View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0674_low_33 (Length: 319)

Name: NF0674_low_33
Description: NF0674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0674_low_33
NF0674_low_33
[»] chr5 (14 HSPs)
chr5 (30-282)||(2826933-2827185)
chr5 (112-297)||(28070012-28070189)
chr5 (112-249)||(13362799-13362936)
chr5 (125-253)||(23335601-23335730)
chr5 (125-199)||(16668743-16668817)
chr5 (112-259)||(25017121-25017253)
chr5 (125-198)||(18465506-18465579)
chr5 (211-297)||(34329247-34329331)
chr5 (182-253)||(42512273-42512344)
chr5 (125-198)||(8948932-8949003)
chr5 (108-179)||(34329152-34329223)
chr5 (112-155)||(42512228-42512271)
chr5 (263-297)||(25017052-25017086)
chr5 (125-175)||(33868198-33868248)
[»] chr3 (15 HSPs)
chr3 (112-297)||(50754035-50754220)
chr3 (112-297)||(52987499-52987686)
chr3 (112-297)||(51362288-51362474)
chr3 (112-297)||(7045150-7045336)
chr3 (112-297)||(19385168-19385351)
chr3 (112-253)||(8718130-8718271)
chr3 (112-253)||(9070017-9070158)
chr3 (112-251)||(39099226-39099365)
chr3 (108-222)||(16277340-16277454)
chr3 (125-198)||(23699370-23699443)
chr3 (125-198)||(23717825-23717898)
chr3 (125-198)||(23736281-23736354)
chr3 (125-182)||(17627197-17627254)
chr3 (153-198)||(23755349-23755394)
chr3 (222-280)||(31852245-31852305)
[»] chr7 (16 HSPs)
chr7 (112-297)||(46573349-46573536)
chr7 (112-259)||(30428902-30429049)
chr7 (112-297)||(15974785-15974972)
chr7 (112-259)||(46024056-46024205)
chr7 (125-220)||(33797973-33798068)
chr7 (112-198)||(5757416-5757502)
chr7 (129-297)||(48691038-48691200)
chr7 (125-198)||(32090620-32090693)
chr7 (211-297)||(48305356-48305444)
chr7 (211-297)||(28396842-28396930)
chr7 (112-179)||(48690924-48690991)
chr7 (112-182)||(12279670-12279740)
chr7 (108-182)||(12279770-12279844)
chr7 (125-173)||(44141226-44141274)
chr7 (112-179)||(28396751-28396818)
chr7 (112-174)||(48305265-48305327)
[»] chr6 (8 HSPs)
chr6 (125-297)||(24737542-24737714)
chr6 (112-297)||(33346220-33346407)
chr6 (125-297)||(877250-877419)
chr6 (112-198)||(29157255-29157341)
chr6 (125-198)||(18611231-18611304)
chr6 (112-182)||(34399670-34399740)
chr6 (133-198)||(15034920-15034990)
chr6 (112-158)||(35119264-35119310)
[»] chr8 (14 HSPs)
chr8 (112-297)||(4836550-4836737)
chr8 (112-297)||(4841995-4842182)
chr8 (112-297)||(7058143-7058330)
chr8 (112-297)||(8550533-8550720)
chr8 (112-259)||(32987334-32987481)
chr8 (112-253)||(39022004-39022145)
chr8 (112-253)||(15260746-15260887)
chr8 (125-220)||(7614110-7614205)
chr8 (159-282)||(2750101-2750228)
chr8 (211-297)||(1208829-1208915)
chr8 (226-297)||(39658392-39658463)
chr8 (125-198)||(15181833-15181906)
chr8 (112-179)||(1208738-1208805)
chr8 (130-171)||(1671850-1671891)
[»] chr4 (17 HSPs)
chr4 (102-297)||(637873-638068)
chr4 (112-297)||(26447261-26447448)
chr4 (125-297)||(51836939-51837114)
chr4 (112-297)||(45256004-45256193)
chr4 (112-253)||(27764269-27764410)
chr4 (112-259)||(4168387-4168536)
chr4 (112-253)||(21097169-21097310)
chr4 (112-253)||(22181140-22181281)
chr4 (112-253)||(38485567-38485710)
chr4 (112-220)||(36621629-36621737)
chr4 (125-198)||(50563679-50563752)
chr4 (175-259)||(18923351-18923435)
chr4 (125-173)||(6386516-6386564)
chr4 (151-195)||(48077817-48077861)
chr4 (109-159)||(1729604-1729654)
chr4 (263-297)||(18923470-18923504)
chr4 (256-297)||(27764451-27764492)
[»] chr1 (10 HSPs)
chr1 (125-297)||(22348081-22348255)
chr1 (125-297)||(179650-179824)
chr1 (112-259)||(18056813-18056960)
chr1 (125-297)||(8402158-8402334)
chr1 (125-249)||(23319984-23320108)
chr1 (112-253)||(45889625-45889766)
chr1 (125-220)||(30802438-30802533)
chr1 (125-198)||(37639384-37639457)
chr1 (125-198)||(35198131-35198204)
chr1 (112-198)||(16115880-16115966)
[»] chr2 (11 HSPs)
chr2 (112-297)||(18297960-18298147)
chr2 (112-297)||(25192921-25193108)
chr2 (112-259)||(20709803-20709950)
chr2 (124-198)||(4281738-4281812)
chr2 (211-297)||(4579675-4579763)
chr2 (125-198)||(25995329-25995402)
chr2 (125-179)||(14551288-14551342)
chr2 (125-179)||(4579787-4579841)
chr2 (138-198)||(43822409-43822469)
chr2 (125-175)||(5098759-5098809)
chr2 (125-173)||(36636912-36636960)
[»] scaffold0097 (1 HSPs)
scaffold0097 (112-259)||(13642-13789)
[»] scaffold0238 (1 HSPs)
scaffold0238 (112-297)||(25074-25268)
[»] scaffold0194 (1 HSPs)
scaffold0194 (125-259)||(27649-27785)
[»] scaffold0337 (1 HSPs)
scaffold0337 (108-182)||(7042-7116)
[»] scaffold0544 (1 HSPs)
scaffold0544 (112-181)||(10642-10711)


Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 30 - 282
Target Start/End: Complemental strand, 2827185 - 2826933
Alignment:
Q  30 tgttttgtgcttagcgagagatttctatttgacttaaaactcttccttggggagcggtcatattttcaagcaaaagttatctttatccaccgtatataaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |||||    
T  2827185 tgttttgtgcttagcgagagatttctatttgacttaaaactcttccttggggagcggttatattttcacgcaaaagttatctttatccaccgtgcataaa 2827086  T
Q  130 cacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatctcacta 229  Q
    ||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2827085 cactttacaaccatcagatctagtgtacacgtgtaattatcttaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatctcacta 2826986  T
Q  230 aaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccg 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2826985 aaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccg 2826933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 28070189 - 28070012
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  28070189 ttatgcaccgtgcataaacacttcacaactatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaacttcatttgctt 28070090  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| |||||||||||||||||||        ||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  28070089 caaacatttctctcactaaaacataaagc--------tctctacaattcagatgagtcttcatctcttccggccacacatgatgat 28070012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 112 - 249
Target Start/End: Original strand, 13362799 - 13362936
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  13362799 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtatacgtgtaataatcataggcttctcaaactacaccaaatcaaaattcatttgctt 13362898  T
Q  212 caaacatttatctcactaaaacataaagctctccctct 249  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  13362899 caaacatttctctcactaaaacataaagctttccctct 13362936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 23335730 - 23335601
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatct 224  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||| |||    
T  23335730 ataaacatttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaactacaccaaatcaaagttcatttgcatcaaacatttctct 23335631  T
Q  225 cact-aaaacataaagctctccctctctct 253  Q
    |||| |||||||||||||||||||||||||    
T  23335630 cactaaaaacataaagctctccctctctct 23335601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 16668817 - 16668743
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16668817 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaa 16668743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 259
Target Start/End: Complemental strand, 25017253 - 25017121
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||               ||||||||||    
T  25017253 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattttaggtttctcaaact---------------tcatttgctt 25017169  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctctacaatt 259  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25017168 caaacatttctctcactaaaacataaagctctccctctctctacaatt 25017121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 18465579 - 18465506
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  18465579 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcttagacttctcaaactacaccaaatcaa 18465506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 34329247 - 34329331
Alignment:
Q  211 tcaaacatttatctcactaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||| | ||||||||||||    
T  34329247 tcaaacatttctctcactaaaacataaagctctc--tctctctacaattcagatgggtcttcatctcttccggccacacatgatgat 34329331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 42512273 - 42512344
Alignment:
Q  182 aaactacaccaaatcaaatttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctct 253  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||||||||||    
T  42512273 aaactacaccaaatcaaacttcatttacttcaaacatttctctcactaaaacctaaagctctccctctctct 42512344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 8948932 - 8949003
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||||||||||| ||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  8948932 ataaacacttcaaaactatcagatttagtgtacacgtg--ataatcctaggcttctcaaactacaccaaatcaa 8949003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 34329152 - 34329223
Alignment:
Q  108 atctttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 179  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  34329152 atctttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgaataataatcataggcttc 34329223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 42512228 - 42512271
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgt 155  Q
    |||||||||||  |||||||||||||||||||||||||||||||    
T  42512228 ttatccaccgtgcataaacacttcacaaccatcagatctagtgt 42512271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 297
Target Start/End: Complemental strand, 25017086 - 25017052
Alignment:
Q  263 atgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||||||||||||| ||||||||||||||    
T  25017086 atgagtcttcatctcttccggcaacacatgatgat 25017052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 33868198 - 33868248
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagg 175  Q
    |||||||||||||||||||| ||| || | |||| ||||||||||||||||    
T  33868198 ataaacacttcacaaccatctgatttattttacatgtgtaataatcctagg 33868248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 7e-77; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 50754035 - 50754220
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  50754035 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgatt 50754134  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  50754135 caaacacttctctcactaaaacataaagctctccctctctctacaattcagatgagtcttaatctcttccgaccacacatgatgat 50754220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 52987686 - 52987499
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  52987686 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgctt 52987587  T
Q  212 caaacatttatctcactaaaacataaagctctccctct--ctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||| |||| ||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||| || | ||||||||||||    
T  52987586 caaatatttctctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctctttcggccacacatgatgat 52987499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 51362474 - 51362288
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51362474 ttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgctt 51362375  T
Q  212 caaacatttatctcactaaaacataaagctctcc--ctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| ||||||||||||||||| || |||  |||||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  51362374 caaacatttctctcactaaaacataaa-ctttccctctctctctacaattcagatgagtcttcatctcttccggccacacatgatgat 51362288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 7045336 - 7045150
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| || ||||||||    
T  7045336 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcgtaggcttctcagactacatcaaatcaaactt-atttgctt 7045238  T
Q  212 caaacatttatctcactaaaacataaagctctcc--ctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||  | ||||||||||||    
T  7045237 caaacatttctctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccagccacacatgatgat 7045150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 19385351 - 19385168
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||    
T  19385351 ttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataattctaggcttctcaaactacatcaaatcaaacttcatttgctt 19385252  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||| |||||  |||||||||||||||| ||||||||  |||||||||||| |||||||||||||||||||| | ||| ||||||||    
T  19385251 caatcatttccctcactaaaacataaaactctccct--ctctacaattcagatgagtcttcatctcttccggccacagatgatgat 19385168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 8718130 - 8718271
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| ||    
T  8718130 ttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttcttaaactacaccaaatcaaacttcatttgttt 8718229  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctct 253  Q
     |||||||| |||||||||||||||||||| |||||||||||    
T  8718230 aaaacatttctctcactaaaacataaagctttccctctctct 8718271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 9070017 - 9070158
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| ||    
T  9070017 ttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttcttaaactacaccaaatcaaacttcatttgttt 9070116  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctct 253  Q
     |||||||| |||||||||||||||||||| |||||||||||    
T  9070117 aaaacatttctctcactaaaacataaagctttccctctctct 9070158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 112 - 251
Target Start/End: Original strand, 39099226 - 39099365
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||    
T  39099226 ttatgcaccgtgcataaatatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacactaaatcaaacttcatttgttt 39099325  T
Q  212 caaacatttatctcactaaaacataaagctctccctctct 251  Q
     |||||||| ||||||||||||||||||||||||||||||    
T  39099326 aaaacatttctctcactaaaacataaagctctccctctct 39099365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 16277454 - 16277340
Alignment:
Q  108 atctttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcattt 207  Q
    |||||||| ||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  16277454 atctttatgcaccgtgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacttcattt 16277355  T
Q  208 gcttcaaacatttat 222  Q
    | |||||||||||||    
T  16277354 gtttcaaacatttat 16277340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 23699370 - 23699443
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  23699370 ataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23699443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 23717825 - 23717898
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  23717825 ataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23717898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 23736281 - 23736354
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  23736281 ataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23736354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 17627254 - 17627197
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  17627254 ataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggtttctca 17627197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 23755349 - 23755394
Alignment:
Q  153 tgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||    
T  23755349 tgtacacgtgtaataatcctaggcttctcaaattacatcaaatcaa 23755394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 31852245 - 31852305
Alignment:
Q  222 tctcactaaaacataaagctctcc--ctctctctacaattcaaatgagtcttcatctcttc 280  Q
    |||||||||||||||||| |||||  ||||||||||| |||| ||||||||||||||||||    
T  31852245 tctcactaaaacataaagttctccctctctctctacagttcagatgagtcttcatctcttc 31852305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 46573536 - 46573349
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46573536 ttatgcaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgctt 46573437  T
Q  212 caaacatttatctcactaaaacataaagctctccctctc--tctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |   ||||||||||||    
T  46573436 caaacatttctctcactaaaacataaagctctccctctctatctacaattcagatgagtcttcatctcttcagggcacacatgatgat 46573349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 30428902 - 30429049
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30428902 ttatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgctt 30429001  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctctacaatt 259  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30429002 caaacatttatctcactaaaacataaagctccccctctctctacaatt 30429049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 15974972 - 15974785
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||| || |||||||||| |||||||||| ||||||| ||||| |||||||||||||| ||||| |||||    
T  15974972 ttatgcaccgtgcataaacacttcacaaccatcatatttagtgtacacatgtaataatcttaggcttatcaaagtacaccaaatcaaacttcatctgctt 15974873  T
Q  212 caaacatttatctcactaaaacataaagc--tctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||||| ||| |||||||||||||||||||||  ||||||||||||    
T  15974872 caaacatttctctcactaaaacataaagctctctccctctctgtacaagtcagatgagtcttcatctcttccgatcacacatgatgat 15974785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 46024056 - 46024205
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||  |||||||| |||||||||||    
T  46024056 ttatgcaccgtgcataaacacttcacaaccatcagatatagtgtacacgtgtaataatcctagacttctcaaactacattaaatcaaacttcatttgctt 46024155  T
Q  212 caaacatttatctcactaaaacataaagctctccctc--tctctacaatt 259  Q
    |||| |||| |||||||||||||||||| ||||||||  |||||||||||    
T  46024156 caaatatttctctcactaaaacataaagttctccctctatctctacaatt 46024205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 33797973 - 33798068
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacattt 220  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  33797973 ataaacatttcacaaccatcagatctagtatacacgtgtaataatcctagacttctcaaactacatcaaatcaaacttcatttgcttcaaacattt 33798068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 5757416 - 5757502
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5757416 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaa 5757502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 297
Target Start/End: Original strand, 48691038 - 48691200
Alignment:
Q  129 acacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgct-tcaaacatttatctcac 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   | ||  ||      || | ||  |  || ||||| |||| ||||||    
T  48691038 acacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc---atctctac------aattatccctccctctcaaaaatttctctcac 48691128  T
Q  228 taaaacataaagctctccctct--ctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| | ||||||||||||    
T  48691129 taaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggccacacatgatgat 48691200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 32090620 - 32090693
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    ||||||| |||| |||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  32090620 ataaacaattcagaaccatcaaatctagtatacacgtgtaataatcataggcttctcaaactacaccaaatcaa 32090693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 48305356 - 48305444
Alignment:
Q  211 tcaaacatttatctcactaaaacataaagctctccctct--ctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||| ||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||| |||||| | ||||||||||||    
T  48305356 tcaaacatttctctcaataaaacataaagctctccctctctctctacaattcagatgagtcttcatcacttccggccacacatgatgat 48305444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 28396842 - 28396930
Alignment:
Q  211 tcaaacatttatctcactaaaacataaagctctccctctctcta--caattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||| ||||| |||||||||||| |||||||||||||   ||||||| |||||||||||||||||||| | ||||||||||||    
T  28396842 tcaaacatttctctcaataaaacataaagttctccctctctctctgcaattcagatgagtcttcatctcttccggccacacatgatgat 28396930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 48690924 - 48690991
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 179  Q
    |||| ||||||  ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  48690924 ttatgcaccgtgcataaacagttcacaaccatcaaatctagtgtacacgtgtaataatcataggcttc 48690991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 12279670 - 12279740
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 182  Q
    |||| |||||| |||||| ||||||||||||| ||||| |||||||||||||||| ||||||||| |||||    
T  12279670 ttatgcaccgtgtataaagacttcacaaccattagatccagtgtacacgtgtaatgatcctaggcctctca 12279740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 12279770 - 12279844
Alignment:
Q  108 atctttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 182  Q
    |||||||| ||||||  ||||| ||||||||||||| |||||||||||| ||||||||| ||||||||| |||||    
T  12279770 atctttatgcaccgtgcataaagacttcacaaccattagatctagtgtatacgtgtaatgatcctaggcctctca 12279844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 44141274 - 44141226
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 173  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  44141274 ataaacacttcacaaccatctgatttagtgtacacgtgtaataatccta 44141226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 28396751 - 28396818
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 179  Q
    |||| ||||||  ||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||    
T  28396751 ttatgcaccgtgcataaacatttcacaatcatcagatctagtgtacaagagtaataatcctaggcttc 28396818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 48305265 - 48305327
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctag 174  Q
    |||| ||||||  |||||||||| |||| |||| |||||||||||||||| ||||||||||||    
T  48305265 ttatgcaccgtgcataaacactttacaaacatcggatctagtgtacacgtataataatcctag 48305327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 3e-76; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 125 - 297
Target Start/End: Complemental strand, 24737714 - 24737542
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatct 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||    
T  24737714 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttcttaaactacaccaaatcaaacttcatttgcttcaaacatttctct 24737615  T
Q  225 cactaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  24737614 cactaaaacataaaactctccctctctctacaattcagatgagtcttcatctcttccggccacacatgatgat 24737542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 33346407 - 33346220
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||  ||||||||| ||| |||||||    
T  33346407 ttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtgtaataattataggcttctcaaactacgtcaaatcaaacttcgtttgctt 33346308  T
Q  212 caaacatttatctcactaaaacataaagctctccctct--ctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| |||||||||||||||||| |||||||||  |||||||||||| ||||||||||||||||| || | ||||||||||||    
T  33346307 caaacatttctctcactaaaacataaagttctccctctctctctacaattcagatgagtcttcatctctttcggccacacatgatgat 33346220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 125 - 297
Target Start/End: Original strand, 877250 - 877419
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatct 224  Q
    ||||||||||||||||||| |||||  |||||||||| |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  877250 ataaacacttcacaaccattagatcaggtgtacacgtataataatcataagcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctct 877349  T
Q  225 cactaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||| ||||||||||||||||||||||||   | |||||||||||||||| | | ||||||||||||    
T  877350 cactaaaacaaaaagctctccctctctctacaatt---aggagtcttcatctcttcaggccacacatgatgat 877419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 29157255 - 29157341
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||| ||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29157255 ttatgcaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaataatactaggcttctcaaactacaccaaatcaa 29157341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 18611231 - 18611304
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  18611231 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaaccacaccaaatcaa 18611304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 34399670 - 34399740
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 182  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34399670 ttatgcaccgtatataaacacttcacaatcatcagatctagtgtacacgtgtaataatcctaggcttctca 34399740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 15034990 - 15034920
Alignment:
Q  133 ttcacaaccatcagatctagtgtacacgtgtaataatcctaggct-----tctcaaactacaccaaatcaa 198  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||     |||||||||||||||||||||    
T  15034990 ttcacaaccatcagatctagtgtacatgtgtaataatcataggcttctcctctcaaactacaccaaatcaa 15034920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 35119264 - 35119310
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtaca 158  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||    
T  35119264 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 35119310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 6e-74; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 4836737 - 4836550
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  4836737 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaactacaccaaatcaaacttcatttgctt 4836638  T
Q  212 caaacatttatctcactaaaacataaagctctccctct--ctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| | ||||||||||||    
T  4836637 caaacatttatctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggccacacatgatgat 4836550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 4842182 - 4841995
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  4842182 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaactacaccaaatcaaacttcatttgctt 4842083  T
Q  212 caaacatttatctcactaaaacataaagctctccctct--ctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| | ||||||||||||    
T  4842082 caaacatttatctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggccacacatgatgat 4841995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 7058143 - 7058330
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  7058143 ttatgcaccgtgcataaacacttcacaaccatccgatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaacttcatttgctt 7058242  T
Q  212 caaacatttatctcactaaaacataaagctctcc--ctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||| || ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||| || | ||||||||||||    
T  7058243 caaacacttctctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctctttcggccacacatgatgat 7058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 8550533 - 8550720
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| |||||||||||    
T  8550533 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataagcttctcaaattacaccaaatcaaacttcatttgctt 8550632  T
Q  212 caaacatttatctcactaaaacataaagctctccctc--tctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| |||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||| || | ||||||||||||    
T  8550633 caaacatttctctcactaaaacataaagttctccctctttctctacaattcagatgagtcttcatctcttacggccacacatgatgat 8550720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 112 - 259
Target Start/End: Complemental strand, 32987481 - 32987334
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32987481 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgctt 32987382  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctctacaatt 259  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  32987381 caaacatttctctaactaaaacataaagctctccctctctctacaatt 32987334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 39022004 - 39022145
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39022004 ttatgcaccgtgcataaacacttcacaatcatcagatctagtgtacatgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgctt 39022103  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39022104 caaacatttatctcactaaaacataaagctctccctctctct 39022145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 112 - 253
Target Start/End: Complemental strand, 15260887 - 15260746
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  15260887 ttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtttaataatccaaggcttctcaaactacaccaaatcaaacttcatttgctt 15260788  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctct 253  Q
    |||| |||| ||||||||||| ||||| ||||||||||||||    
T  15260787 caaatatttctctcactaaaatataaaactctccctctctct 15260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 7614110 - 7614205
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacattt 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7614110 ataaacacttcacaaccatcagatctaatgtacacgtgtaataatcataggcttctcaaactacaccaaatcaaacttcatttgcttcaaacattt 7614205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 2750101 - 2750228
Alignment:
Q  159 cgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatctcactaaaacataaagctctcc----ctctctcta 254  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||||| |||||||    |||||||||    
T  2750101 cgtgtaataatcatagacttctcaaactacaccaaatcaaacttcatttactttaaacatttctctcactaaaacataatgctctccctcactctctcta 2750200  T
Q  255 caattcaaatgagtcttcatctcttccg 282  Q
    ||||||| ||||||||||||||||||||    
T  2750201 caattcagatgagtcttcatctcttccg 2750228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 1208829 - 1208915
Alignment:
Q  211 tcaaacatttatctcactaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | ||||||||||||    
T  1208829 tcaaacatttctctcactaaaacataaagctctccctctctctacaattcagatgagtcttcatctcttgcggccacacatgatgat 1208915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 39658463 - 39658392
Alignment:
Q  226 actaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  39658463 actaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccggccacacatgatgat 39658392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 15181833 - 15181906
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  15181833 ataaacacttcacaagcatcagatctagtgtacacgtgtaataatcttaggtttctcaaactacaccaaatcaa 15181906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 1208738 - 1208805
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 179  Q
    |||| ||||||  |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  1208738 ttatgcaccgtgcataaacactttacaaccataagatctagtgtacacgtgtaataatcctaggcttc 1208805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 1671850 - 1671891
Alignment:
Q  130 cacttcacaaccatcagatctagtgtacacgtgtaataatcc 171  Q
    |||||||||| |||||||| ||||||| ||||||||||||||    
T  1671850 cacttcacaatcatcagatttagtgtatacgtgtaataatcc 1671891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 637873 - 638068
Alignment:
Q  102 aaagttatctttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatt 201  Q
    |||||||| ||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||| |    
T  637873 aaagttatgtttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataattttaggcttctcaaactacaccaaatcaaact 637972  T
Q  202 tcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| | ||||| ||||||    
T  637973 tcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctacaatttagatgagtcttcatctcttccggccacacacgatgat 638068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 26447448 - 26447261
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  26447448 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcacaaattacaccaaatcaaatttcatttgctt 26447349  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctc--tacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| |||||||||||||||||| ||||||||||||  ||||||||| ||||||| |||||||||||| | ||||||||||||    
T  26447348 caaacatttctctcactaaaacataaagttctccctctctctatacaattcagatgagtcctcatctcttccggccacacatgatgat 26447261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 125 - 297
Target Start/End: Complemental strand, 51837114 - 51836939
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttca-tttgcttcaaacatttatc 223  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||    
T  51837114 ataaatacttcacaaccatcagatttaatgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcattttacttcaaacatttctc 51837015  T
Q  224 tcactaaaacataaagctctcc--ctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  51837014 tcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggccacacatgatgat 51836939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 45256004 - 45256193
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  45256004 ttatgcaccgtgcataaacacttcacaactatcagatatagtgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaaacttcatttgctt 45256103  T
Q  212 caaacatttatctcactaaaacataaagctctcc----ctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| ||||||||||||||||||||| ||    |||||||||||||||| |||||||||||||||||||| | ||||| ||||||    
T  45256104 caaacatttctctcactaaaacataaagctccccccctctctctctacaattcagatgagtcttcatctcttccggccacacaggatgat 45256193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 27764269 - 27764410
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  | ||||||||    
T  27764269 ttatgcaccgtgcataaacacttcgcaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaaccttatttgctt 27764368  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctct 253  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  27764369 caaacatttctctcactaaaacataaagttctccctctctct 27764410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 4168387 - 4168536
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||| ||    
T  4168387 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactacaccaaatcaaacttcatttgttt 4168486  T
Q  212 caaacatttatctcactaaaacataaagctctccctc--tctctacaatt 259  Q
    ||||||||| |||||||||||||||||||| || |||  |||||||||||    
T  4168487 caaacatttctctcactaaaacataaagctttcactctatctctacaatt 4168536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 21097169 - 21097310
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| |||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||| | ||| |||||||||||||| |||||||||||    
T  21097169 ttatgcaccgtgtataaacacttcacaaccattagatctagtttacacgtgtaataattctaagcttattaaattacaccaaatcaaacttcatttgctt 21097268  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctct 253  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  21097269 caaacatttctctcactaaaacataaagctctccctctctct 21097310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 112 - 253
Target Start/End: Complemental strand, 22181281 - 22181140
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |    
T  22181281 ttatgcaccgtgcataaaaacttcacaaccatcagatttagtgtacacgtgtaataatcctaggtttctcaaactacaccaaatcaaacttcatttgcct 22181182  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctct 253  Q
    ||||||||| |||||||||||||||||||| | |||||||||    
T  22181181 caaacatttctctcactaaaacataaagcttttcctctctct 22181140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 112 - 253
Target Start/End: Complemental strand, 38485710 - 38485567
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  38485710 ttatgcaccgtgcataaacgcttcacaaccatcagatctaatgtacacgtgtaataatcctaggcttctcaaaatacattaaatcaaacttcatttgctt 38485611  T
Q  212 caaacatttatctcact--aaaacataaagctctccctctctct 253  Q
    ||||||||| |||||||  ||||||||||| |||||||||||||    
T  38485610 caaacatttctctcactaaaaaacataaagatctccctctctct 38485567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 36621737 - 36621629
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  36621737 ttatgcaccgtgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcctatgcttcttaaactacaccaaatcaaacttcatttgctt 36621638  T
Q  212 caaacattt 220  Q
    |||||||||    
T  36621637 caaacattt 36621629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 50563752 - 50563679
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  50563752 ataaacacttcacaaccatcagatctagtgtacacgtgtaataattataggtttctcaaactacaccaaatcaa 50563679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 18923351 - 18923435
Alignment:
Q  175 gcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctacaatt 259  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||||||||| || |||||||||||||||||    
T  18923351 gcttctcaaactacaccaaatcaaacttcatttgcttcaaatatttctgtcactaaaacataaaactatccctctctctacaatt 18923435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 6386564 - 6386516
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 173  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  6386564 ataaacacttcacaaccatcagatttagtggacacgtgtaataatccta 6386516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 48077861 - 48077817
Alignment:
Q  151 agtgtacacgtgtaataatcctaggcttctcaaactacaccaaat 195  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  48077861 agtgtacatgtgtaataatcctaggcttctcaaactacaccaaat 48077817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 1729654 - 1729604
Alignment:
Q  109 tctttatccaccgtatataaacacttcacaaccatcagatctagtgtacac 159  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  1729654 tctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacac 1729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 297
Target Start/End: Original strand, 18923470 - 18923504
Alignment:
Q  263 atgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||||||||||||||| ||||||||||||    
T  18923470 atgagtcttcatctcttccgaccacacatgatgat 18923504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 27764451 - 27764492
Alignment:
Q  256 aattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||| |||||||||||||||||||| | ||||||||||||    
T  27764451 aattcagatgagtcttcatctcttccggccacacatgatgat 27764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 125 - 297
Target Start/End: Original strand, 22348081 - 22348255
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatct 224  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  22348081 ataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctct 22348180  T
Q  225 cactaaaacataaagctctcc--ctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  22348181 cactaaaacataaagctctccctctctctctacaattcatatgagtcttcatctcttccggccacacatgatgat 22348255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 125 - 297
Target Start/End: Original strand, 179650 - 179824
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||||||| |||    
T  179650 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcccaagcttctcaaactacaccaaatcaaacttcatttgcttaaaacatttctct 179749  T
Q  225 cactaaaacataaagctctcc--ctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||| || | ||||||||||||    
T  179750 cactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctctttcggccacacatgatgat 179824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 18056813 - 18056960
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18056813 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgctt 18056912  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctctacaatt 259  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  18056913 caaacatttctctcactaaaacataaaactctccctctctctacaatt 18056960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 125 - 297
Target Start/End: Complemental strand, 8402334 - 8402158
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatct 224  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||| |||    
T  8402334 ataaacacttcataaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactaaaccaaatcaaacttcatctgcttcaaacatttctct 8402235  T
Q  225 cactaaaacataaagc----tctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||||||||||    |||| |||||||||||||||| |||||||||||||| ||||| | | ||||||||||    
T  8402234 cactaaaacataaagctctctctctctctctctacaattcagatgagtcttcatcttttccggccaaacatgatgat 8402158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 23320108 - 23319984
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatct 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| |||    
T  23320108 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaacttcatttgctttaaacatttctct 23320009  T
Q  225 cactaaaacataaagctctccctct 249  Q
    ||||||||||||||||| |||||||    
T  23320008 cactaaaacataaagctatccctct 23319984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 45889625 - 45889766
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||||||||||  ||||||| || |||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  45889625 ttatccaccgtgcataaacattttacaaccatcagatctagtatacatgtgtaataatcttaggcttctcaaactacaccaaatcaaatttcatttcctt 45889724  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctct 253  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  45889725 caaacatttctctcactaaaacataaagttctccctctctct 45889766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 30802438 - 30802533
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacattt 220  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  30802438 ataaacatttcacaaccatcagatctagtgtacacgtgtaataatcttaggcttctcaaactacaccaaatcaaacttcatttgcttcaaatattt 30802533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 37639384 - 37639457
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  37639384 ataaacacttcacaaccatcagatctagtgtacacgtgtaataattatagacttctcaaactacaccaaatcaa 37639457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 35198204 - 35198131
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||    
T  35198204 ataaacacttcacagccatcagatctagtgtacacgtgtaataatcctagacttttcaaactacacaaaatcaa 35198131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 16115880 - 16115966
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||| ||||||  ||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||| |||||||||||||||||    
T  16115880 ttatgcaccgtgcataaacacttcacaaccatcaaatctaatgtacacgtgtaataatccaagacttcttaaactacaccaaatcaa 16115966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 4e-69; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 18298147 - 18297960
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18298147 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgctt 18298048  T
Q  212 caaacatttatctcactaaaacataaagctctccctct--ctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||| | ||| ||||||||||||||||| ||||||||||  |||||||||| | |||||||||||||||||||||| ||||||||||||    
T  18298047 caagcgtttctctcactaaaacataaatctctccctctctctctacaatttagatgagtcttcatctcttccgaccacacatgatgat 18297960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 25192921 - 25193108
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  25192921 ttatgcaccgtgcataaacacttcacaaccattagatctagtgtacacgtgtaataattctaggcttctcaaattacaccaaatcaaacttcatttgctt 25193020  T
Q  212 caaacatttatctcactaaaacataaagctctcc--ctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||||| | |||||||||||||||||| | ||||||||||||    
T  25193021 caaacatttctctcactaaaacataaagctctccctctctctctacaattcatacgagtcttcatctcttccggccacacatgatgat 25193108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 20709803 - 20709950
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  20709803 ttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttctcaaactacaccaaatcaaacttcatttgctt 20709902  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctctacaatt 259  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  20709903 caaacatttctctcactaaaacataaagttctccctctctctacaatt 20709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 4281812 - 4281738
Alignment:
Q  124 tataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  4281812 tataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggtttctcaaactacagcaaatcaa 4281738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 211 - 297
Target Start/End: Complemental strand, 4579763 - 4579675
Alignment:
Q  211 tcaaacatttatctcactaaaacataaagctctccctctctct--acaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    |||||||||| ||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||| | ||||||||||||    
T  4579763 tcaaacatttctctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggccacacatgatgat 4579675  T

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Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 25995329 - 25995402
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  25995329 ataaatacttcacaaccatcagatttagtgtacacgtgtaataatcctaggctactcaaattacaccaaatcaa 25995402  T

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Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 14551342 - 14551288
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 179  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14551342 ataaacacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttc 14551288  T

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Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 4579841 - 4579787
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 179  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  4579841 ataaacactttacaaccatcagatctagtgtacacgtgtaataatcttatgcttc 4579787  T

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Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 43822409 - 43822469
Alignment:
Q  138 aaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 198  Q
    |||||||||||||||||||||||||| ||||||||||| |||| ||| ||||| |||||||    
T  43822409 aaccatcagatctagtgtacacgtgtgataatcctaggtttcttaaattacacaaaatcaa 43822469  T

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Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 5098759 - 5098809
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagg 175  Q
    ||||||||||||||||||||| || || |||||||||||||||||||||||    
T  5098759 ataaacacttcacaaccatcaaatttattgtacacgtgtaataatcctagg 5098809  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 36636960 - 36636912
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 173  Q
    |||||||||||||||||||||||| |  | |||||||||||||||||||    
T  36636960 ataaacacttcacaaccatcagatttgttttacacgtgtaataatccta 36636912  T

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Target: scaffold0097 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 13642 - 13789
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  13642 ttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttctcaaactacaccaaatcaaacttcatttgctt 13741  T
Q  212 caaacatttatctcactaaaacataaagctctccctctctctacaatt 259  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  13742 caaacatttctctcactaaaacataaagttctccctctctctacaatt 13789  T

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Target: scaffold0238 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 25268 - 25074
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgctt 211  Q
    |||| ||||||  |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||||    
T  25268 ttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtcataatcttaggtttctcaaactacaccaaatcaaacttcatttgctt 25169  T
Q  212 caaacatttatctcactaaa---------acataaagctctccctctctctacaattcaaatgagtcttcatctcttccgacaacacatgatgat 297  Q
    ||||||||| ||||||||||         |||||||||| ||||||||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  25168 caaacatttctctcactaaaaacataaagacataaagctttccctctctctacaattcagatgagtcttcatctcttccggccacacatgatgat 25074  T

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Target: scaffold0194 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 125 - 259
Target Start/End: Original strand, 27649 - 27785
Alignment:
Q  125 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatct 224  Q
    |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  27649 ataaacacttcacaactataagatctagtgtacacgtgtaataattctaggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctct 27748  T
Q  225 cactaaaacataaagctctccctc--tctctacaatt 259  Q
    |||||||||||||| |||||||||  |||||||||||    
T  27749 cactaaaacataaatctctccctctttctctacaatt 27785  T

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Target: scaffold0337 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 7042 - 7116
Alignment:
Q  108 atctttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 182  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7042 atctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctca 7116  T

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Target: scaffold0544 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 10711 - 10642
Alignment:
Q  112 ttatccaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctc 181  Q
    |||| ||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||| |||||    
T  10711 ttatacaccgtgcataaacacttcacaaccatcagatctagtgtgcatatgtaataatcctaggtttctc 10642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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