View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0674_low_5 (Length: 502)
Name: NF0674_low_5
Description: NF0674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0674_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 431; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 1 - 473
Target Start/End: Complemental strand, 47117063 - 47116595
Alignment:
| Q |
1 |
tctccgcctatccatctacaaaacaagaaattaaaaataatcgttaaaaggtgatcgatcgagtcattgatacgttgatattgcttaccttgctttgtga |
100 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
47117063 |
tctccgcctatccatctacaaaacaagaaattaaaaataatcgttaaaaggtgatcga----gtcattgatacgttgatattgcttaccttgctttgtga |
47116968 |
T |
|
| Q |
101 |
tttgatcgttaaaaggtatgaatatttatctccttgaattgaaactaaagatataaaagaaattggttattgaatatctttgataaaatataactattgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47116967 |
tttgatcgttaaaaggtatgaatatttatctccttgaattgaaactaaagatataaaagaaattggttattgaatatctttgataaaatataactattgt |
47116868 |
T |
|
| Q |
201 |
aattacctgagaagcgatgaaacaaaacaatgtcagnnnnnnngagatatcataaggaaatgaaataacaagggtatgaggaagcttggagtggtgtcca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47116867 |
aattacctgagaagcgatgaaacaaaacaatgtcagaaaaaaagagatatcataaggaaatgaaataacaagggtatgaggaagcttggagtggtgtcca |
47116768 |
T |
|
| Q |
301 |
tctattgtggaaggattggggattcgttcattaacataacatcattgaatgagatgtatgacgtggaaattttctttgtaactgtctccccgaactttca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
47116767 |
tctattgtggaaggattggggattcgttcattaacataacatcattgaatgagatgtatgacgtggaacttttctttgtaactgtctccccgaactttca |
47116668 |
T |
|
| Q |
401 |
gtaattaataccacaattagcacaaataatttctttcattttctctttccttaccagttttccaccaaataat |
473 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47116667 |
gtaattaataccacaattagcacaaataatttctttcattttctctttccttaccagttttccaccaaataat |
47116595 |
T |
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