View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0673_low_82 (Length: 270)

Name: NF0673_low_82
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0673_low_82
NF0673_low_82
[»] scaffold0044 (2 HSPs)
scaffold0044 (150-193)||(81808-81851)
scaffold0044 (150-193)||(65560-65603)
[»] chr2 (20 HSPs)
chr2 (152-193)||(26903355-26903396)
chr2 (149-193)||(42249477-42249521)
chr2 (147-188)||(20917517-20917558)
chr2 (150-193)||(24285696-24285739)
chr2 (150-193)||(24292372-24292415)
chr2 (150-193)||(34070626-34070669)
chr2 (147-189)||(15953098-15953140)
chr2 (149-189)||(14582924-14582964)
chr2 (150-189)||(15944583-15944622)
chr2 (150-189)||(17687424-17687463)
chr2 (150-189)||(20621518-20621557)
chr2 (149-184)||(25483600-25483635)
chr2 (149-184)||(25491206-25491241)
chr2 (150-189)||(35138593-35138632)
chr2 (150-189)||(35146929-35146968)
chr2 (150-189)||(41233870-41233909)
chr2 (150-183)||(20372345-20372378)
chr2 (149-189)||(38168383-38168423)
chr2 (149-189)||(44372704-44372744)
chr2 (149-189)||(44388615-44388655)
[»] chr3 (14 HSPs)
chr3 (149-193)||(30498-30542)
chr3 (150-193)||(8197718-8197761)
chr3 (150-189)||(2211239-2211278)
chr3 (150-188)||(17919199-17919237)
chr3 (150-189)||(16816230-16816268)
chr3 (150-189)||(17628265-17628304)
chr3 (150-189)||(17933655-17933694)
chr3 (154-193)||(18349560-18349599)
chr3 (150-189)||(50824352-50824391)
chr3 (150-189)||(50851469-50851508)
chr3 (150-184)||(14538636-14538670)
chr3 (150-184)||(27341366-27341400)
chr3 (150-183)||(28470249-28470282)
chr3 (149-189)||(18039010-18039050)
[»] scaffold0991 (1 HSPs)
scaffold0991 (150-193)||(395-438)
[»] chr8 (9 HSPs)
chr8 (150-193)||(4582204-4582247)
chr8 (148-189)||(25579838-25579879)
chr8 (148-189)||(30938280-30938321)
chr8 (149-189)||(17973564-17973604)
chr8 (149-189)||(26876080-26876120)
chr8 (150-189)||(26873630-26873669)
chr8 (149-183)||(17683828-17683862)
chr8 (150-183)||(17664672-17664705)
chr8 (149-189)||(1407099-1407139)
[»] chr1 (8 HSPs)
chr1 (150-193)||(21498920-21498963)
chr1 (149-189)||(35104090-35104130)
chr1 (150-189)||(29221514-29221553)
chr1 (150-189)||(31539954-31539993)
chr1 (150-189)||(31548523-31548562)
chr1 (150-193)||(52100017-52100060)
chr1 (149-187)||(20314055-20314093)
chr1 (148-189)||(44320218-44320259)
[»] scaffold0083 (1 HSPs)
scaffold0083 (148-189)||(15811-15852)
[»] scaffold0015 (1 HSPs)
scaffold0015 (150-190)||(192528-192568)
[»] chr4 (8 HSPs)
chr4 (149-189)||(10638327-10638367)
chr4 (149-189)||(27343717-27343757)
chr4 (148-185)||(12428508-12428545)
chr4 (149-189)||(8103114-8103154)
chr4 (150-189)||(8094308-8094347)
chr4 (150-189)||(12996476-12996515)
chr4 (150-189)||(52295604-52295643)
chr4 (149-183)||(21532336-21532370)
[»] scaffold0863 (1 HSPs)
scaffold0863 (150-193)||(394-437)
[»] scaffold0389 (1 HSPs)
scaffold0389 (150-193)||(416-459)
[»] scaffold0170 (1 HSPs)
scaffold0170 (150-189)||(7216-7255)
[»] chr6 (12 HSPs)
chr6 (150-188)||(13490193-13490231)
chr6 (28-69)||(17725778-17725819)
chr6 (149-189)||(23925334-23925374)
chr6 (149-189)||(30824555-30824595)
chr6 (150-189)||(5004061-5004100)
chr6 (150-189)||(5489145-5489184)
chr6 (150-189)||(5994699-5994738)
chr6 (150-189)||(11053702-11053741)
chr6 (150-189)||(25550295-25550334)
chr6 (150-189)||(35091702-35091741)
chr6 (149-189)||(11279836-11279876)
chr6 (149-189)||(25506567-25506607)
[»] scaffold0497 (1 HSPs)
scaffold0497 (148-189)||(10991-11032)
[»] scaffold0431 (1 HSPs)
scaffold0431 (148-185)||(137-174)
[»] scaffold0027 (1 HSPs)
scaffold0027 (150-183)||(65710-65743)
[»] scaffold0111 (1 HSPs)
scaffold0111 (149-189)||(33034-33074)
[»] scaffold0002 (1 HSPs)
scaffold0002 (149-189)||(121227-121267)
[»] chr7 (8 HSPs)
chr7 (149-189)||(12978454-12978494)
chr7 (150-189)||(4941603-4941642)
chr7 (150-189)||(13831500-13831539)
chr7 (150-189)||(18304418-18304457)
chr7 (149-188)||(30244774-30244813)
chr7 (149-188)||(30245567-30245606)
chr7 (149-188)||(30255412-30255450)
chr7 (150-184)||(10439937-10439971)
[»] chr5 (9 HSPs)
chr5 (149-189)||(31421788-31421828)
chr5 (153-193)||(41099798-41099838)
chr5 (149-184)||(19223554-19223589)
chr5 (150-189)||(20372939-20372978)
chr5 (150-189)||(20398661-20398700)
chr5 (150-189)||(23350102-23350141)
chr5 (150-189)||(24956872-24956911)
chr5 (150-189)||(24965335-24965374)
chr5 (149-183)||(29186310-29186344)
[»] scaffold0156 (1 HSPs)
scaffold0156 (150-189)||(35382-35421)
[»] scaffold0048 (1 HSPs)
scaffold0048 (150-189)||(7655-7694)
[»] scaffold0039 (1 HSPs)
scaffold0039 (149-184)||(40864-40899)
[»] scaffold0016 (1 HSPs)
scaffold0016 (150-189)||(23464-23503)
[»] scaffold0209 (1 HSPs)
scaffold0209 (148-189)||(110-151)


Alignment Details
Target: scaffold0044 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 81851 - 81808
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  81851 tgtcataccctaaattttgaccacttttctctatttttacacat 81808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 65603 - 65560
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||||||| ||||||||  |||||||||||||||||||||||    
T  65603 tgtcataccccaaattttgtacacttttctctatttttacacat 65560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 26903396 - 26903355
Alignment:
Q  152 tcataccctaaattttgaccacttttctctatttttacacat 193  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26903396 tcataccctaaattttgaccacttttctctatttttacacat 26903355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 42249521 - 42249477
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  42249521 ttgtcataccccaaattttgaccacttttctctatttttacacat 42249477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 20917517 - 20917558
Alignment:
Q  147 ggttgtcataccctaaattttgaccacttttctctattttta 188  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  20917517 ggttgtcatactctaaattttgaccacttttctctattttta 20917558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 24285696 - 24285739
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  24285696 tgtcataccccaaattttgaccacttttctttatttttacacat 24285739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 24292372 - 24292415
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  24292372 tgtcataccccaaattttgaccacttttctttatttttacacat 24292415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 34070669 - 34070626
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  34070669 tgtcataccccaaattttgatcacttttctctatttttacacat 34070626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 15953140 - 15953098
Alignment:
Q  147 ggttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  15953140 ggttgtcataccccaaattttgaccacttttctctattcttac 15953098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 14582924 - 14582964
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  14582924 ttgtcataccccaaattttgaccacttttctctattcttac 14582964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 15944622 - 15944583
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  15944622 tgtcataccccaaattttgaccacttttctctattcttac 15944583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 17687463 - 17687424
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  17687463 tgtcataccccaaattttgaccacttttctctattcttac 17687424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 20621518 - 20621557
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  20621518 tgtcataccccaaattttgaccacttttctctattcttac 20621557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 25483600 - 25483635
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatt 184  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25483600 ttgtcataccccaaattttgaccacttttctctatt 25483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 25491206 - 25491241
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatt 184  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25491206 ttgtcataccccaaattttgaccacttttctctatt 25491241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 35138593 - 35138632
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  35138593 tgtcataccccaaattttgaccacttttctctattcttac 35138632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 35146929 - 35146968
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  35146929 tgtcataccccaaattttgaccacttttctctattcttac 35146968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 41233909 - 41233870
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  41233909 tgtcataccccaaattttgaccacttttctctattcttac 41233870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 20372378 - 20372345
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctat 183  Q
    |||||||||| |||||||||||||||||||||||    
T  20372378 tgtcataccccaaattttgaccacttttctctat 20372345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 38168423 - 38168383
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||| | |||||||||||||||||||||||| ||||    
T  38168423 ttgtcatactccaaattttgaccacttttctctattcttac 38168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 44372704 - 44372744
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| ||||||||||||||||| ||||| |||||    
T  44372704 ttgtcataccccaaattttgaccacttttttctatctttac 44372744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 44388615 - 44388655
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| ||||||||||||||||| ||||| |||||    
T  44388615 ttgtcataccccaaattttgaccacttttttctatctttac 44388655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 30542 - 30498
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  30542 ttgtcataccccaaattttgaccacttttctctatttttacacat 30498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 8197761 - 8197718
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  8197761 tgtcataccccaaattttgaccacttttctctatttttacacat 8197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 2211239 - 2211278
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  2211239 tgtcataccctaaattttgaccacttttctctattcttac 2211278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 17919199 - 17919237
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctattttta 188  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  17919199 tgtcataccccaaattttgaccacttttctctattttta 17919237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 16816268 - 16816230
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  16816268 tgtcataccc-aaattttgaccacttttctctatttttac 16816230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 17628265 - 17628304
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  17628265 tgtcataccccaaattttgaccacttttctctattcttac 17628304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 17933655 - 17933694
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  17933655 tgtcataccccaaattttgaccaattttctctatttttac 17933694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 18349560 - 18349599
Alignment:
Q  154 ataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  18349560 ataccccaaattttgacaacttttctctatttttacacat 18349599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 50824352 - 50824391
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  50824352 tgtcataccccaaattttgaccacttttctctattcttac 50824391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 50851508 - 50851469
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  50851508 tgtcataccccaaattttgaccacttttctctattcttac 50851469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 14538670 - 14538636
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatt 184  Q
    |||||||||| ||||||||||||||||||||||||    
T  14538670 tgtcataccccaaattttgaccacttttctctatt 14538636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 27341400 - 27341366
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatt 184  Q
    |||||||||| ||||||||||||||||||||||||    
T  27341400 tgtcataccccaaattttgaccacttttctctatt 27341366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 28470282 - 28470249
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctat 183  Q
    |||||||||| |||||||||||||||||||||||    
T  28470282 tgtcataccccaaattttgaccacttttctctat 28470249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 18039010 - 18039050
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| ||||||||||||||||||||  |||||||    
T  18039010 ttgtcataccccaaattttgaccacttttctcgctttttac 18039050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 438 - 395
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  438 tgtcataccccaaattttgaccacttttctctatttttacacat 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 4582204 - 4582247
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  4582204 tgtcataccttaaattttgaccacttttctctatttttacacat 4582247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 25579879 - 25579838
Alignment:
Q  148 gttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  25579879 gttgtcataccctaaattttgaccacttttatctattcttac 25579838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 30938280 - 30938321
Alignment:
Q  148 gttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  30938280 gttgtcataccccaaattttgaccacttttctctattcttac 30938321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 17973564 - 17973604
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  17973564 ttgtcataccccaaattttgaccacttttctctattcttac 17973604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 26876120 - 26876080
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  26876120 ttgtcataccccaaattttgaccacttttctctattcttac 26876080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 26873669 - 26873630
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  26873669 tgtcataccccaaattttgaccacttttctctattcttac 26873630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 17683862 - 17683828
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctat 183  Q
    ||||||||||| |||||||||||||||||||||||    
T  17683862 ttgtcataccccaaattttgaccacttttctctat 17683828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 17664705 - 17664672
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctat 183  Q
    |||||||||| |||||||||||||||||||||||    
T  17664705 tgtcataccccaaattttgaccacttttctctat 17664672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 1407139 - 1407099
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||| ||||||| ||||    
T  1407139 ttgtcataccccaaattttgaccactttcctctattcttac 1407099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 21498963 - 21498920
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  21498963 tgtcataccccaaattttgaccacttttctctatttttacacat 21498920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 35104130 - 35104090
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  35104130 ttgtcataccccaaattttgaccacttttctctattcttac 35104090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 29221553 - 29221514
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  29221553 tgtcataccccaaattttgactacttttctctatttttac 29221514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 31539954 - 31539993
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  31539954 tgtcataccccaaattttgaccacttttctctattcttac 31539993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 31548523 - 31548562
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  31548523 tgtcataccccaaattttgaccacttttctctattcttac 31548562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 52100017 - 52100060
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||    
T  52100017 tgtcatatcctaaattttgaccatttttctctgtttttacacat 52100060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 20314093 - 20314055
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctattttt 187  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  20314093 ttgtcataccccaaattttgaccacttttttctattttt 20314055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 44320259 - 44320218
Alignment:
Q  148 gttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||||| ||||||||||||||||||||  |||||||    
T  44320259 gttgtcataccccaaattttgaccacttttctcgctttttac 44320218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 15811 - 15852
Alignment:
Q  148 gttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  15811 gttgtcataccccaaattttgaccacttttctctatttttac 15852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 192528 - 192568
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttaca 190  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  192528 tgtcataccccaaattttgaccacttttctctatttttaca 192568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 10638327 - 10638367
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  10638327 ttgtcataccccaaattttgaccacttttctctatttttac 10638367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 27343757 - 27343717
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  27343757 ttgtcataccccaaattttgaccacttttctctatttttac 27343717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 12428545 - 12428508
Alignment:
Q  148 gttgtcataccctaaattttgaccacttttctctattt 185  Q
    |||||||||||| |||||||||||||||||||||||||    
T  12428545 gttgtcataccccaaattttgaccacttttctctattt 12428508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 8103154 - 8103114
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  8103154 ttgtcataccccaaattttgaccacttttctctattcttac 8103114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 8094347 - 8094308
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  8094347 tgtcataccccaaattttgaccacttttctctattcttac 8094308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 12996476 - 12996515
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  12996476 tgtcataccccaaattttgaccacttttctctattcttac 12996515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 52295604 - 52295643
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  52295604 tgtcataccccaaattttgaccacttttctctattcttac 52295643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 21532370 - 21532336
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctat 183  Q
    ||||||||||| |||||||||||||||||||||||    
T  21532370 ttgtcataccccaaattttgaccacttttctctat 21532336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 437 - 394
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  437 tgtcataccccaaattttgaccacttttctttatttttacacat 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 416 - 459
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttacacat 193  Q
    |||||||||||||||||||||||||||||| || ||||||||||    
T  416 tgtcataccctaaattttgaccacttttctttaattttacacat 459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 7255 - 7216
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  7255 tgtcataccctaaattttgaccacttttctctgtttttac 7216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 13490193 - 13490231
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctattttta 188  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  13490193 tgtcataccccaaattttgaccacttttctctattttta 13490231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 17725778 - 17725819
Alignment:
Q  28 caacagaagccaagaagcatgctcaaccgaaaagaacatcaa 69  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  17725778 caacagaagccaagaagcatgcccaaccgaaaagagcatcaa 17725819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 23925334 - 23925374
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  23925334 ttgtcataccccaaattttgaccacttttctctattcttac 23925374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 30824595 - 30824555
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  30824595 ttgtcataccccaaattttgaccacttttctctattcttac 30824555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 5004061 - 5004100
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  5004061 tgtcataccccaaattttgaccacttttctctattcttac 5004100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 5489184 - 5489145
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  5489184 tgtcataccccaaattttgaccacttttctctattcttac 5489145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 5994699 - 5994738
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  5994699 tgtcataccccaaattttgaccacttttctctattcttac 5994738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 11053702 - 11053741
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  11053702 tgtcataccccaaattttgaccacttttttctatttttac 11053741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 25550295 - 25550334
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  25550295 tgtcataccccaaattttgaccacttttctctattcttac 25550334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 35091741 - 35091702
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  35091741 tgtcataccccaaattttgaccacttttctctattcttac 35091702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 11279836 - 11279876
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||| ||||||| ||||    
T  11279836 ttgtcataccccaaattttgaccactttcctctattcttac 11279876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 25506607 - 25506567
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| ||||||||| |||||||||||||| ||||    
T  25506607 ttgtcataccccaaattttgatcacttttctctattcttac 25506567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 10991 - 11032
Alignment:
Q  148 gttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  10991 gttgtcataccccaaattttgaccacttttctctattcttac 11032  T

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Target: scaffold0431 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 137 - 174
Alignment:
Q  148 gttgtcataccctaaattttgaccacttttctctattt 185  Q
    |||||||||||| |||||||||||||||||||||||||    
T  137 gttgtcataccccaaattttgaccacttttctctattt 174  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 65743 - 65710
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctat 183  Q
    ||||||||||||||||||||||||||||||||||    
T  65743 tgtcataccctaaattttgaccacttttctctat 65710  T

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Target: scaffold0111 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 33034 - 33074
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  33034 ttgtcataccccaaattttgaccacttttctctattcttac 33074  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 121227 - 121267
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  121227 ttgtcataccccaaattttgaccacttttctctattcttac 121267  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 12978454 - 12978494
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  12978454 ttgtcataccccaaattttgaccacttttctctattcttac 12978494  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 4941642 - 4941603
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  4941642 tgtcataccccaaattttgaccacttttctctattcttac 4941603  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 13831500 - 13831539
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  13831500 tgtcataccctaaattttgaccactttcctctattcttac 13831539  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 18304457 - 18304418
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  18304457 tgtcataccccaaattttgaccacttttctctattcttac 18304418  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 30244774 - 30244813
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctattttta 188  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  30244774 ttgtcatacctcaaattttgaccacttttctctattttta 30244813  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 30245567 - 30245606
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctattttta 188  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  30245567 ttgtcatacccaaatttttgaccacttttctctattttta 30245606  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 30255412 - 30255450
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctattttta 188  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  30255412 ttgtcataccc-aaattttgaccacttttctctattttta 30255450  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 10439937 - 10439971
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatt 184  Q
    |||||||||| ||||||||||||||||||||||||    
T  10439937 tgtcataccccaaattttgaccacttttctctatt 10439971  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 31421788 - 31421828
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  31421788 ttgtcatacccaaaattttgaccacttttctctattcttac 31421828  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 41099838 - 41099798
Alignment:
Q  153 cataccctaaattttgaccacttttctctatttttacacat 193  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  41099838 cataccccaaattttgaccacttttatctatttttacacat 41099798  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 19223554 - 19223589
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatt 184  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19223554 ttgtcataccccaaattttgaccacttttctctatt 19223589  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 20372978 - 20372939
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  20372978 tgtcataccccaaattttgaccacttttctctattcttac 20372939  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 20398700 - 20398661
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  20398700 tgtcataccccaaattttgaccacttttctctattcttac 20398661  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 23350141 - 23350102
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  23350141 tgtcataccccaaattttgaccatttttctctatttttac 23350102  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 24956911 - 24956872
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  24956911 tgtcataccccaaattttgaccacttttctctattcttac 24956872  T

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Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 24965374 - 24965335
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  24965374 tgtcataccccaaattttgaccacttttctctattcttac 24965335  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 29186344 - 29186310
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctat 183  Q
    ||||||||||| |||||||||||||||||||||||    
T  29186344 ttgtcataccccaaattttgaccacttttctctat 29186310  T

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Target: scaffold0156 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 35421 - 35382
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  35421 tgtcataccccaaattttgaccacttttctctattcttac 35382  T

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Target: scaffold0048 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 7694 - 7655
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  7694 tgtcataccccaaattttgaccacttttctctattcttac 7655  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 40899 - 40864
Alignment:
Q  149 ttgtcataccctaaattttgaccacttttctctatt 184  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40899 ttgtcataccccaaattttgaccacttttctctatt 40864  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 23464 - 23503
Alignment:
Q  150 tgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  23464 tgtcataccccaaattttgaccacttttctctattcttac 23503  T

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Target: scaffold0209 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 151 - 110
Alignment:
Q  148 gttgtcataccctaaattttgaccacttttctctatttttac 189  Q
    |||||||||||| |||||||||||||||| ||||||| ||||    
T  151 gttgtcataccccaaattttgaccactttcctctattcttac 110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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