View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0674_low_62 (Length: 250)
Name: NF0674_low_62
Description: NF0674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0674_low_62 |
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Alignment Details
Target: chr2 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 42870508 - 42870384
Alignment:
| Q |
16 |
acatcatctagtaagcacaccagttacccatagtttagcagatatttaagacgagaaagaacagaatccacaattagtaattggatttgagaatgcagca |
115 |
Q |
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| T |
42870508 |
acatcatatagtaagcacaccagttacccatagtttagcagatatttaagacaagaaagaacagaatccacaatcagtaatcggatttgagaatgcagca |
42870409 |
T |
|
| Q |
116 |
gattatgccgaattaaggaatctgt |
140 |
Q |
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||||||||||||||||||||||||| |
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| T |
42870408 |
gattatgccgaattaaggaatctgt |
42870384 |
T |
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