View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0676_low_24 (Length: 319)
Name: NF0676_low_24
Description: NF0676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0676_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 101 - 247
Target Start/End: Original strand, 27495816 - 27495962
Alignment:
| Q |
101 |
gttatgttgtgtttgtgcactcatcagacaaaggtggccgttttctttagcttctatatcactcactcactttctcacacaaaacactaatataatcaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
27495816 |
gttatgttgtgtttgtgcactcatcagacaaaggtggccgttttctttagcttctatatcactcactcactttctcacacaaaacactaaaataatcaaa |
27495915 |
T |
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| Q |
201 |
gatttcttcatcatacaagttctaccttttctcctttcttttctctc |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27495916 |
gatttcttcatcatacaagttctaccttttctcctttcttttctctc |
27495962 |
T |
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