View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0674_low_53 (Length: 270)
Name: NF0674_low_53
Description: NF0674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0674_low_53 |
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Alignment Details
Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 49 - 237
Target Start/End: Original strand, 38298655 - 38298845
Alignment:
| Q |
49 |
acaaattatgtgaaaatttccccttttaagacattgt--tgtgcatatagttacggagaaaactaaagtaaagacttgaccttgagtttatccatagaga |
146 |
Q |
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| T |
38298655 |
acaaattatgtgaaagtttccccttttaagacattgtgttgtgcatatagttacggagaaaactaaagttaagacttgaccttgagtttatccatagaga |
38298754 |
T |
|
| Q |
147 |
aagcaggattgagtatccttctgcgcctaacccattccactccattgacaattgctaaaccttctcctatcatggttactatcgaaggcct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38298755 |
aagcaggattgagtatccttctgcgcctaacccattccactccattgacaattgctaaaccttctcctatcatggttactatcgaaggcct |
38298845 |
T |
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