View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0678_high_13 (Length: 317)

Name: NF0678_high_13
Description: NF0678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0678_high_13
NF0678_high_13
[»] scaffold1403 (1 HSPs)
scaffold1403 (53-297)||(555-798)
[»] chr1 (31 HSPs)
chr1 (59-297)||(16368165-16368402)
chr1 (99-297)||(41049953-41050152)
chr1 (59-293)||(50613994-50614229)
chr1 (59-293)||(50621822-50622057)
chr1 (59-293)||(50686620-50686855)
chr1 (132-297)||(26064943-26065109)
chr1 (99-297)||(21896173-21896372)
chr1 (133-297)||(16758654-16758820)
chr1 (134-284)||(16093836-16093988)
chr1 (60-297)||(21861449-21861686)
chr1 (201-288)||(35261100-35261185)
chr1 (201-283)||(20454574-20454655)
chr1 (233-296)||(22921921-22921983)
chr1 (233-297)||(21754051-21754114)
chr1 (233-296)||(20248286-20248348)
chr1 (186-283)||(20918623-20918719)
chr1 (233-288)||(33681021-33681076)
chr1 (236-282)||(14295606-14295652)
chr1 (233-286)||(38801440-38801492)
chr1 (233-286)||(45574940-45574992)
chr1 (224-283)||(34509799-34509857)
chr1 (224-283)||(50210257-50210315)
chr1 (237-288)||(52928026-52928077)
chr1 (233-283)||(20847207-20847256)
chr1 (234-288)||(22237641-22237695)
chr1 (249-286)||(21533940-21533977)
chr1 (224-283)||(21026699-21026757)
chr1 (240-283)||(22123171-22123214)
chr1 (224-283)||(27250773-27250831)
chr1 (225-283)||(20958127-20958184)
chr1 (201-286)||(16381197-16381281)
[»] scaffold0022 (2 HSPs)
scaffold0022 (59-297)||(78327-78564)
scaffold0022 (53-293)||(128842-129082)
[»] chr3 (39 HSPs)
chr3 (59-297)||(37251046-37251284)
chr3 (58-297)||(22110229-22110468)
chr3 (157-297)||(606302-606442)
chr3 (139-293)||(43925967-43926123)
chr3 (133-287)||(52523678-52523835)
chr3 (148-285)||(12377938-12378077)
chr3 (233-296)||(9512927-9512989)
chr3 (233-296)||(9520902-9520964)
chr3 (233-296)||(49668128-49668190)
chr3 (233-297)||(32307683-32307746)
chr3 (233-296)||(12174311-12174373)
chr3 (225-283)||(28194709-28194767)
chr3 (134-288)||(15470938-15471092)
chr3 (233-296)||(16103787-16103849)
chr3 (238-297)||(53070755-53070813)
chr3 (133-240)||(2051150-2051260)
chr3 (233-283)||(13210379-13210429)
chr3 (236-286)||(13919345-13919394)
chr3 (234-296)||(16097335-16097396)
chr3 (231-288)||(15246032-15246088)
chr3 (224-283)||(12399228-12399286)
chr3 (224-283)||(20698479-20698537)
chr3 (59-144)||(43927291-43927375)
chr3 (221-283)||(11424800-11424861)
chr3 (221-283)||(14572608-14572669)
chr3 (233-283)||(23274706-23274756)
chr3 (233-283)||(24340775-24340825)
chr3 (237-283)||(27165266-27165312)
chr3 (261-293)||(23318793-23318825)
chr3 (224-288)||(26686901-26686964)
chr3 (224-283)||(13442293-13442351)
chr3 (224-283)||(14972873-14972931)
chr3 (224-283)||(18438553-18438611)
chr3 (224-283)||(23083405-23083463)
chr3 (224-283)||(42386429-42386487)
chr3 (233-283)||(14234506-14234556)
chr3 (256-286)||(43550598-43550628)
chr3 (237-283)||(53301607-53301653)
chr3 (231-288)||(15265153-15265209)
[»] chr2 (36 HSPs)
chr2 (59-297)||(23207282-23207520)
chr2 (99-293)||(23791282-23791478)
chr2 (62-288)||(25108901-25109128)
chr2 (132-297)||(20520143-20520309)
chr2 (132-297)||(22413086-22413254)
chr2 (132-293)||(24697556-24697719)
chr2 (148-297)||(23004753-23004904)
chr2 (99-297)||(7650-7849)
chr2 (99-297)||(18786820-18787019)
chr2 (230-297)||(32451978-32452045)
chr2 (133-283)||(19671849-19671999)
chr2 (201-286)||(23287379-23287463)
chr2 (157-283)||(7679604-7679729)
chr2 (224-283)||(298858-298917)
chr2 (133-296)||(23708570-23708734)
chr2 (233-286)||(20309124-20309177)
chr2 (233-286)||(26392398-26392450)
chr2 (233-296)||(28405983-28406045)
chr2 (221-283)||(38155-38216)
chr2 (233-286)||(23103448-23103500)
chr2 (224-283)||(23060532-23060590)
chr2 (224-283)||(23076461-23076519)
chr2 (224-283)||(23285884-23285942)
chr2 (233-296)||(25175857-25175919)
chr2 (233-283)||(22105428-22105477)
chr2 (233-282)||(22731287-22731335)
chr2 (220-283)||(8946676-8946738)
chr2 (233-296)||(22134259-22134320)
chr2 (224-283)||(22337134-22337192)
chr2 (234-293)||(39828047-39828105)
chr2 (233-283)||(23072001-23072051)
chr2 (229-283)||(23654435-23654488)
chr2 (225-286)||(9241942-9242002)
chr2 (238-283)||(23040247-23040291)
chr2 (225-282)||(34136960-34137016)
chr2 (225-293)||(19202020-19202087)
[»] chr4 (28 HSPs)
chr4 (59-293)||(53082030-53082264)
chr4 (53-288)||(46640328-46640563)
chr4 (60-297)||(12288089-12288326)
chr4 (133-297)||(52243145-52243312)
chr4 (133-297)||(13802-13967)
chr4 (230-297)||(6190467-6190534)
chr4 (233-296)||(12774014-12774076)
chr4 (233-283)||(15551836-15551886)
chr4 (236-286)||(17046503-17046553)
chr4 (237-297)||(43198611-43198671)
chr4 (233-283)||(39706340-39706390)
chr4 (201-286)||(17333293-17333377)
chr4 (224-283)||(3096312-3096370)
chr4 (224-283)||(7088896-7088954)
chr4 (224-283)||(7798793-7798851)
chr4 (233-296)||(8846363-8846425)
chr4 (224-283)||(12902776-12902834)
chr4 (224-283)||(52873411-52873469)
chr4 (233-283)||(16377574-16377623)
chr4 (256-297)||(21815704-21815745)
chr4 (134-286)||(26050428-26050579)
chr4 (240-283)||(3515023-3515065)
chr4 (224-283)||(23374403-23374461)
chr4 (231-286)||(26045344-26045398)
chr4 (231-293)||(14825477-14825538)
chr4 (222-283)||(6899910-6899970)
chr4 (221-282)||(16270276-16270336)
chr4 (233-286)||(22353849-22353901)
[»] scaffold0080 (1 HSPs)
scaffold0080 (59-297)||(19763-20001)
[»] chr8 (49 HSPs)
chr8 (99-293)||(24353029-24353224)
chr8 (59-293)||(17266871-17267106)
chr8 (59-288)||(37116361-37116591)
chr8 (132-288)||(17439456-17439614)
chr8 (99-229)||(22364734-22364865)
chr8 (133-297)||(20498567-20498732)
chr8 (99-297)||(983323-983522)
chr8 (222-293)||(19154928-19154999)
chr8 (186-286)||(5866280-5866379)
chr8 (233-288)||(23760896-23760951)
chr8 (233-283)||(6520387-6520437)
chr8 (233-283)||(17140935-17140985)
chr8 (233-283)||(21491014-21491064)
chr8 (233-283)||(38855303-38855353)
chr8 (237-286)||(16199700-16199749)
chr8 (233-286)||(21396032-21396085)
chr8 (233-286)||(21790525-21790578)
chr8 (133-283)||(13597568-13597719)
chr8 (133-283)||(17612061-17612212)
chr8 (233-296)||(26355750-26355812)
chr8 (148-283)||(21285616-21285751)
chr8 (236-286)||(21389505-21389555)
chr8 (236-286)||(21778831-21778881)
chr8 (234-283)||(13508138-13508187)
chr8 (225-286)||(20502146-20502206)
chr8 (201-286)||(22525574-22525658)
chr8 (222-283)||(22626755-22626815)
chr8 (222-283)||(31971276-31971336)
chr8 (233-286)||(45131049-45131101)
chr8 (224-283)||(7372797-7372855)
chr8 (224-283)||(18818453-18818511)
chr8 (224-283)||(18879275-18879333)
chr8 (224-283)||(21919044-21919102)
chr8 (224-283)||(23406398-23406456)
chr8 (234-293)||(28397559-28397617)
chr8 (233-283)||(21923981-21924030)
chr8 (231-293)||(22995852-22995913)
chr8 (233-283)||(28649097-28649146)
chr8 (256-297)||(19801500-19801541)
chr8 (224-283)||(6759277-6759335)
chr8 (224-283)||(16092386-16092444)
chr8 (224-283)||(20536227-20536285)
chr8 (233-283)||(21249403-21249454)
chr8 (233-283)||(21255241-21255292)
chr8 (253-283)||(4483297-4483327)
chr8 (134-180)||(14103177-14103223)
chr8 (161-229)||(40492831-40492901)
chr8 (238-275)||(20533467-20533503)
chr8 (234-283)||(21673723-21673772)
[»] scaffold0420 (2 HSPs)
scaffold0420 (59-293)||(6161-6396)
scaffold0420 (236-293)||(13793-13850)
[»] scaffold0005 (2 HSPs)
scaffold0005 (99-297)||(267665-267864)
scaffold0005 (231-293)||(14171-14232)
[»] scaffold0737 (1 HSPs)
scaffold0737 (99-297)||(1715-1914)
[»] chr5 (34 HSPs)
chr5 (59-293)||(22178098-22178333)
chr5 (99-297)||(20026858-20027057)
chr5 (148-296)||(26012002-26012150)
chr5 (135-297)||(22144054-22144217)
chr5 (233-283)||(21502208-21502258)
chr5 (249-297)||(27988997-27989045)
chr5 (148-249)||(29448055-29448158)
chr5 (201-286)||(15796435-15796519)
chr5 (237-293)||(26740702-26740757)
chr5 (233-296)||(22959584-22959646)
chr5 (233-283)||(19660887-19660937)
chr5 (233-283)||(21329549-21329599)
chr5 (236-286)||(36314593-36314643)
chr5 (225-286)||(23469819-23469879)
chr5 (201-282)||(41861475-41861555)
chr5 (233-281)||(26732885-26732932)
chr5 (233-296)||(21565549-21565611)
chr5 (231-293)||(21328266-21328327)
chr5 (233-286)||(37723919-37723972)
chr5 (224-283)||(8286887-8286945)
chr5 (224-283)||(21729108-21729166)
chr5 (224-283)||(21808433-21808491)
chr5 (224-283)||(21997578-21997636)
chr5 (233-286)||(21293022-21293074)
chr5 (233-297)||(21731514-21731576)
chr5 (233-297)||(21809634-21809696)
chr5 (224-283)||(23390540-23390598)
chr5 (224-283)||(24529239-24529297)
chr5 (224-283)||(25421551-25421609)
chr5 (221-283)||(13025330-13025391)
chr5 (221-283)||(13095514-13095575)
chr5 (221-283)||(24493588-24493649)
chr5 (224-282)||(25431414-25431471)
chr5 (256-289)||(20902128-20902161)
[»] scaffold0218 (1 HSPs)
scaffold0218 (60-297)||(7956-8190)
[»] scaffold0006 (2 HSPs)
scaffold0006 (53-293)||(97014-97255)
scaffold0006 (53-293)||(106292-106533)
[»] chr7 (40 HSPs)
chr7 (59-293)||(20220068-20220300)
chr7 (132-293)||(1867945-1868107)
chr7 (132-297)||(15008449-15008615)
chr7 (148-293)||(14044755-14044902)
chr7 (148-293)||(14354785-14354932)
chr7 (99-288)||(12901337-12901527)
chr7 (133-296)||(2280070-2280234)
chr7 (167-274)||(14036282-14036391)
chr7 (167-274)||(14346312-14346421)
chr7 (222-293)||(48991189-48991260)
chr7 (134-283)||(67764-67911)
chr7 (133-280)||(12255742-12255892)
chr7 (233-287)||(28505350-28505404)
chr7 (186-283)||(34200805-34200901)
chr7 (186-286)||(16495418-16495517)
chr7 (201-293)||(18203821-18203912)
chr7 (233-296)||(811183-811245)
chr7 (233-296)||(18005653-18005715)
chr7 (233-296)||(44014185-44014247)
chr7 (233-283)||(11996079-11996129)
chr7 (222-283)||(12698850-12698910)
chr7 (233-286)||(13647341-13647393)
chr7 (233-286)||(27847882-27847935)
chr7 (233-286)||(40443407-40443460)
chr7 (224-283)||(3564408-3564466)
chr7 (233-288)||(16219769-16219824)
chr7 (224-283)||(16386291-16386350)
chr7 (221-283)||(38227500-38227561)
chr7 (237-283)||(47831826-47831872)
chr7 (225-293)||(9033391-9033458)
chr7 (235-283)||(10063872-10063920)
chr7 (237-297)||(16056333-16056393)
chr7 (225-293)||(20619389-20619456)
chr7 (239-297)||(15144096-15144154)
chr7 (233-283)||(9509208-9509257)
chr7 (241-283)||(17062019-17062061)
chr7 (222-283)||(18456454-18456514)
chr7 (234-283)||(22072932-22072981)
chr7 (225-286)||(38519388-38519448)
chr7 (225-286)||(42461965-42462025)
[»] scaffold0139 (1 HSPs)
scaffold0139 (59-279)||(38339-38560)
[»] scaffold0123 (2 HSPs)
scaffold0123 (132-288)||(25120-25277)
scaffold0123 (114-229)||(609-725)
[»] scaffold0010 (3 HSPs)
scaffold0010 (148-297)||(60681-60832)
scaffold0010 (233-283)||(129924-129974)
scaffold0010 (225-286)||(663-723)
[»] scaffold0021 (4 HSPs)
scaffold0021 (148-289)||(136335-136477)
scaffold0021 (148-289)||(145043-145185)
scaffold0021 (233-286)||(174782-174835)
scaffold0021 (233-283)||(121785-121834)
[»] chr6 (39 HSPs)
chr6 (148-297)||(19668376-19668526)
chr6 (59-284)||(23076748-23076974)
chr6 (132-249)||(18696539-18696657)
chr6 (59-284)||(35008166-35008392)
chr6 (114-250)||(18706356-18706493)
chr6 (134-296)||(23019412-23019574)
chr6 (201-296)||(20109144-20109237)
chr6 (157-297)||(9098489-9098630)
chr6 (99-286)||(18199333-18199522)
chr6 (201-286)||(33443063-33443147)
chr6 (99-286)||(18177589-18177778)
chr6 (99-286)||(18204093-18204282)
chr6 (233-286)||(35245602-35245655)
chr6 (233-283)||(27333270-27333320)
chr6 (233-283)||(27394010-27394060)
chr6 (99-173)||(28103816-28103890)
chr6 (233-297)||(25644325-25644389)
chr6 (233-296)||(19652202-19652264)
chr6 (234-281)||(22831524-22831571)
chr6 (233-286)||(16920682-16920735)
chr6 (225-286)||(18453198-18453258)
chr6 (256-297)||(18456721-18456762)
chr6 (256-297)||(18461881-18461922)
chr6 (256-297)||(18821919-18821960)
chr6 (134-293)||(18896268-18896425)
chr6 (239-286)||(11185521-11185568)
chr6 (224-283)||(16496263-16496321)
chr6 (224-283)||(20361004-20361062)
chr6 (186-283)||(28496477-28496573)
chr6 (224-283)||(29060559-29060617)
chr6 (186-283)||(29808888-29808984)
chr6 (231-293)||(19362436-19362496)
chr6 (233-283)||(20076719-20076768)
chr6 (233-297)||(16493152-16493214)
chr6 (236-283)||(17287852-17287898)
chr6 (256-287)||(19303615-19303646)
chr6 (256-287)||(22080800-22080831)
chr6 (233-279)||(4185873-4185919)
chr6 (237-283)||(25656645-25656690)
[»] scaffold1351 (1 HSPs)
scaffold1351 (59-252)||(54-248)
[»] scaffold0357 (3 HSPs)
scaffold0357 (133-297)||(13133-13299)
scaffold0357 (133-297)||(16051-16216)
scaffold0357 (222-293)||(2670-2741)
[»] scaffold0138 (2 HSPs)
scaffold0138 (59-240)||(18116-18298)
scaffold0138 (233-288)||(12953-13008)
[»] scaffold0165 (1 HSPs)
scaffold0165 (133-297)||(27700-27865)
[»] scaffold0090 (1 HSPs)
scaffold0090 (201-293)||(2684-2776)
[»] scaffold0034 (2 HSPs)
scaffold0034 (99-296)||(32542-32738)
scaffold0034 (230-297)||(51933-51999)
[»] scaffold0413 (1 HSPs)
scaffold0413 (201-297)||(12573-12667)
[»] scaffold0040 (1 HSPs)
scaffold0040 (201-297)||(103651-103747)
[»] scaffold2014 (1 HSPs)
scaffold2014 (201-297)||(1037-1131)
[»] scaffold0075 (1 HSPs)
scaffold0075 (133-297)||(53500-53665)
[»] scaffold0106 (4 HSPs)
scaffold0106 (233-286)||(1305-1358)
scaffold0106 (233-286)||(7282-7335)
scaffold0106 (254-293)||(19718-19757)
scaffold0106 (231-281)||(15289-15338)
[»] scaffold0032 (1 HSPs)
scaffold0032 (233-286)||(51598-51651)
[»] scaffold0628 (1 HSPs)
scaffold0628 (233-296)||(2858-2920)
[»] scaffold0621 (2 HSPs)
scaffold0621 (233-296)||(6542-6604)
scaffold0621 (201-288)||(8480-8565)
[»] scaffold0261 (1 HSPs)
scaffold0261 (186-283)||(15680-15776)
[»] scaffold0102 (1 HSPs)
scaffold0102 (233-296)||(19271-19333)
[»] scaffold0046 (4 HSPs)
scaffold0046 (186-283)||(11311-11407)
scaffold0046 (186-283)||(2016-2112)
scaffold0046 (224-283)||(28433-28491)
scaffold0046 (246-283)||(4571-4608)
[»] scaffold0023 (4 HSPs)
scaffold0023 (233-296)||(100381-100443)
scaffold0023 (233-283)||(119894-119944)
scaffold0023 (233-296)||(40226-40288)
scaffold0023 (233-296)||(101506-101568)
[»] scaffold0008 (1 HSPs)
scaffold0008 (233-296)||(14749-14811)
[»] scaffold0556 (1 HSPs)
scaffold0556 (233-287)||(6827-6881)
[»] scaffold0456 (1 HSPs)
scaffold0456 (233-283)||(10475-10525)
[»] scaffold0184 (1 HSPs)
scaffold0184 (186-286)||(1075-1174)
[»] scaffold0598 (1 HSPs)
scaffold0598 (233-286)||(1101-1154)
[»] scaffold0351 (1 HSPs)
scaffold0351 (233-286)||(16298-16351)
[»] scaffold0001 (3 HSPs)
scaffold0001 (233-299)||(160685-160753)
scaffold0001 (231-293)||(497435-497496)
scaffold0001 (256-287)||(85699-85730)
[»] scaffold0111 (2 HSPs)
scaffold0111 (225-293)||(7440-7507)
scaffold0111 (225-293)||(14559-14626)
[»] scaffold0014 (1 HSPs)
scaffold0014 (201-281)||(206545-206624)
[»] scaffold1984 (1 HSPs)
scaffold1984 (148-296)||(136-283)
[»] scaffold0555 (1 HSPs)
scaffold0555 (233-288)||(10593-10648)
[»] scaffold0461 (1 HSPs)
scaffold0461 (133-275)||(11491-11634)
[»] scaffold0207 (1 HSPs)
scaffold0207 (233-296)||(2697-2759)
[»] scaffold0124 (1 HSPs)
scaffold0124 (133-275)||(38207-38350)
[»] scaffold0100 (1 HSPs)
scaffold0100 (233-288)||(23935-23990)
[»] scaffold1765 (1 HSPs)
scaffold1765 (233-283)||(1101-1151)
[»] scaffold0718 (1 HSPs)
scaffold0718 (236-286)||(5183-5233)
[»] scaffold0490 (1 HSPs)
scaffold0490 (224-286)||(1968-2029)
[»] scaffold0333 (2 HSPs)
scaffold0333 (233-283)||(6630-6680)
scaffold0333 (233-283)||(14010-14060)
[»] scaffold0278 (1 HSPs)
scaffold0278 (233-283)||(5662-5712)
[»] scaffold0243 (1 HSPs)
scaffold0243 (233-283)||(6175-6225)
[»] scaffold0120 (3 HSPs)
scaffold0120 (221-283)||(32997-33058)
scaffold0120 (221-283)||(45947-46008)
scaffold0120 (224-283)||(16132-16190)
[»] scaffold0072 (1 HSPs)
scaffold0072 (231-293)||(57827-57887)
[»] scaffold0042 (1 HSPs)
scaffold0042 (201-283)||(24324-24405)
[»] scaffold0028 (2 HSPs)
scaffold0028 (233-283)||(62217-62267)
scaffold0028 (238-296)||(132665-132722)
[»] scaffold0020 (2 HSPs)
scaffold0020 (233-283)||(15829-15879)
scaffold0020 (225-286)||(142597-142657)
[»] scaffold0011 (3 HSPs)
scaffold0011 (231-293)||(38202-38263)
scaffold0011 (234-283)||(51932-51980)
scaffold0011 (224-283)||(168022-168080)
[»] scaffold0540 (1 HSPs)
scaffold0540 (222-283)||(3192-3252)
[»] scaffold0503 (1 HSPs)
scaffold0503 (256-297)||(11968-12009)
[»] scaffold0427 (1 HSPs)
scaffold0427 (222-283)||(13516-13576)
[»] scaffold0107 (1 HSPs)
scaffold0107 (225-286)||(36196-36256)
[»] scaffold0064 (1 HSPs)
scaffold0064 (233-286)||(47011-47064)
[»] scaffold0031 (1 HSPs)
scaffold0031 (256-297)||(20497-20538)
[»] scaffold0078 (1 HSPs)
scaffold0078 (60-295)||(10534-10768)
[»] scaffold0013 (1 HSPs)
scaffold0013 (225-293)||(30340-30407)
[»] scaffold0908 (1 HSPs)
scaffold0908 (224-283)||(3230-3288)
[»] scaffold0530 (1 HSPs)
scaffold0530 (236-283)||(1089-1136)
[»] scaffold0507 (1 HSPs)
scaffold0507 (133-297)||(8010-8177)
[»] scaffold0476 (1 HSPs)
scaffold0476 (99-283)||(12785-12969)
[»] scaffold0347 (1 HSPs)
scaffold0347 (226-293)||(8899-8964)
[»] scaffold0175 (1 HSPs)
scaffold0175 (186-283)||(34142-34238)
[»] scaffold0125 (1 HSPs)
scaffold0125 (233-296)||(45844-45906)
[»] scaffold0122 (1 HSPs)
scaffold0122 (224-283)||(26109-26167)
[»] scaffold0056 (2 HSPs)
scaffold0056 (224-283)||(17261-17319)
scaffold0056 (256-297)||(79403-79444)
[»] scaffold0037 (1 HSPs)
scaffold0037 (237-288)||(22726-22777)
[»] scaffold2080 (1 HSPs)
scaffold2080 (225-279)||(805-858)
[»] scaffold0150 (1 HSPs)
scaffold0150 (238-296)||(32105-32162)
[»] scaffold0141 (1 HSPs)
scaffold0141 (221-283)||(39496-39557)
[»] scaffold0113 (1 HSPs)
scaffold0113 (233-283)||(32086-32135)
[»] scaffold0049 (1 HSPs)
scaffold0049 (221-283)||(75255-75316)
[»] scaffold0247 (1 HSPs)
scaffold0247 (238-283)||(18084-18129)
[»] scaffold0108 (1 HSPs)
scaffold0108 (225-286)||(3273-3333)
[»] scaffold0088 (1 HSPs)
scaffold0088 (234-283)||(20929-20978)
[»] scaffold0211 (1 HSPs)
scaffold0211 (233-296)||(28821-28884)
[»] scaffold1842 (1 HSPs)
scaffold1842 (224-283)||(1092-1150)
[»] scaffold0403 (1 HSPs)
scaffold0403 (224-283)||(4868-4926)
[»] scaffold0358 (1 HSPs)
scaffold0358 (224-283)||(4731-4789)
[»] scaffold0193 (1 HSPs)
scaffold0193 (224-283)||(13230-13288)
[»] scaffold0016 (1 HSPs)
scaffold0016 (224-283)||(1870-1928)
[»] scaffold0561 (1 HSPs)
scaffold0561 (134-180)||(10595-10641)
[»] scaffold0356 (1 HSPs)
scaffold0356 (134-180)||(614-660)
[»] scaffold0074 (1 HSPs)
scaffold0074 (237-283)||(38758-38804)
[»] scaffold0047 (1 HSPs)
scaffold0047 (231-293)||(22287-22348)
[»] scaffold0003 (1 HSPs)
scaffold0003 (222-283)||(339990-340049)
[»] scaffold1419 (1 HSPs)
scaffold1419 (99-180)||(145-226)
[»] scaffold0396 (1 HSPs)
scaffold0396 (225-282)||(1914-1970)
[»] scaffold0293 (1 HSPs)
scaffold0293 (233-286)||(17518-17570)
[»] scaffold0282 (1 HSPs)
scaffold0282 (225-286)||(18212-18272)
[»] scaffold0145 (1 HSPs)
scaffold0145 (221-282)||(32962-33022)
[»] scaffold0114 (1 HSPs)
scaffold0114 (222-283)||(15505-15565)
[»] scaffold0012 (2 HSPs)
scaffold0012 (225-286)||(221251-221311)
scaffold0012 (133-195)||(225512-225576)
[»] scaffold1539 (1 HSPs)
scaffold1539 (225-285)||(955-1014)


Alignment Details
Target: scaffold1403 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 53 - 297
Target Start/End: Complemental strand, 798 - 555
Alignment:
Q  53 atcatagggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtat 152  Q
    |||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  798 atcatatggtaagaaactaagttgtttatctaactgttgttgttt-cagtaagcctgaattatatgatttgatcttttaaataatatgatattaatgtat 700  T
Q  153 atgtattacatgaattatatatgatgttgggatgttgttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgt 252  Q
    ||| |||||||||||||||||||||||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  699 atgcattacatgaattatatatgatgttgggatgttgttgatttgcattgatattgttatatcatgaactgttttatatgctgcctatgttgctgtttgt 600  T
Q  253 ttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  599 ttattaactaagctgcatgagtcggtctaagatgaattatgatgt 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 59 - 297
Target Start/End: Original strand, 16368165 - 16368402
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||| |||||||||||||| |||||||       ||||||||||||||||||||||||||| |  | ||||||||||||| |||||||||| ||    
T  16368165 gggtaagaaattaagttgtttatcttactgttgttgttt-cagtaagcctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcat 16368263  T
Q  159 tacatgaattatatatgatgttgggatgttgttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatta 258  Q
    ||||||||||||| | ||||||| |||||||||||||| || ||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  16368264 tacatgaattataaacgatgttgagatgttgttgatttgcattgatattgttatatcatgaattgttttatatgctgcctatgttgctgtttgtttatta 16368363  T
Q  259 actaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16368364 actaagctgcatgagtcggtctaagatgaatgatgatgt 16368402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 99 - 297
Target Start/End: Original strand, 41049953 - 41050152
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttac 198  Q
    ||||||||||||||||||||||||||  |  | |||||||||||||   |||||||| ||||| ||||||||||||||||||| |||||||||||||| |    
T  41049953 cagtaagcctgaattatatgatttgacgttgttaataatgtgatatatttgtatatgcattacttgaattatatatgatgttgagatgttgttgatttgc 41050052  T
Q  199 aat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | | |||||| |||||| ||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  41050053 atttgatattgttatatcatgaactattttatatactgcctatgttgctgttcgtttagtaactaagctgcatgagtcggtctaagatgaaggatgatgt 41050152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 59 - 293
Target Start/End: Original strand, 50613994 - 50614229
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    ||||||||||||||||||||| ||| || ||||       ||||||||||||||||||||||||||| |    | ||||||||||| |||||||||| ||    
T  50613994 gggtaagaaactaagttgtttgtcttaccgttgttactt-cagtaagcctgaattatatgatttgatgttgatattaatgtgatataaatgtatatgcat 50614092  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    ||||||||||||| | |||||| | |||||||||||||| || | |||||| |||||| |||||||||||||| | ||||||||||||||||||||||||    
T  50614093 tacatgaattataaaagatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgctgtttgtttat 50614192  T
Q  257 taactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||||||||||||||||||||| ||||    
T  50614193 taactaagctgcatgagtcggtctaagatgaaggatg 50614229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 59 - 293
Target Start/End: Original strand, 50621822 - 50622057
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    ||||||||||||||||||||| ||| || ||||       ||||||||||||||||||||||||||| |    | ||||||||||| |||||||||| ||    
T  50621822 gggtaagaaactaagttgtttgtcttaccgttgttactt-cagtaagcctgaattatatgatttgatgttgatattaatgtgatataaatgtatatgcat 50621920  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    ||||||||||||| | |||||| | |||||||||||||| || | |||||| |||||| |||||||||||||| | ||||||||||||||||||||||||    
T  50621921 tacatgaattataaaagatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgctgtttgtttat 50622020  T
Q  257 taactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||||||||||||||||||||| ||||    
T  50622021 taactaagctgcatgagtcggtctaagatgaaggatg 50622057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 59 - 293
Target Start/End: Complemental strand, 50686855 - 50686620
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       ||||||||||||||||||||||  ||| |  | ||||||||||||| |||||||||| ||    
T  50686855 gggtaagaaactaagttgcttatcttactgttgttgttt-cagtaagcctgaattatatgatccgatgttgttaataatgtgatataaatgtatatgcat 50686757  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    |||||||||||||||||||||| | |||||||||||||| || | || ||| |||||| ||||||| ||||||   ||||||||||||| ||||||||||    
T  50686756 tacatgaattatatatgatgtttgagatgttgttgatttgcatttgacattgttatatcatgaactattttatgaactgcctatgttgccgtttgtttat 50686657  T
Q  257 taactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  50686656 taactaaactgcatgagtcggtctaagatgaaagatg 50686620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 297
Target Start/End: Complemental strand, 26065109 - 26064943
Alignment:
Q  132 aataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttata 230  Q
    |||||||||||||   |||||||||||||| ||||||||||||||| || | |||||||||||||| || || |||| |||||| ||||| | ||||||     
T  26065109 aataatgtgatatatttgtatatgtattacttgaattatatatgatctttgagatgttgttgatttgcattggtattgttatatcatgaattattttatg 26065010  T
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| ||||||||    
T  26065009 tactgcctatgttgctgtttgtttatcaactaagctgcatgagttggtctatgatgaaagatgatgt 26064943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 297
Target Start/End: Original strand, 21896173 - 21896372
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgattt 196  Q
    ||||||||||||||  ||||||||||| |  |  |||||||||||| | |||||||  |||||||||||||||||||| |||| | ||||||| ||| ||    
T  21896173 cagtaagcctgaatattatgatttgatgttgtttataatgtgatataattgtatatacattacatgaattatatatgaatgtttgagatgttgatgactt 21896272  T
Q  197 acaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgat 295  Q
     || | |||||| |||||| |||  ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||    
T  21896273 gcatttgatattgttatatcatg--ctgttttgtatactgcctatgttgctgtttgtttattaactaagttgcatgagtcggtctaagatgaaggaagat 21896370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 133 - 297
Target Start/End: Complemental strand, 16758820 - 16758654
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttata 230  Q
    |||||||||||| | |||||||| ||||| |||||||||||||| ||||| ||||||||||  ||  | | |||||| |||||| |||||||| |||  |    
T  16758820 ataatgtgatataattgtatatgcattacttgaattatatatgaatgttgtgatgttgttgtattgtatttgatattgttatatcatgaactggtttgca 16758721  T
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | |||||||||||||||||||||  ||||||||| |||||||||||||||||| |||| ||||||||    
T  16758720 tactgcctatgttgctgtttgttatttaactaagttgcatgagtcggtctaagttgaaagatgatgt 16758654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 284
Target Start/End: Original strand, 16093836 - 16093988
Alignment:
Q  134 taatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgtt-gatttacaatgatatttttatattatgaactgttttatat 231  Q
    |||||||||||   |||||||  |||||||||||||  ||||||||| | ||||||||| ||||| || ||||||| |||||| |||| ||||||| |||    
T  16093836 taatgtgatatatttgtatatacattacatgaattacctatgatgtttgagatgttgtttgatttgcattgatattgttatatcatgagctgttttctat 16093935  T
Q  232 gctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaaga 284  Q
     |||||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  16093936 actgcctatgttgctatttgtttattaactatgttgcatgagtcggtctaaga 16093988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 60 - 297
Target Start/End: Original strand, 21861449 - 21861686
Alignment:
Q  60 ggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtatt 159  Q
    ||||||||||||||||||||||||  || |||       ||||||||||||||  |||||| |||| |  |  |||||||||||| | |||||||  |||    
T  21861449 ggtaagaaactaagttgtttatcttgctattgttgttt-cagtaagcctgaatattatgatatgatgttgtttataatgtgatataattgtatatacatt 21861547  T
Q  160 acatgaattatatatga-tgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    || |||||||||||||| |||| | ||||||| ||| || || | |||||| |||||| |||  |||||||  || ||||||||||||||||||||||||    
T  21861548 acttgaattatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatg--ctgttttgcatactgcctatgttgctgtttgtttat 21861645  T
Q  257 taactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    || ||||||||||||||||||||||||||||| || |||||    
T  21861646 tagctaagctgcatgagtcggtctaagatgaaagaagatgt 21861686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 35261100 - 35261185
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    ||||||| |||||| |||  |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35261100 tgatattgttatatcatg--ctgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 35261185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 20454574 - 20454655
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| |||||  |||| ||||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  20454574 tgatattgttataccatgagctgttttatgtgctgcctatgttgctg-ttgttatttaactaagctgcatgagtcggtctaag 20454655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 22921921 - 22921983
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  22921921 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatg-atgatgatg 22921983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 21754114 - 21754051
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||| || ||||||||||    
T  21754114 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatgt 21754051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 20248348 - 20248286
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||||||| || |||||||||    
T  20248348 ctgcctatgttgttgtttgttttttaactaagttgcatgagtcggtctaagttg-atgatgatg 20248286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 20918719 - 20918623
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| | |||||| |||||| ||||  || |||  || ||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  20918719 gttgttgatttacattcgatattattatatcatga--tggtttgcatactgcctatgttgcagtttgttatttaactaagctgcatgagtcggtctaag 20918623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 33681076 - 33681021
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||| ||||    
T  33681076 ctgcctatgttgctgtttgttatttaactaagttgcatgagtcggtctaagttgaa 33681021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 14295606 - 14295652
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaa 282  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  14295606 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaa 14295652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 38801440 - 38801492
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  38801440 ctgcctatgttgctgtttgttatttaactaagctgcatgagtc-gtctaagatg 38801492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 45574940 - 45574992
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  45574940 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagatg 45574992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 34509857 - 34509799
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  34509857 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 34509799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 50210257 - 50210315
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  50210257 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 50210315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 52928026 - 52928077
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||| ||||    
T  52928026 ctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgaa 52928077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 20847207 - 20847256
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  20847207 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 20847256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 22237695 - 22237641
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    ||||||||| ||||||||||  ||||||||||| |||||||||||||||| ||||    
T  22237695 tgcctatgtcgctgtttgttatttaactaagcttcatgagtcggtctaagttgaa 22237641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 21533940 - 21533977
Alignment:
Q  249 ttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  21533940 ttgtttagtaactaagctgcatgagtcggtctaagatg 21533977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 21026757 - 21026699
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||| |||||||| |||  ||||||||||||||||||||||||||||    
T  21026757 ttttgtatactgcctatattgctgtt-gttatttaactaagctgcatgagtcggtctaag 21026699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 22123171 - 22123214
Alignment:
Q  240 tgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| |  ||||||||||||||||||||||||||||    
T  22123171 tgttgctgtttgctatttaactaagctgcatgagtcggtctaag 22123214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 27250773 - 27250831
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||||| || |||  ||||||||||||||||||||||||||||    
T  27250773 ttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtctaag 27250831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 20958184 - 20958127
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||| ||||||||||||||||| |||| |||||| ||| ||| |||||||||||||||    
T  20958184 tttatgtgctgcctatgttgctg-ttgtatattaattaaactggatgagtcggtctaag 20958127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 16381281 - 16381197
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||| |||||| ||||  |||||||| || || ||||| |||||||| || ||| | |||| |||||||||||||||||||||    
T  16381281 tgatattgttatatcatgagttgttttatgtgatgtctatgctgctgtttatt-attgattaagttgcatgagtcggtctaagatg 16381197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 141; Significance: 6e-74; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 59 - 297
Target Start/End: Complemental strand, 78564 - 78327
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    ||||||| |||||||||| |||||| |||||||       ||||||||||||||||||||||||||| |  | ||||||||||||| |||||||||| ||    
T  78564 gggtaagcaactaagttgcttatcttactgttgttgttt-cagtaagcctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcat 78466  T
Q  159 tacatgaattatatatgatgttgggatgttgttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatta 258  Q
    ||||||||||||| | ||||||| |||||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  78465 tacatgaattataaacgatgttgagatgttgttgatttgcattgatattgttatatcatgaactgttttatatgctgcctatgttgctgtttgtttatta 78366  T
Q  259 actaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  78365 actaagctgcatgagtcggtccaagatgaatgaagatgt 78327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 53 - 293
Target Start/End: Original strand, 128842 - 129082
Alignment:
Q  53 atcatagggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtat 152  Q
    ||||| |||||||||||||||||| |||||| |||||||       |||||||||||| ||| |||||||||| |  | |||||||||||||   |||||    
T  128842 atcatggggtaagaaactaagttgcttatcttactgttgttgttt-cagtaagcctgatttagatgatttgatgttgttaataatgtgatatatttgtat 128940  T
Q  153 atgtattacatgaattatatatgatg-ttgggatgttgttgatttaca-atgatatttttatattatgaactgttttatatgctgcctatgttgctgttt 250  Q
    ||  |||||||||||||||||||||| ||| |||||||||||||| ||  ||||||| |||||| ||||| |||||||| | ||||||||||||||||||    
T  128941 atccattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaattgttttatgtactgcctatgttgctgttt 129040  T
Q  251 gtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    | |||||||||||||||||||||||||||||||||||| ||||    
T  129041 g-ttattaactaagctgcatgagtcggtctaagatgaaagatg 129082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 9e-70; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 59 - 297
Target Start/End: Original strand, 37251046 - 37251284
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    ||||||||||||||||||||||||| |||||||       ||||||| ||||||||||||||||||| |  | ||||||||||||| |||||||||| ||    
T  37251046 gggtaagaaactaagttgtttatcttactgttgttgttc-cagtaagtctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcat 37251144  T
Q  159 tacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatt 257  Q
    |||||||||||| |||||||||| |||||||||||||| || | |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  37251145 tacatgaattatttatgatgttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatatactgcctatgttgctgtttgtttatt 37251244  T
Q  258 aactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||| ||||||||||||| | ||||||||    
T  37251245 aactaagctgcatgactcggtctaagatggaagatgatgt 37251284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 58 - 297
Target Start/End: Original strand, 22110229 - 22110468
Alignment:
Q  58 agggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgta 157  Q
    ||||||||||||||||||| |||||| |||||||       ||||||||||||||| ||||||||||  |  | ||||||||||||| |||||||| | |    
T  22110229 agggtaagaaactaagttgcttatcttactgttgttgttt-cagtaagcctgaattgtatgatttgaagttgttaataatgtgatataaatgtatacgca 22110327  T
Q  158 ttacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    ||||||||||| |||||||||||| |||| ||||||||| || | |||||| |||||| |||||||||||||| | ||||||||||||||||||||||||    
T  22110328 ttacatgaattctatatgatgttgagatgctgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgctgtttgtttat 22110427  T
Q  257 taactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  22110428 taactaagctgcatgagtcggtctaagatgaaggatgatgt 22110468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 606302 - 606442
Alignment:
Q  157 attacatgaattatatatgatgttgggatgttgttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    |||||||||||| |||||||||||| ||||||||||| || || ||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  606302 attacatgaattctatatgatgttgagatgttgttgaattgcattgatattgttatatcatgaactgatttatgtgctgcctatgttgctgtttgtttat 606401  T
Q  257 taactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  606402 taactaagctgcatgagtcggtataagatgaatgatgatgt 606442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 139 - 293
Target Start/End: Complemental strand, 43926123 - 43925967
Alignment:
Q  139 tgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgc 236  Q
    |||||| |||||||||| |||||||||||| ||||||||||| | |||||||||||||| || | |||||| |||||| |||| ||||||||| | ||||    
T  43926123 tgatataaatgtatatgcattacatgaattgtatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgagctgttttatgtactgc 43926024  T
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43926023 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaaagatg 43925967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 133 - 287
Target Start/End: Original strand, 52523678 - 52523835
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| ||||| |||||||||||||| |||| | |||||||||||||| || | |||||| |||||| ||||||||||||      
T  52523678 ataatgtgatataattgtatatgcattacttgaattatatatgaatgtttgagatgttgttgatttgcattcgatattgttatatcatgaactgttttgc 52523777  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatga 287  Q
    || |||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  52523778 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatga 52523835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 285
Target Start/End: Complemental strand, 12378077 - 12377938
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgc 245  Q
    |||||||||||||  |||||||| || ||||||   | |||||||||||| || | |||||| |||||| |||| || |||||||| |||||||||||||    
T  12378077 tgtatatgtattatttgaattatttaagatgtttaagttgttgttgatttgcatttgatattgttatatcatgagctattttatatactgcctatgttgc 12377978  T
Q  246 tgtttgtttattaactaagctgcatgagtcggtctaagat 285  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  12377977 tgtttgtctattaactaagctgtatgagtcggtctaagat 12377938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 9512989 - 9512927
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  9512989 ctgcctatgttgctgtttgttgtttaactaagctgcatgagtcggtctaagatg-atgatgatg 9512927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 9520964 - 9520902
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  9520964 ctgcctatgttgctgtttgttgtttaactaagctgcatgagtcggtctaagatg-atgatgatg 9520902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 49668128 - 49668190
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  49668128 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatg-atgatgatg 49668190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 32307746 - 32307683
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||||||    
T  32307746 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatgt 32307683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 12174311 - 12174373
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  12174311 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 12174373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 28194767 - 28194709
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  28194767 tttatgtgctgtctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 28194709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 134 - 288
Target Start/End: Complemental strand, 15471092 - 15470938
Alignment:
Q  134 taatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatat 231  Q
    |||||| |||| | |||||||  |||||||||||||| | ||||||| | ||||||| ||| || || | |||||| |||||| ||||  || |||  ||    
T  15471092 taatgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgatgacttgcattcgatattgttatatcatga--tgatttgcat 15470995  T
Q  232 gctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
     |||||||||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  15470994 actgcctatgttgctgtctgttatttaactaagctgcatgagtcggtctaagttgaa 15470938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 16103849 - 16103787
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||| || |||||||||    
T  16103849 ctgcctatgttgctgttcgttgtttaactaagctgcatgagtcggtctaagttg-atgatgatg 16103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 53070755 - 53070813
Alignment:
Q  238 tatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||||| ||||||||    
T  53070755 tatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagatgaaggatgatgt 53070813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 240
Target Start/End: Original strand, 2051150 - 2051260
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatg-atg-ttgggatgttgttgatttaca-atgatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| ||||| ||||||||||||| ||| ||| |||||||||||||| ||  ||||||| |||||| ||||||||||||      
T  2051150 ataatgtgatataattgtatatgcattacttgaattatatatgaatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttgc 2051249  T
Q  230 atgctgcctat 240  Q
    || ||||||||    
T  2051250 atactgcctat 2051260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 13210379 - 13210429
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  13210379 ctgcctatgttgctatttgttatttaactaagctgcatgagtcggtctaag 13210429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 13919394 - 13919345
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  13919394 cctatgttgctgtt-gtttattaactaagctgcatgagtcggtctatgatg 13919345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 16097396 - 16097335
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  16097396 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 16097335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 15246088 - 15246032
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    ||||||||||||||||||| || |||||| ||| ||||||||||||||||||||||||    
T  15246088 tgctgcctatgttgctgtt-gtctattaattaaactgcatgagtcggtctaagatgaa 15246032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 12399286 - 12399228
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  12399286 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 12399228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 20698479 - 20698537
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  20698479 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 20698537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 43927375 - 43927291
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatat 144  Q
    |||||||||||||||||| |||||| |||||||       ||||||||||||||||||||||||||| |  | |||||||||||||    
T  43927375 gggtaagaaactaagttgcttatcttactgttgttgttt-cagtaagcctgaattatatgatttgatgttgttaataatgtgatat 43927291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 11424800 - 11424861
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| ||||||||||||||||| |||  |||||||||||||||||||| |||||||    
T  11424800 ctgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcagtctaag 11424861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 14572669 - 14572608
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| ||| ||||||||||||| |||  ||||||||||||||||||||||||||||    
T  14572669 ctgttttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 14572608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 23274756 - 23274706
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||||| ||||| |||||||||| |||||||||| |||||||    
T  23274756 ctgcctatgttgctgattgttaattaactaagttgcatgagtcagtctaag 23274706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 24340775 - 24340825
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| |||||||||| ||||| ||||||||||||||||||||| |||||||    
T  24340775 ctgcatatgttgctgattgttaattaactaagctgcatgagtcagtctaag 24340825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 27165312 - 27165266
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||    
T  27165312 ctatattgctgtttgttatttaactaagctgcatgagtcggtctaag 27165266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 293
Target Start/End: Original strand, 23318793 - 23318825
Alignment:
Q  261 taagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||||||||||||||||||||||    
T  23318793 taagctgcatgagtcggtctaagatgaatgatg 23318825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 26686964 - 26686901
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||| ||| |||||||||||| |||| |||  |||||||||||||||||||||||||||| ||||    
T  26686964 ttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgaa 26686901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 13442351 - 13442293
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  13442351 ttttgtatactgcctatgttgccgtt-gttatttaactaagctgcatgagtcggtctaag 13442293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 14972931 - 14972873
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||| |||||||||| |||  ||||||||||||||||||||||||||||    
T  14972931 ttttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 14972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 18438611 - 18438553
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||| ||||||||||||||||    
T  18438611 ttttgtatactgcctatgttgctgtt-gttatttaactaagctacatgagtcggtctaag 18438553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 23083405 - 23083463
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||||| || |||  ||||||||||||||||||||||||||||    
T  23083405 ttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtctaag 23083463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 42386487 - 42386429
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  42386487 ttttgtatactgcctatgttgctgtt-gttatttaactaaactgcatgagtcggtctaag 42386429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 14234556 - 14234506
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||||| |||||  ||||||||||||||||| || |||||||    
T  14234556 ctgcctatgttgctgcttgttatttaactaagctgcatgaatcagtctaag 14234506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 286
Target Start/End: Original strand, 43550598 - 43550628
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||||||||||||||||||    
T  43550598 ttaactaagctgcatgagtcggtctaagatg 43550628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 53301607 - 53301653
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||  ||||||||| || |||||||||||||||    
T  53301607 ctatgttgctgtttgttatttaactaagttgtatgagtcggtctaag 53301653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 15265209 - 15265153
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    ||||||||||||||||||| || |||||| ||| || || ||||||||||||||||||    
T  15265209 tgctgcctatgttgctgtt-gtctattaattaaactacacgagtcggtctaagatgaa 15265153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 6e-68; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 59 - 297
Target Start/End: Complemental strand, 23207520 - 23207282
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||        |||||||||||||||||||||||||| |  | ||||||||||||| |||||||||| ||    
T  23207520 gggtaagaaactaagttgcttatcttactgttgttgttca-agtaagcctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcat 23207422  T
Q  159 tacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatt 257  Q
    |||||||||||| ||| |||||| ||||| |||||||| || | |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  23207421 tacatgaattatttataatgttgagatgtcgttgatttgcatttgatattgttatatcatgaactgttttatatactgcctatgttgctgtttgtttatt 23207322  T
Q  258 aactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  23207321 aactaagctgcatgagtcggtctaagatgaaagatgatgt 23207282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 99 - 293
Target Start/End: Complemental strand, 23791478 - 23791282
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgattta 197  Q
    ||||||||||||||||||||||||||| |  | ||||||||||||| |||||||||| |||||||||||||||||| ||||| | ||||||||||||||     
T  23791478 cagtaagcctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaattatatataatgtttgagatgttgttgatttg 23791379  T
Q  198 caat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    || | ||||||||||||| |||||||||||||| | |||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  23791378 catttgatatttttatatcatgaactgttttatgtactgcctatgttgttgtttgcttattaactaagctacatgagtcggtctaagatgaaagatg 23791282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 62 - 288
Target Start/End: Complemental strand, 25109128 - 25108901
Alignment:
Q  62 taagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattac 161  Q
    ||||||||||||||| |||||| |||||||       ||||||||||||||||||||||||||| |  | |||||| |||||| |||||||||| |||||    
T  25109128 taagaaactaagttgcttatcttactgttgttgttt-cagtaagcctgaattatatgatttgatgttgttaataatatgatataaatgtatatgcattac 25109030  T
Q  162 atgaattatatatgatgttgg-gatgttgttgattta-caatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaa 259  Q
    ||||||||||||||||||| | ||| ||||||||||  |  ||||||| |||||| ||||||| |||||| | |||||||||||| ||||||||||||||    
T  25109029 atgaattatatatgatgtttgagatattgttgattttgctttgatattgttatatcatgaactattttatgtactgcctatgttgttgtttgtttattaa 25108930  T
Q  260 ctaagctgcatgagtcggtctaagatgaa 288  Q
    ||||||| |||||||||||||||||||||    
T  25108929 ctaagctacatgagtcggtctaagatgaa 25108901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 132 - 297
Target Start/End: Original strand, 20520143 - 20520309
Alignment:
Q  132 aataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttata 230  Q
    |||||||||||||   |||||||| ||||| |||||||||||||||||| | |||||||||||||| || ||||||| |||||| ||||||||||||||     
T  20520143 aataatgtgatatatttgtatatgcattacttgaattatatatgatgtttgagatgttgttgatttgcattgatattgttatatcatgaactgttttatg 20520242  T
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  20520243 tactgcatatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaaagataatgt 20520309  T

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Target: chr2; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 132 - 297
Target Start/End: Original strand, 22413086 - 22413254
Alignment:
Q  132 aataatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttacaat---gatatttttatattatgaactgtttta 228  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||| || |    ||||| |||||| |||| ||||||||    
T  22413086 aataatgtgatataaatgtatatgcattacatgaattatttatgatgttgagatgttgttgatttgcatttgatatattgttatatcatgagctgtttta 22413185  T
Q  229 tatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  22413186 tatactgcctatgttgttgtttgtttattaactaagttgcatgagtcggtctaagatgaaagatgatgt 22413254  T

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Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 132 - 293
Target Start/End: Original strand, 24697556 - 24697719
Alignment:
Q  132 aataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||| ||| | ||||||||||| || || | |||||| |||||| ||||||||||| ||    
T  24697556 aataatgtgatataaatgtatatgcattacatgaattgtatatgaagtttgagatgttgttgaattgcatttgatattgttatatcatgaactgtttgat 24697655  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
     | ||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  24697656 gtactgcctacgttgttgtttgtttattaactatgttgcatgagtcggtctaagatgaaagatg 24697719  T

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Target: chr2; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 148 - 297
Target Start/End: Complemental strand, 23004904 - 23004753
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgc 245  Q
    |||||||| ||||  || ||||||||||||||| | |||||||||||||| || | |||||| ||||||  |||||| |||||| | || ||||||||||    
T  23004904 tgtatatgcattatgtggattatatatgatgtttgagatgttgttgatttgcatttgatattattatatcctgaactattttatgtactacctatgttgc 23004805  T
Q  246 tgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  23004804 tgtttgtttattaactaagctgcatgagtcggtttaagatgaaagatgatgt 23004753  T

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Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 99 - 297
Target Start/End: Original strand, 7650 - 7849
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgattt 196  Q
    |||||||||||||||||||||||| || |  |   ||||||||||| | |||||||  ||||| |||||||||||||| |||| | ||||||| ||| ||    
T  7650 cagtaagcctgaattatatgatttaatgttgttgttaatgtgatataattgtatatacattacttgaattatatatgaatgtttgagatgttgatgactt 7749  T
Q  197 acaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgat 295  Q
     || | |||||| |||||| |||   ||||||  || |||||||||||||||||||||||||||||||||||||||| || |||||||||||| || |||    
T  7750 gcatttgatattgttatatcatgt--tgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatgattcagtctaagatgaaagaagat 7847  T

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Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 297
Target Start/End: Original strand, 18786820 - 18787019
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttac 198  Q
    |||||||||| ||||||||||||  || |  |  ||||||| ||||   |||||||  |||||||||||||| | |||||||| || |||||||| || |    
T  18786820 cagtaagcctaaattatatgattgaatgttattgataatgttatatagttgtatatacattacatgaattatgtttgatgttgtgacgttgttgaattgc 18786919  T
Q  199 aat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | | || ||| |||||| |||||||| |||  || || |||||||| ||| |||||  |||||||||||||||||||||||||||| |||| ||||||||    
T  18786920 atttgagattgttatatcatgaactggtttgcatactacctatgttactgattgttatttaactaagctgcatgagtcggtctaagttgaaagatgatgt 18787019  T

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Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 32451978 - 32452045
Alignment:
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||||||| |  ||||| |||||||||||||||||||||||| |||||||||||    
T  32451978 atgctgcctatgttgctgtttgatgtttaaccaagctgcatgagtcggtctaagataaatgatgatgt 32452045  T

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Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 283
Target Start/End: Complemental strand, 19671999 - 19671849
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttata 230  Q
    |||||||||||| | |||||||| ||||| |||||||||| ||| | ||| ||||||||| | || |  | |||||| |||||| ||||  ||||||  |    
T  19671999 ataatgtgatataattgtatatgcattacttgaattatatgtgaatattgagatgttgtttacttgcgttcgatattattatatcatga--tgttttgca 19671902  T
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    | ||||||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  19671901 tactgcctatgttgctgattgttaattaactaagctgcatgagtcagtctaag 19671849  T

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Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 23287463 - 23287379
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||| ||||||  |||  |||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  23287463 tgatattgttatatcttgagatgttttatgtactgcctatgttgctgtt-gtttattaactaagctgcatgagtcggtctatgatg 23287379  T

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Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 283
Target Start/End: Complemental strand, 7679729 - 7679604
Alignment:
Q  157 attacatgaattatatatgatgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgttta 255  Q
    |||||||||||||| | |||||||   ||||||| ||| ||||| ||||||| |||||| ||||  || |||  || |||||||||||||||||||||      
T  7679729 attacatgaattatgtttgatgtttatgatgttgatgacttacattgatattgttatatcatga--tgatttgcatactgcctatgttgctgtttgttat 7679632  T
Q  256 ttaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||| |||||||    
T  7679631 ttaactaagctgcatgagtcagtctaag 7679604  T

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Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 298858 - 298917
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  298858 ttttgtatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 298917  T

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Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 23708570 - 23708734
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| ||||| |||||||||| ||| |||| | ||||| | |||||| |||| |||||| |||||| |||   ||||||      
T  23708570 ataatgtgatataattgtatatgcattacttgaattatatttgaatgtttgagatgtcgatgatttgcaattgatattgttatatcatgt--tgttttgc 23708667  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    || |||||||||||||| | ||||  ||||||||||||| |||||||||||||| |||| |||||||    
T  23708668 atactgcctatgttgctatctgttatttaactaagctgcttgagtcggtctaagttgaaagatgatg 23708734  T

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Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 20309177 - 20309124
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  20309177 ctgcctatgttgctatttgttatttaactaagctgcatgagtcggtctaagatg 20309124  T

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Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 26392450 - 26392398
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  26392450 ctgcctatgttgctgtt-gtttattaactaagctgcatgagtcggtctatgatg 26392398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 28406045 - 28405983
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||| || |||||||||    
T  28406045 ctgcctatgttgctgtttgttatttaactaagttgcatgagtcggtctaagttg-atgatgatg 28405983  T

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Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 38155 - 38216
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  38155 ctgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 38216  T

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Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 23103448 - 23103500
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  23103448 ctgcctatgttgctgtttttat-ttaactaagctgcatgagtcggtctaagatg 23103500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 23060590 - 23060532
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  23060590 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 23060532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 23076519 - 23076461
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  23076519 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 23076461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 23285942 - 23285884
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  23285942 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 23285884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 25175919 - 25175857
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  ||||||||||||||||| || ||||||| || |||||||||    
T  25175919 ctgcctatgttgctgtttgttatttaactaagctgcatgaatctgtctaagttg-atgatgatg 25175857  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 22105477 - 22105428
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  22105477 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 22105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 22731287 - 22731335
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaa 282  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  22731287 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaa 22731335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 8946738 - 8946676
Alignment:
Q  220 actgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||| ||| |||||||||||||| || |||   |||||||||||||||||||||||||||    
T  8946738 actgttttgtatactgcctatgttgctatt-gttatctaactaagctgcatgagtcggtctaag 8946676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 22134259 - 22134320
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||  | | |||||||||||||||||||||||||| |||| |||||||||    
T  22134259 ctgcctatgttgctgttgatat-ttaactaagctgcatgagtcggtctatgatg-atgatgatg 22134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 22337192 - 22337134
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||| | |||| |||||||||| |||  ||||||||||||||||||||||||||||    
T  22337192 ttttatatacagcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 22337134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 39828047 - 39828105
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||||| || |||||| ||||||||||| |||||| ||||||||| ||||    
T  39828047 tgcctatgttgctgtt-gtatattaattaagctgcatgtgtcggtttaagatgaaagatg 39828105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 23072001 - 23072051
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| |||| |||  |||||||||||||||||||||| |||||    
T  23072001 ctgcctatgttgttgttcgttatttaactaagctgcatgagtcggactaag 23072051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 23654435 - 23654488
Alignment:
Q  229 tatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||| || |||| |||  ||||||||||||||||||||||||||||    
T  23654435 tatgctgcctatgctgttgtt-gttatttaactaagctgcatgagtcggtctaag 23654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 9242002 - 9241942
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| ||||||||||||||||||| ||  ||| | ||||||||||| ||||||||||||||    
T  9242002 tttatgtgctgcctatgttgctgtt-gtaaattgattaagctgcatgtgtcggtctaagatg 9241942  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 23040247 - 23040291
Alignment:
Q  238 tatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||    
T  23040247 tatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 23040291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 34137016 - 34136960
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaa 282  Q
    ||||| || |||||||||||||||| || |||||| ||||||||||| ||||||||||    
T  34137016 tttatgtgttgcctatgttgctgtt-gtatattaattaagctgcatgtgtcggtctaa 34136960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 19202020 - 19202087
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||| || |||||||||||||||| || |||||| |||  |||| |||||||||||||||||| ||||    
T  19202020 tttatgtgttgcctatgttgctgtt-gtatattaattaaattgcacgagtcggtctaagatgaaagatg 19202087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 6e-65; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 59 - 293
Target Start/End: Original strand, 53082030 - 53082264
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       ||||||||||||||||||||||||||| |  | ||||||||||||| |||||||||| ||    
T  53082030 gggtaagaaactaagttgcttatcttactgttgttgttt-cagtaagcctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcat 53082128  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatt 257  Q
    |||||||||||||||||||||| | |||||| ||||||| |  ||||||| |||||| |||||||||||||| | |||| ||||||||||||||||||||    
T  53082129 tacatgaattatatatgatgtttgagatgttattgatttgctttgatattgttatatcatgaactgttttatgtactgcttatgttgctgtttgtttatt 53082228  T
Q  258 aactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||||||||||||||||||||||||||| ||||    
T  53082229 aactaagctgcatgagtcggtctaagatgaaagatg 53082264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 53 - 288
Target Start/End: Original strand, 46640328 - 46640563
Alignment:
Q  53 atcatagggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtat 152  Q
    ||||| |||||||||||||||||| |||||| ||||||        |||||| |||||||||||||||||||| |  | ||| ||||||||| |||||||    
T  46640328 atcatggggtaagaaactaagttgcttatcttactgtt-attgtttcagtaaacctgaattatatgatttgatgttgttaatgatgtgatataaatgtat 46640426  T
Q  153 atgtattacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttg 251  Q
    ||| ||||||||||||||||||||||||| |||||| ||||||| || | |||||| |||||| |||||||||||||||| ||| |||||||||||||||    
T  46640427 atgcattacatgaattatatatgatgttgagatgttattgattttcatttgatattgttatatcatgaactgttttatatactgtctatgttgctgtttg 46640526  T
Q  252 tttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||||||||||||||||||||||||||||||||||||    
T  46640527 tttattaactaagctgcatgagtcggtctaagatgaa 46640563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 297
Target Start/End: Original strand, 12288089 - 12288326
Alignment:
Q  60 ggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtatt 159  Q
    |||| |||||||||||||||||||  ||||||       |||||||||||||||||||||||| || |  |   |||||| ||||   |||||||  |||    
T  12288089 ggtaggaaactaagttgtttatcttgctgttgttgttt-cagtaagcctgaattatatgatttaatgttgttggtaatgttatatagttgtatatacatt 12288187  T
Q  160 acatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatta 258  Q
    ||||||||||| | |||||||| ||||||||||| || || | |||||| |||||| |||||||| |||  || |||||||||||||||||||||  |||    
T  12288188 acatgaattatgtttgatgttgtgatgttgttgaattgcatttgatattgttatatcatgaactggtttgcatactgcctatgttgctgtttgttattta 12288287  T
Q  259 actaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  12288288 actaagctgcatgagtcggtctaagttgaaagatgatgt 12288326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 52243145 - 52243312
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| ||||| || ||||||||||| |||| | ||||||||||| || || | |||||| |||||| |||||||| |||      
T  52243145 ataatgtgatataattgtatatgcattacttggattatatatgaatgtttgagatgttgttgaatttcatttgatattgttatatcatgaactgatttgc 52243244  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    || |||||||||||||||||||||  |||||||||||||||||||||||||||| |||| || |||||    
T  52243245 atactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgaaagaagatgt 52243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 13802 - 13967
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatgatg--ttgggatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||  ||||| ||||||||||||||    ||| ||||||| ||| || || | |||||| |||||| |||   ||||||      
T  13802 ataatgtgatataattgtatatacattacttgaattatatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgt--tgttttgc 13899  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13900 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaaagaagatgt 13967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 6190534 - 6190467
Alignment:
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||||| || ||||||||    
T  6190534 atgctgcctatgttgctgtttgatgtttaactaagctgcatgagtcggtctaagataaaagatgatgt 6190467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 12774076 - 12774014
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  12774076 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 12774014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 15551886 - 15551836
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  15551886 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 15551836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 17046553 - 17046503
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  17046553 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatg 17046503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 43198611 - 43198671
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| |||| || |||||    
T  43198611 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgaaagaagatgt 43198671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 39706340 - 39706390
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  39706340 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaag 39706390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 17333377 - 17333293
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||| ||||||  |||  |||||||| | ||| ||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  17333377 tgatattgttatatcttgagatgttttatgtactgtctatgttgctgtt-gtttattaactaagctgcatgagtcagtctatgatg 17333293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 3096370 - 3096312
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  3096370 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 3096312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 7088954 - 7088896
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  7088954 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 7088896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 7798851 - 7798793
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  7798851 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 7798793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 8846425 - 8846363
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  |||||||||||| || |||||||||||| || |||||||||    
T  8846425 ctgcctatgttgctgtttgttatttaactaagctgaataagtcggtctaagttg-atgatgatg 8846363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 12902834 - 12902776
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  12902834 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 12902776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 52873411 - 52873469
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  52873411 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 52873469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 16377574 - 16377623
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  16377574 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 16377623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 21815704 - 21815745
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  21815704 ttaactaagctgcacgagtcggtctaagatgaaggatgatgt 21815745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 286
Target Start/End: Original strand, 26050428 - 26050579
Alignment:
Q  134 taatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatg 232  Q
    |||||||||||   |||||||| ||||  || |||||||| ||||||    |||||||||||| || | |||||| ||||||  |||  |||||| | ||    
T  26050428 taatgtgatatatttgtatatgcattatgtggattatataagatgtttaagtgttgttgattttcatttgatattgttatatcttgagatgtttt-tgtg 26050526  T
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||| |||||||| || |||||||||||||||||||  ||||||||||||    
T  26050527 ctgcctattttgctgtt-gtatattaactaagctgcatgatccggtctaagatg 26050579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 3515065 - 3515023
Alignment:
Q  240 tgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  3515065 tgttgctgtt-gttttttaactaagctgcatgagtcggtctaag 3515023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 23374403 - 23374461
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||| ||||||    
T  23374403 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcgttctaag 23374461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 26045344 - 26045398
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||| |||||||| || |||||||||||||||||||  ||||||||||||    
T  26045344 tgctgcctattttgctgtt-gtatattaactaagctgcatgatccggtctaagatg 26045398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 14825538 - 14825477
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||| |||  || |||||| ||| |||||||||||||||||||||||| ||||    
T  14825538 tgctgcctatgttgttgtc-gtctattaattaaactgcatgagtcggtctaagatgaaagatg 14825477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 6899970 - 6899910
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||| ||| |||||||||||||| || |||  ||||||||| ||||||||||||||||||    
T  6899970 tgttttgtatactgcctatgttgctatt-gttatttaactaagatgcatgagtcggtctaag 6899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 16270276 - 16270336
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaa 282  Q
    ||||||| ||| |||||||||||||| || |||  |||| ||||||||||||||||||||||    
T  16270276 ctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagtcggtctaa 16270336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 22353901 - 22353849
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||| ||||||| |||  ||| |||||||||||||||||||||||||||    
T  22353901 ctgcctatgctgctgtt-gttatttacctaagctgcatgagtcggtctaagatg 22353849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 59 - 297
Target Start/End: Original strand, 19763 - 20001
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       |||||||| |||||||||||||||||| |  | ||||||||||||| |||||||||| ||    
T  19763 gggtaagaaactaagttgcttatcttactgttgttgttc-cagtaagcatgaattatatgatttgatgttattaataatgtgatataaatgtatatgcat 19861  T
Q  159 tacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatt 257  Q
    ||||||| |||| ||||||| || ||||||||||| || || | |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  19862 tacatgagttatttatgatgctgagatgttgttgaattgcatttgatattgttatatcatgaactgttttatatactgcctatgttgctgtttgtttatt 19961  T
Q  258 aactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    || |||||||||||||||||||||||||||| ||||||||    
T  19962 aattaagctgcatgagtcggtctaagatgaaagatgatgt 20001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 99 - 293
Target Start/End: Complemental strand, 24353224 - 24353029
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgattta 197  Q
    ||||||||||||||||||||||||||| |  | |||||| |||||| |||||||||| |||||||||||| |||| |||||| | ||||||||||||||     
T  24353224 cagtaagcctgaattatatgatttgatgttgttaataatatgatataaatgtatatgcattacatgaattgtatacgatgtttgagatgttgttgatttg 24353125  T
Q  198 caatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    || ||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24353124 cattgatattgttatatcatgaactgttttatgtactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaaagatg 24353029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 59 - 293
Target Start/End: Original strand, 17266871 - 17267106
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       |||| |||||||||||||||||||||| |  | ||||||||||||| |||||||||| ||    
T  17266871 gggtaagaaactaagttgcttatcttactgttgttgttt-cagtgagcctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcat 17266969  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    |||| ||||||||||||||||| | |||||||||||||| || | |||||| |||||| |||||| ||||||| | |||||||||||| |||||||||||    
T  17266970 tacaagaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaaccgttttatgtactgcctatgttgttgtttgtttat 17267069  T
Q  257 taactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||||||||||||||||||||| ||||    
T  17267070 taactaagctgcatgagtcggtctaagatgaaagatg 17267106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 59 - 288
Target Start/End: Complemental strand, 37116591 - 37116361
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       |||||||||||| ||| |||||||||| |  | |||||||||||||   |||||||| ||    
T  37116591 gggtaagaaactaagttgcttatcttactgttgttgttt-cagtaagcctgatttagatgatttgatgttgttaataatgtgatatatttgtatatgcat 37116493  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    |||||||||||||||||||||| | |||||||||||||| || | |||||| |||||| |||||||||||||| | ||||||||||||||||||||||||    
T  37116492 tacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgctgtttgtttat 37116393  T
Q  257 taactaagctgcatgagtcggtctaagatgaa 288  Q
    ||||||||||||||||||||||||||||||||    
T  37116392 taactaagctgcatgagtcggtctaagatgaa 37116361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 132 - 288
Target Start/End: Original strand, 17439456 - 17439614
Alignment:
Q  132 aataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||||   |||||||| |||||||||||||||||||||||| | |||||||||||||| || | |||||| |||||| ||||||||||||||    
T  17439456 aataatgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttat 17439555  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
     | |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  17439556 gtactgcctatgttgttgtttgtttattaactaagctgcatgagtcggactaagatgaa 17439614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 22364865 - 22364734
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatg-ttgggatgttgttgattta 197  Q
    ||||||||||||||||||||||||||| |  | ||||| ||||||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||||     
T  22364865 cagtaagcctgaattatatgatttgatgttgttaataaagtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttt 22364766  T
Q  198 caatgatatttttatattatgaactgttttat 229  Q
    |  ||||||| |||||| ||||||||||||||    
T  22364765 ctttgatattgttatatcatgaactgttttat 22364734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 297
Target Start/End: Complemental strand, 20498732 - 20498567
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||  ||||| |||||||||||||| |||| | ||||||| ||| || || | |||||| |||||| |||  || |||||     
T  20498732 ataatgtgatataattgtatatacattacttgaattatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatg--ctattttac 20498635  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  20498634 atactgcctatgttgctgtttgtttattaactaagttgcatgagtcggtctaagatgaaagaagatgt 20498567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 297
Target Start/End: Original strand, 983323 - 983522
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttac 198  Q
    ||||||| |||||||||||||||  || |  |  ||||||| ||||   |||||||  |||||||||||||| | |||||||| ||||||||||| || |    
T  983323 cagtaagtctgaattatatgattgaatgttgttgataatgttatatagctgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgc 983422  T
Q  199 aat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | | || ||| |||||| |||||||  |||  || ||||||||||||||| |||||  |||||||||||||||||||||||||||| |||| ||||||||    
T  983423 atttgagattgttatatcatgaacttgtttgcatactgcctatgttgctgattgttatttaactaagctgcatgagtcggtctaagttgaaagatgatgt 983522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 19154928 - 19154999
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19154928 tgttttatatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtttaagatgaaagatg 19154999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 186 - 286
Target Start/End: Original strand, 5866280 - 5866379
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaaga 284  Q
    |||||||||||||| | |||||| |||||| ||||  || |||  || |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  5866280 gttgttgatttacattcgatattattatatcatga--tggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaaga 5866377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 23760896 - 23760951
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  23760896 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgaa 23760951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 6520437 - 6520387
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  6520437 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 6520387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 17140985 - 17140935
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  17140985 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 17140935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 21491064 - 21491014
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  21491064 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 21491014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 38855303 - 38855353
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  38855303 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 38855353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 16199700 - 16199749
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  16199700 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatg 16199749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 21396032 - 21396085
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  21396032 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatg 21396085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 21790525 - 21790578
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  21790525 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatg 21790578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 283
Target Start/End: Original strand, 13597568 - 13597719
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatgatg--ttgggatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| ||||| |||||||||| |||    ||||||||||||| | || |  | |||||| |||||| ||||  ||||||      
T  13597568 ataatgtgatataattgtatatgcattacttgaattatatgtgaatatttgggatgttgtttacttgcgttcgatattattatatcatga--tgttttgc 13597665  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    || |||| |||||||||| ||||| ||||||||||||||||||||| |||||||    
T  13597666 attctgcttatgttgctgattgttaattaactaagctgcatgagtcagtctaag 13597719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 283
Target Start/End: Original strand, 17612061 - 17612212
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatgatg--ttgggatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| ||||| |||||||||| ||||   ||| ||||||||| | ||||    |||||| |||||| ||||  ||||||      
T  17612061 ataatgtgatataattgtatatgcattacttgaattatatgtgattatttgagatgttgtttacttacgtgcgatattattatatcatga--tgttttgc 17612158  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    || |||||||||||| || ||||| ||||||||||||||||||||| |||||||    
T  17612159 atactgcctatgttgttgattgttaattaactaagctgcatgagtcagtctaag 17612212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 26355750 - 26355812
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  26355750 ctgcctatgttgttgtttgttgtttaactaagctgcatgagtcggtctaagttg-atgatgatg 26355812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 21285751 - 21285616
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgc 245  Q
    |||||||  |||||||||| ||| | ||||||| | |||||||||||||| || | |||||| |||||| |||   ||||||  || ||||||||||||     
T  21285751 tgtatatacattacatgaactatgtttgatgtttgagatgttgttgatttgcatttgatattgttatatcatgt--tgttttgcatactgcctatgttgt 21285654  T
Q  246 tgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||  ||||| ||||||||||||||||||||||    
T  21285653 tgtttgttatttaacaaagctgcatgagtcggtctaag 21285616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 21389505 - 21389555
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  21389505 cctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatg 21389555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 21778831 - 21778881
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  21778831 cctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatg 21778881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 13508138 - 13508187
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  13508138 tgcctatgttgctgattgttaattaactaagctgcatgagtcagtctaag 13508187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 20502146 - 20502206
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| ||||||||||||||||||| || | |||| ||||||||||||||||||||||||||    
T  20502146 tttatgtgctgcctatgttgctgtt-gtatgttaattaagctgcatgagtcggtctaagatg 20502206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 22525658 - 22525574
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||| ||||||  |||  |||||||| | ||||||| |||| |||| ||||||||||||||||||||||||||||||| ||||    
T  22525658 tgatattgttatatcttgagatgttttatgtactgcctaagttgttgtt-gtttattaactaagctgcatgagtcggtctatgatg 22525574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 22626815 - 22626755
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  22626815 tgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 22626755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 31971336 - 31971276
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  31971336 tgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 31971276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 45131049 - 45131101
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  45131049 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagatg 45131101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 7372855 - 7372797
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  7372855 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 7372797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 18818453 - 18818511
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  18818453 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 18818511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 18879275 - 18879333
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  18879275 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 18879333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 21919044 - 21919102
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  21919044 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 21919102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 23406456 - 23406398
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  23406456 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 23406398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 28397617 - 28397559
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||||||| |||| || |||||| |||||||||||||||||||||||||||| ||||    
T  28397617 tgcctatgttgttgtt-gtctattaattaagctgcatgagtcggtctaagatgaaagatg 28397559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 21923981 - 21924030
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  21923981 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 21924030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 22995913 - 22995852
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||||||||||||||| || || ||| ||||||| |||||||||||||||||||| ||||    
T  22995913 tgctgcctatgttgctgtt-gtctagtaattaagctgtatgagtcggtctaagatgaaagatg 22995852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 28649097 - 28649146
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  28649097 ctgcctatgttgct-tttgttatttaactaagctgcatgagtcggtctaag 28649146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 19801500 - 19801541
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  19801500 ttaactaagctgcatgagccggtctaagatgaaggatgatgt 19801541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 6759335 - 6759277
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||| |||||||||| |||  ||||||||||||||||||||||||||||    
T  6759335 ttttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 6759277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 16092386 - 16092444
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||| |||||||||| |||  ||||||||||||||||||||||||||||    
T  16092386 ttttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 16092444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 20536285 - 20536227
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||| ||||| |||  ||||||||||||||||||||||||||||    
T  20536285 ttttgtatactgcctatgtttctgtt-gttatttaactaagctgcatgagtcggtctaag 20536227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 21249454 - 21249403
Alignment:
Q  233 ctgcctatgttgctgtttgtttatt-aactaagctgcatgagtcggtctaag 283  Q
    |||| ||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  21249454 ctgcttatgttgctatttttttatttaactaagctgcatgagtcggtctaag 21249403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 21255292 - 21255241
Alignment:
Q  233 ctgcctatgttgctgtttgtttatt-aactaagctgcatgagtcggtctaag 283  Q
    |||| ||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  21255292 ctgcttatgttgctatttttttatttaactaagctgcatgagtcggtctaag 21255241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 283
Target Start/End: Complemental strand, 4483327 - 4483297
Alignment:
Q  253 ttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||||||||||||    
T  4483327 ttattaactaagctgcatgagtcggtctaag 4483297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 14103177 - 14103223
Alignment:
Q  134 taatgtgatattaatgtatatgtattacatgaattatatatgatgtt 180  Q
    ||||||||||| | |||||| | ||||||||||||||||||||||||    
T  14103177 taatgtgatataattgtatacgcattacatgaattatatatgatgtt 14103223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 40492831 - 40492901
Alignment:
Q  161 catgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||| ||||||||| | |||||||||||||| || | |||||| |||||| ||||||||||||||    
T  40492831 catgaattatttatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttat 40492901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 20533467 - 20533503
Alignment:
Q  238 tatgttgctgtttgtttattaactaagctgcatgagtc 275  Q
    |||||||||||| |||||||||||||||||||||||||    
T  20533467 tatgttgctgtt-gtttattaactaagctgcatgagtc 20533503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 21673772 - 21673723
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||| ||||||||  ||||||| | ||||||||||||||||||    
T  21673772 tgcctatgttgttgtttgttatttaactatgatgcatgagtcggtctaag 21673723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 59 - 293
Target Start/End: Original strand, 6161 - 6396
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       ||||||||||||||||||||||||||| |  | | ||||||||||| |||||||||| ||    
T  6161 gggtaagaaactaagttgcttatctcactgttgttgttt-cagtaagcctgaattatatgatttgatgttgttattaatgtgatataaatgtatatgcat 6259  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    |||||||||||||||||||||| | |||||||||||||| || | |||||| | |||| |||| ||||||||||| ||||||||||||||||||||| ||    
T  6260 tacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgtcatatcatgagctgttttatatactgcctatgttgctgtttgttcat 6359  T
Q  257 taactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  6360 taactaagttgcatgagtcggtctaagatgaaagatg 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 13793 - 13850
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  13793 cctatgttgttgtttgttcattaactaagctgcatgagtcggtctaagatgaaagatg 13850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 99 - 297
Target Start/End: Complemental strand, 267864 - 267665
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttac 198  Q
    ||||||||||| || ||||||||||||    | ||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||| |    
T  267864 cagtaagcctggatgatatgatttgatggtgttaataatgtgatataaatgtatatgcattacatgaattatatatgatgttgagatattgttgatttgc 267765  T
Q  199 aat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | | |||||| |||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  267764 atttgatattgttatatcatgaactgttttatatactgcatatgttgatgtttgtttattaactaagttgcatgagtcggtctaagatgaaagatgatgt 267665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 14171 - 14232
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||| |||  || |||||| ||| |||||||||||||||||||||||| ||||    
T  14171 tgctgcctatgttgttgtc-gtctattaattaaactgcatgagtcggtctaagatgaaagatg 14232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 99 - 297
Target Start/End: Original strand, 1715 - 1914
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttac 198  Q
    ||||||||||||||||||||||||||  |  | ||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||||||||| |    
T  1715 cagtaagcctgaattatatgatttgacgttgttaataatgtgatataaatgtatatgcattacataaattatatatgatgttgagatgttgttgatttgc 1814  T
Q  199 aat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | | |||||| |||||| ||||||| |||||||| || ||||||||  |||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  1815 atttgatattgttatatcatgaactattttatatactacctatgttaatgttagtttaataactaagctgcatgagtcggtctaagatgaaggatgatgt 1914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 293
Target Start/End: Original strand, 22178098 - 22178333
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       |||||| ||| |||||||||||| ||| |  | ||||||||||||| |||||||||| ||    
T  22178098 gggtaagaaactaagttgcttatcttactgttgttgttt-cagtaaacctaaattatatgattggatgttgttaataatgtgatataaatgtatatgcat 22178196  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    |||||||||||||||||||||| | |||||||||||||| || | |||||| | |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  22178197 tacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgtcatatcatgagctgttttatatactgcctatgttgttgtttgtttat 22178296  T
Q  257 taactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  22178297 taactaagttgcatgagtcggtctaagatgaaagatg 22178333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 297
Target Start/End: Original strand, 20026858 - 20027057
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttac 198  Q
    |||||||||||||||||||| ||| || |  |  ||||||  ||||   |||||||  |||||||||||||| | |||||||| ||||||||||| || |    
T  20026858 cagtaagcctgaattatatgttttaatgttgttgataatgctatatagttgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgc 20026957  T
Q  199 aat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | | |||||| |||||| ||||||||||||  || |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || |||||    
T  20026958 atttgatattattatatcatgaactgttttggatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgaaagaagatgt 20027057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 296
Target Start/End: Original strand, 26012002 - 26012150
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgc 245  Q
    |||||||  |||||||||||||| | ||||||| | ||||||||||||| ||| | |||||| |||||| |||   || |||  || |||||||||||||    
T  26012002 tgtatatacattacatgaattatgtttgatgtttgagatgttgttgattcacatttgatattgttatatcatgt--tgctttgcatactgcctatgttgc 26012099  T
Q  246 tgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  26012100 tgtttgtttattaactaagctgcatgagtcggtctaagttgaaagatgatg 26012150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 22144217 - 22144054
Alignment:
Q  135 aatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatat 231  Q
    |||||||||| | |||||||| ||||| |||||||||||||| |||| | |||||||||||||| |||| |||||| |||||| |||   ||||||  ||    
T  22144217 aatgtgatataattgtatatgcattacttgaattatatatgaatgtttgagatgttgttgatttgcaattgatattgttatatcatgt--tgttttgcat 22144120  T
Q  232 gctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
     || ||||||||| ||| ||||  ||||||||||||||||||||||||||||||||| || |||||    
T  22144119 actacctatgttgatgtctgttatttaactaagctgcatgagtcggtctaagatgaaagaagatgt 22144054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 21502208 - 21502258
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21502208 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 21502258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 27988997 - 27989045
Alignment:
Q  249 ttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27988997 ttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 27989045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 29448158 - 29448055
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgc 245  Q
    |||||||| |||||||||||||  ||||||||| | |||||||||||||| || | |||||| |||||| |||| ||||||||||| |||||||||||||    
T  29448158 tgtatatgcattacatgaattacgtatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgagctgttttatatactgcctatgttgc 29448059  T
Q  246 tgtt 249  Q
    ||||    
T  29448058 tgtt 29448055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 15796519 - 15796435
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||  ||||| |||| ||||||||| ||||||||||||||||||||  ||||| | ||||||||||||||||||||||||||    
T  15796519 tgatattgctatatcatgagctgttttatgtgctgcctatgttgctgttt-attattgattaagctgcatgagtcggtctaagatg 15796435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 26740702 - 26740757
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  26740702 ctatgttgctgtt-gtttattaactaagctgcatgagtcggtctaagatgaaagatg 26740757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 22959584 - 22959646
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  22959584 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 22959646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 19660887 - 19660937
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  19660887 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 19660937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 21329549 - 21329599
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  21329549 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 21329599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 36314643 - 36314593
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  36314643 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatg 36314593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 23469879 - 23469819
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| ||||||||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  23469879 tttatgtgctgcctatgttgctgtt-gtatattaattaagctgcatgagtcggtctaagatg 23469819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 41861475 - 41861555
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaa 282  Q
    ||||||| |||||| |||| ||||||||| |||||||||||||||||||||  |||||| ||||||||||| || |||||||    
T  41861475 tgatattgttatatcatgagctgttttatgtgctgcctatgttgctgtttg-atattaattaagctgcatgtgttggtctaa 41861555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 26732885 - 26732932
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 281  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26732885 ctgcctatgttgctgtt-gtttattaactaagctgcatgagtcggtcta 26732932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 21565611 - 21565549
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||||| || |||||||||    
T  21565611 ctgcctatgttgctatttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 21565549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 21328266 - 21328327
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||||||||||||| | || |||||| |||||||||||||||||||||||||||| ||||    
T  21328266 tgctgcctatgttgctgct-gtctattaattaagctgcatgagtcggtctaagatgaaagatg 21328327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 37723972 - 37723919
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  37723972 ctgcctatgttgctgtctgttatttaactaagctgcatgagtcagtctaagatg 37723919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 8286887 - 8286945
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  8286887 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 8286945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 21729108 - 21729166
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  21729108 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 21729166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 21808433 - 21808491
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  21808433 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 21808491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 21997578 - 21997636
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  21997578 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 21997636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 21293022 - 21293074
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||||||||||| |||  ||||||||||||||||| |||||||||||||    
T  21293022 ctgcctatgttgctgtt-gttatttaactaagctgcatgaatcggtctaagatg 21293074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 21731514 - 21731576
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||| |||||| | ||||||||    
T  21731514 ctgcctatgttgctgtt-gtatattaattaagctgcatgagtcggtc-aagatgtaagatgatgt 21731576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 21809634 - 21809696
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||| |||||| | ||||||||    
T  21809634 ctgcctatgttgctgtt-gtatattaattaagctgcatgagtcggtc-aagatgtaagatgatgt 21809696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 23390540 - 23390598
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||| ||||||||||||| |||  ||||||||||||||||||||||||||||    
T  23390540 ttttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 23390598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 24529297 - 24529239
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  24529297 ttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 24529239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 25421609 - 25421551
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  25421609 ttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 25421551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 13025391 - 13025330
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| |||||||||||||| || |||  ||||||| ||||||||||||||||||||    
T  13025391 ctgttttgtatactgcctatgttgctatt-gttatttaactatgctgcatgagtcggtctaag 13025330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 13095575 - 13095514
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| |||||||||||||| || |||  ||||||| ||||||||||||||||||||    
T  13095575 ctgttttgtatactgcctatgttgctatt-gttatttaactatgctgcatgagtcggtctaag 13095514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 24493649 - 24493588
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| |||||||||||||| || |||  ||||| ||||||||||||||||||||||    
T  24493649 ctgttttgtatactgcctatgttgctatt-gttacttaaccaagctgcatgagtcggtctaag 24493588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 25431471 - 25431414
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaa 282  Q
    |||| ||| ||||||||||||||||| |||  ||||||||| |||||||||||||||||    
T  25431471 ttttgtatactgcctatgttgctgtt-gttatttaactaagatgcatgagtcggtctaa 25431414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 20902128 - 20902161
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatgaat 289  Q
    |||||||||||||||||||||||||||| |||||    
T  20902128 ttaactaagctgcatgagtcggtctaagttgaat 20902161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 60 - 297
Target Start/End: Original strand, 7956 - 8190
Alignment:
Q  60 ggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtatt 159  Q
    ||||||||||||||||||||||||  ||||||       |||||||||||||||||||||||| || |  |  ||||||| ||||   |||||||  |||    
T  7956 ggtaagaaactaagttgtttatcttgctgttgttt----cagtaagcctgaattatatgatttaatgttgttgataatgttatatagttgtatatacatt 8051  T
Q  160 acatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatta 258  Q
    |||||||||||||||||||||| ||||||||||||||  | | |||||| |||||| |||||||| ||| ||| |||||||||||||||||||||| |||    
T  8052 acatgaattatatatgatgttgtgatgttgttgatttgtatttgatattgttatatcatgaactggtttgtatactgcctatgttgctgtttgtttgtta 8151  T
Q  259 actaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  8152 actaagctgcatgagtcggtctaagttgaaagatgatgt 8190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 53 - 293
Target Start/End: Complemental strand, 97255 - 97014
Alignment:
Q  53 atcatagggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtat 152  Q
    ||||| |||||||||||||||||| || ||| |||||||       ||||||||||||  || |||||||||| |  | |||||||||||||   |||||    
T  97255 atcatggggtaagaaactaagttgcttttcttactgttgttgttt-cagtaagcctgatatagatgatttgatgttgttaataatgtgatatatttgtat 97157  T
Q  153 atgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgttt 250  Q
    ||| |||||||||||||||||||||||| | |||||||||||||| || | |||||| |||||| |||||||||||||| | ||||||||||||||||||    
T  97156 atgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgctgttt 97057  T
Q  251 gtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
     ||||||||||||||||||||||| ||||||||||||| ||||    
T  97056 atttattaactaagctgcatgagtgggtctaagatgaaagatg 97014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 53 - 293
Target Start/End: Complemental strand, 106533 - 106292
Alignment:
Q  53 atcatagggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtat 152  Q
    ||||| |||||||||||||||||| || ||| |||||||       ||||||||||||  || |||||||||| |  | |||||||||||||   |||||    
T  106533 atcatggggtaagaaactaagttgcttttcttactgttgttgttt-cagtaagcctgatatagatgatttgatgttgttaataatgtgatatatttgtat 106435  T
Q  153 atgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgttt 250  Q
    ||| |||||||||||||||||||||||| | |||||||||||||| || | |||||| |||||| |||||||||||||| | ||||||||||||||||||    
T  106434 atgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgctgttt 106335  T
Q  251 gtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
     ||||||||||||||||||||||| ||||||||||||| ||||    
T  106334 atttattaactaagctgcatgagtgggtctaagatgaaagatg 106292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 59 - 293
Target Start/End: Original strand, 20220068 - 20220300
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       |||||||||||| ||| |||||||||| |  | ||||||||||||| | |||||||| ||    
T  20220068 gggtaagaaactaagttgcttatcttactgttgttgttc-cagtaagcctgatttagatgatttgatgttgttaataatgtgatataattgtatatgcat 20220166  T
Q  159 tacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatt 257  Q
    |||||||||||||||||||||| |   | ||||||||| || | |||||| |||||| |||||||||||||| | |||||||||||| ||||||||||||    
T  20220167 tacatgaattatatatgatgtttga--gatgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgttgtttgtttatt 20220264  T
Q  258 aactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||| |||||||||||||||||||| ||||    
T  20220265 aactaagctgtatgagtcggtctaagatgaaagatg 20220300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 132 - 293
Target Start/End: Original strand, 1867945 - 1868107
Alignment:
Q  132 aataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttata 230  Q
    |||||||||||||   |||||||| |||||||||||||||||||||||| | ||||||||| |||| || ||||||| |||||| |||| ||||||||||    
T  1867945 aataatgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttcatttgcattgatattgttatatcatgagctgttttata 1868044  T
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    | |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  1868045 tactgcctatgttgttgttagtttattaactaagctgcatgagtcggtctaagttgaaagatg 1868107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 132 - 297
Target Start/End: Original strand, 15008449 - 15008615
Alignment:
Q  132 aataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttata 230  Q
    |||||||||||||   |||||||| ||||| |||||||||||||||||| | | |||||||||||| || ||||||| |||||| |||||||||||||||    
T  15008449 aataatgtgatatatttgtatatgcattacttgaattatatatgatgtttgaggtgttgttgatttgcattgatattgttatatcatgaactgttttata 15008548  T
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    | || ||||||||| |||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  15008549 tactacctatgttgttgtttgtttattaactaagctgcatgagtcggtccaagatgaagaatgatgt 15008615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 148 - 293
Target Start/End: Complemental strand, 14044902 - 14044755
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgg-gatgttg-ttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgc 245  Q
    |||||||  |||||||||||||||||||||||| | ||||||| |||||||  | ||||||| |||||| | || ||||||||| | |||||||||||||    
T  14044902 tgtatatacattacatgaattatatatgatgtttgagatgttgattgatttgtattgatattgttatatcaggagctgttttatgtactgcctatgttgc 14044803  T
Q  246 tgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    | |||||||||||||||||||||||||||||||||||| |||| ||||    
T  14044802 tttttgtttattaactaagctgcatgagtcggtctaagttgaaagatg 14044755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 148 - 293
Target Start/End: Complemental strand, 14354932 - 14354785
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgg-gatgttg-ttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgc 245  Q
    |||||||  |||||||||||||||||||||||| | ||||||| |||||||  | ||||||| |||||| | || ||||||||| | |||||||||||||    
T  14354932 tgtatatacattacatgaattatatatgatgtttgagatgttgattgatttgtattgatattgttatatcaggagctgttttatgtactgcctatgttgc 14354833  T
Q  246 tgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    | |||||||||||||||||||||||||||||||||||| |||| ||||    
T  14354832 tttttgtttattaactaagctgcatgagtcggtctaagttgaaagatg 14354785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 99 - 288
Target Start/End: Complemental strand, 12901527 - 12901337
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttac 198  Q
    |||||||| ||||||||||||||| || |  |   |||||| ||||   |||||||  |||||||||||||| |||||||||| ||||||| || ||| |    
T  12901527 cagtaagcttgaattatatgatttaatgttgttgttaatgttatatagttgtatatacattacatgaattatgtatgatgttgtgatgttgctgttttgc 12901428  T
Q  199 aat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    | | |||||| |||||| ||||| | |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  12901427 atttgatattgttatatcatgaattattttgtatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtttaagttgaa 12901337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 2280070 - 2280234
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatgatg--ttgggatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | | |||||||||||  ||||||||||||||    ||| |||||||||||||| || | |||||| |||||| |||  |||||||      
T  2280070 ataatgtgatataattttatatgtattatttgaattatatatgaatatttgagatgttgttgatttgcatttgatattattatatcatg--ctgttttgc 2280167  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    || |||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  2280168 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtctaagttgaaagatgatg 2280234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 274
Target Start/End: Complemental strand, 14036391 - 14036282
Alignment:
Q  167 ttatatatgatgttgg-gatgttg-ttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaag 264  Q
    |||||||||||||| | ||||||| |||||||  | ||||||| |||||| |||| ||||||||| | ||||||||||||||||||||||||||||||||    
T  14036391 ttatatatgatgtttgagatgttgattgatttgtattgatattgttatatcatgagctgttttatgtactgcctatgttgctgtttgtttattaactaag 14036292  T
Q  265 ctgcatgagt 274  Q
    ||||||||||    
T  14036291 ctgcatgagt 14036282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 274
Target Start/End: Complemental strand, 14346421 - 14346312
Alignment:
Q  167 ttatatatgatgttgg-gatgttg-ttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaag 264  Q
    |||||||||||||| | ||||||| |||||||  | ||||||| |||||| |||| ||||||||| | ||||||||||||||||||||||||||||||||    
T  14346421 ttatatatgatgtttgagatgttgattgatttgtattgatattgttatatcatgagctgttttatgtactgcctatgttgctgtttgtttattaactaag 14346322  T
Q  265 ctgcatgagt 274  Q
    ||||||||||    
T  14346321 ctgcatgagt 14346312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 48991260 - 48991189
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||    
T  48991260 tgttttatatactgcctatgttgttgtttgtttattaactaagctgcatgagtcgatccaagatgaaagatg 48991189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 283
Target Start/End: Complemental strand, 67911 - 67764
Alignment:
Q  134 taatgtgatattaatgtatatgtattacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatg 232  Q
    |||||| |||| | |||||||  |||| ||||||||| | |||| ||| |||||||||||||| || | |||||| |||||| ||||  || |||  ||     
T  67911 taatgttatataattgtatatacattatatgaattatgt-tgatattgagatgttgttgatttgcattcgatattgttatatcatga--tgatttgcata 67815  T
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  67814 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 67764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 133 - 280
Target Start/End: Original strand, 12255742 - 12255892
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatg-atg-ttgggatgttgttgatttaca-atgatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||||||||| ||||||||||||| ||| ||| |||||||| || || ||  ||||||| |||||| ||||| || |||      
T  12255742 ataatgtgatataattgtatatgtattacttgaattatatatgaatgtttgagatgttgtagaatttcatttgatattgttatatcatgaattgatttgc 12255841  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 280  Q
    || ||| |||||||| ||||||||  |||||||||||||||||||| ||||    
T  12255842 atactgactatgttgttgtttgttatttaactaagctgcatgagtctgtct 12255892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 28505350 - 28505404
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatga 287  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  28505350 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatga 28505404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 34200901 - 34200805
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| | |||||| |||||| ||||  || |||  || |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  34200901 gttgttgatttacattcgatattattatatcatga--tggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 34200805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 16495517 - 16495418
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaaga 284  Q
    |||||||||||||| | |||||| |||||| ||||  || |||  || |||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  16495517 gttgttgatttacattcgatattattatatcatga--tggtttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaaga 16495420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 18203912 - 18203821
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||| ||||||  |||  |||||||| | ||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  18203912 tgatattgttatatcttgagatgttttatgtactgtctatgttgttgtt-gtttattaactaagctgcatgagtcgatctaagatgaaagatg 18203821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 811183 - 811245
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||||| || |||||||||    
T  811183 ctgcctatgttgctatttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 811245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 18005715 - 18005653
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  18005715 ctgcttatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 18005653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 44014247 - 44014185
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  44014247 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 44014185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 11996079 - 11996129
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||||||    
T  11996079 ctgcctatgttgttgtttgttaattaactaagatgcatgagtcggtctaag 11996129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 12698910 - 12698850
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  12698910 tgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 12698850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 13647393 - 13647341
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  13647393 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagatg 13647341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 27847882 - 27847935
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||||| ||  ||||||||||||||||| |||||||||||||    
T  27847882 ctgcctatgttgctgtttattatttaactaagctgcatgaatcggtctaagatg 27847935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 40443460 - 40443407
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||| ||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  40443460 ctgcgtatgttgctgtttgttatttaactaagctgcacgagtcggtctaagatg 40443407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 3564408 - 3564466
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  3564408 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 3564466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 16219769 - 16219824
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||||||||||| ||||||||  ||||||||||| |||||||||||||||| ||||    
T  16219769 ctgcctatgttgttgtttgttatttaactaagctacatgagtcggtctaagttgaa 16219824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 16386291 - 16386350
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||| | ||||||||  ||||||||||||||||||||||||||||    
T  16386291 ttttgtatactgcctatgtcgttgtttgttatttaactaagctgcatgagtcggtctaag 16386350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 38227561 - 38227500
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| |||||||||||||| || |||  ||||||||||||||||||||||||||||    
T  38227561 ctgttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtctaag 38227500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 47831872 - 47831826
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||||    
T  47831872 ctatgttgttgtttgttatttaactaagctgcatgagtcggtctaag 47831826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 9033391 - 9033458
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||| || ||||||||||| |||| || |||||| ||||||||||| |||||||||||||||| ||||    
T  9033391 tttatgtgttgcctatgttgttgtt-gtatattaattaagctgcatgtgtcggtctaagatgaaagatg 9033458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 10063872 - 10063920
Alignment:
Q  235 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||| ||||| |||||||||| |||||||||| |||||||    
T  10063872 gcctatgttgctgattgttaattaactaagttgcatgagtcagtctaag 10063920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 16056393 - 16056333
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||| |||| || |||||    
T  16056393 ctatgttgctgtttgttatttaactaaggtgcatcagtcggtctaagttgaaagaagatgt 16056333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 20619456 - 20619389
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||| || ||||||||||| |||| || |||||| ||| |||||||||||||||||||||||| ||||    
T  20619456 tttatgtgttgcctatgttgttgtt-gtatattaattaaactgcatgagtcggtctaagatgaaagatg 20619389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 15144096 - 15144154
Alignment:
Q  239 atgttgctgtttgtttattaactaagctgcatgagtcggtctaagatga-atgatgatgt 297  Q
    ||||||||||| |||  |||||||||||||||||||||||||||| ||| ||||||||||    
T  15144096 atgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgagatgatgatgt 15144154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 9509257 - 9509208
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||| ||||| |||  ||||||||||||||||||||||||||||    
T  9509257 ctgcctatgttactgtt-gttatttaactaagctgcatgagtcggtctaag 9509208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 283
Target Start/End: Original strand, 17062019 - 17062061
Alignment:
Q  241 gttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| |||||  ||||||||||||||||||||||||||||    
T  17062019 gttgctgattgttatttaactaagctgcatgagtcggtctaag 17062061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 18456454 - 18456514
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||| ||| |||||||||||||| |  |||  ||||||||||||||||||||||||||||    
T  18456454 tgttttgtatactgcctatgttgctatc-gttatttaactaagctgcatgagtcggtctaag 18456514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 22072981 - 22072932
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||| ||||||||  |||||||||||||||| ||| |||||||    
T  22072981 tgcctatgttgttgtttgttatttaactaagctgcatgggtcagtctaag 22072932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 38519448 - 38519388
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| |||||||||||||| |||| || |||||| ||||||||||| |||||||| |||||    
T  38519448 tttatgtgctgcctatgttgttgtt-gtatattaattaagctgcatgtgtcggtctgagatg 38519388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 42462025 - 42461965
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| || |||||||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  42462025 tttatgtgttgcctatgttgctgtt-gtatattaattaagatgcatgtgtcggtctaagatg 42461965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 279
Target Start/End: Complemental strand, 38560 - 38339
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       ||||||||||||||||||||||||||| |    | |||||||||||  ||||||||| ||    
T  38560 gggtaagaaactaagttgcttatcttactgttgttgttt-cagtaagcctgaattatatgatttgatgttgagattaatgtgatatatatgtatatgcat 38462  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    |||||||||||||||||||||| | ||||||||||| || || | |||||| | |||| |||| ||||||||||| ||||||||||||||||||||| ||    
T  38461 tacatgaattatatatgatgtttgagatgttgttgaattgcatttgatattgtcatatcatgagctgttttatatactgcctatgttgctgtttgttcat 38362  T
Q  257 taactaagctgcatgagtcggtc 279  Q
    |||||||||||||||||||||||    
T  38361 taactaagctgcatgagtcggtc 38339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 132 - 288
Target Start/End: Complemental strand, 25277 - 25120
Alignment:
Q  132 aataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttata 230  Q
    |||||||||||||   |||||||  |||||||||||||||||||||||| | |||||||||||||| || ||||||  |||||| |||| ||||||||||    
T  25277 aataatgtgatatatttgtatatacattacatgaattatatatgatgtttgagatgttgttgatttgcattgatatcgttatatcatgagctgttttata 25178  T
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25177 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagttgaa 25120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 725 - 609
Alignment:
Q  114 atatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatg-ttgggatgttgttgatttacaatgatatttttat 212  Q
    |||||||||||| |  | ||||||||||||| |||||||||| |||||||||||||||||||||| ||| |||||| ||||||| |  ||||||| ||||    
T  725 atatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttattgatttgctttgatattgttat 626  T
Q  213 attatgaactgttttat 229  Q
    || ||||||||||||||    
T  625 atcatgaactgttttat 609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 84; Significance: 7e-40; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 148 - 297
Target Start/End: Original strand, 60681 - 60832
Alignment:
Q  148 tgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttatatgctgcctatgttgc 245  Q
    |||||||| ||||| |||||||||||||| |||| | |||||||||||||| || |||||||  ||||| |||| ||||||| ||| |||||||||||||    
T  60681 tgtatatgcattacttgaattatatatgaatgtttgagatgttgttgatttgcattgatattggtatatcatgagctgttttgtatactgcctatgttgc 60780  T
Q  246 tgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  60781 tgtttgtttattaactaagctgcatgagtcggtttaagatgaaagatgatgt 60832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 129974 - 129924
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||| ||||  ||||||||| ||||||||||||||||||    
T  129974 ctgcctatgttgctgtgtgttatttaactaagatgcatgagtcggtctaag 129924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 723 - 663
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| || |||||||||||||||| || |||||| ||||||||||| ||||||||||||||    
T  723 tttatgtgttgcctatgttgctgtt-gtatattaattaagctgcatgtgtcggtctaagatg 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 136335 - 136477
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgct 246  Q
    |||||||  |||||||||||||| || |||| || |||||||||||||| || | |||||| |||||| |||||||||||| | | |||||||||| |||    
T  136335 tgtatatacattacatgaattatgtacgatgatgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgtgtactgcctatgtcgct 136434  T
Q  247 gtttgtttattaactaagctgcatgagtcggtctaagatgaat 289  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  136435 gtttgtttattaactaagttgcatgagtcggtctaagatgaat 136477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 145043 - 145185
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgct 246  Q
    |||||||  |||||||||||||| || |||| || |||||||||||||| || | |||||| |||||| |||||||||||| | | |||||||||| |||    
T  145043 tgtatatacattacatgaattatgtacgatgatgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgtgtactgcctatgtcgct 145142  T
Q  247 gtttgtttattaactaagctgcatgagtcggtctaagatgaat 289  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  145143 gtttgtttattaactaagttgcatgagtcggtctaagatgaat 145185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 174835 - 174782
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  174835 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatg 174782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 121834 - 121785
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  121834 ctgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 121785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 297
Target Start/End: Complemental strand, 19668526 - 19668376
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgggatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgct 246  Q
    |||||||  |||||||||||||  |||||||||| |||||||||||||| || | |||||| |||||| ||||||||||||  || ||  ||||||||||    
T  19668526 tgtatatacattacatgaattacgtatgatgttgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgcatactatctatgttgct 19668427  T
Q  247 gtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  19668426 gtttgttaattaactaagctgcatgagtcggtctaagttgaaagatgatgt 19668376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 284
Target Start/End: Complemental strand, 23076974 - 23076748
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||| ||| |||||| |||||||       ||||||||||||  || |||||||||| |  | |||||||||||||   |||||||| ||    
T  23076974 gggtaagaaactaatttgcttatcttactgttgttgttt-cagtaagcctgatatagatgatttgatgttgttaataatgtgatatatttgtatatgcat 23076876  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    ||||||||||||||||||||||   | |||||||||||  || | |||||| ||||||   ||  |||||||| | |||||||||||| |||||||||||    
T  23076875 tacatgaattatatatgatgtttaagttgttgttgattatcacttgatattattatatctggatatgttttatgtactgcctatgttgttgtttgtttat 23076776  T
Q  257 taactaagctgcatgagtcggtctaaga 284  Q
    ||||||||||||||||||||||||||||    
T  23076775 taactaagctgcatgagtcggtctaaga 23076748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 132 - 249
Target Start/End: Complemental strand, 18696657 - 18696539
Alignment:
Q  132 aataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttata 230  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| ||||||| |  ||||||| |||||| ||||||||||||||     
T  18696657 aataatgtgatataaatgtatatgcattacatgaattatatatgatgttggagatgttattgatttgctttgatattgttatatcatgaactgttttatg 18696558  T
Q  231 tgctgcctatgttgctgtt 249  Q
    |  ||||||||||||||||    
T  18696557 tattgcctatgttgctgtt 18696539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 284
Target Start/End: Complemental strand, 35008392 - 35008166
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| ||||||        ||||||||||||  || |||||||||| |  | |||||||||||||   |||||||  ||    
T  35008392 gggtaagaaactaagttgcttatcttactgtt-attgtttcagtaagcctgatatagatgatttgatgttgttaataatgtgatatatttgtatattcat 35008294  T
Q  159 tacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttat 256  Q
    ||||||||||||||||||||||   | |||| ||||||  || | |||||| ||||||   ||  |||||||| | |||||||||||| |||||||||||    
T  35008293 tacatgaattatatatgatgtttaagttgtttttgattatcacttgatattattatatctggatatgttttatgtactgcctatgttgttgtttgtttat 35008194  T
Q  257 taactaagctgcatgagtcggtctaaga 284  Q
    ||||||||||||||||||||||||||||    
T  35008193 taactaagctgcatgagtcggtctaaga 35008166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 114 - 250
Target Start/End: Complemental strand, 18706493 - 18706356
Alignment:
Q  114 atatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatg-ttgggatgttgttgatttacaatgatatttttat 212  Q
    |||||||||||| |  | |||||||| |||| |||||||||| |||||||||||||||||||||| ||  |||||| ||||||| |  ||||||| ||||    
T  18706493 atatgatttgatgttgttaataatgtcatataaatgtatatgcattacatgaattatatatgatgtttaagatgttattgatttgctttgatattgttat 18706394  T
Q  213 attatgaactgttttatatgctgcctatgttgctgttt 250  Q
    || ||||||||||||||||  |||||||||||||||||    
T  18706393 atcatgaactgttttatatattgcctatgttgctgttt 18706356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 296
Target Start/End: Complemental strand, 23019574 - 23019412
Alignment:
Q  134 taatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatat 231  Q
    |||||| |||| | |||||||  |||||||||||||| | ||||||| | ||||||||||| || || | |||||| |||||| |||   ||||||  ||    
T  23019574 taatgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgacttgcatttgatattgttatatcatgt--tgttttgcat 23019477  T
Q  232 gctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
     |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  23019476 actgcttatgttgctgtttgtttattaactaagctgcataagtcggtctaagatgaaagatgatg 23019412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 296
Target Start/End: Complemental strand, 20109237 - 20109144
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    ||||||| ||||||||||   ||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  20109237 tgatattgttatattatgt--tgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagttgaaagatgatg 20109144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 9098489 - 9098630
Alignment:
Q  157 attacatgaattatatatgatgttgggatgttgttgatttaca-atgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgttta 255  Q
    |||||||||||||| | |||||||| || ||||||||  | ||  ||||||| |||||| ||||| ||||||  || |||||| ||||||||||||||      
T  9098489 attacatgaattatgtttgatgttgtgaagttgttgaaatgcatttgatattgttatatcatgaattgttttgcatactgcctttgttgctgtttgttat 9098588  T
Q  256 ttaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||||||||||||||| |||| || |||||    
T  9098589 ttaactaagctgcatgagtcggtctaagttgaaagaagatgt 9098630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 286
Target Start/End: Original strand, 18199333 - 18199522
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttg--ggatgttgttgattt 196  Q
    ||||||| ||||  || |||||||||| |  | ||||||||||||| |||||||||| ||||  ||||||||||||||||||   |  || ||||||||     
T  18199333 cagtaagtctgatataaatgatttgatgttgttaataatgtgatataaatgtatatgcattaagtgaattatatatgatgtttaagattgatgttgatta 18199432  T
Q  197 acaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
     || | |||||| |||||| ||||  |||||||| |||| |||||||||||||||  ||||| | ||||||||||||||||||||||||||    
T  18199433 tcatttgatattgttatatcatgagttgttttatgtgcttcctatgttgctgttt-attattgattaagctgcatgagtcggtctaagatg 18199522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 33443147 - 33443063
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||| ||||||  |||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  33443147 tgatattgttatatcttgagatgttttatatactgcctatgttgctgtt-gtttattaactaagctgcatgagtcggtctatgatg 33443063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 286
Target Start/End: Original strand, 18177589 - 18177778
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttg--ggatgttgttgattt 196  Q
    ||||||| ||||  || |||||||||| |  | ||||||||||||| |||||||||| ||||  ||||||||||||||||||   |  || ||||||||     
T  18177589 cagtaagtctgatataaatgatttgatgttgttaataatgtgatataaatgtatatgcattaagtgaattatatatgatgtttaagattgatgttgatta 18177688  T
Q  197 acaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
     || | |||||| |||||| ||||  |||||||| |||| ||||||||| ||||| || ||| | ||||||||||||||||||||||||||    
T  18177689 tcatttgatattgttatatcatgagttgttttatgtgcttcctatgttgttgtttatt-attgattaagctgcatgagtcggtctaagatg 18177778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 286
Target Start/End: Complemental strand, 18204282 - 18204093
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttg--ggatgttgttgattt 196  Q
    ||||||| ||||  || |||||||||| |  | ||||||||||||| |||||||||| ||||  ||||||||||||||||||   |  || ||||||||     
T  18204282 cagtaagtctgatgtaaatgatttgatgttgttaataatgtgatataaatgtatatgcattaagtgaattatatatgatgtttaagattgatgttgatta 18204183  T
Q  197 acaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
     || | |||||| |||||| ||||  |||||||| |||| ||||||||| ||||| || ||| | ||||||||||||||||||||||||||    
T  18204182 tcatttgatattgttatatcatgagttgttttatgtgcttcctatgttgttgtttatt-attgattaagctgcatgagtcggtctaagatg 18204093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 35245655 - 35245602
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  35245655 ctgcctatgttggtgtttgttaattaactaagctgcatgagtcggtctaagatg 35245602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 27333270 - 27333320
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  27333270 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 27333320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 27394010 - 27394060
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  27394010 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 27394060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 28103816 - 28103890
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatata 173  Q
    ||||||||||||||||||||||||||| |  | ||||||||||||| |||||||||| ||||  |||||||||||    
T  28103816 cagtaagcctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcattatgtgaattatata 28103890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 25644389 - 25644325
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||| |||| || |||||    
T  25644389 ctgcctatgttgctgtctgttatttaactaagctgcatgagtcggtctaagttgaaagaagatgt 25644325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 19652264 - 19652202
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  19652264 ctgcctatgttgttgtttgttgtttaactaagctgcatgagtcggtctaagttg-atgatgatg 19652202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 281
Target Start/End: Complemental strand, 22831571 - 22831524
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 281  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||    
T  22831571 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 22831524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 16920682 - 16920735
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||| ||||||    
T  16920682 ctgcctatgctgctgtttgttatttaactaagctgcatgagtcggtcaaagatg 16920735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 18453258 - 18453198
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| ||||||||||||||||||| || |||||| |||||||||| |||||||||||||||    
T  18453258 tttatgtgctgcctatgttgctgtt-gtatattaattaagctgcataagtcggtctaagatg 18453198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 18456762 - 18456721
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  18456762 ttaactaagctgcatgagtcggtctaagatgaaggatgatgt 18456721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 18461922 - 18461881
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  18461922 ttaactaagctgcatgagtcggtctaagatgaaggatgatgt 18461881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 18821919 - 18821960
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  18821919 ttaactaagctgcatgagtcggtctaagatgaaggatgatgt 18821960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 293
Target Start/End: Original strand, 18896268 - 18896425
Alignment:
Q  134 taatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaatgatatttttatattatgaactgttttatatg 232  Q
    ||||| ||||| | |||||||| ||||  ||||||||||| ||||||   | |||||||||||  || ||||||| ||||||  |||| || | | | ||    
T  18896268 taatgggatataattgtatatgcattatgtgaattatataagatgtttaagttgttgttgattgtcattgatattgttatatcttgaagtgatattt-tg 18896366  T
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||||||||||| | || |||||| ||||||| |||||||||||||||||||||||||    
T  18896367 ctgcctatgttgctgat-gtatattaa-taagctgtatgagtcggtctaagatgaatgatg 18896425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 11185568 - 11185521
Alignment:
Q  239 atgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||||    
T  11185568 atgttgttgtttgttatttaactaagctgcatgagtcggtctaagatg 11185521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 16496321 - 16496263
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  16496321 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 16496263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 20361004 - 20361062
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||    
T  20361004 ttttgtatgctgcctatgttgctgtt-gttatttaactaagctgcatgagtcgatctaag 20361062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 28496477 - 28496573
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| | |||||| |||||| ||||  || |||  || ||||||||||||||  |||||  ||||||||||||||||||||||||||||    
T  28496477 gttgttgatttacattcgatattattatatcatga--tggtttgcatactgcctatgttgctaattgttatttaactaagctgcatgagtcggtctaag 28496573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 29060617 - 29060559
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  29060617 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 29060559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 29808888 - 29808984
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| | |||||| |||||| ||||  || |||  || ||||||||||||||  |||||  ||||||||||||||||||||||||||||    
T  29808888 gttgttgatttacattcgatattattatatcatga--tggtttgcatactgcctatgttgctaattgttatttaactaagctgcatgagtcggtctaag 29808984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 19362496 - 19362436
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||| || | || |||||| |||||||||||||||||||||||||||||||||    
T  19362496 tgctgcctatgttgttgat-gtatattaa-taagctgcatgagtcggtctaagatgaatgatg 19362436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 20076768 - 20076719
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  20076768 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 20076719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 16493214 - 16493152
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||| |||||| | ||||||||    
T  16493214 ctgcctatgttgctgtt-gtatattaattaagctgcatgagtcggtc-aagatgtaagatgatgt 16493152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 17287852 - 17287898
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||    
T  17287852 cctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 17287898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 287
Target Start/End: Original strand, 19303615 - 19303646
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatga 287  Q
    ||||||||||||||||||||||||||||||||    
T  19303615 ttaactaagctgcatgagtcggtctaagatga 19303646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 287
Target Start/End: Original strand, 22080800 - 22080831
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatga 287  Q
    ||||||||||||||||||||||||||||||||    
T  22080800 ttaactaagctgcatgagtcggtctaagatga 22080831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 4185873 - 4185919
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtc 279  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||||||    
T  4185873 ctgcctatgttgctgtctgttgtttaactatgctgcatgagtcggtc 4185919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 25656690 - 25656645
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||    
T  25656690 ctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 25656645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 59 - 252
Target Start/End: Complemental strand, 248 - 54
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    ||||||||||||||||||  ||||| |||||||       |||||||||| ||||| |||||||||| |  | |||||||| |||| |||||||||| ||    
T  248 gggtaagaaactaagttgcatatcttactgttgttgttt-cagtaagcctaaattaaatgatttgatgttgttaataatgttatataaatgtatatgcat 150  T
Q  159 tacatgaattatatatgatg-ttgggatgttgttgatttaca-atgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgt 252  Q
    |||||||||||||||||||| ||| |||||| ||||||| ||  ||||||| |||||| |||||||||||||| | ||||||||||||||||||||    
T  149 tacatgaattatatatgatgtttgagatgttattgatttgcatctgatattgttatatcatgaactgttttatgtactgcctatgttgctgtttgt 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 71; Significance: 4e-32; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 133 - 297
Target Start/End: Complemental strand, 13299 - 13133
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tg--ttgggatgttgttgatttacaat-gatatttttatattatgaactgtttta 228  Q
    |||||||||||| | |||||||| ||||| |||||||||||||| ||  ||  |||||||||||||| || | |||||| |||||| |||  |||||||     
T  13299 ataatgtgatataattgtatatgcattacttgaattatatatgaatggtttcagatgttgttgatttgcatttgatattgttatatcatg--ctgttttg 13202  T
Q  229 tatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
     || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13201 catactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtctaagatgaaggatgatgt 13133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 16051 - 16216
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| ||||| ||||||||||| || |||| | ||||||||||||||||| | |||||| |||||| |||   ||||||      
T  16051 ataatgtgatataattgtatatgcattacttgaattatataagaatgtttgagatgttgttgatttacatttgatattgttatatcatgt--tgttttgc 16148  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    || || ||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  16149 atactacctatgttgttgtttgtttattaactaagctgcatgagtcggtctaagttgaaagatgatgt 16216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 2741 - 2670
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||    
T  2741 tgttttatgtactgcctatgttgttgcttgtttattaactaagctgcatgagtcggtctaagatgaaagatg 2670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 18116 - 18298
Alignment:
Q  59 gggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtat 158  Q
    |||||||||||||||||| |||||| |||||||       |||||||||||||||||||| |||||| |  | | ||||||||||| |||||||||| ||    
T  18116 gggtaagaaactaagttgcttatctcactgttgttgttt-cagtaagcctgaattatatgttttgatgttgttattaatgtgatataaatgtatatgcat 18214  T
Q  159 tacatgaattatatatgatg-ttgggatgttgttgatttaca-atgatatttttatattatgaactgttttatatgctgcctat 240  Q
    |||||||||||||||||||| ||| |||||||||||||| ||  ||||||| | |||| |||| ||||||||||| ||||||||    
T  18215 tacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgtcatatcatgagctgttttatatactgcctat 18298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 13008 - 12953
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||||||||||| ||||||||  |||||| ||| ||||||||||||||||| ||||    
T  13008 ctgcctatgttgttgtttgttatttaactgagcagcatgagtcggtctaagttgaa 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 27700 - 27865
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| |||||  ||||||||| ||| |||| | ||||||||||||||||| | |||||| |||||| |||  |||||||      
T  27700 ataatgtgatataattgtatatgcattactagaattatatgtgaatgtttgagatgttgttgatttacatttgatattgttatatcatg--ctgttttgc 27797  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    || || ||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  27798 atactacctatgttgttgtttgtttattaactaagctgcatgagtcggtctaagttgaaagatgatgt 27865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 2776 - 2684
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||| |||||| |||| ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  2776 tgatattgttatatcatgagctgttttatatactgcctatgttgctgtttgtctattgactaagctgcatgagtcggtctaagatgaaagatg 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 296
Target Start/End: Complemental strand, 32738 - 32542
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgattta 197  Q
    ||||||||||||||||||| || | || | ||   |||||| ||||   |||||||  |||||||||||||| | ||||||| | |||||||||||||      
T  32738 cagtaagcctgaattatataatctaatgtttttgttaatgttatatagttgtatatacattacatgaattatgtttgatgtttgagatgttgttgattgc 32639  T
Q  198 caatgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
       ||||||| |||||| |||   ||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  32638 atttgatattgttatatcatgt--tgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagttgaaagatgatg 32542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 51933 - 51999
Alignment:
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||| |||||||| |  |||||||||||||||||||||||||||||| || ||||||||    
T  51933 atgctgcctatgt-gctgtttgatgtttaactaagctgcatgagtcggtctaagataaaggatgatgt 51999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 12667 - 12573
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||| |||||| |||  |||||||  || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  12667 tgatattgttatatcatg--ctgttttgcatactgcctatgttgctgtttgtttattaactaagctacatgagtcggtctaagatgaaagaagatgt 12573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 103651 - 103747
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||| |||||| ||||| |||||| ||| || ||||||||||||||| ||||||||||||||||||| |||||||||||| |||| || |||||    
T  103651 tgatattgttatatcatgaattgttttttatactacctatgttgctgtttatttattaactaagctgcattagtcggtctaagttgaaagaggatgt 103747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 1131 - 1037
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||| |||||| |||  |||||||  || |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || |||||    
T  1131 tgatattgttatatcatg--ctgttttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgaaagaagatgt 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 53500 - 53665
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatgatg--ttgggatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||  ||||| ||||||||||||||    ||| ||||||| ||| || || | |||||| |||||| |||   ||||||      
T  53500 ataatgtgatataattgtatatacattacttgaattatatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgt--tgttttgc 53597  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    || |||||||||||||||||||||||||||||||||||||||| || |||||||||||| || |||||    
T  53598 atactgcctatgttgctgtttgtttattaactaagctgcatgaatcagtctaagatgaaagaagatgt 53665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 1358 - 1305
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1358 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatg 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 7335 - 7282
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  7335 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatg 7282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 19718 - 19757
Alignment:
Q  254 tattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  19718 tattaaataagatgcatgagtcggtctaagatgaatgatg 19757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 15289 - 15338
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 281  Q
    |||||||||||||||| || |||  ||||||||||||||||||||||||||    
T  15289 tgctgcctatgttgctatt-gttatttaactaagctgcatgagtcggtcta 15338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 51651 - 51598
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  51651 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatg 51598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 2858 - 2920
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  2858 ctgcctatgtagctgtttgttatttaactaagctgcatgagtcggtctaagatg-atgatgatg 2920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 6604 - 6542
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  6604 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 6542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 8565 - 8480
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    ||||||| |||||| |||  |||||||  || |||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||    
T  8565 tgatattgttatatcatg--ctgttttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgaa 8480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 15776 - 15680
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| | |||||| |||||| ||||  || ||| ||| |||||||||||||||||||||  |||||||||||||| |||||||||||||    
T  15776 gttgttgatttacattcgatattattatatcatga--tggtttgtatactgcctatgttgctgtttgttatttaactaagctgcacgagtcggtctaag 15680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 19333 - 19271
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  19333 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 19271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 11407 - 11311
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| | |||||| |||||| ||||  || |||  || |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11407 gttgttgatttacattcgatattattatatcatga--tggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 11311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 2112 - 2016
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| | |||||| |||||| ||||  || |||  || |||||||||||  ||||||||  ||||||||||||||||||||||||||||    
T  2112 gttgttgatttacattcgatattattatatcatga--tggtttgcatactgcctatgtttgtgtttgttatttaactaagctgcatgagtcggtctaag 2016  T

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Target: scaffold0046; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 28491 - 28433
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  28491 ttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 28433  T

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Target: scaffold0046; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 4608 - 4571
Alignment:
Q  246 tgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  4608 tgtttgttatttaactaagctgcatgagtcggtctaag 4571  T

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Target: scaffold0023 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 100443 - 100381
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  100443 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 100381  T

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Target: scaffold0023; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 119944 - 119894
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  119944 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 119894  T

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Target: scaffold0023; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 40226 - 40288
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||| ||  |||||||||||||||||||| ||||||| || |||||||||    
T  40226 ctgcctatgttgctgtttattatttaactaagctgcatgagtcagtctaagttg-atgatgatg 40288  T

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Target: scaffold0023; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 101568 - 101506
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||| ||||||||  ||||||||||||||||| |||||||||| || |||||||||    
T  101568 ctgcctatgttgttgtttgttgtttaactaagctgcatgaatcggtctaagttg-atgatgatg 101506  T

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Target: scaffold0008 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 14749 - 14811
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  14749 ctgcctatgttgctgtttgttagttaactaagctgcatgagtcggtctaagttg-atgatgatg 14811  T

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Target: scaffold0556 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 6881 - 6827
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatga 287  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  6881 ctgcctatgttgctgtttgttatttaactgagctgcatgagtcggtctaagatga 6827  T

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Target: scaffold0456 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 10475 - 10525
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  10475 ctgcctatgttgctgtttgttaattaactatgctgcatgagtcggtctaag 10525  T

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Target: scaffold0184 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 286
Target Start/End: Original strand, 1075 - 1174
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaaga 284  Q
    |||||||||||||| | |||||| |||||| ||||  || |||  || |||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  1075 gttgttgatttacattcgatattattatatcatga--tggtttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaaga 1172  T

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Target: scaffold0598 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 1101 - 1154
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  1101 ctgcctatgttgatgtttattaattaactaagctgcatgagtcggtctaagatg 1154  T

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Target: scaffold0351 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 16351 - 16298
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  16351 ctgcctatgttgctgtttcttatttaactaagctgcatgagtcggtctaagatg 16298  T

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Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 160753 - 160685
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatga--atgatgatgtcc 299  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||| |||  ||||||||||||    
T  160753 ctgcctatgttgctgattgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatgtcc 160685  T

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Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 497496 - 497435
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||| |||| || |||||||||||||||||| |||||| ||||||||| ||||    
T  497496 tgctgcctatgttgttgtt-gtatattaactaagctgcatgtgtcggtttaagatgaaagatg 497435  T

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Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 287
Target Start/End: Original strand, 85699 - 85730
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatga 287  Q
    ||||||||||||||||||||||||||||||||    
T  85699 ttaactaagctgcatgagtcggtctaagatga 85730  T

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Target: scaffold0111 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 7507 - 7440
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||| ||||||||||||||||||| || |||||| ||| |||||||||||||||||||||||| ||||    
T  7507 tttatgtgctgcctatgttgctgtt-gtatattaattaaactgcatgagtcggtctaagatgaaagatg 7440  T

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Target: scaffold0111; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 14626 - 14559
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||| ||||||||||||||||||| || |||||| ||| |||||||||||||||||||||||| ||||    
T  14626 tttatgtgctgcctatgttgctgtt-gtatattaattaaactgcatgagtcggtctaagatgaaagatg 14559  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 206545 - 206624
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 281  Q
    ||||||| ||||||  |||  |||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  206545 tgatattgttatatcttgagatgttttatgtactgcctatgttgctgtt-gtttattaactaagctgcatgagtcgatcta 206624  T

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Target: scaffold1984 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 296
Target Start/End: Complemental strand, 283 - 136
Alignment:
Q  148 tgtatatgtattacatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgc 245  Q
    |||||||  |||||||||||||| | |||| || | |||||||||||||| || | |||||| |||||| ||||  || |||  || ||||||||||||     
T  283 tgtatatacattacatgaattatgtttgatatttgagatgttgttgatttgcattcgatattgttatatcatga--tgatttgcatactgcctatgttgt 186  T
Q  246 tgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    ||||||||  ||||||||||||||||| |||||||||| || |||||||||    
T  185 tgtttgttgtttaactaagctgcatgaatcggtctaagttg-atgatgatg 136  T

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Target: scaffold0555 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 10593 - 10648
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  10593 ctgcctatgttgctgtttgttatttaactaagctgcataagtcggtctaagttgaa 10648  T

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Target: scaffold0461 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 275
Target Start/End: Complemental strand, 11634 - 11491
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatgatg--ttgggatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| ||||| |||||||||| ||||   ||| ||||||||| | ||||    |||||| |||||| ||||  ||||||      
T  11634 ataatgtgatataattgtatatgcattacttgaattatatgtgattatttgagatgttgtttacttacgtgcgatattattatatcatga--tgttttgc 11537  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtc 275  Q
    || ||||||||||||||| ||||| |||||||||||||||||||||    
T  11536 atactgcctatgttgctgattgttaattaactaagctgcatgagtc 11491  T

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Target: scaffold0207 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 2697 - 2759
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  2697 ctgcctatgttgatgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 2759  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 275
Target Start/End: Original strand, 38207 - 38350
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatgatg--ttgggatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | |||||||| ||||| |||||||||| ||||   ||| ||||||||| | ||||    |||||| |||||| ||||  ||||||      
T  38207 ataatgtgatataattgtatatgcattacttgaattatatgtgattatttgagatgttgtttacttacgtgcgatattattatatcatga--tgttttgc 38304  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtc 275  Q
    || ||||||||||||||| ||||| |||||||||||||||||||||    
T  38305 atactgcctatgttgctgattgttaattaactaagctgcatgagtc 38350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 23935 - 23990
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||| ||||    
T  23935 ctgcctatgttgctgtttgttatttaactaagctacatgagtcggtctaagttgaa 23990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 1151 - 1101
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  1151 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaag 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 5183 - 5233
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  5183 cctatgttgatgtttgttatttaactaagctgcatgagtcggtctaagatg 5233  T

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Target: scaffold0490 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 2029 - 1968
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||| ||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  2029 ttttgtatactgcctatgtcgctgtt-gttaattaactaagctgcatgagtcggtctaagatg 1968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 6680 - 6630
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  6680 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaag 6630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 14060 - 14010
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  14060 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaag 14010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 5712 - 5662
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||||    
T  5712 ctgcctatgttgctgtttgttattttactaagctgcatgagtcggtctaag 5662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 6175 - 6225
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  6175 ctgcctatgttactgtttgttatttaactaagctgcatgagtcggtctaag 6225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 32997 - 33058
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| |||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  32997 ctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggtctaag 33058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 46008 - 45947
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| |||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  46008 ctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggtctaag 45947  T

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Target: scaffold0120; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 16190 - 16132
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  16190 ttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 16132  T

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Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 57887 - 57827
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||||||||||||| | || |||||| |||||||||||||||||||||||||||||||||    
T  57887 tgctgcctatgttgctgat-gtatattaa-taagctgcatgagtcggtctaagatgaatgatg 57827  T

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Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 24324 - 24405
Alignment:
Q  201 tgatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| | |||   |||||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  24324 tgatatttttatgtcatgctgtgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 24405  T

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Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 62267 - 62217
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  62267 ctgcctatgttgctgtttgttgtttaactaagctgcatgagtcggtttaag 62217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 132722 - 132665
Alignment:
Q  238 tatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||    
T  132722 tatgttgctgtttgttatttatctaagctgcatgagtcggtctaagatg-atgatgatg 132665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 15829 - 15879
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  15829 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaag 15879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 142657 - 142597
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| ||||||||||||||||||| || |||||| ||||||||||| |||||| |||||||    
T  142657 tttatgtgctgcctatgttgctgtt-gtatattaattaagctgcatgtgtcggtttaagatg 142597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 38202 - 38263
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||| ||||    
T  38202 tgctgcctatgttgctgtt-gtatattaattaagctgcatgtgtcggtctaagatgaaagatg 38263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 51980 - 51932
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  51980 tgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 51932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 168022 - 168080
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  168022 ttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 168080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 3192 - 3252
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  3192 tgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 3252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 12009 - 11968
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  12009 ttaactaagctgcatgagtcggtctaagatgaaggatgatgt 11968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 13576 - 13516
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  13576 tgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 13516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 36256 - 36196
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| |||||||||||||| |||| || |||||| ||||||||||||||||||||||||||    
T  36256 tttatgtgctgcctatgttgttgtt-gtatattaattaagctgcatgagtcggtctaagatg 36196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 47064 - 47011
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    |||||||||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  47064 ctgcctatgttgttgtttgttatttaactaagctacatgagtcggtctaagatg 47011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 20497 - 20538
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  20497 ttaactaagctgcatgagtcggtctaagatgaaggatgatgt 20538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 295
Target Start/End: Complemental strand, 10768 - 10534
Alignment:
Q  60 ggtaagaaactaagttgtttatctaactgttgnnnnnnncagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtatt 159  Q
    ||||||||||||||||||||||||  ||||||       ||||||||||||||||||| || | || |  |   |||||| |||| | |||||||  |||    
T  10768 ggtaagaaactaagttgtttatcttgctgttgttgttt-cagtaagcctgaattatataatctaatgttgttgttaatgtcatataattgtatatacatt 10670  T
Q  160 acatgaattatatatgatgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttatt 257  Q
    ||||||||||| |  |||||| | ||||||| ||| || || | |||||| |||||| ||||  || |||  || |||||||||||| ||||||||  ||    
T  10669 acatgaattatgttcgatgtttgagatgttgatgacttgcattcgatattgttatatcatga--tgatttgcatactgcctatgttgttgtttgttattt 10572  T
Q  258 aactaagctgcatgagtcggtctaagatgaatgatgat 295  Q
    ||  |||||||||||||||||||||| |||| ||||||    
T  10571 aaaaaagctgcatgagtcggtctaagttgaaagatgat 10534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 30407 - 30340
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    ||||| || |||||||||||||||| || |||||| ||| |||||||||||||||||||||||| ||||    
T  30407 tttatgtgatgcctatgttgctgtt-gtatattaattaaactgcatgagtcggtctaagatgaaagatg 30340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 3230 - 3288
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  3230 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 3288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 1089 - 1136
Alignment:
Q  236 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  1089 cctatgttgttgtttgttatttaactaagctgcatgagtcggtctaag 1136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 8010 - 8177
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatga-tgttgg-gatgttgttgatttacaat-gatatttttatattatgaactgttttat 229  Q
    |||||||||||| | | |||||  ||||| |||||||||||||| ||||   ||||||||||| || || | |||||| |||||| |||| ||| |||      
T  8010 ataatgtgatataattttatatacattacttgaattatatatgaatgtttaagatgttgttgaatttcatttgatattattatatcatgagctgatttgc 8109  T
Q  230 atgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    || ||||||||| |||| ||||||  |||| ||||||||||| ||||||||| |||||| || |||||    
T  8110 atactgcctatgctgctatttgttatttaattaagctgcatgcgtcggtctatgatgaaagaagatgt 8177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 283
Target Start/End: Complemental strand, 12969 - 12785
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgttgg-gatgttgttgattta 197  Q
    |||||||||||||||||||||| | || |  | | |||||| |||| | |||||||  |||||||||||||| | |||||||   ||||||| ||| ||     
T  12969 cagtaagcctgaattatatgatctaatgttgttattaatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttg 12870  T
Q  198 caat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    || | |||||| |||||| ||||  || |||  ||  ||||||||||| ||||||||  ||| ||||||||||||||||||||||||    
T  12869 cattcgatattgttatatcatga--tgatttgcatattgcctatgttgttgtttgttatttagctaagctgcatgagtcggtctaag 12785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 8964 - 8899
Alignment:
Q  226 ttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||| ||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||| ||||    
T  8964 ttatgtgctgcctatgttgctgtt-gtatattaa-taagctgcatgtgtcggtctaagatgaaggatg 8899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 34238 - 34142
Alignment:
Q  186 gttgttgatttacaat-gatatttttatattatgaactgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| | |||||| |||||| ||||   ||| ||||  |||||||||||| ||||||||  |||||||||||| |||||||||||||||    
T  34238 gttgttgatttacattcgatattattatatcatgatgggttgtata--ctgcctatgttgttgtttgttatttaactaagctgtatgagtcggtctaag 34142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 45844 - 45906
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    |||||||| || |||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  45844 ctgcctatttttctgtttgttatttaactaagctgcatgagtcggtctaagttg-atgatgatg 45906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 26109 - 26167
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  26109 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 26167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 17261 - 17319
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  17261 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 17319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 79403 - 79444
Alignment:
Q  256 ttaactaagctgcatgagtcggtctaagatgaatgatgatgt 297  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  79403 ttaactaagctgcatgagtcggtctaagatgaaggataatgt 79444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 22726 - 22777
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaa 288  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||| ||||    
T  22726 ctatgtcgctgtttgttatttaactaagctgcatgagtcggtctaagttgaa 22777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 805 - 858
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtc 279  Q
    |||||||||||||||||||| |||| || |||||| |||||||||||||||||||    
T  805 tttatatgctgcctatgttgttgtt-gtatattaattaagctgcatgagtcggtc 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 32162 - 32105
Alignment:
Q  238 tatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    ||||||| ||||||||  ||| ||||||||||||||||||||||||||| |||||||||    
T  32162 tatgttgttgtttgttatttatctaagctgcatgagtcggtctaagatg-atgatgatg 32105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 39557 - 39496
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  39557 ctgttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 39496  T

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Target: scaffold0113 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 32135 - 32086
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  32135 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 32086  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 75255 - 75316
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    ||||||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  75255 ctgttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 75316  T

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Target: scaffold0247 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 18084 - 18129
Alignment:
Q  238 tatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||    
T  18084 tatgttgctgattgttaattaactaagctgcatgagtcagtctaag 18129  T

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Target: scaffold0108 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 3333 - 3273
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| || |||||||||||||||| || |||||| ||||||||||| ||||||||||||||    
T  3333 tttatgtgttgcctatgttgctgtt-gtatattaattaagctgcatgtgtcggtctaagatg 3273  T

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Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 20978 - 20929
Alignment:
Q  234 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||| ||||| ||||||||||||  |||||||||||||||    
T  20978 tgcctatgttgctgattgttaattaactaagctttatgagtcggtctaag 20929  T

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Target: scaffold0211 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 28821 - 28884
Alignment:
Q  233 ctgcctatgttgctgtt-tgtttattaactaagctgcatgagtcggtctaagatgaatgatgatg 296  Q
    ||||||||||||||||  ||||  |||||||||||||||||||||||||||| || |||||||||    
T  28821 ctgcctatgttgctgtaatgttgtttaactaagctgcatgagtcggtctaagttg-atgatgatg 28884  T

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Target: scaffold1842 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 1092 - 1150
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  1092 ttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 1150  T

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Target: scaffold0403 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 4926 - 4868
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  4926 ttttgtatactgcctatgttgctgtt-gttatttaactaatctgcatgagtcggtctaag 4868  T

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Target: scaffold0358 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 4789 - 4731
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  4789 ttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaag 4731  T

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Target: scaffold0193 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 13288 - 13230
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||||||||||||||||| |||  |||||||||||||||||||| |||||||    
T  13288 ttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcagtctaag 13230  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 1928 - 1870
Alignment:
Q  224 ttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||| ||| ||| ||||||||||||| |||  ||||||||||||||||||||||||||||    
T  1928 ttttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaag 1870  T

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Target: scaffold0561 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 10641 - 10595
Alignment:
Q  134 taatgtgatattaatgtatatgtattacatgaattatatatgatgtt 180  Q
    ||||||||||| | |||||| | ||||||||||||||||||||||||    
T  10641 taatgtgatataattgtatacgcattacatgaattatatatgatgtt 10595  T

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Target: scaffold0356 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 614 - 660
Alignment:
Q  134 taatgtgatattaatgtatatgtattacatgaattatatatgatgtt 180  Q
    ||||||||||| | |||||| | ||||||||||||||||||||||||    
T  614 taatgtgatataattgtatacgcattacatgaattatatatgatgtt 660  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 38758 - 38804
Alignment:
Q  237 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||||||||||||||  ||||||||| ||||||||| ||||||||    
T  38758 ctatgttgctgtttgttatttaactaaggtgcatgagtaggtctaag 38804  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 22348 - 22287
Alignment:
Q  231 tgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatgaatgatg 293  Q
    |||||||||||||| |||  || |||||| ||| |||||||||||||||||||||||| ||||    
T  22348 tgctgcctatgttgttgtc-gtctattaattaaactgcatgagtcggtctaagatgaaagatg 22287  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 339990 - 340049
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||| ||| |||||||||||| |||  |||  ||||||||||||||||||||||||||||    
T  339990 tgttttgtatactgcctatgttgttgt--gttatttaactaagctgcatgagtcggtctaag 340049  T

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Target: scaffold1419 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 226 - 145
Alignment:
Q  99 cagtaagcctgaattatatgatttgatctattaaataatgtgatattaatgtatatgtattacatgaattatatatgatgtt 180  Q
    ||||||||||||  || |||||||||| |  | ||||||||||||| | |||||||| ||||  |||||| |||||||||||    
T  226 cagtaagcctgatatagatgatttgatgttgttaataatgtgatataattgtatatgcattatgtgaattttatatgatgtt 145  T

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Target: scaffold0396 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 1970 - 1914
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaa 282  Q
    ||||| ||||||||||||||||| |||| |||||| ||||||||||| |||| |||||    
T  1970 tttatgtgctgcctatgttgctg-ttgtatattaattaagctgcatgtgtcgttctaa 1914  T

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Target: scaffold0293 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 17570 - 17518
Alignment:
Q  233 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||||| ||||||||| || |||||| ||||||||||| ||||||||||||||    
T  17570 ctgcctaagttgctgtt-gtatattaattaagctgcatgtgtcggtctaagatg 17518  T

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Target: scaffold0282 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 18212 - 18272
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| |||||||||||||| |||| || |||||| |||| |||||| ||||||||||||||    
T  18212 tttatgtgctgcctatgttgttgtt-gtatattaattaagttgcatgtgtcggtctaagatg 18272  T

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Target: scaffold0145 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 33022 - 32962
Alignment:
Q  221 ctgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaa 282  Q
    ||||||| ||| |||||||||||||| || |||  |||| ||||||||||||||||||||||    
T  33022 ctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagtcggtctaa 32962  T

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Target: scaffold0114 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 15505 - 15565
Alignment:
Q  222 tgttttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 283  Q
    |||||| ||| |||||||||||||| || |||  |||||||||||||||||||| |||||||    
T  15505 tgttttgtatactgcctatgttgctctt-gttatttaactaagctgcatgagtcagtctaag 15565  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 221251 - 221311
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagatg 286  Q
    ||||| |||||||||||| ||||||  | |||||| ||||||||||| ||||||||||||||    
T  221251 tttatgtgctgcctatgtagctgtta-tatattaattaagctgcatgtgtcggtctaagatg 221311  T

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Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 225576 - 225512
Alignment:
Q  133 ataatgtgatattaatgtatatgtattacatgaattatatatg-atg-ttgggatgttgttgatt 195  Q
    |||||||||||| | |||||||| ||||| ||||||||||||| ||| ||| |||||||||||||    
T  225576 ataatgtgatataattgtatatgcattacttgaattatatatgaatgtttgagatgttgttgatt 225512  T

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Target: scaffold1539 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 1014 - 955
Alignment:
Q  225 tttatatgctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagat 285  Q
    ||||| || |||||||||||||||| || |||||| ||||||||||| |||||| ||||||    
T  1014 tttatgtgttgcctatgttgctgtt-gtatattaattaagctgcatgtgtcggtttaagat 955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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