View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0675_low_1 (Length: 721)

Name: NF0675_low_1
Description: NF0675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0675_low_1
NF0675_low_1
[»] chr6 (10 HSPs)
chr6 (134-287)||(24950258-24950411)
chr6 (360-422)||(24950150-24950212)
chr6 (384-441)||(17369690-17369747)
chr6 (360-441)||(20770652-20770733)
chr6 (540-631)||(24949986-24950077)
chr6 (201-258)||(6921508-6921565)
chr6 (384-428)||(6921350-6921394)
chr6 (384-428)||(6947880-6947924)
chr6 (360-424)||(14749399-14749463)
chr6 (210-260)||(6943110-6943160)
[»] chr7 (33 HSPs)
chr7 (206-313)||(24385052-24385159)
chr7 (8-70)||(24383786-24383848)
chr7 (193-313)||(24391252-24391372)
chr7 (360-441)||(660834-660915)
chr7 (360-430)||(29454101-29454171)
chr7 (365-441)||(24385208-24385284)
chr7 (363-441)||(14076683-14076761)
chr7 (363-441)||(14386711-14386789)
chr7 (360-438)||(19344565-19344643)
chr7 (360-441)||(29430988-29431069)
chr7 (367-441)||(19357919-19357993)
chr7 (360-430)||(29921991-29922061)
chr7 (384-441)||(6864794-6864851)
chr7 (201-250)||(14076550-14076599)
chr7 (201-250)||(14386578-14386627)
chr7 (343-440)||(29859439-29859536)
chr7 (364-441)||(29874517-29874594)
chr7 (384-447)||(18514768-18514831)
chr7 (364-427)||(19604464-19604527)
chr7 (390-441)||(20058044-20058095)
chr7 (364-419)||(20414888-20414943)
chr7 (360-427)||(29106816-29106883)
chr7 (382-428)||(15571895-15571941)
chr7 (360-426)||(19722020-19722086)
chr7 (360-430)||(21210479-21210549)
chr7 (360-426)||(22028630-22028696)
chr7 (375-441)||(29881273-29881339)
chr7 (360-426)||(29899376-29899442)
chr7 (394-439)||(24002235-24002280)
chr7 (394-439)||(24010419-24010464)
chr7 (25-70)||(24391081-24391126)
chr7 (360-425)||(24391416-24391481)
chr7 (364-441)||(29867242-29867319)
[»] chr4 (8 HSPs)
chr4 (360-437)||(53774842-53774919)
chr4 (364-430)||(3565750-3565816)
chr4 (360-430)||(837778-837848)
chr4 (384-430)||(3557752-3557798)
chr4 (384-430)||(3560956-3561002)
chr4 (360-441)||(11970969-11971050)
chr4 (360-423)||(35767020-35767083)
chr4 (364-440)||(53790559-53790635)
[»] chr2 (7 HSPs)
chr2 (360-439)||(18908798-18908877)
chr2 (360-439)||(18913546-18913625)
chr2 (360-439)||(18920754-18920833)
chr2 (361-441)||(14514903-14514983)
chr2 (360-429)||(25377076-25377145)
chr2 (360-410)||(10205462-10205512)
chr2 (201-259)||(20712690-20712748)
[»] chr3 (1 HSPs)
chr3 (364-440)||(3625740-3625816)
[»] chr1 (6 HSPs)
chr1 (361-427)||(4014966-4015032)
chr1 (360-428)||(4570929-4570997)
chr1 (364-430)||(39379059-39379125)
chr1 (360-441)||(4366482-4366563)
chr1 (360-427)||(21855384-21855451)
chr1 (360-438)||(10218987-10219065)
[»] chr5 (3 HSPs)
chr5 (360-441)||(28763892-28763973)
chr5 (360-427)||(24330900-24330967)
chr5 (347-426)||(29597554-29597633)
[»] scaffold0097 (1 HSPs)
scaffold0097 (201-259)||(16529-16587)
[»] chr8 (1 HSPs)
chr8 (390-440)||(27618523-27618573)


Alignment Details
Target: chr6 (Bit Score: 78; Significance: 6e-36; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 134 - 287
Target Start/End: Complemental strand, 24950411 - 24950258
Alignment:
Q  134 aactattaactggttggtcattcgaaaggatattacatatgagtgtaataactatacccttgagaattttgcgatcatctcgcttgatttggggactgag 233  Q
    |||| |||| ||||||||||||||||| |||||||||||||| || |||||  ||||  |||||||||||||||||||||| ||||||| | |||| |||    
T  24950411 aactcttaattggttggtcattcgaaatgatattacatatgattggaataatcatactgttgagaattttgcgatcatctcacttgattcgaggacagag 24950312  T
Q  234 acatacacacaattgttgccccctcaaggttctggtgaaaagttgttggttgag 287  Q
    ||||||| ||||||||||||||||| |||||||  ||||  |||||||||||||    
T  24950311 acatacagacaattgttgccccctcgaggttctaatgaagggttgttggttgag 24950258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 360 - 422
Target Start/End: Complemental strand, 24950212 - 24950150
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaatt 422  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24950212 tttgttatatggaagatgatgaagtttggagttgaggagtcttggagtcaattccttaaaatt 24950150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 17369690 - 17369747
Alignment:
Q  384 tttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    ||||| |||||||| ||||||| |||||| ||||||||||||||||||| ||||||||    
T  17369690 tttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttcaaa 17369747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 20770652 - 20770733
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    |||||||||||| | |||| | | |||||  |||||||||| |||| |||||||||||||||||||||||| | ||||||||    
T  20770652 tttgttatatggcaaatgaaggaatttggaattgaagagtcatggattcaattccttaaaattagttatcataatcttcaaa 20770733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 540 - 631
Target Start/End: Complemental strand, 24950077 - 24949986
Alignment:
Q  540 aattgcagaactaatatggtggtgcaaactgcatttactgtaggaaaaaattggttctattttgatcattatgttgaaagtatggtttcgac 631  Q
    ||||| ||||||||||||||||||| || || |  ||| ||||||||||  ||| |||||||  || |||||||||||||| ||||||||||    
T  24950077 aattggagaactaatatggtggtgccaaatgtaactacggtaggaaaaagatgggtctatttcaataattatgttgaaagtttggtttcgac 24949986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 6921565 - 6921508
Alignment:
Q  201 tttgcgatcatctcgcttgatttggggactgagacatacacacaattgttgccccctc 258  Q
    |||| ||| ||||| |||||||||||||| |||||||| ||||||||||||| |||||    
T  6921565 tttgtgatgatctcacttgatttggggacagagacatatacacaattgttgctccctc 6921508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 6921394 - 6921350
Alignment:
Q  384 tttggtgttgaagagtcttggagtcaattccttaaaattagttat 428  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||    
T  6921394 tttggagttgaagaatcttggactcaattccttaaaattagttat 6921350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 6947924 - 6947880
Alignment:
Q  384 tttggtgttgaagagtcttggagtcaattccttaaaattagttat 428  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||    
T  6947924 tttggagttgaagaatcttggactcaattccttaaaattagttat 6947880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 424
Target Start/End: Original strand, 14749399 - 14749463
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattag 424  Q
    |||||| |||||| ||||||| | ||||| ||| |||||||||||| ||||||||| ||||||||    
T  14749399 tttgttttatggaggatgatggaatttggagttcaagagtcttggactcaattcctcaaaattag 14749463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 210 - 260
Target Start/End: Complemental strand, 6943160 - 6943110
Alignment:
Q  210 atctcgcttgatttggggactgagacatacacacaattgttgccccctcaa 260  Q
    ||||| |||||||||||||| |||||||| ||| ||||||||| |||||||    
T  6943160 atctcacttgatttggggacagagacatatacaaaattgttgctccctcaa 6943110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 24385052 - 24385159
Alignment:
Q  206 gatcatctcgcttgatttggggactgagacatacacacaattgttgccccctcaaggttctggtgaaaagttgttggttgagccaactatttgtgtgctt 305  Q
    ||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||||||||| ||||  |||||||  |||  ||| | |||||||||||    
T  24385052 gatcatctcacttaatttggggacagagaaatacacacaattgttgccccctcaaggttctgatgaagtgttgttgaatgaaacaagtctttgtgtgctt 24385151  T
Q  306 atgaattg 313  Q
    ||| ||||    
T  24385152 atggattg 24385159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 24383786 - 24383848
Alignment:
Q  8 gagcagagatgcaaggatttttagtttgggtgataatatatggagaagtgttccaagttttcc 70  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  24383786 gagcagagatgcaaggatttttagtttgggtgataatatttggaaaagtattccaagttttcc 24383848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 193 - 313
Target Start/End: Original strand, 24391252 - 24391372
Alignment:
Q  193 ttgagaattttgcgatcatctcgcttgatttggggactgagacatacacacaattgttgccccctcaaggttctggtgaaaagttgttggttgagccaac 292  Q
    ||||| ||| |||||||||||| |||||||||||||  |||||||||||||||||||||||||||  || |||  |||||  |||||||  |||| ||||    
T  24391252 ttgagcattatgcgatcatctcacttgatttggggatagagacatacacacaattgttgccccctagagattcccgtgaagtgttgttgaatgagtcaac 24391351  T
Q  293 tatttgtgtgcttatgaattg 313  Q
     ||||||||||| ||| ||||    
T  24391352 catttgtgtgctcatggattg 24391372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 660915 - 660834
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    |||||||||||| |||||| | | ||| | |||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  660915 tttgttatatggcagatgaaggaatttcgagttgaagagtcttggactcaattccttaaaattagttatcataatcttcaaa 660834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 29454171 - 29454101
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatca 430  Q
    ||||||||||||  ||||||||| ||||| |||||||| ||||||| ||||||| ||||||||||||||||    
T  29454171 tttgttatatggcggatgatgaaatttggagttgaagattcttggactcaattctttaaaattagttatca 29454101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 365 - 441
Target Start/End: Original strand, 24385208 - 24385284
Alignment:
Q  365 tatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    |||||||||||||| ||| ||||| |||||| |||||||||||| ||| |||||||||||| |||| | ||||||||    
T  24385208 tatatggaagatgaagaactttggagttgaaaagtcttggagtcgatttcttaaaattagtcatcataatcttcaaa 24385284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 14076683 - 14076761
Alignment:
Q  363 gttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    ||||||||| | |||| | | ||||| |||||||| ||||||| |||||| ||||||||||||||||||| ||||||||    
T  14076683 gttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttcaaa 14076761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 14386711 - 14386789
Alignment:
Q  363 gttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    ||||||||| | |||| | | ||||| |||||||| ||||||| |||||| ||||||||||||||||||| ||||||||    
T  14386711 gttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttcaaa 14386789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 19344643 - 19344565
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttc 438  Q
    |||||||||||| |||||||| | ||||| |||||| | ||||||| |||||| ||||||||||||| ||||| |||||    
T  19344643 tttgttatatggcagatgatggaatttggagttgaacaatcttggactcaatttcttaaaattagttttcagaatcttc 19344565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 29431069 - 29430988
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    ||||||||||||  ||||||||| ||||| | | |||| |||||||  ||||||||||||||||||||||||  ||||||||    
T  29431069 tttgttatatggcggatgatgaaatttggggctaaagattcttggacccaattccttaaaattagttatcaggatcttcaaa 29430988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 367 - 441
Target Start/End: Original strand, 19357919 - 19357993
Alignment:
Q  367 tatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    |||||||||||||| | ||||| ||| |||||||||||| ||||||| | |||||||||| ||||  ||||||||    
T  19357919 tatggaagatgatggaatttggagttcaagagtcttggactcaattcttaaaaattagttttcaggatcttcaaa 19357993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 29922061 - 29921991
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatca 430  Q
    |||||||||||| |||||| ||| ||||| | |||||| ||||||  ||||||||||| ||||||||||||    
T  29922061 tttgttatatggcagatgaagaaatttggggatgaagattcttggtctcaattccttagaattagttatca 29921991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 6864851 - 6864794
Alignment:
Q  384 tttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    ||||| |||||||||||||||| ||| |||||||||| ||||||||| | ||||||||    
T  6864851 tttggagttgaagagtcttggactcagttccttaaaactagttatcataatcttcaaa 6864794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 14076550 - 14076599
Alignment:
Q  201 tttgcgatcatctcgcttgatttggggactgagacatacacacaattgtt 250  Q
    |||| ||| ||||| ||||||||||||||||||||||| |||||||||||    
T  14076550 tttgtgattatctcacttgatttggggactgagacatatacacaattgtt 14076599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 14386578 - 14386627
Alignment:
Q  201 tttgcgatcatctcgcttgatttggggactgagacatacacacaattgtt 250  Q
    |||| ||| ||||| ||||||||||||||||||||||| |||||||||||    
T  14386578 tttgtgattatctcacttgatttggggactgagacatatacacaattgtt 14386627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 440
Target Start/End: Original strand, 29859439 - 29859536
Alignment:
Q  343 gttacaaggaagatcagtttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaa 440  Q
    |||||||||||  | | || ||||||||| |||||| ||| ||||| |||||||| |||||||  | ||| ||||||||||||||||| | |||||||    
T  29859439 gttacaaggaaattgatttcgttatatgggagatgaagaaatttggagttgaagattcttggaccccatttcttaaaattagttatcacaatcttcaa 29859536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 441
Target Start/End: Original strand, 29874517 - 29874594
Alignment:
Q  364 ttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    |||||||| | |||| ||| ||||| |||||||| ||||||| || ||| ||||||||||||||||| | ||||||||    
T  29874517 ttatatggcaaatgaagaaatttggggttgaagattcttggactccattacttaaaattagttatcaaaatcttcaaa 29874594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 447
Target Start/End: Complemental strand, 18514831 - 18514768
Alignment:
Q  384 tttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaagaaatt 447  Q
    ||||| |||||| | ||||||| ||||||||||||||||||||||  || |||||||| |||||    
T  18514831 tttggagttgaaaactcttggactcaattccttaaaattagttatatgaatcttcaaataaatt 18514768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 19604527 - 19604464
Alignment:
Q  364 ttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagtta 427  Q
    |||||||| |||||| | | ||||| |||||||| || |||| |||||||||||||||||||||    
T  19604527 ttatatggcagatgaaggaatttggagttgaagactcctggactcaattccttaaaattagtta 19604464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 441
Target Start/End: Complemental strand, 20058095 - 20058044
Alignment:
Q  390 gttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    ||||||||||||||| ||||||| ||||||||||||||| | | ||||||||    
T  20058095 gttgaagagtcttggtgtcaatttcttaaaattagttatgaaaatcttcaaa 20058044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 419
Target Start/End: Original strand, 20414888 - 20414943
Alignment:
Q  364 ttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaa 419  Q
    ||||||||||||||||||| ||||| | |||  ||||||||| |||||||||||||    
T  20414888 ttatatggaagatgatgaaatttggagatgacaagtcttggactcaattccttaaa 20414943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 29106816 - 29106883
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagtta 427  Q
    |||||| ||||| |||||| ||| ||||| |||||||||||||||| |||| |  |||||||||||||    
T  29106816 tttgttgtatggcagatgaagaaatttggggttgaagagtcttggactcaactttttaaaattagtta 29106883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 15571941 - 15571895
Alignment:
Q  382 agtttggtgttgaagagtcttggagtcaattccttaaaattagttat 428  Q
    ||||||| |||||||||||||||  |||||||| |||||||||||||    
T  15571941 agtttggagttgaagagtcttgggttcaattccataaaattagttat 15571895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 19722020 - 19722086
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagtt 426  Q
    |||||| |||||||||||||| | ||||| ||| |||| ||||||| ||||||||| ||||| ||||    
T  19722020 tttgttttatggaagatgatggaatttggagttcaagattcttggactcaattcctcaaaatcagtt 19722086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 21210549 - 21210479
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatca 430  Q
    |||||||||||||||||||  |||||||| | |||  ||||||||| || |||||||||| |||| |||||    
T  21210549 tttgttatatggaagatgacaaagtttggagatgacaagtcttggactctattccttaaatttagctatca 21210479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 22028630 - 22028696
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagtt 426  Q
    |||||||||||||| |||| | | | ||| |||||||||||||||| |||||| ||||| |||||||    
T  22028630 tttgttatatggaaaatgacggattatggagttgaagagtcttggactcaattacttaagattagtt 22028696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 441
Target Start/End: Original strand, 29881273 - 29881339
Alignment:
Q  375 atgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    |||| ||| ||||| |||||||| ||||||| ||||||||||| ||||||||| || | ||||||||    
T  29881273 atgaagaaatttggggttgaagattcttggactcaattccttagaattagttaccatagtcttcaaa 29881339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 29899376 - 29899442
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagtt 426  Q
    |||||||||||| |||||| ||| ||||| ||||||||||| |||| ||||||  | ||||||||||    
T  29899376 tttgttatatggcagatgaagaaatttggggttgaagagtcctggactcaatttttaaaaattagtt 29899442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 439
Target Start/End: Original strand, 24002235 - 24002280
Alignment:
Q  394 aagagtcttggagtcaattccttaaaattagttatcagactcttca 439  Q
    |||||||||||| |||||| ||||| ||||||||||||| ||||||    
T  24002235 aagagtcttggactcaattacttaagattagttatcagaatcttca 24002280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 439
Target Start/End: Original strand, 24010419 - 24010464
Alignment:
Q  394 aagagtcttggagtcaattccttaaaattagttatcagactcttca 439  Q
    |||||||||||| |||||| ||||| ||||||||||||| ||||||    
T  24010419 aagagtcttggactcaattacttaagattagttatcagaatcttca 24010464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 24391081 - 24391126
Alignment:
Q  25 tttttagtttgggtgataatatatggagaagtgttccaagttttcc 70  Q
    |||||||||||||||||||||| ||||||| | ||| |||||||||    
T  24391081 tttttagtttgggtgataatatttggagaaatattcaaagttttcc 24391126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 24391416 - 24391481
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagt 425  Q
    |||||| |||||||||||| ||| ||||| |||||| | | |||||||||||| ||||| ||||||    
T  24391416 tttgttttatggaagatgaagaactttggagttgaaaaatgttggagtcaatttcttaacattagt 24391481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 441
Target Start/End: Original strand, 29867242 - 29867319
Alignment:
Q  364 ttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    |||||||| | |||| ||| || || |||||||| ||||||| ||||||||||| ||||||||| || | ||||||||    
T  29867242 ttatatggcaaatgaagaaattcggggttgaagattcttggactcaattccttagaattagttaccataatcttcaaa 29867319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 7e-17; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 53774842 - 53774919
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactctt 437  Q
    |||||||||||| | |||| | | ||||| |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  53774842 tttgttatatggcaaatgaaggaatttggagttgaagagtcttggactcaattccttaaaattagttatcagaatctt 53774919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 364 - 430
Target Start/End: Original strand, 3565750 - 3565816
Alignment:
Q  364 ttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatca 430  Q
    |||||||| |||||| | | ||||| |||||||||||||||| |||||| |||||||||||||||||    
T  3565750 ttatatggcagatgaaggaatttggggttgaagagtcttggactcaatttcttaaaattagttatca 3565816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 430
Target Start/End: Original strand, 837778 - 837848
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatca 430  Q
    |||||||||||| | |||| ||| ||||||||| |||||||||||| ||||||  |||||||||| |||||    
T  837778 tttgttatatggcaaatgaagaattttggtgttcaagagtcttggattcaattatttaaaattagctatca 837848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 3557752 - 3557798
Alignment:
Q  384 tttggtgttgaagagtcttggagtcaattccttaaaattagttatca 430  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||    
T  3557752 tttggggttgaagagtcttggactcaatttcttaaaattagttatca 3557798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 3561002 - 3560956
Alignment:
Q  384 tttggtgttgaagagtcttggagtcaattccttaaaattagttatca 430  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||    
T  3561002 tttggggttgaagagtcttggactcaatttcttaaaattagttatca 3560956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 11971050 - 11970969
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    |||||||||||| | |||| | | ||||| || ||||||||||||| |||||| |||| |||||||||||| | ||||||||    
T  11971050 tttgttatatggcaaatgaaggaatttggagtggaagagtcttggactcaatttcttagaattagttatcataatcttcaaa 11970969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 35767020 - 35767083
Alignment:
Q  360 tttgttatatggaagatg-atgaagtttggtgttgaagagtcttggagtcaattccttaaaatta 423  Q
    |||||||||||||||||| | ||| ||||| |||||||||||||||| |||| ||||||||||||    
T  35767020 tttgttatatggaagatggaagaa-tttggagttgaagagtcttggattcaactccttaaaatta 35767083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 440
Target Start/End: Original strand, 53790559 - 53790635
Alignment:
Q  364 ttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaa 440  Q
    |||||||||||||||  || |||||  ||||| | ||||||| |||||| ||||||||||||| ||||| |||||||    
T  53790559 ttatatggaagatgacaaaatttggatttgaacaatcttggactcaatttcttaaaattagttttcagaatcttcaa 53790635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 18908877 - 18908798
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttca 439  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||||| ||||||||| |||||||||| ||| | ||||||    
T  18908877 tttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagttttcaaaatcttca 18908798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 18913625 - 18913546
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttca 439  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||||| ||||||||| |||||||||| ||| | ||||||    
T  18913625 tttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagttttcaaaatcttca 18913546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 18920833 - 18920754
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttca 439  Q
    ||||||||||||||||||||| | ||||| ||| |||||||||||| ||||||||| |||||||||| ||| | ||||||    
T  18920833 tttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagttttcaaaatcttca 18920754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 361 - 441
Target Start/End: Original strand, 14514903 - 14514983
Alignment:
Q  361 ttgttatatggaagatg-atgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    ||||||||||||| ||| ||||| ||||| |||||||| ||||||| ||||||||||||||||||||||  || ||||||||    
T  14514903 ttgttatatggaaaatggatgaa-tttggagttgaagattcttggactcaattccttaaaattagttatatgaatcttcaaa 14514983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 429
Target Start/End: Original strand, 25377076 - 25377145
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatc 429  Q
    ||||||||||||| ||||| | | ||||| ||| |||||||||||| ||||||  |||||||||||||||    
T  25377076 tttgttatatggatgatgaaggattttggagttcaagagtcttggattcaattatttaaaattagttatc 25377145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 10205512 - 10205462
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaa 410  Q
    |||||||||||||||||||   ||| |||||||||||||||||||| ||||    
T  10205512 tttgttatatggaagatgactgagtatggtgttgaagagtcttggactcaa 10205462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 20712748 - 20712690
Alignment:
Q  201 tttgcgatcatctcgcttgatttggggactgagacatacacacaattgttgccccctca 259  Q
    |||| ||||||||| || ||||||||||  ||||||||||||||| |||||| ||||||    
T  20712748 tttgtgatcatctccctcgatttggggatggagacatacacacaaatgttgctccctca 20712690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 440
Target Start/End: Original strand, 3625740 - 3625816
Alignment:
Q  364 ttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaa 440  Q
    |||||||| | |||| ||| ||||| |||||||||||||||| |||||| ||||||||||||||||| | |||||||    
T  3625740 ttatatggcaaatgaagaaatttggggttgaagagtcttggactcaatttcttaaaattagttatcaaaatcttcaa 3625816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 4015032 - 4014966
Alignment:
Q  361 ttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagtta 427  Q
    ||||||||||| |||||| ||| ||||| |||||||| ||||||| ||||||||||||| |||||||    
T  4015032 ttgttatatggcagatgaagaaatttggggttgaagattcttggactcaattccttaaagttagtta 4014966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 4570929 - 4570997
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttat 428  Q
    |||||||||||| | |||| ||| ||||| |||||||| ||||||| |||||| |||||||||||||||    
T  4570929 tttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 4570997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 39379125 - 39379059
Alignment:
Q  364 ttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatca 430  Q
    |||||||| |||||| | | ||||| |||||||||||||||| |||||| |||||||| ||||||||    
T  39379125 ttatatggcagatgaaggaatttggggttgaagagtcttggactcaatttcttaaaatcagttatca 39379059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 4366563 - 4366482
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    |||||| ||||| |||||| ||| || || |||||||||||||||| || ||| |||||| ||||||| |||| ||||||||    
T  4366563 tttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaa 4366482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 21855451 - 21855384
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagtta 427  Q
    |||||||||||| |||||| | | ||||| |||||||| ||||||| |||| |||||||| |||||||    
T  21855451 tttgttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagtta 21855384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 10218987 - 10219065
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttc 438  Q
    |||||| ||||| | |||| ||| |||||  ||||||| ||||||| |||||| |||||||||||||| || |||||||    
T  10218987 tttgttgtatggcaaatgaagaaatttgggattgaagattcttggactcaattacttaaaattagttaccatactcttc 10219065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 28763973 - 28763892
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaaa 441  Q
    ||||||||||||||||||| | | ||||| |||||| |||||||||||| |||||| ||||| || ||||||  ||||||||    
T  28763973 tttgttatatggaagatgacgcaatttggagttgaaaagtcttggagtcgattcctcaaaatcagctatcaggatcttcaaa 28763892  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 24330967 - 24330900
Alignment:
Q  360 tttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagtta 427  Q
    |||||||||||| |||||| | | ||||| |||||||| ||||||| |||| |||||||| |||||||    
T  24330967 tttgttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagtta 24330900  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 426
Target Start/End: Complemental strand, 29597633 - 29597554
Alignment:
Q  347 caaggaagatcagtttgttatatggaagatgatgaagtttggtgttgaagagtcttggagtcaattccttaaaattagtt 426  Q
    |||||||  ||| |||||||||||| | |||||  | ||||| |||||| | ||||||| ||||||||||||||||||||    
T  29597633 caaggaaactcattttgttatatggcaaatgattgaatttggagttgaacaatcttggactcaattccttaaaattagtt 29597554  T

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Target: scaffold0097 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 16587 - 16529
Alignment:
Q  201 tttgcgatcatctcgcttgatttggggactgagacatacacacaattgttgccccctca 259  Q
    |||| ||||||||| || ||||||||||  ||||||||||||||| |||||| ||||||    
T  16587 tttgtgatcatctccctcgatttggggatggagacatacacacaaatgttgctccctca 16529  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 440
Target Start/End: Original strand, 27618523 - 27618573
Alignment:
Q  390 gttgaagagtcttggagtcaattccttaaaattagttatcagactcttcaa 440  Q
    |||||||||||||||| ||| || |||||| |||||||||||| |||||||    
T  27618523 gttgaagagtcttggactcagttgcttaaagttagttatcagaatcttcaa 27618573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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