||| |||| ||||| ||||| |||| || |
|
|
| T |
11204374 |
ccagtcaaagcaaacaccttcccaccagttctagcctttttcggctcaggacactgtgaactgatatgaccctctccattgcaattgtagcagacaatat |
11204275 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaa |
231 |
Q |
| |
|
| || |||||||| | ||||| |||||||||||| ||||| ||||| |
|
|
| T |
11204274 |
ccccacgcttgcattaagctagactgtgacccttctgaccacacctgaa |
11204226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 160; Significance: 3e-85; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 65 - 244
Target Start/End: Original strand, 13944765 - 13944944
Alignment:
| Q |
65 |
tcatcagcagtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
164 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
13944765 |
tcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattac |
13944864 |
T |
|
| Q |
165 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13944865 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctca |
13944944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 65 - 244
Target Start/End: Complemental strand, 8744778 - 8744599
Alignment:
| Q |
65 |
tcatcagcagtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
164 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
8744778 |
tcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggttgtgtgcactgagtactgatgtggccctcttcattac |
8744679 |
T |
|
| Q |
165 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8744678 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctca |
8744599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 244
Target Start/End: Complemental strand, 16384724 - 16384581
Alignment:
| Q |
101 |
tttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcgg |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
16384724 |
tttccaccagttctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcattacaattatagcatacaacatcaccacgcttgcaatcag |
16384625 |
T |
|
| Q |
201 |
ctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| | || |||||||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
16384624 |
ccaacatgtgacccttctgaccacacctgaagcacttcttctca |
16384581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 16831908 - 16831737
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| || ||||||||| ||||||||||||||||||||||||||| |||||||| || |||||||| || || ||||| |
|
|
| T |
16831908 |
agtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagttataa |
16831809 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||| |||||||| || |||| || |||||||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
16831808 |
catacaacatcaccacgcttgcagtccgctaacacgtgacccttctgaccacacctgaagcacttcttctca |
16831737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 31941662 - 31941823
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||||||||| || || |||||| ||||||||||||||||| || |||| | |||||| || ||||| ||||| |||||||| || ||||||| |
|
|
| T |
31941662 |
ccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactatgaactgatatggccctcctcattgcaattataacaaacaacat |
31941761 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||| |||||||| || ||||| ||| |||||||| ||||| |||||||||||| ||||| |
|
|
| T |
31941762 |
caccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaaacacttcttctca |
31941823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 11949295 - 11949134
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
||||||| |||||| ||||| ||||| | ||||||||||||| || || ||||| |||||||||||| || ||||| || |||||||| ||||||| |
|
|
| T |
11949295 |
ccagtcagagcaaacactttaccaccgatcctaaccttcttcgtctacgtacactgcaaactgatgtgaccttcctcattgcagttatagcaaacaacat |
11949196 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| || ||||| ||||| |||| | ||| || ||||| ||||||||||| |||||| ||||| |
|
|
| T |
11949195 |
ctccccgcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctca |
11949134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 31692555 - 31692394
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
||||||| |||||| || || |||||| ||||||||||||||||| || ||||| | |||||| || ||||| ||||| || ||||| || ||||||| |
|
|
| T |
31692555 |
ccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactgatatggccctcctcattgcagttataacaaacaacat |
31692456 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||| | |||||| || ||||| ||| ||||||| ||||| |||||||||||| ||||| |
|
|
| T |
31692455 |
caccactcttgcagtcagctagagtgtgtcccttctaaccacacctgaaacacttcttctca |
31692394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 195
Target Start/End: Original strand, 17189133 - 17189245
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||| ||||| ||||| ||||| ||||| |||||| ||||| || ||||| | ||||||||| ||||| |||| ||||||||| || ||||||| |
|
|
| T |
17189133 |
ccagtcaacgcaaacactttcccaccggttctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcacaattataacaaacaacat |
17189232 |
T |
|
| Q |
183 |
caccgcgcttgca |
195 |
Q |
| |
|
|||| | |||||| |
|
|
| T |
17189233 |
caccccacttgca |
17189245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 10417425 - 10417254
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| |||||||| ||| ||| |||||||| || || | |||||| | ||| ||||||||||| ||| ||| ||| | |
|
|
| T |
10417425 |
agtctgcgtaccagtcaaagcaaatacttttcctccagttctgaccttcttaggttgcgggcactgcgaactaatgtgaccctcatcaccacagttaaaa |
10417326 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| |||| ||| || ||||||||||| || | || ||||| ||||| || ||||||||||| ||| ||||| |
|
|
| T |
10417325 |
caaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctca |
10417254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 16327089 - 16326918
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| || ||||||||| ||||||||||||||||| || ||||| | |||||| ||||||||| |||| || || ||| |
|
|
| T |
16327089 |
agtctgcgtaccagtcaatgcaaacacctttccaccagttctaaccttcttcggcttagtacactgcgaactgatatgaccctctccattgcagttgtag |
16326990 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| |||| || || ||||| || || |||| ||| |||||||| ||||| |||||||| ||| ||||| |
|
|
| T |
16326989 |
cagacaatgtccccacgcttacattcagctaaattgtgtcccttctgaccacacctgaaacatttcctctca |
16326918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 24190053 - 24190175
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| |||| ||||| ||||| |||||| ||||| || ||||| | ||||||||| ||||| |||| ||||||||| |
|
|
| T |
24190053 |
agtctgcgtaccagtcaacgcaaactctttcccaccggttctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcacaattataa |
24190152 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgca |
195 |
Q |
| |
|
|| ||||||||||| | |||||| |
|
|
| T |
24190153 |
caaacaacatcaccccacttgca |
24190175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 12357897 - 12357736
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
||||||| |||||| ||||| ||||| |||||||||||||| ||||| ||||| | |||||| ||||| || ||||| || |||||||| ||||| | |
|
|
| T |
12357897 |
ccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaacaacgt |
12357798 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| || ||||| ||||| |||| ||| || ||||| ||||| ||||| |||||| ||||| |
|
|
| T |
12357797 |
ctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctca |
12357736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 13317873 - 13317778
Alignment:
| Q |
149 |
tgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||| ||||||||||| ||||| || || ||||| || ||||||||||| |||| | ||||| || || |||||||||||||||||| ||||| |
|
|
| T |
13317873 |
tgaccttcttcattacagttataacaaaccacatccccacgcttgcaatccgctaaaacatgacctttttgaccacatctgaaacacttcttctca |
13317778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 65 - 244
Target Start/End: Complemental strand, 17266676 - 17266497
Alignment:
| Q |
65 |
tcatcagcagtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
164 |
Q |
| |
|
|||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17266676 |
tcattagcagtctaggtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattac |
17266577 |
T |
|
| Q |
165 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| ||||| |
|
|
| T |
17266576 |
aattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctca |
17266497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 25851106 - 25851271
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| || || |||||| |||| |||||||||||| | ||||| | ||| || ||||||||| |||| || || ||| |
|
|
| T |
25851106 |
agtctgcgtaccagtcaaagcaaataccttcccaccagttctagccttcttcggctcaggacactgtgaactaatatgaccctctccattgcagttgtag |
25851205 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttc |
238 |
Q |
| |
|
|| |||| || || |||||| | || ||||| |||||||||||| ||||| ||||| |||||| |
|
|
| T |
25851206 |
cagacaatgtctccacgcttgtattcagctagactgtgacccttctgaccacacctgaagcacttc |
25851271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0765 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0765
Description:
Target: scaffold0765; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 6412 - 6241
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
||||||||| |||||||||||||| || ||||||||| ||||||||||||| | ||||||||||||||||||||||| |||| ||| |||||||||||| |
|
|
| T |
6412 |
agtctgtgtaccagtcaaagcaaatacctttccaccagttctaaccttcttctgttgtgtgcactgagtactgatgtggccctattcgttacaattatag |
6313 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||||| ||| || ||||| ||||| ||||||| |||||||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
6312 |
catacaatatcgccacgcttacaatcagctagcacgtgacccttctgaccacacctgaagcacttcttctca |
6241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 73 - 244
Target Start/End: Original strand, 22054049 - 22054220
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||||||| || |||||||| || || ||||| |
|
|
| T |
22054049 |
agtctgcgtaccagtcaaagcaaacacttttccaccagttctatccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagttataa |
22054148 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| |||||||||||||| ||||||||||| |||||| ||||| |
|
|
| T |
22054149 |
catacaacatcaccacgcttgcaatccgctaaaaggtgacccttctgaccacatctgaagcacttcttctca |
22054220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 22027875 - 22027704
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || || ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||| | |||||| |
|
|
| T |
22027875 |
agtctgcgtaccggtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgtagttatag |
22027776 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| ||||| || || | ||| ||||| |||| |||||||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
22027775 |
caaacaacgtctcccctcttacaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctca |
22027704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 16268819 - 16268648
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| |||||||||||| |||| |||||||||||| | ||||| | |||||| ||||||||| |||| ||||| ||| |
|
|
| T |
16268819 |
agtctgcgtaccagtcaaagcaaacacttttccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgcaattgtag |
16268720 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| |||| ||| || |||||||| || ||||| ||||||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
16268719 |
cagacaatatccccacgcttgcattcagctaggctatgacccttctgaccacacctgaagcacttcctctca |
16268648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 21928693 - 21928785
Alignment:
| Q |
152 |
ccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||| |||||||||||| || |||||||| ||||||||||| | | ||| || |||||||||||||||||||||||| ||||| |
|
|
| T |
21928693 |
ccctcttcatcacaattatagcaaacgacatcaccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaaacacttcttctca |
21928785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 22374131 - 22374185
Alignment:
| Q |
149 |
tgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggcta |
203 |
Q |
| |
|
||||| ||||||| |||||||||||| |||| |||||| ||||||||||| |||| |
|
|
| T |
22374131 |
tgaccttcttcatcacaattatagcaaacaatatcaccacgcttgcaatcagcta |
22374185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0239 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0239
Description:
Target: scaffold0239; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 64 - 244
Target Start/End: Complemental strand, 9951 - 9771
Alignment:
| Q |
64 |
atcatcagcagtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcatta |
163 |
Q |
| |
|
||||| || |||||| || |||||||||||||| |||||||||||| |||||||||||||||| |||||||||| |||||||| || | |||||| || |
|
|
| T |
9951 |
atcattagtagtctgcgtaccagtcaaagcaaacacttttccaccagttctaaccttcttcggcagtgtgcactgtgtactgatatggcactcttcgttg |
9852 |
T |
|
| Q |
164 |
caattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| ||||| |||||||||||||| ||||||||||| |||| ||||||||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
9851 |
cagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgacccttctaaccacacctgaagcacttcttctca |
9771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0348 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0348
Description:
Target: scaffold0348; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 244
Target Start/End: Complemental strand, 4992 - 4833
Alignment:
| Q |
85 |
agtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatca |
184 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||||| || ||||| || || || ||||| |||||||||||| |
|
|
| T |
4992 |
agtcaaagcaaacacttttccaccggttctaaccttcctcggctgtgtacactgagtactgatatggccctcctcgttgcagttataacatacaacatca |
4893 |
T |
|
| Q |
185 |
ccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| ||||||||||| |||| || |||||||||||||||||| ||||| |||||| ||||| |
|
|
| T |
4892 |
ccacgcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctca |
4833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0348; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 17639 - 17509
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| | ||| |||||| ||||||||||||||||||||| |||||||||||||| || |||||||| || ||||| || |
|
|
| T |
17639 |
agtctgcgtaccagtcaaagcaaacattttcccaccagttctaaccttcttcggctgtgtacactgagtactgatatggccctcttcgttgcaattgtaa |
17540 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggcta |
203 |
Q |
| |
|
|||||||||||||| ||| || |||| |||| |
|
|
| T |
17539 |
catacaacatcaccacgcatgtaatccgcta |
17509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 244
Target Start/End: Original strand, 263375 - 263546
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| |||||||||| | |||||||||||||| |||||||||||| |||||||| || |||||||| ||||| ||||| |
|
|
| T |
263375 |
agtctgcgtaccagtcaaagcaaacacttttccactagttctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttacagttataa |
263474 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||| ||||||||| |||| |||||||||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
263475 |
catacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctca |
263546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 244
Target Start/End: Original strand, 203530 - 203701
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| |||||||||| | |||||||||||||| |||||||||||| |||||||| || |||||||| ||||| ||||| |
|
|
| T |
203530 |
agtctgcgtaccagtcaaagcaaacacttttccactagttctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttacagttataa |
203629 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||||||| ||||||||| |||| |||||||||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
203630 |
catacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctca |
203701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0114 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0114
Description:
Target: scaffold0114; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 40207 - 40372
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
|
|
| T |
40207 |
agtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcgttgcagttataa |
40306 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttc |
238 |
Q |
| |
|
||||||||||||| ||||||||||| |||| || ||||||||||| ||||| ||||| |||||| |
|
|
| T |
40307 |
catacaacatcacaacgcttgcaatccgctaacatgtgacccttctaaccacacctgaagcacttc |
40372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 642 - 471
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
||||||||| |||||||| ||||| ||||| ||| | ||||||||||||||||||||||||||| | |||||| || ||||||||||| || |||||| |
|
|
| T |
642 |
agtctgtgtaccagtcaatgcaaacactttcccatcggttctaaccttcttcggctgtgtgcactgtgaactgatatggccctcttcattgcagttatag |
543 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| ||||||||||| ||||||||||| ||||| ||| || ||||| ||||| |||||||||||| ||||| |
|
|
| T |
542 |
caaacaacatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctca |
471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 115751 - 115882
Alignment:
| Q |
113 |
ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgac |
212 |
Q |
| |
|
|||||||||||||| || |||||||||| |||||| |||||||| |||| |||||||||||||| | |||||| ||||||||||| |||| || ||||| |
|
|
| T |
115751 |
ctaaccttcttcggttgagtgcactgagaactgatatgaccctccccattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgac |
115850 |
T |
|
| Q |
213 |
ccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||||||||||| ||||| |||||| ||||| |
|
|
| T |
115851 |
ccttctgtccacacctgaagcacttcttctca |
115882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 94049 - 93878
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| |||||||| ||| || |||||||| || || |||||||| | ||| ||||||||||| ||| ||| ||| | |
|
|
| T |
94049 |
agtctgcgtaccagtcaaagcaaatacttttcctccagtcctgaccttcttaggttgagtgcactgcgaactaatgtgaccctcatcaccacagttaaaa |
93950 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| |||| ||| || ||||||||||| || | || ||||| ||||| || ||||||||||| ||| ||||| |
|
|
| T |
93949 |
caaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctca |
93878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 244
Target Start/End: Complemental strand, 98734 - 98567
Alignment:
| Q |
77 |
tgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcata |
176 |
Q |
| |
|
||||| ||||||| |||||| || || |||||| |||||||||||||||||||||||||| | |||||| || |||||||| || || ||||| |||| |
|
|
| T |
98734 |
tgtgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgtgtgcactgcgaactgatatggccctcttcgttgcagttataacata |
98635 |
T |
|
| Q |
177 |
caacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||| || ||||| ||||| |||||||||||| ||||| |
|
|
| T |
98634 |
caacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctca |
98567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 176212 - 176307
Alignment:
| Q |
149 |
tgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||||||||| ||||||||||| |||| ||| || |||| |||||| || ||||||||| ||||| |
|
|
| T |
176212 |
tgaccttcttcatcacaattatagcaaacaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctca |
176307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 22310 - 22396
Alignment:
| Q |
112 |
tctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatc |
198 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| || ||||||||||| || |||||||| ||||||||||| ||||||||||| |
|
|
| T |
22310 |
tctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatc |
22396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 49335 - 49164
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||| ||||||||| ||||| | |||| ||||||||||||||| ||||||||||| | ||| || || |||||||||| |||||||||| |
|
|
| T |
49335 |
agtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatag |
49236 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| || |||||||| |||||||||| ||||| ||| || ||||| ||||| |||||||| ||| ||||| |
|
|
| T |
49235 |
caaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctca |
49164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 58369 - 58198
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||| ||||||||| ||||| | |||| ||||||||||||||| ||||||||||| | ||| || || |||||||||| |||||||||| |
|
|
| T |
58369 |
agtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatag |
58270 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| || |||||||| |||||||||| ||||| ||| || ||||| ||||| |||||||| ||| ||||| |
|
|
| T |
58269 |
caaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctca |
58198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 64757 - 64586
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||| ||||||||| ||||| | |||| ||||||||||||||| ||||||||||| | ||| || || |||||||||| |||||||||| |
|
|
| T |
64757 |
agtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatag |
64658 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| || |||||||| |||||||||| ||||| ||| || ||||| ||||| |||||||| ||| ||||| |
|
|
| T |
64657 |
caaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctca |
64586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 244
Target Start/End: Complemental strand, 34642843 - 34642712
Alignment:
| Q |
113 |
ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgac |
212 |
Q |
| |
|
|||||||||||||| || |||||||||| |||||| |||||||| |||| || || |||||||||| |||||| || || ||||| |||| || ||||| |
|
|
| T |
34642843 |
ctaaccttcttcggttgagtgcactgagaactgatatgaccctccccattgcagttgtagcatacaatatcaccacgtttacaatcagctaacacgtgac |
34642744 |
T |
|
| Q |
213 |
ccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||||||||||| ||||| |||||| ||||| |
|
|
| T |
34642743 |
ccttctgtccacacctgaagcacttcttctca |
34642712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 14377213 - 14377089
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| ||||||||||| ||||||||||||||||||||| || || | ||||||||| ||||||||||| || ||||| |
|
|
| T |
14377213 |
agtctgcgtaccagtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtacattgcgaactgatgtggccctcttcattgcagttataa |
14377114 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaat |
197 |
Q |
| |
|
|| ||||||||||| ||||| |||| |
|
|
| T |
14377113 |
caaacaacatcaccacgcttacaat |
14377089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 19438026 - 19438150
Alignment:
| Q |
113 |
ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgac |
212 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||| || | |||||| || || ||||| |||||||||||||| ||||||||||| ||||| ||| | |
|
|
| T |
19438026 |
ctaaccttcttcggctgtgtgcactgcgaactgatatggcgctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtc |
19438125 |
T |
|
| Q |
213 |
ccttctgtccacatctgaaacactt |
237 |
Q |
| |
|
| ||||| ||||| ||||||||||| |
|
|
| T |
19438126 |
ctttctgaccacacctgaaacactt |
19438150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 21567288 - 21567166
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||||| ||||| |||||| ||||| |||||||| | ||||||||| ||||| | || ||||||||| |
|
|
| T |
21567288 |
agtctgcgtaccagtcaaagcaaacacttttccaccggttctaatcttctttggctgagtgcactgggaactgatgtggccctccttatcacaattataa |
21567189 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgca |
195 |
Q |
| |
|
|| ||||||||||| | |||||| |
|
|
| T |
21567188 |
caaacaacatcacccctcttgca |
21567166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 18797674 - 18797835
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| ||||| ||||| |||||||||||| || || |||||||| | |||||| || || || ||||| || |||||| |
|
|
| T |
18797674 |
agtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttctttggttgagtgcactgtgaactgatatggccttcatcattgcagttatag |
18797773 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaaca |
234 |
Q |
| |
|
|| ||||| ||||| ||||||||||| ||||| ||| |||||||| ||||| |||||||| |
|
|
| T |
18797774 |
caaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaaca |
18797835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 21474643 - 21474706
Alignment:
| Q |
132 |
tgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgca |
195 |
Q |
| |
|
||||||||| ||| || ||||||||||||| |||||| ||||| |||| |||||| |||||||| |
|
|
| T |
21474643 |
tgcactgagaactaatatgaccctcttcatcacaattgtagcacacaatatcaccacgcttgca |
21474706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0235 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0235
Description:
Target: scaffold0235; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 8617 - 8446
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| ||||| ||||| ||||||||||||||| || ||||||| | |||||| || |||| |||||| || ||||| |
|
|
| T |
8617 |
agtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataa |
8518 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| ||||| ||||| ||||||||||| ||||| ||| |||||||| ||||| |||||||||||| ||||| |
|
|
| T |
8517 |
caaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctca |
8446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0235; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 18831 - 18660
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| ||||| ||||| ||||||||||||||| || ||||||| | |||||| || |||| |||||| || ||||| |
|
|
| T |
18831 |
agtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataa |
18732 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| ||||| ||||| ||||||||||| ||||| ||| |||||||| ||||| |||||||||||| ||||| |
|
|
| T |
18731 |
caaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctca |
18660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0203 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0203
Description:
Target: scaffold0203; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 999 - 838
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||||||||| |||| || || ||||| | |||||| |||||||||||||| || ||||| || |||| || |
|
|
| T |
999 |
ccagtcaaagcaaacactttaccaccggttctaaccttcctcggttgcgtacactgtgaactgatatgaccctcttcattgcagttataacaaacaatat |
900 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||| ||||||||||| ||||| ||| || ||||| ||||| ||||| |||||| ||||| |
|
|
| T |
899 |
caccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctca |
838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 53578 - 53453
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||| || | |||||| || |||||||||||||| ||||| |
|
|
| T |
53578 |
agtctgcgtaccagtcaatgcaaatactttcccaccggttctaaccttcttcggctatgtgcattgtgaactgatatggccctcttcattacagttataa |
53479 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatc |
198 |
Q |
| |
|
||||| || ||||| ||||||||||| |
|
|
| T |
53478 |
cataccacgtcaccacgcttgcaatc |
53453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 54236 - 54367
Alignment:
| Q |
113 |
ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgac |
212 |
Q |
| |
|
|||||||| ||||| ||||||||| | | ||||| |||||||||||||| || ||||| || ||||||||||| |||||||||| ||||| ||| | |
|
|
| T |
54236 |
ctaacctttttcggttgtgtgcaccgtgagctgatatgaccctcttcattgcagttataacaaacaacatcaccacgcttgcaataagctagagtgtgtc |
54335 |
T |
|
| Q |
213 |
ccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||||| ||||| |||||||||||| ||||| |
|
|
| T |
54336 |
ccttctgaccacacctgaaacacttcttctca |
54367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1299 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1299
Description:
Target: scaffold1299; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 2006 - 1881
Alignment:
| Q |
70 |
agcagtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaatta |
169 |
Q |
| |
|
||||||||| || | |||||||||||| ||||| ||||| ||||| |||||| ||||| |||||||| | ||||||||| ||||| |||| ||||||| |
|
|
| T |
2006 |
agcagtctgcgtactagtcaaagcaaacactttcccaccggttctaatcttctttggctgagtgcactgggaactgatgtggccctcctcatcacaatta |
1907 |
T |
|
| Q |
170 |
tagcatacaacatcaccgcgcttgca |
195 |
Q |
| |
|
|| || ||||||||||| | |||||| |
|
|
| T |
1906 |
taacaaacaacatcacccctcttgca |
1881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 244
Target Start/End: Original strand, 21961193 - 21961364
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||||||||| || ||||||||| ||||||||||||||||| | |||||| | |||||| ||||||||| |||| || || ||| |
|
|
| T |
21961193 |
agtctgcgtaccagtcaaagcaaatacctttccaccagttctaaccttcttcggctcagggcactgcgaactgatatgaccctctccattgcagttgtag |
21961292 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| |||| ||| || ||||| || || |||| ||| |||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
21961293 |
cagacaatatccccacgcttacattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctca |
21961364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 244
Target Start/End: Complemental strand, 20833084 - 20832953
Alignment:
| Q |
113 |
ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgac |
212 |
Q |
| |
|
||||||||| |||| || || ||||| | |||||||||||| || ||||| || ||||| || |||||||| || | ||||||||| ||||| ||| | |
|
|
| T |
20833084 |
ctaaccttcctcggttgcgtacactgcgaactgatgtgaccttcctcattgcagttataacaaacaacatctcccctcttgcaatcagctagtgtgtgtc |
20832985 |
T |
|
| Q |
213 |
ccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| ||||| ||||| |||||||| ||| ||||| |
|
|
| T |
20832984 |
ctttctgaccacacctgaaacaattcttctca |
20832953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 325866 - 325980
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||||||||||| || ||||||||||| | |||||| || ||||||||||| || ||||| || ||||||| |
|
|
| T |
325866 |
ccagtcaaagcaaacactttaccaccggttctaaccttctttggttgtgtgcactgtgaactgatatggccctcttcattgcagttataacaaacaacat |
325965 |
T |
|
| Q |
183 |
caccgcgcttgcaat |
197 |
Q |
| |
|
| || ||||| |||| |
|
|
| T |
325966 |
ctccccgcttacaat |
325980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0405 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0405
Description:
Target: scaffold0405; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 5824 - 5916
Alignment:
| Q |
146 |
atgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttc |
238 |
Q |
| |
|
||||| |||||||||| ||||||||| || |||||||| || ||||||||||| |||| ||| || |||||||||||||||||||||||| |
|
|
| T |
5824 |
atgtgtccctcttcatcacaattataacaaacaacatccccacgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttc |
5916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 244
Target Start/End: Original strand, 70521 - 70692
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || ||||||||| |||| |||||||| ||| ||| |||||||| || || |||||||| | ||| ||||| ||||| |||||||| ||||| |
|
|
| T |
70521 |
agtctgcgtaccagtcaaaacaaatacttttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcctcattacagttataa |
70620 |
T |
|
| Q |
173 |
catacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| |||| ||| || |||||||| || || | || ||||| || || || ||||||||||||||| ||||| |
|
|
| T |
70621 |
caaacaatatctccacgcttgcattcagccaacacatgacctttatgaccgcatctgaaacacttcttctca |
70692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 2097 - 1936
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
||||||| |||||| ||||| ||||| |||||||||||||| ||||| ||||| | |||||| ||||| || ||||| || |||||||| ||||| | |
|
|
| T |
2097 |
ccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaacaacgt |
1998 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| || ||||| ||||| |||| ||| || ||||| ||||| ||||| |||||| ||||| |
|
|
| T |
1997 |
ctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctca |
1936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0420 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0420
Description:
Target: scaffold0420; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 8773 - 8934
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||| ||||| ||||| ||||| |||||||||||||| || |||||||| | |||||| || || ||||| || || || ||||| |||| | |
|
|
| T |
8773 |
ccagtcaatgcaaacactttcccaccggtactaaccttcttcggttgagtgcactgcgaactgatatggccttcttcgttgcagttgtagcaaacaatgt |
8872 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||| ||||||||||| ||||| ||| || ||||| ||||| |||||||||||| ||||| |
|
|
| T |
8873 |
caccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctca |
8934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0523 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0523
Description:
Target: scaffold0523; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 5599 - 5719
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||| ||||| ||||| ||||| ||||||||||| || || || ||||| | |||||| ||||| |||||||||||||| ||||| ||||||| |
|
|
| T |
5599 |
ccagtcaacgcaaacactttgccacctgtcctaaccttcttaggttgcgtacactgcgaactgatatgaccttcttcattacaattgtagcaaacaacat |
5698 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggcta |
203 |
Q |
| |
|
| || ||||| ||||| |||| |
|
|
| T |
5699 |
ccccacgcttacaatcagcta |
5719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0156 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0156
Description:
Target: scaffold0156; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 37128 - 37259
Alignment:
| Q |
113 |
ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgac |
212 |
Q |
| |
|
||||||||||||||||| || ||||| | |||||| ||||| || ||||| || |||||||| |||| ||| || | ||| ||||| ||||| ||| | |
|
|
| T |
37128 |
ctaaccttcttcggctgcgtacactgtgaactgatatgaccttcctcattgcagttatagcaaacaatatccccacacttacaatcagctagtgtgtgtc |
37227 |
T |
|
| Q |
213 |
ccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
37228 |
ccttctgaccacacctgaagcacttcttctca |
37259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0309 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0309
Description:
Target: scaffold0309; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 12916 - 13006
Alignment:
| Q |
113 |
ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggcta |
203 |
Q |
| |
|
||||||||||| ||||| || ||||| | |||||| ||||| ||||||||||| || ||||| |||||||| || ||||| ||||| |||| |
|
|
| T |
12916 |
ctaaccttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagcta |
13006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 65453 - 65343
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag |
172 |
Q |
| |
|
|||||| || |||||||| ||| | ||||||||||| ||||||||||| ||||| |||||||| | ||||||||| || || |||| ||||||||| |
|
|
| T |
65453 |
agtctgcgtaccagtcaatgcatacacttttccaccggtcctaaccttctttggctgggtgcactgtgaactgatgtggccttcctcatcacaattataa |
65354 |
T |
|
| Q |
173 |
catacaacatc |
183 |
Q |
| |
|
|| |||||||| |
|
|
| T |
65353 |
caaacaacatc |
65343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 62917 - 62797
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||| ||||| ||||| || ||||| | |||||| ||||| | ||||||||| || ||| | ||||||| |
|
|
| T |
62917 |
ccagtcaaagcaaacactttgccacctgtcctaactttcttaggctgcgtacactgcgaactgatatgaccttattcattacagttgtagaaaacaacat |
62818 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggcta |
203 |
Q |
| |
|
| || ||||| ||||| |||| |
|
|
| T |
62817 |
ccccacgcttacaatcagcta |
62797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0706 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0706
Description:
Target: scaffold0706; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 5354 - 5193
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
||||||| |||||| ||||| ||||| ||||||||||||||| | ||| |||| | |||||| || ||||| ||||| || |||||||| ||||||| |
|
|
| T |
5354 |
ccagtcagagcaaacactttaccaccggttctaaccttcttcggttatgtacactatgaactgatatggccctcctcattgcagttatagcaaacaacat |
5255 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| | ||||| ||||| |||| ||| |||||||| ||||| ||||| |||||| ||||| |
|
|
| T |
5254 |
ctctccgcttacaatcagctaaagtgtgtcccttctgaccacacctgaagcacttcttctca |
5193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 15279 - 15352
Alignment:
| Q |
131 |
gtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctag |
204 |
Q |
| |
|
|||||||| | |||||| || ||||||||||| || ||||| || ||||||||||| ||||||||||| ||||| |
|
|
| T |
15279 |
gtgcactgtgaactgatatggccctcttcattgcagttataacaaacaacatcaccacgcttgcaatcagctag |
15352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0443 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0443
Description:
Target: scaffold0443; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 11958 - 12013
Alignment:
| Q |
73 |
agtctgtgtgccagtcaaagcaaaaacttttccaccaactctaaccttcttcggct |
128 |
Q |
| |
|
||||||||| |||||||||||||| || |||||||||| |||| ||||||||||| |
|
|
| T |
11958 |
agtctgtgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggct |
12013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0104 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0104
Description:
Target: scaffold0104; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 43498 - 43403
Alignment:
| Q |
149 |
tgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||| || ||||| ||||| |||| ||| || ||||||||||| || || |||||| ||||| |
|
|
| T |
43498 |
tgaccctcttcatcacaattatagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctca |
43403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0751 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0751
Description:
Target: scaffold0751; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 5375 - 5501
Alignment:
| Q |
118 |
cttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttc |
217 |
Q |
| |
|
|||||| ||||| || ||||| | |||||| ||||| ||||||||||| || ||||| |||||||| || ||||| ||||| |||| ||| || ||| |
|
|
| T |
5375 |
cttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttc |
5474 |
T |
|
| Q |
218 |
tgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|| ||||| ||||| |||||| ||||| |
|
|
| T |
5475 |
tgaccacacctgaagcacttcttctca |
5501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0139
Description:
Target: scaffold0139; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 19114 - 19016
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaaca |
181 |
Q |
| |
|
||||||| |||||| ||||| ||||| |||||||||||||| ||||| ||||| | |||||| ||||| || ||||| || |||||||||| |||| |
|
|
| T |
19114 |
ccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcatataaca |
19016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 164543 - 164385
Alignment:
| Q |
86 |
gtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcac |
185 |
Q |
| |
|
||||| ||||| ||||| ||||| |||||||||||||||||| || | || | |||||| || || |||||||| || ||||| || ||||||| || |
|
|
| T |
164543 |
gtcaatgcaaacactttcccaccggttctaaccttcttcggctgagtataatgcgaactgatatggccttcttcattgcagttataacaaacaacattac |
164444 |
T |
|
| Q |
186 |
cgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| ||||||||||| ||| ||| || ||||| ||||| |||||||||||| ||||| |
|
|
| T |
164443 |
cacgcttgcaatcaactaaagtgtgtcctttctgaccacacctgaaacacttcttctca |
164385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0317 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0317
Description:
Target: scaffold0317; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 2790 - 2951
Alignment:
| Q |
83 |
ccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacat |
182 |
Q |
| |
|
||||||| |||||| ||||| ||||| ||||||||||||||| |||| ||||| | |||||| || ||||| ||||| || |||||||| || | | |
|
|
| T |
2790 |
ccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaactatgt |
2889 |
T |
|
| Q |
183 |
caccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
| || ||||| ||||| |||| ||| |||||||||||||| ||||| ||||| ||||| |
|
|
| T |
2890 |
ctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagaacttcttctca |
2951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1914 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1914
Description:
Target: scaffold1914; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 1246 - 1214
Alignment:
| Q |
212 |
cccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
1246 |
cccttctgtccacatctgaaacacttcttctca |
1214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0664 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0664
Description:
Target: scaffold0664; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 7266 - 7358
Alignment:
| Q |
152 |
ccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgacccttctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||||||||| | | ||||| || ||||||||||| ||||||||||| ||||| ||| || ||||| ||||| ||||| |||||| ||||| |
|
|
| T |
7266 |
ccctcttcatcatagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctca |
7358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 180951 - 180823
Alignment:
| Q |
116 |
accttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcaggtgaccct |
215 |
Q |
| |
|
|||||||| || || |||||||| | ||| ||||||||||| ||| ||| ||| | || |||| ||| || ||||||||||| || | || ||||||| |
|
|
| T |
180951 |
accttcttaggttgagtgcactgcgaactaatgtgaccctcatcaccacagttaaaacaaacaatatctccacgcttgcaatcagccaacacatgaccct |
180852 |
T |
|
| Q |
216 |
tctgtccacatctgaaacacttcatctca |
244 |
Q |
| |
|
|||| || ||||||||||| ||| ||||| |
|
|
| T |
180851 |
tctgaccgcatctgaaacatttcttctca |
180823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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