View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0674_low_44 (Length: 290)
Name: NF0674_low_44
Description: NF0674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0674_low_44 |
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Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 79 - 275
Target Start/End: Complemental strand, 31853241 - 31853045
Alignment:
| Q |
79 |
gaggatgaaaatccttatgtttttgaagacagagattttgaaaccaaaatagaaacagatgatggtagagttatggctctaaacatgtttgatcaaaaat |
178 |
Q |
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| T |
31853241 |
gaggatgaaaatccttatgtttttgaagacagagattttgaaaccaaaatagatacagatgatggtagagttatggctctaaacatgtttgatcaaaaat |
31853142 |
T |
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| Q |
179 |
caaagctgctcagaaactttgagaattatggtttgaccattttagaagctaaaggacatgcttttgtttcaccacaccactttgattctgaggttat |
275 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31853141 |
caaagctgcttagaaactttgagaattatggtttgaccattttagaagctaaaggacatgcttttgtttcaccacaccactttgattctgaggttat |
31853045 |
T |
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