View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0676_low_27 (Length: 296)

Name: NF0676_low_27
Description: NF0676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0676_low_27
NF0676_low_27
[»] chr6 (10 HSPs)
chr6 (64-249)||(15462312-15462497)
chr6 (67-246)||(20010625-20010804)
chr6 (70-246)||(21567114-21567290)
chr6 (70-246)||(14377039-14377215)
chr6 (70-246)||(18797672-18797848)
chr6 (76-245)||(21474588-21474757)
chr6 (64-200)||(10466017-10466153)
chr6 (76-246)||(19437990-19438160)
chr6 (72-146)||(24367384-24367458)
chr6 (116-200)||(16813668-16813752)
[»] scaffold0034 (1 HSPs)
scaffold0034 (64-246)||(70513-70695)
[»] chr4 (12 HSPs)
chr4 (64-246)||(27903497-27903679)
chr4 (64-200)||(20893143-20893279)
chr4 (72-245)||(51603771-51603944)
chr4 (72-245)||(53750449-53750622)
chr4 (73-246)||(16150757-16150930)
chr4 (73-246)||(16154903-16155076)
chr4 (64-246)||(7357379-7357561)
chr4 (64-113)||(11204343-11204392)
chr4 (72-200)||(44658890-44659018)
chr4 (76-143)||(14993448-14993515)
chr4 (72-247)||(29450514-29450689)
chr4 (72-113)||(3261905-3261946)
[»] chr3 (20 HSPs)
chr3 (64-246)||(10417251-10417433)
chr3 (64-245)||(16831735-16831916)
chr3 (76-247)||(35982934-35983105)
chr3 (64-246)||(17189115-17189297)
chr3 (72-245)||(8744597-8744770)
chr3 (64-248)||(16326913-16327097)
chr3 (97-245)||(16384579-16384727)
chr3 (70-246)||(24190051-24190227)
chr3 (76-246)||(31941656-31941826)
chr3 (72-245)||(13944773-13944946)
chr3 (162-246)||(13317775-13317859)
chr3 (76-200)||(31692437-31692561)
chr3 (64-122)||(13317864-13317922)
chr3 (73-176)||(2247130-2247233)
chr3 (76-200)||(14290784-14290908)
chr3 (116-200)||(15008833-15008917)
chr3 (64-102)||(16378284-16378322)
chr3 (72-113)||(10408717-10408758)
chr3 (76-137)||(16825594-16825655)
chr3 (72-113)||(28757068-28757109)
[»] scaffold0029 (2 HSPs)
scaffold0029 (64-246)||(93875-94057)
scaffold0029 (115-246)||(115754-115885)
[»] chr5 (9 HSPs)
chr5 (64-246)||(20824479-20824661)
chr5 (67-246)||(22464979-22465158)
chr5 (64-246)||(28892102-28892284)
chr5 (64-246)||(20778939-20779121)
chr5 (64-200)||(25851098-25851234)
chr5 (64-156)||(22505705-22505797)
chr5 (64-122)||(20345308-20345366)
chr5 (76-248)||(23563326-23563498)
chr5 (79-245)||(17266495-17266661)
[»] scaffold0605 (1 HSPs)
scaffold0605 (67-246)||(1424-1603)
[»] chr1 (8 HSPs)
chr1 (67-246)||(20853810-20853989)
chr1 (64-200)||(21961185-21961321)
chr1 (76-247)||(21742601-21742772)
chr1 (64-246)||(52988899-52989081)
chr1 (64-246)||(20074759-20074941)
chr1 (76-248)||(22015793-22015965)
chr1 (72-113)||(48426039-48426080)
chr1 (64-200)||(24096711-24096847)
[»] scaffold0010 (1 HSPs)
scaffold0010 (112-246)||(180820-180954)
[»] scaffold0067 (4 HSPs)
scaffold0067 (64-245)||(49162-49343)
scaffold0067 (64-245)||(58196-58377)
scaffold0067 (64-245)||(64584-64765)
scaffold0067 (73-143)||(29774-29844)
[»] chr7 (18 HSPs)
chr7 (64-246)||(11385394-11385576)
chr7 (64-205)||(14140781-14140922)
chr7 (76-203)||(19150125-19150252)
chr7 (76-203)||(20749524-20749651)
chr7 (64-246)||(21755514-21755696)
chr7 (72-245)||(18050919-18051092)
chr7 (64-245)||(14283340-14283521)
chr7 (71-203)||(14261254-14261386)
chr7 (64-200)||(13965679-13965815)
chr7 (73-182)||(15114312-15114421)
chr7 (64-200)||(12459730-12459866)
chr7 (76-200)||(13676565-13676689)
chr7 (73-191)||(15099623-15099741)
chr7 (72-113)||(26091896-26091937)
chr7 (76-113)||(26115688-26115725)
chr7 (72-113)||(40924915-40924956)
chr7 (72-113)||(49155411-49155452)
chr7 (64-104)||(15343533-15343573)
[»] scaffold0765 (1 HSPs)
scaffold0765 (64-245)||(6239-6420)
[»] chr8 (8 HSPs)
chr8 (64-245)||(22054041-22054222)
chr8 (84-247)||(21928626-21928789)
chr8 (64-246)||(16268645-16268827)
chr8 (72-245)||(19985366-19985539)
chr8 (64-159)||(22027788-22027883)
chr8 (79-200)||(22374062-22374183)
chr8 (73-200)||(6606936-6607063)
chr8 (73-197)||(20391273-20391397)
[»] chr2 (7 HSPs)
chr2 (64-176)||(23097606-23097718)
chr2 (70-246)||(19716535-19716711)
chr2 (70-246)||(19721098-19721274)
chr2 (72-245)||(12577104-12577277)
chr2 (80-200)||(23274352-23274472)
chr2 (72-113)||(20848340-20848381)
chr2 (115-159)||(22733379-22733423)
[»] scaffold0165 (1 HSPs)
scaffold0165 (76-247)||(12113-12284)
[»] scaffold0046 (1 HSPs)
scaffold0046 (76-247)||(70261-70432)
[»] scaffold0335 (1 HSPs)
scaffold0335 (73-247)||(4284-4458)
[»] scaffold0053 (1 HSPs)
scaffold0053 (64-246)||(65279-65461)
[»] scaffold0004 (1 HSPs)
scaffold0004 (76-191)||(325860-325975)
[»] scaffold0239 (1 HSPs)
scaffold0239 (63-245)||(9769-9951)
[»] scaffold0203 (1 HSPs)
scaffold0203 (80-246)||(835-1001)
[»] scaffold0222 (1 HSPs)
scaffold0222 (64-245)||(469-650)
[»] scaffold0076 (1 HSPs)
scaffold0076 (64-245)||(53405-53586)
[»] scaffold0005 (1 HSPs)
scaffold0005 (64-245)||(263367-263548)
[»] scaffold0003 (1 HSPs)
scaffold0003 (64-245)||(203522-203703)
[»] scaffold0476 (1 HSPs)
scaffold0476 (64-176)||(596-708)
[»] scaffold1299 (1 HSPs)
scaffold1299 (72-246)||(1829-2003)
[»] scaffold0118 (1 HSPs)
scaffold0118 (64-246)||(602-784)
[»] scaffold0114 (1 HSPs)
scaffold0114 (64-246)||(40199-40381)
[»] scaffold0405 (1 HSPs)
scaffold0405 (115-247)||(5794-5926)
[»] scaffold0235 (2 HSPs)
scaffold0235 (70-245)||(8444-8619)
scaffold0235 (70-245)||(18658-18833)
[»] scaffold0020 (1 HSPs)
scaffold0020 (79-246)||(98564-98731)
[»] scaffold0001 (1 HSPs)
scaffold0001 (64-156)||(514424-514516)
[»] scaffold0243 (1 HSPs)
scaffold0243 (76-191)||(9808-9923)
[»] scaffold0074 (1 HSPs)
scaffold0074 (126-200)||(15275-15349)
[»] scaffold2165 (1 HSPs)
scaffold2165 (64-200)||(830-966)
[»] scaffold1426 (1 HSPs)
scaffold1426 (64-156)||(1678-1770)
[»] scaffold0420 (1 HSPs)
scaffold0420 (70-246)||(8761-8937)
[»] scaffold0146 (1 HSPs)
scaffold0146 (76-200)||(311-435)
[»] scaffold0266 (1 HSPs)
scaffold0266 (80-247)||(16794-16961)
[»] scaffold0108 (1 HSPs)
scaffold0108 (76-247)||(50258-50429)
[»] scaffold0348 (2 HSPs)
scaffold0348 (64-246)||(4830-5012)
scaffold0348 (64-158)||(17553-17647)
[»] scaffold0088 (1 HSPs)
scaffold0088 (64-122)||(30075-30133)
[»] scaffold0058 (1 HSPs)
scaffold0058 (64-194)||(22263-22393)
[»] scaffold1517 (1 HSPs)
scaffold1517 (64-200)||(1514-1650)
[»] scaffold0317 (1 HSPs)
scaffold0317 (76-200)||(2784-2908)
[»] scaffold0104 (1 HSPs)
scaffold0104 (76-200)||(43446-43570)
[»] scaffold0056 (1 HSPs)
scaffold0056 (76-200)||(910-1034)
[»] scaffold0026 (1 HSPs)
scaffold0026 (74-170)||(51802-51898)
[»] scaffold2062 (1 HSPs)
scaffold2062 (76-143)||(961-1028)
[»] scaffold0679 (1 HSPs)
scaffold0679 (77-176)||(1074-1173)
[»] scaffold0523 (2 HSPs)
scaffold0523 (76-247)||(5593-5764)
scaffold0523 (68-113)||(11857-11902)
[»] scaffold0068 (1 HSPs)
scaffold0068 (64-122)||(67213-67271)
[»] scaffold0509 (1 HSPs)
scaffold0509 (73-197)||(11978-12102)
[»] scaffold0310 (1 HSPs)
scaffold0310 (71-200)||(11125-11254)
[»] scaffold0041 (1 HSPs)
scaffold0041 (72-113)||(41884-41925)
[»] scaffold0848 (1 HSPs)
scaffold0848 (74-146)||(5080-5152)
[»] scaffold0309 (1 HSPs)
scaffold0309 (76-200)||(12880-13004)
[»] scaffold0156 (1 HSPs)
scaffold0156 (76-200)||(37092-37216)
[»] scaffold0106 (1 HSPs)
scaffold0106 (76-176)||(34490-34590)


Alignment Details
Target: chr6 (Bit Score: 158; Significance: 4e-84; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 64 - 249
Target Start/End: Original strand, 15462312 - 15462497
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  15462312 tcattggtagtctgcgtaccagtcaaggcaaatacttttcctccagttctgaccttcttaggttgcgtgcactgcgaactaatgtggccctcctcaccac 15462411  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctctg 249  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15462412 agttataacacacgatatctccccgcttgcactcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctctg 15462497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 67 - 246
Target Start/End: Complemental strand, 20010804 - 20010625
Alignment:
Q  67 ttggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagt 166  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| || |||||||||||||| || ||||| |    
T  20010804 ttggtagtctgagtaccagtcaaagcgaataccttccctccagttctgaccttcttaggttgcatgcactgcgagctaatgtggccctcatcgccacaat 20010705  T
Q  167 tataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  20010704 tgaaacaaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatct 20010625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 246
Target Start/End: Complemental strand, 21567290 - 21567114
Alignment:
Q  70 gtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttat 169  Q
    |||||||||||||||||||||||||| || ||||| || ||||| | |||||| || || |||||||| ||||| ||||||||||| | | |||| ||||    
T  21567290 gtagtctgcgtaccagtcaaagcaaacacttttccaccggttctaatcttctttggctgagtgcactgggaactgatgtggccctccttatcacaattat 21567191  T
Q  170 aacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||||| | ||| || | |||||| | ||||||    || ||||||||||| || ||||| || ||||||||||||    
T  21567190 aacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcatct 21567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 246
Target Start/End: Complemental strand, 14377215 - 14377039
Alignment:
Q  70 gtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttat 169  Q
    |||||||||||||||||||| ||||| || ||||| || ||||| |||||||| || || || || || ||||| |||||||||||||||   |||||||    
T  14377215 gtagtctgcgtaccagtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtacattgcgaactgatgtggccctcttcattgcagttat 14377116  T
Q  170 aacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||||| | ||| |||||||| || | ||| ||    || ||||||||||| || ||||| || ||||||||||||    
T  14377115 aacaaacaacatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatct 14377039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 246
Target Start/End: Original strand, 18797672 - 18797848
Alignment:
Q  70 gtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttat 169  Q
    |||||||||||||||||||| ||||| || || || || ||||| |||||||| ||||| |||||||||||||| || ||||| || |||   |||||||    
T  18797672 gtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttctttggttgagtgcactgtgaactgatatggccttcatcattgcagttat 18797771  T
Q  170 aacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    | ||||| |  || ||||||||||| ||||| |     || || |||||||| || ||||||||||||| |||||||    
T  18797772 agcaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctcatct 18797848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 245
Target Start/End: Original strand, 21474588 - 21474757
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctga-ccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaa 174  Q
    |||||||||||||||||||| ||||| || || || | || |||||||||||| | ||||||| |||||||| || ||||||||| |||| || || ||     
T  21474588 tgcgtaccagtcaaagcaaacaccttgccacctgt-cagagccttcttaggtttcctgcactgagaactaatatgaccctcttcatcacaattgtagcac 21474686  T
Q  175 acgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || ||||| ||||||||||| ||||||||    || |||||||  || |||| |||||| |||||||||||    
T  21474687 acaatatcaccacgcttgcactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcatc 21474757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 10466153 - 10466017
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||||||||||||||||||  ||||  |||| || || ||||| || ||||||||||| || || || |||||||||||||| || || ||||||   |    
T  10466153 tcattggtagtctgcgtaccgatcaatacaaacactttccctccggtcctgaccttcttcggctgagtacactgtgaactaatatgaccttcttcattgc 10466054  T
Q  164 agttataacaaacgatatctccacgcttgcattcagc 200  Q
    ||||||| || || || || |||||||| ||||||||    
T  10466053 agttatagcagacaatgtccccacgcttacattcagc 10466017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 19437990 - 19438160
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    ||||||||||||| |||||| ||||| || | ||| || |||||||| || || |||||||| ||||| || |||| ||||||    ||||||||||| |    
T  19437990 tgcgtaccagtcagagcaaacaccttaccactagtcctaaccttcttcggctgtgtgcactgcgaactgatatggcgctcttcgttgcagttataacata 19438089  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    | | ||| ||||||||||| ||||| |     || ||||||||||| || |||||||| || |||||||||    
T  19438090 caacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctcatct 19438160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 24367384 - 24367458
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaat 146  Q
    |||||||||||||||||||||||| ||||| || ||||||||    ||||| ||||  | |||||||||||||||    
T  24367384 agtctgcgtaccagtcaaagcaaacaccttcccaccagttctagttttcttcggttcagggcactgtgaactaat 24367458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 16813668 - 16813752
Alignment:
Q  116 ccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgatatctccacgcttgcattcagc 200  Q
    |||||||||| | | ||||||||||| |||  || || |||||| |||| ||  ||||||| ||||| |||||||||||||||||    
T  16813668 ccttcttaggcttcttgcactgtgaagtaagatgaccttcttcatcacaattgaaacaaacaatatcaccacgcttgcattcagc 16813752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 70513 - 70695
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||    
T  70513 tcattggtagtctgcgtaccagtcaaaacaaatacttttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcctcattac 70612  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  70613 agttataacaaacaatatctccacgcttgcattcagccaacacatgacctttatgaccgcatctgaaacacttcttctcatct 70695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 27903497 - 27903679
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||  ||    
T  27903497 tcattggtagtctgcgtaccagtcaaagcaaatacttttcctcaagttctgaccttcttaggttgcgtgcactgtgaactaatgttgccctcctcattac 27903596  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  27903597 agttataacaaacaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaaacacttcttctcatct 27903679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 20893143 - 20893279
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| || |  || ||||| ||||| || || |||||||||   |    
T  20893143 tcattggtagtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctcagtacactgcgaactgatatgcccctcttcattgc 20893242  T
Q  164 agttataacaaacgatatctccacgcttgcattcagc 200  Q
    |||| ||  | || ||||| |||||||||||||||||    
T  20893243 agttgtagtagacaatatccccacgcttgcattcagc 20893279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 51603944 - 51603771
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    |||||| ||||||||||||||||| || ||||| |||  ||| |||||||| || || |||||||| | ||| |||||||||||||||  ||| |||||     
T  51603944 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaattatag 51603845  T
Q  172 caaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || || | ||| || |||||||| || || | ||  ||||| ||||| || ||||||||||| |||||||||||    
T  51603844 cacacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatc 51603771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 53750622 - 53750449
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    |||||| ||||||||||||||||| || ||||| |||  ||| |||||||| || || |||||||| | ||| |||||||||||||||  ||| |||||     
T  53750622 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaattatag 53750523  T
Q  172 caaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || || | ||| || |||||||| || || | ||  ||||| ||||| || ||||||||||| |||||||||||    
T  53750522 catacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatc 53750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 246
Target Start/End: Original strand, 16150757 - 16150930
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataac 172  Q
    |||| |||||||||||| ||||| || || || || ||||| |||||||| |||| | |||| || || ||||| || ||||||||| |||||||||| |    
T  16150757 gtctacgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaatatgcccctcttcatcacagttatagc 16150856  T
Q  173 aaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |||| | ||| ||||||||||| ||||| |     || ||||||||||| || ||||| || ||||||||||||    
T  16150857 aaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatct 16150930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 246
Target Start/End: Original strand, 16154903 - 16155076
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataac 172  Q
    |||| |||||||||||| ||||| || || || || ||||| |||||||| |||| | |||| || || ||||| || ||||||||| |||||||||| |    
T  16154903 gtctacgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttcttgcattgcgagctaatatgcccctcttcatcacagttatagc 16155002  T
Q  173 aaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |||| | ||| ||||||||||| ||||| |     || ||||||||||| || ||||| || ||||||||||||    
T  16155003 aaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatct 16155076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 7357379 - 7357561
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||| ||||||||||| ||||| ||||| || | ||||||  ||||||| || |  |  |||||||||||||| || |||||| ||   |    
T  7357379 tcattggtagtctgtgtaccagtcaatgcaaacaccttcccactagttctagccttcttcggctcaggacactgtgaactaatatgaccctctccattgc 7357478  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |||| || || || || |||||||||||||||||||| ||    ||||| |||||||| || ||||| || ||| ||||||||    
T  7357479 agttgtagcagacaatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagcacttcctctcatct 7357561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 11204392 - 11204343
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    ||||||||||| |||||||||||||||||||| ||||| || ||||||||    
T  11204392 tcattggtagtntgcgtaccagtcaaagcaaacaccttcccaccagttct 11204343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 200
Target Start/End: Complemental strand, 44659018 - 44658890
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    ||||||||||||| |||||||||| |||||||| ||||||||   |||||| ||||  |  |||||||||||||| || |  ||| ||   || || |||    
T  44659018 agtctgcgtaccattcaaagcaaacacctttccaccagttctagtcttcttcggttcaggacactgtgaactaatatgacattctccattgcaattgtaa 44658919  T
Q  172 caaacgatatctccacgcttgcattcagc 200  Q
    || || ||||| |||||||||||||||||    
T  44658918 cagacaatatccccacgcttgcattcagc 44658890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 14993515 - 14993448
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaact 143  Q
    ||||||||| |||||||||| ||||| || || || || ||||||||||||||||| ||||| |||||    
T  14993515 tgcgtaccattcaaagcaaacaccttgccacctgtcctaaccttcttaggttgcgtacactgcgaact 14993448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 247
Target Start/End: Complemental strand, 29450689 - 29450514
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    |||||||||||||||||||||||| |||||||| ||| ||||   |||||| || |  |  ||||||||||| ||||| || ||  ||   ||||| |||    
T  29450689 agtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactgatgtgaccttccccattgcagttgtaa 29450590  T
Q  172 caaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    || || || || ||||||||||||||||| ||    ||||| |||||||| || |||||||| ||| | |||||||    
T  29450589 cagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaaacacttcctatcatctc 29450514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 3261946 - 3261905
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  3261946 agtctgcgtaccagtcaaagcaaacacctttccaccaattct 3261905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 10417433 - 10417251
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||    
T  10417433 tcattggtagtctgcgtaccagtcaaagcaaatacttttcctccagttctgaccttcttaggttgcgggcactgcgaactaatgtgaccctcatcaccac 10417334  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10417333 agttaaaacaaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 10417251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 16831916 - 16831735
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||| || || |||||||||| ||| || |||||||||||    |    
T  16831916 tcattagtagtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgc 16831817  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    |||||||||| || | ||| ||||||||||| || || ||||| ||||| |||||||| || ||||| || |||||||||||    
T  16831816 agttataacatacaacatcaccacgcttgcagtccgctaacacgtgacccttctgaccacacctgaagcacttcttctcatc 16831735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 247
Target Start/End: Original strand, 35982934 - 35983105
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||| ||||||||||||| ||||| || || || || ||||||||||| ||||| || || |||||||| || || || |||  |||||| || ||||    
T  35982934 tgcgtaacagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacaatgcgaactaatatgtccttcctcattacagttgtagcaaa 35983033  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    | ||||| ||||||||||| ||||||||    || |||||||| || ||||||||||| |||||||||||||    
T  35983034 caatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctc 35983105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 17189115 - 17189297
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| ||||| |||||||||||||| ||||| || || || || ||||| | |||||| || || || ||||||||||| ||||||||||| ||| |||    
T  17189115 tcattagtagtttgcgtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcac 17189214  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    | ||||||||||| | ||| || | |||||| | |||||||   || ||||||||||| || ||||| || ||||||||||||    
T  17189215 aattataacaaacaacatcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaagcacttcttctcatct 17189297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 8744770 - 8744597
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    |||||| ||||||||||||||||| || ||||| |||  ||| |||||||| ||||| |||||||| | ||| |||||||||||||||  ||| |||||     
T  8744770 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggttgtgtgcactgagtactgatgtggccctcttcattacaattatag 8744671  T
Q  172 caaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || || | ||| || |||||||| || || | ||  ||||| ||||| || ||||||||||| |||||||||||    
T  8744670 catacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatc 8744597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 248
Target Start/End: Complemental strand, 16327097 - 16326913
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||| || |  || ||||| ||||| || || |||||| ||   |    
T  16327097 tcattggtagtctgcgtaccagtcaatgcaaacacctttccaccagttctaaccttcttcggcttagtacactgcgaactgatatgaccctctccattgc 16326998  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctct 248  Q
    |||| || || || || || |||||||| |||||||| ||    || || |||||||| || |||||||||||| ||||||||||    
T  16326997 agttgtagcagacaatgtccccacgcttacattcagctaaattgtgtcccttctgaccacacctgaaacatttcctctcatctct 16326913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 16384727 - 16384579
Alignment:
Q  97 acctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgatatctccacgcttgcatt 196  Q
    |||||||| |||||||| |||||||| || || |||||||| | ||| || ||||||||||||  ||| ||||| || || | ||| ||||||||||| |    
T  16384727 acctttccaccagttctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcattacaattatagcatacaacatcaccacgcttgcaat 16384628  T
Q  197 cagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    |||||||||  ||||| |||||||| || ||||| || |||||||||||    
T  16384627 cagccaacatgtgacccttctgaccacacctgaagcacttcttctcatc 16384579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 246
Target Start/End: Original strand, 24190051 - 24190227
Alignment:
Q  70 gtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttat 169  Q
    |||||||||||||||||||| |||||  | || || || ||||| | |||||| || || || ||||||||||| ||||||||||| ||| |||| ||||    
T  24190051 gtagtctgcgtaccagtcaacgcaaactctttcccaccggttctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcacaattat 24190150  T
Q  170 aacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||||| | ||| || | |||||| | |||||||   || ||||||||||| || ||||| || ||||||||||||    
T  24190151 aacaaacaacatcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaagcacttcttctcatct 24190227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 31941656 - 31941826
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||||||||| ||||| || ||||| || |||||||| || ||||| |||| |||||| || |||||||| |||   || ||||||||||    
T  31941656 tgcgtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactatgaactgatatggccctcctcattgcaattataacaaa 31941755  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    | | ||| ||||||||||| ||||| |     || || |||||||| || |||||||| ||||||||||||    
T  31941756 caacatcaccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatct 31941826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 245
Target Start/End: Original strand, 13944773 - 13944946
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    |||||| ||||||||||||||||| || ||||| |||  ||| |||||||| || || |||||||| | ||| |||||||||||||||  ||| |||||     
T  13944773 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaattatag 13944872  T
Q  172 caaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || || | ||| || |||||||| || || | ||  ||||| ||||| || ||||||||||| |||||||||||    
T  13944873 catacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatc 13944946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 13317859 - 13317775
Alignment:
Q  162 acagttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||||||||||||| | ||| ||||||||||| || || || ||||||||||| ||||| ||||||||||| ||||||||||||    
T  13317859 acagttataacaaaccacatccccacgcttgcaatccgctaaaacatgacctttttgaccacatctgaaacacttcttctcatct 13317775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 31692561 - 31692437
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    ||||||||||||| |||||| ||||| || ||||| || |||||||| || ||||| ||||||||||| || |||||||| |||   |||||||||||||    
T  31692561 tgcgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactgatatggccctcctcattgcagttataacaaa 31692462  T
Q  176 cgatatctccacgcttgcattcagc 200  Q
    | | ||| |||| |||||| |||||    
T  31692461 caacatcaccactcttgcagtcagc 31692437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 13317922 - 13317864
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttctt 122  Q
    ||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  13317922 tcattagtagtctgcgtaccagtcaaagcaaacacttttccaccagttctgaccttctt 13317864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 2247233 - 2247130
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataac 172  Q
    ||||||||||||||||||||||| ||||| || |||||   | |||||||||| | | ||||||| |||||||| || || ||||||  ||||||||| |    
T  2247233 gtctgcgtaccagtcaaagcaaaaaccttcccaccagtctgggccttcttaggcttcttgcactgcgaactaatatgaccttcttcattacagttatagc 2247134  T
Q  173 aaac 176  Q
    ||||    
T  2247133 aaac 2247130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 14290908 - 14290784
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||||||||| ||||| || || || |  ||||||||||| | | ||||||| || ||||| || ||||||||| |||| ||||| ||||    
T  14290908 tgcgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttaggcttcttgcactgcgagctaatatgtccctcttcatcacaattatagcaaa 14290809  T
Q  176 cgatatctccacgcttgcattcagc 200  Q
      | ||| |||||||| || |||||    
T  14290808 taacatccccacgcttacaatcagc 14290784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 15008917 - 15008833
Alignment:
Q  116 ccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgatatctccacgcttgcattcagc 200  Q
    |||||||||| | | ||||||| |||||||  ||||| |||||| |||| ||  ||||||| ||||| |||||||||||||||||    
T  15008917 ccttcttaggattcttgcactgcgaactaagatggccttcttcatcacatttgaaacaaacaatatcaccacgcttgcattcagc 15008833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 16378322 - 16378284
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaataccttt 102  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  16378322 tcattagtagtctgcgtaccagtccaagcaaataccttt 16378284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 10408717 - 10408758
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  10408717 agtctgcgtaccagtcaaagcaaacacctttccaccaattct 10408758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 16825655 - 16825594
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactg 137  Q
    |||||||||||||||||||| ||||| || || || || ||||||||||| ||||| |||||    
T  16825655 tgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactg 16825594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 28757068 - 28757109
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  28757068 agtctgcgtaccagtcaaagcaaacacctttcccccaattct 28757109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 139; Significance: 9e-73; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 94057 - 93875
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||| |||||||    
T  94057 tcattagtagtctgcgtaccagtcaaagcaaatacttttcctccagtcctgaccttcttaggttgagtgcactgcgaactaatgtgaccctcatcaccac 93958  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  93957 agttaaaacaaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 93875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 246
Target Start/End: Original strand, 115754 - 115885
Alignment:
Q  115 accttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgatatctccacgcttgcattcagccaacacatgacctt 214  Q
    |||||||| ||||| |||||||| ||||| || || |||||  ||   || ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |    
T  115754 accttcttcggttgagtgcactgagaactgatatgaccctccccattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgaccct 115853  T
Q  215 tctgaccgcatctgaaacatttcttctcatct 246  Q
    |||| || || ||||| || ||||||||||||    
T  115854 tctgtccacacctgaagcacttcttctcatct 115885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 9e-73; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 20824479 - 20824661
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| || || |||||||    
T  20824479 tcattggtagtctgcgtaccagtcaaagcaaatacttttcctccagtcctgaccttcttaggttgcgtgcactgcgaactaatgtgaccttcatcaccac 20824578  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||| ||||||| ||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  20824579 agttaaaacaaacaatatctccacgcttgcagtccaccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 20824661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 67 - 246
Target Start/End: Original strand, 22464979 - 22465158
Alignment:
Q  67 ttggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagt 166  Q
    ||||||||||| |||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| || |||||||||||||| || ||||| |    
T  22464979 ttggtagtctgggtaccagtcaaagcgaaaaccttccctccaattctgaccttcttaggttgcgtgcactgcgagctaatgtggccctcatcgccacaat 22465078  T
Q  167 tataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    || |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  22465079 taaaacaaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatct 22465158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 28892284 - 28892102
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||| | || |||||| |||||||||||||    
T  28892284 tcattagtagtctgagtaccagtcaaagcgaatacttttcctccggttctgaccttcttaggttgagtgcactgcgcaccaatgtgaccctcttcaccac 28892185  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |  || |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28892184 aactaaaacaaacgatgtctccccgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 28892102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 20778939 - 20779121
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| ||||||||  ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| | || | |||||||||| |||||||    
T  20778939 tcattagtagtctgattaccagtcaaagcgaatacctttcctccggttctgaccttcttaggttgagtgcactgcgcaccattgtggccctcctcaccac 20779038  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |  || |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20779039 aactaaaacaaacgttgtctccacgcttgcattcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatct 20779121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 25851098 - 25851234
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||  ||||||| || |  |  |||||||||||||| || |||||| ||   |    
T  25851098 tcattggtagtctgcgtaccagtcaaagcaaataccttcccaccagttctagccttcttcggctcaggacactgtgaactaatatgaccctctccattgc 25851197  T
Q  164 agttataacaaacgatatctccacgcttgcattcagc 200  Q
    |||| || || || || |||||||||||| |||||||    
T  25851198 agttgtagcagacaatgtctccacgcttgtattcagc 25851234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 22505705 - 22505797
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctct 156  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||||||| |||||||| ||||  |  ||||||||||| ||||| ||||||    
T  22505705 tcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacactgtgaactgatgtgaccctct 22505797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 20345308 - 20345366
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttctt 122  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||  |||||||    
T  20345308 tcattggtagtctgcgtaccagttaaagcaaataccttcccaccagttctagccttctt 20345366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 248
Target Start/End: Complemental strand, 23563498 - 23563326
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||| ||||||||||| ||||| || ||||| || |||||||| || ||||| ||||| |||||||| || || || |||   |||||||||||||    
T  23563498 tgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgcgaactaatatgaccttcctcattgcagttataacaaa 23563399  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctct 248  Q
    |  | ||||||| ||| || ||||| |     || ||||||||||| || ||||| || ||||||||||||||    
T  23563398 cattgtctccacccttacagtcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctct 23563326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 245
Target Start/End: Complemental strand, 17266661 - 17266495
Alignment:
Q  79 gtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacga 178  Q
    ||||||||||||||||| || ||||| |||  ||| |||||||| || || |||||||| | ||| ||||| |||||||||  ||| ||||| || || |    
T  17266661 gtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaa 17266562  T
Q  179 tatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
     ||| || |||||||| || || | ||  ||||| ||||| || || ||||| || |||||||||||    
T  17266561 catcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctcatc 17266495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 67 - 246
Target Start/End: Original strand, 1424 - 1603
Alignment:
Q  67 ttggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagt 166  Q
    ||||||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||| || ||||| |    
T  1424 ttggtagtctgtgtaccagtcaaagcgaataccttccctcaagttctgaccttcttaggttgcgtgcactgcgagctaatgtggccctcatcgccacaat 1523  T
Q  167 tataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    || ||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  1524 taaaacaaacgatatctccaagcttgcattcagccaacaaatgaccattctgaccgcatctgaaacatttcttctcatct 1603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 67 - 246
Target Start/End: Complemental strand, 20853989 - 20853810
Alignment:
Q  67 ttggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagt 166  Q
    ||||||||||| |||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||| || ||||| |    
T  20853989 ttggtagtctgggtaccagtcaaagcgaaaaccttccctcaagttctgaccttcttaggttgcgtgcactgcgagctaatgtggccctcatcgccacaat 20853890  T
Q  167 tataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    || |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  20853889 taaaacaaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatct 20853810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 21961185 - 21961321
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || |  | |||||| ||||| || || |||||| ||   |    
T  21961185 tcattggtagtctgcgtaccagtcaaagcaaatacctttccaccagttctaaccttcttcggctcagggcactgcgaactgatatgaccctctccattgc 21961284  T
Q  164 agttataacaaacgatatctccacgcttgcattcagc 200  Q
    |||| || || || ||||| |||||||| ||||||||    
T  21961285 agttgtagcagacaatatccccacgcttacattcagc 21961321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 247
Target Start/End: Complemental strand, 21742772 - 21742601
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||| ||||||||||| || || || || ||||||||||| ||||| ||||| |||||||| || || || |||  |||||| || ||||    
T  21742772 tgcgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaa 21742673  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    | | ||| ||||||||||| ||||||||    || ||||||||||| || || || || |||||||||||||    
T  21742672 caacatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctc 21742601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 52988899 - 52989081
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||||||| |||||||| ||||  |  || |||||||| || || |||||| ||   |    
T  52988899 tcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacattgtgaactgatatgaccctctccattgc 52988998  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |||| || || || || || |||||||| |||||||| ||    ||||| |||||||| || |||||||| ||| ||||||||    
T  52988999 agttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccacacctgaaacacttcctctcatct 52989081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 20074941 - 20074759
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||| ||||| | ||| || |||||||| |||||||| || |  |  ||||| ||| | || || |||||| ||   |    
T  20074941 tcattggtagtctgcgtaccagtcaatgcaaacatcttgcccccagttctaaccttcttcggctcaggacactgcgaattgatatgaccctctccattgc 20074842  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |||| || || || ||||| ||||||||||||||||||||    ||||| |||||||| || ||||| || ||| ||||||||    
T  20074841 agttgtagcagacaatatccccacgcttgcattcagccaagctgtgacccttctgaccacacctgaagcacttcctctcatct 20074759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 248
Target Start/End: Complemental strand, 22015965 - 22015793
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||||||||| ||||| || || || || |||||||| || ||||| |||||  ||||||| ||  | || ||    |||||||||||||    
T  22015965 tgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttcggctgcgtacactgcaaactaatatgatcttcctcgttgcagttataacaaa 22015866  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctct 248  Q
    | | ||| ||||||||||| ||||| ||    || ||||||||||| || ||||| || ||||||||||||||    
T  22015865 caacatccccacgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctct 22015793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 48426039 - 48426080
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  48426039 agtctgcgtaccagtcaaagcaaacacctttccaccaattct 48426080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 24096847 - 24096711
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||| ||||| || || || || |||||  ||||||| || || || ||||||||||| || || || |||||    |    
T  24096847 tcattagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctagccttcttcggctgagtacactgtgaactgatatgaccttcttcgttgc 24096748  T
Q  164 agttataacaaacgatatctccacgcttgcattcagc 200  Q
    |||| || ||||| || || |||||||| ||||||||    
T  24096747 agttgtagcaaacaatgtccccacgcttacattcagc 24096711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 180954 - 180820
Alignment:
Q  112 ctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgatatctccacgcttgcattcagccaacacatgac 211  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  180954 ctgaccttcttaggttgagtgcactgcgaactaatgtgaccctcatcaccacagttaaaacaaacaatatctccacgcttgcaatcagccaacacatgac 180855  T
Q  212 ctttctgaccgcatctgaaacatttcttctcatct 246  Q
    | |||||||||||||||||||||||||||||||||    
T  180854 ccttctgaccgcatctgaaacatttcttctcatct 180820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 71; Significance: 3e-32; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 49343 - 49162
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcct-ccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcacca 162  Q
    ||||| |||||||||||||||| ||||||||| || |||||| |||||||| |||||||| ||||| ||||||||||||||||| |||||||||||| ||    
T  49343 tcattagtagtctgcgtaccagccaaagcaaacac-tttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatca 49245  T
Q  163 cagttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || ||||| ||||| | ||| ||||||||||| | ||| |     || ||||||||||| || ||||||||||||||||||||    
T  49244 caattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatc 49162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 58377 - 58196
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcct-ccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcacca 162  Q
    ||||| |||||||||||||||| ||||||||| || |||||| |||||||| |||||||| ||||| ||||||||||||||||| |||||||||||| ||    
T  58377 tcattagtagtctgcgtaccagccaaagcaaacac-tttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatca 58279  T
Q  163 cagttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || ||||| ||||| | ||| ||||||||||| | ||| |     || ||||||||||| || ||||||||||||||||||||    
T  58278 caattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatc 58196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 64765 - 64584
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcct-ccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcacca 162  Q
    ||||| |||||||||||||||| ||||||||| || |||||| |||||||| |||||||| ||||| ||||||||||||||||| |||||||||||| ||    
T  64765 tcattagtagtctgcgtaccagccaaagcaaacac-tttcctaccagttctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatca 64667  T
Q  163 cagttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || ||||| ||||| | ||| ||||||||||| | ||| |     || ||||||||||| || ||||||||||||||||||||    
T  64666 caattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatc 64584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 29774 - 29844
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaact 143  Q
    ||||||||||||||||||||||| ||||| || || || || |||||||| |||||||| ||||| |||||    
T  29774 gtctgcgtaccagtcaaagcaaacaccttaccacctgtcctaaccttcttcggttgcgtacactgcgaact 29844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 11385576 - 11385394
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||||| | |||||| ||||| |||||||||||||| ||||||||||| ||| |||    
T  11385576 tcattagtagtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggttgagtgcactgtgaactgatgtggccctcctcatcac 11385477  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    | ||||||||||| | ||| || | |||||| | ||||||    || ||||||||||| || ||||| || ||||||||||||    
T  11385476 aattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcatct 11385394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 14140781 - 14140922
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||| |||||||| || || |||||||| | ||| ||||||||||||||   ||    
T  14140781 tcattagtagtctgcgtaccagtcaaagcaaataccttcccaccagttctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcgttac 14140880  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaaca 205  Q
    | |||||||| || | ||| ||||||||||| ||||| ||||    
T  14140881 aattataacatacaacatcaccacgcttgcaatcagctaaca 14140922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 203
Target Start/End: Original strand, 19150125 - 19150252
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||| |||||||| || || ||  | ||  |||||||||||||||| ||||| |||||||| || || ||||||  |||||| || ||||    
T  19150125 tgcgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaactaatatgtccttcttcattacagttgtagcaaa 19150224  T
Q  176 cgatatctccacgcttgcattcagccaa 203  Q
    | ||||||||||||||||| ||||||||    
T  19150225 caatatctccacgcttgcaatcagccaa 19150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 203
Target Start/End: Original strand, 20749524 - 20749651
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||| |||||||| || || ||  | ||  |||||||||||||||| ||||| |||||||| || || ||||||  |||||| || ||||    
T  20749524 tgcgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaactaatatgtccttcttcattacagttgtagcaaa 20749623  T
Q  176 cgatatctccacgcttgcattcagccaa 203  Q
    | ||||||||||||||||| ||||||||    
T  20749624 caatatctccacgcttgcaatcagccaa 20749651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 21755514 - 21755696
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||||||| |||||||| || |  |  |||||||| ||||| || |||||| ||   |    
T  21755514 tcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggctcaggacactgtgagctaatatgaccctctccattgc 21755613  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |||| || || || ||||| |||||||| |||||||| ||    ||||| |||||||| || |||||||| ||| ||||||||    
T  21755614 agttgtagcagacaatatccccacgcttacattcagctaaagtgtgacccttctgaccacacctgaaacacttcctctcatct 21755696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 18051092 - 18050919
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    |||||| ||||||||||||||||| || ||||| |||  ||| |||||||| || || |||||||| | ||| ||||| |||||||||  ||| ||||||    
T  18051092 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattataa 18050993  T
Q  172 caaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || || | ||| || |||||||| || || | ||  ||||| ||||| || ||||||||||| |||||||||||    
T  18050992 catacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatc 18050919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 14283521 - 14283340
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||||||||| || || || || ||||| |||||||| || || | ||||||||  || || || ||||||||    |    
T  14283521 tcattagtagtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtgggcactgtgtgctgatatgaccctcttcgttgc 14283422  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    |||||||||| || | ||| ||||||||||| ||||| ||    ||||| |||||||| || ||||| || |||||||||||    
T  14283421 agttataacatacaacatcaccacgcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatc 14283340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 14261386 - 14261254
Alignment:
Q  71 tagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttata 170  Q
    |||| |||||||||||||| ||||||||||| || || || || ||||||||||| ||| |  |||| |||||||| || || || |||  |||||| ||    
T  14261386 tagtttgcgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcataaactgcgaactaatatgtccttcctcattacagttgta 14261287  T
Q  171 acaaacgatatctccacgcttgcattcagccaa 203  Q
     ||||| ||||| ||||||||||| ||||||||    
T  14261286 gcaaacaatatccccacgcttgcaatcagccaa 14261254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 13965815 - 13965679
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||| ||||| ||||| || ||||||||  ||||||| || |  |  ||||||||||| || || |||||| ||   |    
T  13965815 tcattggtagtctgcgtaccagtcaatgcaaacaccttcccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgc 13965716  T
Q  164 agttataacaaacgatatctccacgcttgcattcagc 200  Q
    | || || || || ||||| |||||||||||||||||    
T  13965715 aattgtagcagacaatatccccacgcttgcattcagc 13965679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 15114312 - 15114421
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataac 172  Q
    |||| |||||||||||||||||| ||||| || ||||||  | |||||||||| | | ||||||| |||||||| || || |||||   ||||||||| |    
T  15114312 gtctacgtaccagtcaaagcaaaaaccttcccaccagtttgggccttcttaggcttcttgcactgcgaactaatatgaccttcttccttacagttatagc 15114411  T
Q  173 aaacgatatc 182  Q
    |||| |||||    
T  15114412 aaaccatatc 15114421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 12459730 - 12459866
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| ||||||||||||||  ||||  |||| || || ||||| || ||||||||||| || || || |||||||||||||| || || ||||||   |    
T  12459730 tcatttgtagtctgcgtacctttcaattcaaacactttccctccggtcctgaccttcttcggctgagtacactgtgaactaatatgaccttcttcattgc 12459829  T
Q  164 agttataacaaacgatatctccacgcttgcattcagc 200  Q
    ||||||| || || || || |||||||| ||||||||    
T  12459830 agttatagcagacaatgtccccacgcttacattcagc 12459866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 13676565 - 13676689
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    ||||||||||||| |||||| || || || || ||||| |||||||| ||||| |  ||||||||||| || |||||||| |||   |||||||| ||||    
T  13676565 tgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaa 13676664  T
Q  176 cgatatctccacgcttgcattcagc 200  Q
    | || ||||| ||||| || |||||    
T  13676665 ctatgtctccccgcttacaatcagc 13676689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 15099741 - 15099623
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataac 172  Q
    |||||| ||||||| |||||||| ||||| || || || || |||||||| || ||||| ||||| ||||| || || || || |||   ||||||||||    
T  15099741 gtctgcataccagttaaagcaaacaccttaccacctgtcctaaccttcttcggctgcgtacactgcgaactgatatgaccttcctcattgcagttataac 15099642  T
Q  173 aaacgatatctccacgctt 191  Q
    ||||||| || ||||||||    
T  15099641 aaacgatgtccccacgctt 15099623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 26091937 - 26091896
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  26091937 agtctgcgtaccagtcaaagcaaacacctttccaccaattct 26091896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 26115725 - 26115688
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  26115725 tgcgtaccagtcaaagcaaacacctttccaccagttct 26115688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 40924956 - 40924915
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  40924956 agtctgcgtaccagtcaaagcaaacacctttcccccaattct 40924915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 49155411 - 49155452
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  49155411 agtctgcgtaccagtcaaagcaaacacctttccaccaattct 49155452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 15343533 - 15343573
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcc 104  Q
    ||||| |||||||||||||||||||||||||| || |||||    
T  15343533 tcattagtagtctgcgtaccagtcaaagcaaacacttttcc 15343573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 6420 - 6239
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||  |||| |||||||| | ||| |||||||||| |||   ||    
T  6420 tcattagtagtctgtgtaccagtcaaagcaaatacctttccaccagttctaaccttcttctgttgtgtgcactgagtactgatgtggccctattcgttac 6321  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    | ||||| || || ||||| |||||||| || ||||| | ||| ||||| |||||||| || ||||| || |||||||||||    
T  6320 aattatagcatacaatatcgccacgcttacaatcagctagcacgtgacccttctgaccacacctgaagcacttcttctcatc 6239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 8e-27; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 64 - 245
Target Start/End: Original strand, 22054041 - 22054222
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||||||||| || ||||| ||||||||  ||||||| || || |||||||||| ||| || |||||||||||    |    
T  22054041 tcattagtagtctgcgtaccagtcaaagcaaacacttttccaccagttctatccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgc 22054140  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    |||||||||| || | ||| ||||||||||| || || || |  ||||| |||||||| |||||||| || |||||||||||    
T  22054141 agttataacatacaacatcaccacgcttgcaatccgctaaaaggtgacccttctgaccacatctgaagcacttcttctcatc 22054222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 247
Target Start/End: Original strand, 21928626 - 21928789
Alignment:
Q  84 agtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgatatct 183  Q
    |||||||||||| ||||| || || || |  |||||||| || | | |||| ||||| ||||| || ||||||||| |||| ||||| ||||||| |||     
T  21928626 agtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttcttgcattgtgagctaatatgcccctcttcatcacaattatagcaaacgacatca 21928725  T
Q  184 ccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    ||||||||||| ||| ||||    || |||||||| || ||||||||||| |||||||||||||    
T  21928726 ccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaaacacttcttctcatctc 21928789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 16268827 - 16268645
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||||||||| || ||||| ||||||||  ||||||| || |  |  ||||||||||| || || |||||| ||   |    
T  16268827 tcattggtagtctgcgtaccagtcaaagcaaacacttttccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgc 16268728  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    | || || || || ||||| ||||||||||||||||| |    |||||| |||||||| || ||||| || ||| ||||||||    
T  16268727 aattgtagcagacaatatccccacgcttgcattcagctaggctatgacccttctgaccacacctgaagcacttcctctcatct 16268645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 245
Target Start/End: Original strand, 19985366 - 19985539
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    ||||||||||| |||||| ||||||||||| || || || |  ||||||||||| | | |||||||||| ||||| || ||||||||| |||| |||||     
T  19985366 agtctgcgtactagtcaatgcaaataccttgccacctgtccgaaccttcttaggcttcttgcactgtgagctaatatgcccctcttcatcacaattatag 19985465  T
Q  172 caaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    ||||| | ||| |||| |||||| ||||| ||    || | |||||| || ||||||||| | |||||||||||    
T  19985466 caaacaacatccccactcttgcaatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcatc 19985539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 22027883 - 22027788
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttca 159  Q
    ||||| |||||||||||||| ||||| ||||| || ||||| || ||||| |||||||| || || |||||||| ||||| || ||||||||||||    
T  22027883 tcattagtagtctgcgtaccggtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtgcactgagaactgatatggccctcttca 22027788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 22374062 - 22374183
Alignment:
Q  79 gtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacga 178  Q
    ||||||||||||||||| ||||| || || |||    |||||||||| | | ||||||| || ||||| || || |||||| |||| ||||| ||||| |    
T  22374062 gtaccagtcaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaatatgaccttcttcatcacaattatagcaaacaa 22374161  T
Q  179 tatctccacgcttgcattcagc 200  Q
    |||| ||||||||||| |||||    
T  22374162 tatcaccacgcttgcaatcagc 22374183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 200
Target Start/End: Complemental strand, 6607063 - 6606936
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataac 172  Q
    ||||| |||||||  |||||||| ||||| || || || || ||||||||||| || || ||||||||||| |  || || |||||| |||| ||  | |    
T  6607063 gtctgagtaccagctaaagcaaacaccttgccacctgtcctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcatcacaattgaagc 6606964  T
Q  173 aaacgatatctccacgcttgcattcagc 200  Q
    |||| ||||| |||||||||||||||||    
T  6606963 aaacaatatccccacgcttgcattcagc 6606936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 20391273 - 20391397
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctga-ccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    ||||||||||||||||| ||||| |||||||| || | ||||| |||||||||| | | ||||||| |||||||  || || |||||  |||| ||  |     
T  20391273 gtctgcgtaccagtcaatgcaaacacctttccacctg-tctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgtcacaattgaag 20391371  T
Q  172 caaacgatatctccacgcttgcattc 197  Q
    ||||| ||||| ||||||||||||||    
T  20391372 caaacaatatcaccacgcttgcattc 20391397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 23097718 - 23097606
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||||| | |||||| || || |||||||||||||| ||||||||||| ||| |||    
T  23097718 tcattagtagtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggctgagtgcactgtgaactgatgtggccctcctcatcac 23097619  T
Q  164 agttataacaaac 176  Q
    | |||||||||||    
T  23097618 aattataacaaac 23097606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 246
Target Start/End: Complemental strand, 19716711 - 19716535
Alignment:
Q  70 gtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttat 169  Q
    |||||||||||||||||||| ||||| || || || || ||||| |||||||| || || |||||||| ||||| || ||||||||||     |||||||    
T  19716711 gtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttat 19716612  T
Q  170 aacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||||| | ||| | ||||||||| ||||| |     || ||||||||||| || |||||||| ||||||||||||    
T  19716611 aacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatct 19716535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 246
Target Start/End: Complemental strand, 19721274 - 19721098
Alignment:
Q  70 gtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttat 169  Q
    |||||||||||||||||||| ||||| || || || || ||||| |||||||| || || |||||||| ||||| || ||||||||||     |||||||    
T  19721274 gtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttat 19721175  T
Q  170 aacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||||| | ||| | ||||||||| ||||| |     || ||||||||||| || |||||||| ||||||||||||    
T  19721174 aacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatct 19721098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 245
Target Start/End: Original strand, 12577104 - 12577277
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    |||||| ||||||||||||||||| || ||||| |||  ||| |||||||| || || |||||||| | ||| ||||| |||||||||  ||| |||||     
T  12577104 agtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatag 12577203  T
Q  172 caaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    || || | ||| || |||||||| || || | ||  ||||| ||||| || ||||||||||| |||||||||||    
T  12577204 catacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatc 12577277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 23274352 - 23274472
Alignment:
Q  80 taccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgat 179  Q
    ||||||||| |||||| || || || ||||| || |||||||| ||||| |||||||||||||| || |||||||| |||   |||||||| ||||| ||    
T  23274352 taccagtcagagcaaacactttaccaccagtcctaaccttcttcggttgtgtgcactgtgaactgatatggccctcctcattgcagttatagcaaactat 23274451  T
Q  180 atctccacgcttgcattcagc 200  Q
     ||||| ||||| || |||||    
T  23274452 gtctccccgcttacaatcagc 23274472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 20848340 - 20848381
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  20848340 agtctgcgtaccagtcaaagcaaacacctttccaccaattct 20848381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 22733423 - 22733379
Alignment:
Q  115 accttcttaggttgcgtgcactgtgaactaatgtggccctcttca 159  Q
    ||||||||||||| | |||||||||||| |||||| |||||||||    
T  22733423 accttcttaggtttcttgcactgtgaaccaatgtgaccctcttca 22733379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 247
Target Start/End: Original strand, 12113 - 12284
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||| ||||||||||| || || || |  ||||||||||| ||||| |||||||||||||| || || ||||||  |||||| || ||||    
T  12113 tgcgtaccagtcaacgcaaataccttgccacctgtccgaaccttcttaggctgcgtacactgtgaactaatatgtccttcttcattacagttgtagcaaa 12212  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    | ||||| |||| |||||| ||||||||    || |||||||| || ||||||||||| |||||||||||||    
T  12213 caatatccccacacttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctc 12284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 247
Target Start/End: Original strand, 70261 - 70432
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||||||||| ||||| || || || || ||||||||||| ||||| ||||| |||||||| || || || |||  |||||| || ||||    
T  70261 tgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaa 70360  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    | ||||| ||||||||||| ||||||||    || |||||||| || ||||||||||| |||||||||||||    
T  70361 caatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctc 70432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 247
Target Start/End: Complemental strand, 4458 - 4284
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataac 172  Q
    ||||||||||||||||||||||| ||||| || || || || ||||||||||| ||||| ||||| |||||||| || || || |||  |||||| || |    
T  4458 gtctgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagc 4359  T
Q  173 aaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    |||| ||||| ||||||||||| ||||||||    || ||||||||||| || || || || |||||||||||||    
T  4358 aaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctc 4284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 65461 - 65279
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||| ||| | || ||||| || || || |||||||| || || |||||||||||||| |||||||| || ||| |||    
T  65461 tcattggtagtctgcgtaccagtcaatgcatacacttttccaccggtcctaaccttctttggctgggtgcactgtgaactgatgtggccttcctcatcac 65362  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    | ||||||||||| | |||||| | ||| || | |||||||   || ||||||||||| || ||||| || || |||||||||    
T  65361 aattataacaaacaacatctcctctcttacaattagccaacgtgtgtcctttctgaccacacctgaagcactttttctcatct 65279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 325860 - 325975
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||||||||| || || || || ||||| |||||||| ||||| |||||||||||||| || ||||||||||||   |||||||||||||    
T  325860 tgcgtaccagtcaaagcaaacactttaccaccggttctaaccttctttggttgtgtgcactgtgaactgatatggccctcttcattgcagttataacaaa 325959  T
Q  176 cgatatctccacgctt 191  Q
    | | |||||| |||||    
T  325960 caacatctccccgctt 325975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 245
Target Start/End: Complemental strand, 9951 - 9769
Alignment:
Q  63 atcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcacca 162  Q
    |||||| |||||||||||||||||||||||||| || ||||| |||||||| |||||||| ||  | |||||||||| ||| || |||| ||||||        
T  9951 atcattagtagtctgcgtaccagtcaaagcaaacacttttccaccagttctaaccttcttcggcagtgtgcactgtgtactgatatggcactcttcgttg 9852  T
Q  163 cagttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    ||||||||||| || | ||| ||||||||||| || || || |  ||||| |||| ||| || ||||| || |||||||||||    
T  9851 cagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgacccttctaaccacacctgaagcacttcttctcatc 9769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 246
Target Start/End: Complemental strand, 1001 - 835
Alignment:
Q  80 taccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgat 179  Q
    |||||||||||||||| || || || || ||||| |||||| | |||||||| ||||||||||| || || |||||||||   |||||||||||||| ||    
T  1001 taccagtcaaagcaaacactttaccaccggttctaaccttcctcggttgcgtacactgtgaactgatatgaccctcttcattgcagttataacaaacaat 902  T
Q  180 atctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||| ||||||||||| ||||| |     || ||||||||||| || ||||| || ||||||||||||    
T  901 atcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatct 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 650 - 469
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||| ||||||||||| ||||| || || ||  | ||||| |||||||| || || |||||||||||||| || ||||||||||||   |    
T  650 tcattagtagtctgtgtaccagtcaatgcaaacactttcccatcggttctaaccttcttcggctgtgtgcactgtgaactgatatggccctcttcattgc 551  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    ||||||| ||||| | ||| ||||||||||| ||||| |     || ||||||||||| || |||||||| |||||||||||    
T  550 agttatagcaaacaacatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctcatc 469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 53586 - 53405
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||| |||||||| || || || ||||| |||||||| || |  ||||| |||||||| || ||||||||||||  ||    
T  53586 tcattagtagtctgcgtaccagtcaatgcaaatactttcccaccggttctaaccttcttcggctatgtgcattgtgaactgatatggccctcttcattac 53487  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    |||||||||| || |  || ||||||||||| ||| | |  |  || ||||| ||||| || ||||| ||||||||||||||    
T  53486 agttataacataccacgtcaccacgcttgcaatcaactaggatgtgtcctttttgaccacacctgaatcatttcttctcatc 53405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 245
Target Start/End: Original strand, 263367 - 263548
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||||||||| || ||||| | |||||| |||||||| |  || |||||||||| ||| || |||||||||||   ||    
T  263367 tcattagtagtctgcgtaccagtcaaagcaaacacttttccactagttctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttac 263466  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    |||||||||| || | ||| |||  |||||| || || || |  ||||| |||||||| || ||||| || |||||||||||    
T  263467 agttataacatacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatc 263548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 245
Target Start/End: Original strand, 203522 - 203703
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||||||||| || ||||| | |||||| |||||||| |  || |||||||||| ||| || |||||||||||   ||    
T  203522 tcattagtagtctgcgtaccagtcaaagcaaacacttttccactagttctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttac 203621  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    |||||||||| || | ||| |||  |||||| || || || |  ||||| |||||||| || ||||| || |||||||||||    
T  203622 agttataacatacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatc 203703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 708 - 596
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||| ||||| || || || || ||||| | |||||| || || |||||||||||||| ||||||||||| ||| |||    
T  708 tcattagtagtctgcgtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgagtgcactgtgaactgatgtggccctcctcatcac 609  T
Q  164 agttataacaaac 176  Q
    | |||||||||||    
T  608 aattataacaaac 596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 2003 - 1829
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    ||||||||||| |||||||||||| || || || || ||||| | |||||| || || |||||||| ||||| ||||||||||| ||| |||| ||||||    
T  2003 agtctgcgtactagtcaaagcaaacactttcccaccggttctaatcttctttggctgagtgcactgggaactgatgtggccctcctcatcacaattataa 1904  T
Q  172 caaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    ||||| | ||| || | |||||| | ||||||    || ||||||||||| || ||||| || ||||||||||||    
T  1903 caaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagcacttcttctcatct 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 602 - 784
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||||||| |||||||| ||||  |  ||||||||||| || || |||||| ||   |    
T  602 tcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacactgtgaacttatatgaccctctccattgc 701  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |||| || || || || || |||||||| |||||||| ||    ||||| ||||||||||| ||||| || ||| ||||||||    
T  702 agttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccgcacctgaagcacttcctctcatct 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 40199 - 40381
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||||||||||||||||||||||||| || || || || ||||| |||||||| || || |||||||| | ||| || |||||||||||    |    
T  40199 tcattggtagtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcgttgc 40298  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |||||||||| || | ||| | ||||||||| || || ||||  ||||| |||| ||| || ||||| || ||||| ||||||    
T  40299 agttataacatacaacatcacaacgcttgcaatccgctaacatgtgacccttctaaccacacctgaagcacttcttatcatct 40381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 247
Target Start/End: Original strand, 5794 - 5926
Alignment:
Q  115 accttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgatatctccacgcttgcattcagccaacacatgacctt 214  Q
    ||||||||||||| | ||||||  || |||||||| ||||||||| |||| ||||||||||| | ||| ||||||||||| ||||| ||    || ||||    
T  5794 accttcttaggtttcttgcactacgagctaatgtgtccctcttcatcacaattataacaaacaacatccccacgcttgcaatcagctaatgtgtgtcctt 5893  T
Q  215 tctgaccgcatctgaaacatttcttctcatctc 247  Q
    |||| || ||||||||||| ||||||| |||||    
T  5894 tctgtccacatctgaaacacttcttcttatctc 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 8619 - 8444
Alignment:
Q  70 gtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttat 169  Q
    |||||||||||||||||||| ||||| || || || || ||||| |||||||| |||||  ||||||| ||||| || ||||||| ||||   |||||||    
T  8619 gtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttat 8520  T
Q  170 aacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    ||||||| |  || ||||||||||| ||||| |     || || |||||||| || |||||||| |||||||||||    
T  8519 aacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatc 8444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 18833 - 18658
Alignment:
Q  70 gtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttat 169  Q
    |||||||||||||||||||| ||||| || || || || ||||| |||||||| |||||  ||||||| ||||| || ||||||| ||||   |||||||    
T  18833 gtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttat 18734  T
Q  170 aacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatc 245  Q
    ||||||| |  || ||||||||||| ||||| |     || || |||||||| || |||||||| |||||||||||    
T  18733 aacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatc 18658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 98731 - 98564
Alignment:
Q  79 gtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacga 178  Q
    |||||||||| |||||| ||||| || ||||| || |||||||| || || |||||||| ||||| || |||||||||||    ||||||||||| || |    
T  98731 gtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgtgtgcactgcgaactgatatggccctcttcgttgcagttataacatacaa 98632  T
Q  179 tatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
     ||| ||||||||||| ||||| |     || ||||||||||| || |||||||| ||||||||||||    
T  98631 catcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatct 98564  T

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Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 514516 - 514424
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctct 156  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||||||| |||||||| ||||  |  ||||||||||| || || ||||||    
T  514516 tcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacactgtgaactgatatgaccctct 514424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 9923 - 9808
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    ||||||||||||| |||||| ||||| || ||||| || |||||||| |||||||| || |||||||| || |||||||| |||   |||||||| ||||    
T  9923 tgcgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggttgcgtacattgtgaacttatatggccctcctcattgcagttatagcaaa 9824  T
Q  176 cgatatctccacgctt 191  Q
    | | |||||| |||||    
T  9823 caacatctccccgctt 9808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 15275 - 15349
Alignment:
Q  126 ttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgatatctccacgcttgcattcagc 200  Q
    |||||||||||||||||| || ||||||||||||   |||||||||||||| | ||| ||||||||||| |||||    
T  15275 ttgcgtgcactgtgaactgatatggccctcttcattgcagttataacaaacaacatcaccacgcttgcaatcagc 15349  T

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Target: scaffold2165 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 966 - 830
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    |||||||||| ||||||||||||||| ||||| ||||| || | |||||| |||||||| ||||  |  ||||| |||||||| || |||||| ||   |    
T  966 tcattggtagactgcgtaccagtcaatgcaaacaccttgcccctagttctaaccttcttcggttcaggacactgcgaactaatatgaccctctccatttc 867  T
Q  164 agttataacaaacgatatctccacgcttgcattcagc 200  Q
    ||||||| || || || || |||||||| ||||||||    
T  866 agttatagcagacaatgtccccacgcttacattcagc 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 1770 - 1678
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctct 156  Q
    |||||||||||||||||||||||||| ||||| || || || |||||||| |||||||| ||||  |  ||||||||||| || || ||||||    
T  1770 tcattggtagtctgcgtaccagtcaatgcaaacactttgcccccagttctaaccttcttcggttcgggacactgtgaactgatatgaccctct 1678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 246
Target Start/End: Original strand, 8761 - 8937
Alignment:
Q  70 gtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttat 169  Q
    ||||| |||||||||||||| ||||| || || || || || || |||||||| ||||| |||||||| ||||| || ||||| |||||    ||||| |    
T  8761 gtagtatgcgtaccagtcaatgcaaacactttcccaccggtactaaccttcttcggttgagtgcactgcgaactgatatggccttcttcgttgcagttgt 8860  T
Q  170 aacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    | ||||| || || ||||||||||| ||||| |     || ||||||||||| || |||||||| ||||||||||||    
T  8861 agcaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatct 8937  T

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Target: scaffold0146 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 435 - 311
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||||||||| ||||| || || || || |||||||| |||||||| || || |||||||| || || || |||   |||||||||||||    
T  435 tgcgtaccagtcaaagcaaacaccttgccaccggtcctaaccttcttcggttgcgtacattgcgaactaatatgaccttcctcattgcagttataacaaa 336  T
Q  176 cgatatctccacgcttgcattcagc 200  Q
    | || || |||||||| || |||||    
T  335 caatgtccccacgcttacaatcagc 311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 247
Target Start/End: Original strand, 16794 - 16961
Alignment:
Q  80 taccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaacgat 179  Q
    |||||| ||| | ||||||||| || || || || ||||||||||  ||||| ||||| |||||||| || || || |||  |||||| || ||||| ||    
T  16794 taccagacaacgaaaataccttgccacctgtcctaaccttcttagtctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaat 16893  T
Q  180 atctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    ||| ||||||||||| ||||||||    || ||||||||||| || || || || |||||||||||||    
T  16894 atccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctc 16961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 247
Target Start/End: Original strand, 50258 - 50429
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||||||||| ||||| || || || || ||||||||||| || || ||||  ||||| || || || || |||   ||||| || ||||    
T  50258 tgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgggtacactacgaactgatatgaccttcctcattgcagttgtagcaaa 50357  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    | ||||| |||||||| || ||||| ||    || ||||||||||| || |||||||| |||||||||||||    
T  50358 caatatccccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcatctc 50429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 5012 - 4830
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||   |||||||||||| || ||||| || ||||| |||||| | || || || ||||| | ||| || |||||||| ||    |    
T  5012 tcattagtagtctgcgtcatagtcaaagcaaacacttttccaccggttctaaccttcctcggctgtgtacactgagtactgatatggccctcctcgttgc 4913  T
Q  164 agttataacaaacgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatct 246  Q
    |||||||||| || | ||| ||||||||||| ||||| ||||  ||||| ||||| || || ||||| || ||||||||||||    
T  4912 agttataacatacaacatcaccacgcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctcatct 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 17647 - 17553
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttc 158  Q
    ||||| |||||||||||||||||||||||||| |  || || |||||||| |||||||| || || || ||||| | ||| || |||||||||||    
T  17647 tcattagtagtctgcgtaccagtcaaagcaaacattttcccaccagttctaaccttcttcggctgtgtacactgagtactgatatggccctcttc 17553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 30075 - 30133
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttctt 122  Q
    ||||||||||||||||||||| |||| ||||| |||||||| ||| |||| ||||||||    
T  30075 tcattggtagtctgcgtaccaatcaatgcaaacacctttccaccatttctaaccttctt 30133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 194
Target Start/End: Original strand, 22263 - 22393
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||| ||||||||||| ||||| ||  | ||  | ||||| |||||||| || || |||||||| ||||| || ||||||||||||   |    
T  22263 tcattagtagtctgagtaccagtcaatgcaaacactataccaacggttctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgc 22362  T
Q  164 agttataacaaacgatatctccacgcttgca 194  Q
    ||||||| ||||| | ||| |||||||||||    
T  22363 agttatagcaaacaacatcaccacgcttgca 22393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 1650 - 1514
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccac 163  Q
    ||||| |||||||||||||||||||| ||||| || || ||||| || ||||||||||| || || || ||||| ||||| || || || ||||||   |    
T  1650 tcattagtagtctgcgtaccagtcaatgcaaacactttccctccggtcctgaccttcttcggctgagtacactgcgaactgatatgaccttcttcattgc 1551  T
Q  164 agttataacaaacgatatctccacgcttgcattcagc 200  Q
    |||| || ||||| || || |||| ||| ||||||||    
T  1550 agttgtagcaaacaatgtccccacacttacattcagc 1514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 2784 - 2908
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    ||||||||||||| |||||| || || || || ||||| |||||||| ||||| |  ||||||||||| || |||||||| |||   |||||||| ||||    
T  2784 tgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaa 2883  T
Q  176 cgatatctccacgcttgcattcagc 200  Q
    | || ||||| ||||| || |||||    
T  2884 ctatgtctccccgcttacaatcagc 2908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 43570 - 43446
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||||||||| ||||| || || || |  |||||||| || | | ||||||| || ||||| || ||||||||| |||| ||||| ||||    
T  43570 tgcgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttcttgcactgcgagctaatatgaccctcttcatcacaattatagcaaa 43471  T
Q  176 cgatatctccacgcttgcattcagc 200  Q
    | | ||| |||||||| || |||||    
T  43470 caacatccccacgcttacaatcagc 43446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 1034 - 910
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||| ||||||||||| ||||| || ||||| || |||||||| |||||||| ||||| ||||| || || || || |||   ||||||||| |||    
T  1034 tgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcagttataataaa 935  T
Q  176 cgatatctccacgcttgcattcagc 200  Q
    | || || |||||||| || |||||    
T  934 caatgtccccacgcttacaatcagc 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 51802 - 51898
Alignment:
Q  74 tctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttata 170  Q
    |||||||||||||||||| ||| ||||| || || || |  |||||||| || ||||| |||||||||||||| |  || |||||| ||||||||||    
T  51802 tctgcgtaccagtcaaagtaaacaccttgccacctgtccgaaccttctttggctgcgtacactgtgaactaatattaccttcttcatcacagttata 51898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 1028 - 961
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaact 143  Q
    |||||||||||||||||||| ||||| || ||||| || |||||||| ||||| || ||||| |||||    
T  1028 tgcgtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgtgtacactgcgaact 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 1173 - 1074
Alignment:
Q  77 gcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaac 176  Q
    ||||||||||||||||||| ||||| || ||||||  | |||||||||| | | ||||||| |||||||| || || |||||   ||||||||| |||||    
T  1173 gcgtaccagtcaaagcaaaaaccttcccaccagtttgggccttcttaggcttcttgcactgcgaactaatatgaccttcttccttacagttatagcaaac 1074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 247
Target Start/End: Original strand, 5593 - 5764
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||| ||||| || || || || || || ||||||||||||||||| ||||| ||||| || || || ||||||  ||| || || ||||    
T  5593 tgcgtaccagtcaacgcaaacactttgccacctgtcctaaccttcttaggttgcgtacactgcgaactgatatgaccttcttcattacaattgtagcaaa 5692  T
Q  176 cgatatctccacgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctc 247  Q
    | | ||| |||||||| || ||||| ||    || ||||||||||| || || || || |||||||||||||    
T  5693 caacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcatctc 5764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 11902 - 11857
Alignment:
Q  68 tggtagtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    ||||||| |||||||||||||||||||| ||||| || ||||||||    
T  11902 tggtagtttgcgtaccagtcaaagcaaacaccttcccaccagttct 11857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 67271 - 67213
Alignment:
Q  64 tcattggtagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttctt 122  Q
    ||||||||||||||| |||||||||| ||||| || ||||| |||||||| ||| ||||    
T  67271 tcattggtagtctgcataccagtcaatgcaaacacttttccaccagttctaaccctctt 67213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 11978 - 12102
Alignment:
Q  73 gtctgcgtaccagtcaaagcaaatacctttcctccagttctga-ccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataa 171  Q
    ||||||||||||||||| ||||| |||||||| || | ||||| |||||||||| | | ||||||| |||||||  || || |||||  |||| ||  |     
T  11978 gtctgcgtaccagtcaatgcaaacacctttccacctg-tctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgtcacaattgaag 12076  T
Q  172 caaacgatatctccacgcttgcattc 197  Q
    ||||| ||||| ||||||||||||||    
T  12077 caaacaatatcaccacgcttgcattc 12102  T

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Target: scaffold0310 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 11125 - 11254
Alignment:
Q  71 tagtctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttata 170  Q
    ||||||||||||||||||| ||||| ||||| ||||| || ||  ||||||| || || || |||||||| || || || |||||||||   ||||| ||    
T  11125 tagtctgcgtaccagtcaacgcaaacaccttccctccggtcctagccttcttcggctgagtacactgtgagctgatatgaccctcttcattgcagttgta 11224  T
Q  171 acaaacgatatctccacgcttgcattcagc 200  Q
     || || || || |||||||| ||||||||    
T  11225 gcagacaatgtccccacgcttacattcagc 11254  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 41884 - 41925
Alignment:
Q  72 agtctgcgtaccagtcaaagcaaatacctttcctccagttct 113  Q
    |||||||||||||||||||||||| |||||||| ||| ||||    
T  41884 agtctgcgtaccagtcaaagcaaacacctttcccccaattct 41925  T

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Target: scaffold0848 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 5152 - 5080
Alignment:
Q  74 tctgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaat 146  Q
    |||||||||||||||||||||| ||||| || |||||   | |||||||||| | | |||||| |||||||||    
T  5152 tctgcgtaccagtcaaagcaaaaaccttcccaccagtctgggccttcttaggcttcttgcactttgaactaat 5080  T

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Target: scaffold0309 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 12880 - 13004
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    ||||||||||| || ||||| ||||| || || || || ||||||||||| ||||| ||||| ||||| || || || ||||||  |||||| || ||||    
T  12880 tgcgtaccagttaacgcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgtagcaaa 12979  T
Q  176 cgatatctccacgcttgcattcagc 200  Q
    | | ||| |||||||| || |||||    
T  12980 caacatccccacgcttacaatcagc 13004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 37092 - 37216
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||| ||||||| ||| ||||| || ||||| || |||||||| || ||||| ||||||||||| || || || || |||   |||||||| ||||    
T  37092 tgcgtaccggtcaaagaaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactgatatgaccttcctcattgcagttatagcaaa 37191  T
Q  176 cgatatctccacgcttgcattcagc 200  Q
    | ||||| |||| ||| || |||||    
T  37192 caatatccccacacttacaatcagc 37216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 34490 - 34590
Alignment:
Q  76 tgcgtaccagtcaaagcaaatacctttcctccagttctgaccttcttaggttgcgtgcactgtgaactaatgtggccctcttcaccacagttataacaaa 175  Q
    |||||||||||||| ||||| |||||||| || || || |||||||| || ||||| ||||  |||||||| || || || |||   |||||||||||||    
T  34490 tgcgtaccagtcaaggcaaacacctttccacctgtcctaaccttcttcggctgcgtacactacgaactaatatgaccttcctcattgcagttataacaaa 34589  T
Q  176 c 176  Q
    |    
T  34590 c 34590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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