View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0673_low_89 (Length: 263)
Name: NF0673_low_89
Description: NF0673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0673_low_89 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 32 - 263
Target Start/End: Complemental strand, 27375716 - 27375489
Alignment:
| Q |
32 |
tggacatcatcaaagcgcatcacaaaatgtccttaaaagcaccatcaactatcaacctttttcaaatggaaacatttgatgtagtgtatgccaatcatgc |
131 |
Q |
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| T |
27375716 |
tggacatcatcaaagcgcatcacaaaatgtccttaaaagcaccatcaactatcaacctttttcaaatggaaacatttgatgtagtgtatgccaatcatgc |
27375617 |
T |
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| Q |
132 |
catgttccacttccaacaatatgtgtactacttactagtactgttctcattccaaccagattttgaaaagtgaagaaaaaataatgtcacactttaatca |
231 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27375616 |
catgttccacttccaacaatatgtgtac----tactagtactgttctcattccaaccagattttgaaaagtgaagaaaaaataatgtcacactttaatca |
27375521 |
T |
|
| Q |
232 |
tcagaataatgtttgatgcagcttattgattt |
263 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
27375520 |
tcagaataatgtttgatgcagcttattgattt |
27375489 |
T |
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