View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0678_high_17 (Length: 291)

Name: NF0678_high_17
Description: NF0678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0678_high_17
NF0678_high_17
[»] chr3 (70 HSPs)
chr3 (189-291)||(19774379-19774481)
chr3 (189-291)||(16751683-16751800)
chr3 (217-291)||(27411119-27411193)
chr3 (191-291)||(11069099-11069216)
chr3 (191-291)||(7108647-7108764)
chr3 (191-291)||(7112582-7112699)
chr3 (191-291)||(11166569-11166686)
chr3 (191-291)||(14498356-14498473)
chr3 (191-291)||(22320615-22320732)
chr3 (191-291)||(22335670-22335787)
chr3 (191-291)||(28948793-28948910)
chr3 (191-291)||(30064798-30064915)
chr3 (191-291)||(55021936-55022053)
chr3 (191-241)||(15963857-15963907)
chr3 (191-241)||(15967781-15967831)
chr3 (191-241)||(15971705-15971755)
chr3 (191-291)||(4108280-4108397)
chr3 (191-291)||(4112132-4112249)
chr3 (191-291)||(15616586-15616703)
chr3 (217-291)||(17318178-17318254)
chr3 (231-291)||(14159856-14159918)
chr3 (231-291)||(15963942-15964004)
chr3 (231-291)||(15967866-15967928)
chr3 (231-291)||(15971790-15971852)
chr3 (43-85)||(16751903-16751945)
chr3 (247-291)||(14067614-14067658)
chr3 (245-291)||(31097904-31097950)
chr3 (44-85)||(10834943-10834984)
chr3 (44-85)||(11912463-11912504)
chr3 (44-85)||(12853365-12853406)
chr3 (44-85)||(14670062-14670103)
chr3 (44-85)||(16795539-16795580)
chr3 (43-85)||(19774233-19774275)
chr3 (44-81)||(3802006-3802043)
chr3 (44-85)||(4590162-4590203)
chr3 (44-85)||(8491734-8491775)
chr3 (44-85)||(13435854-13435895)
chr3 (44-81)||(14764801-14764838)
chr3 (44-85)||(16840205-16840246)
chr3 (44-81)||(18899489-18899526)
chr3 (44-85)||(18933357-18933398)
chr3 (44-81)||(20249855-20249892)
chr3 (44-81)||(29545944-29545981)
chr3 (44-85)||(30064421-30064462)
chr3 (44-81)||(54519633-54519670)
chr3 (47-83)||(8928871-8928907)
chr3 (44-76)||(9532294-9532326)
chr3 (44-76)||(12304210-12304242)
chr3 (200-239)||(855751-855790)
chr3 (242-277)||(3833380-3833415)
chr3 (200-239)||(16369070-16369109)
chr3 (200-235)||(16909543-16909578)
chr3 (43-85)||(5219882-5219924)
chr3 (43-85)||(7108273-7108315)
chr3 (43-85)||(7112208-7112250)
chr3 (245-291)||(7574705-7574751)
chr3 (43-85)||(11068648-11068690)
chr3 (43-85)||(11853741-11853783)
chr3 (43-85)||(14497982-14498024)
chr3 (43-85)||(22320164-22320206)
chr3 (43-85)||(22335219-22335261)
chr3 (43-85)||(55021411-55021453)
chr3 (44-85)||(17318511-17318552)
chr3 (44-85)||(37440682-37440723)
chr3 (245-277)||(2898204-2898236)
chr3 (43-75)||(11301677-11301709)
chr3 (43-75)||(14664460-14664492)
chr3 (45-81)||(23372549-23372585)
chr3 (44-76)||(38312868-38312900)
chr3 (45-81)||(51299570-51299606)
[»] chr6 (59 HSPs)
chr6 (189-291)||(31479258-31479360)
chr6 (217-291)||(16623013-16623087)
chr6 (191-291)||(11565810-11565927)
chr6 (191-291)||(12619883-12620000)
chr6 (217-291)||(16759226-16759302)
chr6 (191-251)||(8242822-8242882)
chr6 (191-241)||(19869547-19869597)
chr6 (191-241)||(23394001-23394051)
chr6 (191-241)||(23413909-23413959)
chr6 (217-291)||(23394057-23394133)
chr6 (191-291)||(23988908-23989025)
chr6 (231-291)||(19869632-19869694)
chr6 (231-291)||(22948120-22948182)
chr6 (231-291)||(22952076-22952138)
chr6 (231-291)||(23413979-23414041)
chr6 (231-291)||(23870564-23870626)
chr6 (231-291)||(23874520-23874582)
chr6 (191-241)||(16759185-16759235)
chr6 (189-241)||(16622970-16623022)
chr6 (191-244)||(22948065-22948118)
chr6 (191-244)||(22952021-22952074)
chr6 (191-244)||(23870509-23870562)
chr6 (191-244)||(23874465-23874518)
chr6 (43-85)||(16622870-16622912)
chr6 (43-85)||(31479464-31479506)
chr6 (250-291)||(14471317-14471358)
chr6 (44-85)||(23400714-23400755)
chr6 (44-85)||(2076322-2076363)
chr6 (250-291)||(8242898-8242939)
chr6 (44-85)||(18918582-18918623)
chr6 (44-85)||(23538017-23538058)
chr6 (44-85)||(25737928-25737969)
chr6 (44-81)||(27222868-27222905)
chr6 (44-85)||(34297774-34297815)
chr6 (44-76)||(12941257-12941289)
chr6 (200-239)||(21740434-21740473)
chr6 (43-85)||(8242447-8242489)
chr6 (43-85)||(11565436-11565478)
chr6 (43-85)||(11716942-11716984)
chr6 (43-85)||(12620335-12620377)
chr6 (222-277)||(20908362-20908419)
chr6 (43-85)||(23988338-23988380)
chr6 (43-85)||(27555574-27555616)
chr6 (222-276)||(16523800-16523856)
chr6 (44-85)||(18953485-18953526)
chr6 (222-291)||(27567996-27568068)
chr6 (44-72)||(1254195-1254223)
chr6 (45-81)||(4475832-4475868)
chr6 (245-277)||(16740916-16740948)
chr6 (245-277)||(19298105-19298137)
chr6 (43-75)||(19869222-19869254)
chr6 (43-75)||(22075402-22075434)
chr6 (43-75)||(22947702-22947734)
chr6 (43-75)||(22951658-22951690)
chr6 (43-75)||(23393676-23393708)
chr6 (43-75)||(23413584-23413616)
chr6 (43-75)||(23870146-23870178)
chr6 (43-75)||(23874102-23874134)
chr6 (44-76)||(28290905-28290937)
[»] chr5 (40 HSPs)
chr5 (189-291)||(10751998-10752100)
chr5 (191-291)||(18355222-18355339)
chr5 (191-291)||(20294849-20294966)
chr5 (191-291)||(19473725-19473842)
chr5 (217-291)||(40724577-40724653)
chr5 (231-291)||(11219969-11220031)
chr5 (231-291)||(11224555-11224617)
chr5 (231-291)||(11228378-11228440)
chr5 (231-291)||(11230367-11230429)
chr5 (43-85)||(10751852-10751894)
chr5 (43-85)||(15238119-15238161)
chr5 (43-85)||(22108451-22108493)
chr5 (203-241)||(40724644-40724682)
chr5 (43-82)||(9774975-9775014)
chr5 (43-85)||(20912254-20912296)
chr5 (44-82)||(22120596-22120634)
chr5 (44-81)||(19510498-19510535)
chr5 (44-81)||(22339048-22339085)
chr5 (44-81)||(23113408-23113445)
chr5 (44-81)||(28372087-28372124)
chr5 (44-85)||(36459584-36459625)
chr5 (44-81)||(37600014-37600051)
chr5 (44-81)||(38146424-38146461)
chr5 (191-251)||(11226481-11226540)
chr5 (45-81)||(41878657-41878693)
chr5 (242-277)||(33408934-33408969)
chr5 (43-85)||(18354832-18354874)
chr5 (200-238)||(18770395-18770433)
chr5 (43-85)||(19474174-19474216)
chr5 (43-85)||(20294549-20294591)
chr5 (217-276)||(23439635-23439696)
chr5 (217-276)||(23451002-23451063)
chr5 (44-81)||(22335518-22335555)
chr5 (44-81)||(22749197-22749234)
chr5 (43-75)||(11219590-11219622)
chr5 (43-75)||(11224176-11224208)
chr5 (43-75)||(11226192-11226224)
chr5 (43-75)||(11227998-11228030)
chr5 (43-75)||(11229988-11230020)
chr5 (245-277)||(17919555-17919587)
[»] chr1 (34 HSPs)
chr1 (191-291)||(52634757-52634859)
chr1 (189-291)||(41389442-41389559)
chr1 (217-291)||(39244994-39245068)
chr1 (217-291)||(39248549-39248623)
chr1 (191-291)||(1009671-1009788)
chr1 (191-291)||(1926194-1926311)
chr1 (191-291)||(20925208-20925325)
chr1 (191-251)||(16376502-16376562)
chr1 (191-241)||(33796491-33796541)
chr1 (232-290)||(33796577-33796637)
chr1 (43-85)||(39245172-39245214)
chr1 (43-85)||(39248727-39248769)
chr1 (43-85)||(41389666-41389708)
chr1 (44-85)||(41801280-41801321)
chr1 (245-291)||(16376445-16376491)
chr1 (44-85)||(22132100-22132141)
chr1 (200-239)||(22831790-22831829)
chr1 (44-81)||(16370961-16370998)
chr1 (44-85)||(20230140-20230181)
chr1 (44-85)||(21406289-21406330)
chr1 (46-85)||(11809951-11809990)
chr1 (242-277)||(46975196-46975231)
chr1 (43-85)||(1009297-1009339)
chr1 (43-85)||(1926797-1926839)
chr1 (245-291)||(3705451-3705497)
chr1 (43-85)||(16376817-16376859)
chr1 (43-85)||(20925811-20925853)
chr1 (43-85)||(33796068-33796110)
chr1 (245-291)||(36819659-36819705)
chr1 (43-85)||(52634303-52634345)
chr1 (202-239)||(42865679-42865716)
chr1 (45-81)||(32649104-32649140)
chr1 (189-221)||(39245079-39245111)
chr1 (189-221)||(39248634-39248666)
[»] scaffold0349 (2 HSPs)
scaffold0349 (191-291)||(11465-11567)
scaffold0349 (43-85)||(11086-11128)
[»] chr7 (64 HSPs)
chr7 (189-291)||(18424416-18424534)
chr7 (191-291)||(32057-32174)
chr7 (191-291)||(12705708-12705825)
chr7 (191-251)||(12713872-12713932)
chr7 (191-251)||(18278391-18278451)
chr7 (191-251)||(18282354-18282414)
chr7 (191-241)||(45171169-45171219)
chr7 (191-291)||(12717696-12717813)
chr7 (191-291)||(12722607-12722724)
chr7 (231-291)||(71848-71910)
chr7 (231-291)||(75957-76019)
chr7 (191-241)||(71930-71980)
chr7 (191-241)||(76039-76089)
chr7 (242-291)||(45171072-45171121)
chr7 (43-85)||(18424270-18424312)
chr7 (242-291)||(12713940-12713989)
chr7 (242-291)||(18278459-18278508)
chr7 (242-291)||(18282422-18282471)
chr7 (44-85)||(7520217-7520258)
chr7 (44-85)||(10607322-10607363)
chr7 (44-85)||(11660318-11660359)
chr7 (44-85)||(13891666-13891707)
chr7 (44-85)||(13892049-13892090)
chr7 (44-85)||(20486778-20486819)
chr7 (44-85)||(39268315-39268356)
chr7 (200-235)||(9752124-9752159)
chr7 (225-276)||(2759785-2759838)
chr7 (44-85)||(9752509-9752550)
chr7 (44-81)||(14420823-14420860)
chr7 (44-85)||(15213084-15213125)
chr7 (44-81)||(16005040-16005077)
chr7 (44-85)||(16582457-16582498)
chr7 (200-241)||(16582849-16582890)
chr7 (44-85)||(18301387-18301428)
chr7 (44-81)||(18606374-18606411)
chr7 (44-81)||(18871333-18871370)
chr7 (43-76)||(23666463-23666496)
chr7 (44-85)||(25928373-25928414)
chr7 (44-85)||(26291193-26291234)
chr7 (44-85)||(39721232-39721273)
chr7 (44-76)||(146536-146568)
chr7 (202-251)||(32216941-32216992)
chr7 (202-241)||(9702936-9702975)
chr7 (242-277)||(13148861-13148896)
chr7 (46-85)||(16185562-16185601)
chr7 (200-239)||(17138527-17138566)
chr7 (43-85)||(31760-31802)
chr7 (43-85)||(2833483-2833525)
chr7 (245-291)||(12317834-12317880)
chr7 (43-85)||(12706124-12706166)
chr7 (43-85)||(12713575-12713617)
chr7 (43-85)||(12722233-12722275)
chr7 (43-85)||(16908511-16908553)
chr7 (43-85)||(18281993-18282035)
chr7 (44-81)||(10897902-10897939)
chr7 (222-276)||(14429528-14429584)
chr7 (44-85)||(15083262-15083303)
chr7 (44-72)||(838148-838176)
chr7 (44-72)||(1203328-1203356)
chr7 (245-277)||(9593056-9593088)
chr7 (247-291)||(15605624-15605668)
chr7 (44-72)||(16109990-16110018)
chr7 (43-75)||(18278029-18278061)
chr7 (43-75)||(45171512-45171544)
[»] chr4 (47 HSPs)
chr4 (189-291)||(15223727-15223845)
chr4 (191-291)||(4562326-4562443)
chr4 (191-291)||(5757851-5757968)
chr4 (191-291)||(9555478-9555595)
chr4 (191-291)||(14758467-14758584)
chr4 (191-291)||(14955232-14955349)
chr4 (191-291)||(33741248-33741365)
chr4 (191-241)||(12486603-12486653)
chr4 (231-291)||(12486688-12486750)
chr4 (231-291)||(25688906-25688968)
chr4 (43-85)||(15223581-15223623)
chr4 (191-244)||(25688851-25688904)
chr4 (202-241)||(13813698-13813737)
chr4 (195-241)||(13818210-13818256)
chr4 (44-85)||(631749-631790)
chr4 (44-85)||(13813834-13813875)
chr4 (44-85)||(13818322-13818363)
chr4 (44-85)||(17052447-17052488)
chr4 (44-85)||(22634928-22634969)
chr4 (44-85)||(23996968-23997009)
chr4 (44-85)||(24048386-24048427)
chr4 (45-85)||(12422980-12423020)
chr4 (44-85)||(10711861-10711902)
chr4 (44-85)||(10925631-10925672)
chr4 (222-291)||(15353692-15353764)
chr4 (44-81)||(15533255-15533292)
chr4 (44-81)||(18211640-18211677)
chr4 (202-235)||(22634750-22634783)
chr4 (44-85)||(27532788-27532829)
chr4 (44-81)||(49549088-49549125)
chr4 (44-76)||(36036988-36037020)
chr4 (202-241)||(13569175-13569214)
chr4 (43-85)||(4562775-4562817)
chr4 (43-85)||(5758457-5758499)
chr4 (43-85)||(9555104-9555146)
chr4 (43-85)||(12486306-12486348)
chr4 (43-85)||(14758993-14759035)
chr4 (43-85)||(14955761-14955803)
chr4 (43-85)||(17807089-17807131)
chr4 (43-85)||(20163900-20163942)
chr4 (43-85)||(25688477-25688519)
chr4 (43-85)||(33740871-33740913)
chr4 (200-241)||(15125505-15125546)
chr4 (44-85)||(20158449-20158490)
chr4 (194-235)||(23996574-23996615)
chr4 (245-277)||(1952124-1952156)
chr4 (44-72)||(30145819-30145847)
[»] scaffold0525 (1 HSPs)
scaffold0525 (191-291)||(4899-5016)
[»] scaffold0372 (2 HSPs)
scaffold0372 (191-291)||(6060-6177)
scaffold0372 (43-85)||(6322-6364)
[»] scaffold0061 (1 HSPs)
scaffold0061 (191-291)||(68221-68338)
[»] chr8 (43 HSPs)
chr8 (191-291)||(21977673-21977790)
chr8 (191-291)||(22110999-22111116)
chr8 (191-291)||(43250759-43250876)
chr8 (191-251)||(21973639-21973699)
chr8 (191-241)||(18863773-18863823)
chr8 (191-239)||(30941235-30941283)
chr8 (231-291)||(21829017-21829079)
chr8 (231-291)||(30941151-30941213)
chr8 (191-241)||(21829099-21829149)
chr8 (231-291)||(18863676-18863738)
chr8 (242-289)||(21973584-21973631)
chr8 (44-85)||(21328602-21328643)
chr8 (44-85)||(44385835-44385876)
chr8 (44-85)||(21386195-21386236)
chr8 (44-85)||(23427862-23427903)
chr8 (44-85)||(23913301-23913342)
chr8 (224-291)||(20856826-20856894)
chr8 (200-235)||(19259961-19259996)
chr8 (200-239)||(20466450-20466489)
chr8 (46-85)||(21967994-21968033)
chr8 (46-85)||(21980834-21980873)
chr8 (46-85)||(21985817-21985856)
chr8 (46-85)||(22000780-22000819)
chr8 (46-85)||(22009198-22009237)
chr8 (242-277)||(23847379-23847414)
chr8 (46-85)||(34950124-34950163)
chr8 (43-85)||(14399094-14399136)
chr8 (43-85)||(21974185-21974227)
chr8 (43-85)||(21978295-21978337)
chr8 (222-277)||(39095324-39095381)
chr8 (47-85)||(42560883-42560921)
chr8 (43-85)||(43250237-43250279)
chr8 (44-85)||(21409937-21409978)
chr8 (44-85)||(21804429-21804470)
chr8 (44-85)||(44494225-44494266)
chr8 (46-82)||(11252087-11252123)
chr8 (245-277)||(16231838-16231870)
chr8 (43-75)||(18864116-18864148)
chr8 (201-241)||(21169189-21169229)
chr8 (43-75)||(21829472-21829504)
chr8 (245-277)||(22044594-22044626)
chr8 (44-72)||(27942700-27942728)
chr8 (43-75)||(30941576-30941608)
[»] chr2 (33 HSPs)
chr2 (191-291)||(10102849-10102966)
chr2 (191-291)||(24629520-24629637)
chr2 (191-291)||(24648303-24648420)
chr2 (191-291)||(27380393-27380510)
chr2 (191-291)||(27384439-27384556)
chr2 (191-291)||(27600780-27600897)
chr2 (191-291)||(30346056-30346173)
chr2 (191-241)||(1282384-1282434)
chr2 (191-241)||(41532111-41532161)
chr2 (231-291)||(41532014-41532076)
chr2 (231-291)||(1282454-1282516)
chr2 (44-84)||(21074510-21074550)
chr2 (44-81)||(6481820-6481857)
chr2 (44-81)||(6485287-6485324)
chr2 (44-81)||(9240710-9240747)
chr2 (44-85)||(9784030-9784071)
chr2 (44-81)||(19663563-19663600)
chr2 (44-81)||(20260293-20260330)
chr2 (200-241)||(40622674-40622715)
chr2 (241-277)||(19928866-19928902)
chr2 (245-291)||(24174485-24174531)
chr2 (43-85)||(24630049-24630091)
chr2 (43-85)||(24645186-24645228)
chr2 (43-85)||(24647962-24648004)
chr2 (43-85)||(27380995-27381037)
chr2 (43-85)||(27384965-27385007)
chr2 (43-85)||(27600406-27600448)
chr2 (43-85)||(30346659-30346701)
chr2 (222-276)||(37524328-37524384)
chr2 (43-75)||(10103308-10103340)
chr2 (43-75)||(12902618-12902650)
chr2 (43-75)||(24647129-24647161)
chr2 (43-75)||(41532454-41532486)
[»] scaffold0157 (3 HSPs)
scaffold0157 (191-241)||(33824-33874)
scaffold0157 (231-291)||(33727-33789)
scaffold0157 (43-85)||(34129-34171)
[»] scaffold0141 (3 HSPs)
scaffold0141 (231-291)||(15161-15223)
scaffold0141 (191-241)||(15243-15293)
scaffold0141 (43-75)||(15586-15618)
[»] scaffold0029 (2 HSPs)
scaffold0029 (231-291)||(79576-79638)
scaffold0029 (44-85)||(62841-62882)
[»] scaffold1220 (1 HSPs)
scaffold1220 (222-291)||(1451-1522)
[»] scaffold0599 (1 HSPs)
scaffold0599 (44-85)||(4157-4198)
[»] scaffold0575 (1 HSPs)
scaffold0575 (44-85)||(6962-7003)
[»] scaffold0293 (1 HSPs)
scaffold0293 (44-85)||(21341-21382)
[»] scaffold0124 (1 HSPs)
scaffold0124 (44-85)||(25569-25610)
[»] scaffold0031 (1 HSPs)
scaffold0031 (44-85)||(37204-37245)
[»] scaffold0013 (1 HSPs)
scaffold0013 (44-85)||(74333-74374)
[»] scaffold0550 (1 HSPs)
scaffold0550 (222-291)||(7135-7206)
[»] scaffold0080 (4 HSPs)
scaffold0080 (45-85)||(28509-28549)
scaffold0080 (45-85)||(33974-34014)
scaffold0080 (200-239)||(19114-19153)
scaffold0080 (200-239)||(55850-55889)
[»] scaffold0001 (4 HSPs)
scaffold0001 (222-277)||(422920-422978)
scaffold0001 (202-241)||(204498-204537)
scaffold0001 (245-291)||(173003-173049)
scaffold0001 (245-277)||(178706-178738)
[»] scaffold1873 (1 HSPs)
scaffold1873 (195-232)||(848-885)
[»] scaffold1427 (1 HSPs)
scaffold1427 (44-81)||(236-273)
[»] scaffold0842 (1 HSPs)
scaffold0842 (44-81)||(5278-5315)
[»] scaffold0380 (1 HSPs)
scaffold0380 (44-85)||(4010-4051)
[»] scaffold0337 (1 HSPs)
scaffold0337 (44-81)||(10827-10864)
[»] scaffold0139 (1 HSPs)
scaffold0139 (44-85)||(23939-23980)
[»] scaffold0111 (1 HSPs)
scaffold0111 (200-241)||(32059-32100)
[»] scaffold0109 (1 HSPs)
scaffold0109 (44-85)||(37199-37240)
[»] scaffold0026 (1 HSPs)
scaffold0026 (44-81)||(109637-109674)
[»] scaffold0012 (1 HSPs)
scaffold0012 (44-81)||(224148-224185)
[»] scaffold0003 (1 HSPs)
scaffold0003 (222-272)||(414454-414506)
[»] scaffold0819 (1 HSPs)
scaffold0819 (200-235)||(1793-1828)
[»] scaffold0439 (1 HSPs)
scaffold0439 (222-277)||(10694-10752)
[»] scaffold0210 (4 HSPs)
scaffold0210 (200-239)||(22303-22342)
scaffold0210 (200-239)||(30195-30234)
scaffold0210 (207-239)||(22271-22303)
scaffold0210 (207-239)||(30163-30195)
[»] scaffold0193 (1 HSPs)
scaffold0193 (242-277)||(9127-9162)
[»] scaffold0081 (3 HSPs)
scaffold0081 (202-241)||(23298-23337)
scaffold0081 (202-241)||(38722-38761)
scaffold0081 (212-241)||(14287-14316)
[»] scaffold0486 (1 HSPs)
scaffold0486 (43-85)||(8612-8654)
[»] scaffold0120 (1 HSPs)
scaffold0120 (245-291)||(20362-20408)
[»] scaffold0044 (1 HSPs)
scaffold0044 (245-291)||(18897-18943)
[»] scaffold0028 (1 HSPs)
scaffold0028 (43-85)||(60327-60369)
[»] scaffold0017 (2 HSPs)
scaffold0017 (222-277)||(15610-15667)
scaffold0017 (222-277)||(20132-20189)
[»] scaffold0015 (1 HSPs)
scaffold0015 (245-291)||(195311-195357)
[»] scaffold0574 (1 HSPs)
scaffold0574 (212-241)||(8279-8308)
[»] scaffold0327 (1 HSPs)
scaffold0327 (44-81)||(18859-18896)
[»] scaffold0142 (1 HSPs)
scaffold0142 (44-85)||(8741-8782)
[»] scaffold0004 (1 HSPs)
scaffold0004 (202-239)||(69409-69446)
[»] scaffold1852 (1 HSPs)
scaffold1852 (43-75)||(832-864)
[»] scaffold0544 (1 HSPs)
scaffold0544 (45-81)||(3522-3558)
[»] scaffold0410 (1 HSPs)
scaffold0410 (43-75)||(14879-14911)


Alignment Details
Target: chr3 (Bit Score: 99; Significance: 7e-49; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 19774379 - 19774481
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatca 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19774379 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctttgataaaaaattaccaagtaatcacaacgttcgatca 19774478  T
Q  289 tca 291  Q
    |||    
T  19774479 tca 19774481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 16751800 - 16751683
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca---------------atagcatctttgataaacaattaccaagtaat 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||    
T  16751800 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacatagtcatcttaaacaatagcatctttgataaacaattaccaagtaat 16751701  T
Q  274 cacaacgttcgatcatca 291  Q
    ||||||||||||||||||    
T  16751700 cacaacgttcgatcatca 16751683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 27411193 - 27411119
Alignment:
Q  217 atcttcaacataaacatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  27411193 atcttaaacataatcatcttaaacaataacatctttgataaacaattaccaagtaatcacaacattcgatcatca 27411119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 11069099 - 11069216
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  11069099 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 11069198  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  11069199 cacaacattcgatcatca 11069216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 7108647 - 7108764
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  7108647 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 7108746  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  7108747 cacaacattcgatcatca 7108764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 7112582 - 7112699
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  7112582 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 7112681  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  7112682 cacaacattcgatcatca 7112699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 11166686 - 11166569
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  11166686 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 11166587  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  11166586 cacaacattcgatcatca 11166569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 14498356 - 14498473
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  14498356 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaatatcatagcatctttgataaacaattaccaagtaat 14498455  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  14498456 cacaacattcgatcatca 14498473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 22320615 - 22320732
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  22320615 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 22320714  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  22320715 cacaacattcgatcatca 22320732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 22335670 - 22335787
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  22335670 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 22335769  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  22335770 cacaacattcgatcatca 22335787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 28948793 - 28948910
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  28948793 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 28948892  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  28948893 cacaacattcgatcatca 28948910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 30064798 - 30064915
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  30064798 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 30064897  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  30064898 cacaacattcgatcatca 30064915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 55021936 - 55022053
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  55021936 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 55022035  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  55022036 cacaacattcgatcatca 55022053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 15963857 - 15963907
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15963857 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 15963907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 15967781 - 15967831
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15967781 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 15967831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 15971705 - 15971755
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15971705 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 15971755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 4108397 - 4108280
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  4108397 tactaacaccaaagtcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 4108298  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  4108297 cacaacattcgatcatca 4108280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 4112249 - 4112132
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  4112249 tactaacaccaaagtcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 4112150  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  4112149 cacaacattcgatcatca 4112132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 15616586 - 15616703
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  15616586 tactaacaccaaaattaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 15616685  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  15616686 cacaacattcgatcatca 15616703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 17318254 - 17318178
Alignment:
Q  217 atcttcaacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||| ||||||| |||||||||||  ||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  17318254 atcttaaacataatcatcttaaacatcatagcatctttgataaacaattatcaagtaatcacaactttcgatcatca 17318178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 14159918 - 14159856
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14159918 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 14159856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 15963942 - 15964004
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15963942 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 15964004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 15967866 - 15967928
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15967866 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 15967928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 15971790 - 15971852
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15971790 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 15971852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 16751945 - 16751903
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16751945 acatcatcaagtacatttaacaactcatagataatatcatgta 16751903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 14067658 - 14067614
Alignment:
Q  247 atctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  14067658 atctttgataaacaattaccaagtaatcacaacattcgatcatca 14067614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 31097950 - 31097904
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  31097950 gcatctttgataaacaattaccaagtaatcacaacattcaatcatca 31097904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 10834984 - 10834943
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  10834984 catcatcaagtacatttaacaactcatagataacatcatgta 10834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 11912463 - 11912504
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  11912463 catcatcaagtacatttaacaactcatagataacatcatgta 11912504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 12853406 - 12853365
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  12853406 catcatcaagtacatttaacaactcatagataacatcatgta 12853365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 14670062 - 14670103
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  14670062 catcatcaagtacatttaacaactcatagataacatcatgta 14670103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 16795539 - 16795580
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  16795539 catcatcaagtacatttaacaactcatagataacatcatgta 16795580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 19774233 - 19774275
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  19774233 acatcatcaagtacatttaacaactcacagacaatatcatgta 19774275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 3802006 - 3802043
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  3802006 catcatcaagtacatttaacaactcatagataacatca 3802043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 4590203 - 4590162
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  4590203 catcatcaagtacatttaacaactcctagataacatcatgta 4590162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 8491775 - 8491734
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  8491775 catcatcaagtacatttaacaactcctagataacatcatgta 8491734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 13435854 - 13435895
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||| |||| ||||||||    
T  13435854 catcatcaagtacatttaacaactcatatataacatcatgta 13435895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 14764838 - 14764801
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  14764838 catcatcaagtacatttaacaactcatagataacatca 14764801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 16840246 - 16840205
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  16840246 catcatcaaatacatttaacaactcatagataaaatcatgta 16840205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 18899489 - 18899526
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18899489 catcatcaagtacatttaacaactcatagataacatca 18899526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 18933398 - 18933357
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  18933398 catcatcaagtacacttaacaactcatagataacatcatgta 18933357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 20249892 - 20249855
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  20249892 catcatcaagtacatttaacaactcatagataacatca 20249855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 29545981 - 29545944
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  29545981 catcatcaagtacatttaacaactcatagataacatca 29545944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 30064421 - 30064462
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  30064421 catcatcaagtacacttaacaactcatagataacatcatgta 30064462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 54519633 - 54519670
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  54519633 catcatcaagtacatttaacaactcatagataacatca 54519670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 8928907 - 8928871
Alignment:
Q  47 catcaagtacatttaacaactcatagataatatcatg 83  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8928907 catcaagtacatttaacaactcatagataacatcatg 8928871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 9532294 - 9532326
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataa 76  Q
    |||||||||||||||||||||||||||||||||    
T  9532294 catcatcaagtacatttaacaactcatagataa 9532326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 12304210 - 12304242
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataa 76  Q
    |||||||||||||||||||||||||||||||||    
T  12304210 catcatcaagtacatttaacaactcatagataa 12304242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 855751 - 855790
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  855751 cataattaacatcataaatcttcaacataagcatcttaaa 855790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 3833380 - 3833415
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcaca 277  Q
    ||||||||||||||||||||||| ||||||||||||    
T  3833380 atagcatctttgataaacaattatcaagtaatcaca 3833415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 16369070 - 16369109
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  16369070 cataattaacatcataaatcttcaacataagcatcttaaa 16369109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 16909543 - 16909578
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatct 235  Q
    |||||| |||||||||||||||||||||||||||||    
T  16909543 cataattaacatcataaatcttcaacataaacatct 16909578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 5219882 - 5219924
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  5219882 acatcatcaagtacacttaacaactcatagatatcatcatgta 5219924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 7108273 - 7108315
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  7108273 acatcatcaagtacacttaacaactcatagatatcatcatgta 7108315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 7112208 - 7112250
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  7112208 acatcatcaagtacacttaacaactcatagatatcatcatgta 7112250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 7574705 - 7574751
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  7574705 gcatctttgataaacaattatcaagtaatcacagctttcaatcatca 7574751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 11068648 - 11068690
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  11068648 acatcatcaagtacacttaacaactcatagatatcatcatgta 11068690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 11853741 - 11853783
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  11853741 acatcatcaagtacacttaacaactcatagatatcatcatgta 11853783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 14497982 - 14498024
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  14497982 acatcatcaagtacacttaacaactcatagatatcatcatgta 14498024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 22320164 - 22320206
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  22320164 acatcatcaagtacacttaacaactcatagatatcatcatgta 22320206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 22335219 - 22335261
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  22335219 acatcatcaagtacacttaacaactcatagatatcatcatgta 22335261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 55021411 - 55021453
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  55021411 acatcatcaagtacacttaacaactcatagatatcatcatgta 55021453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 17318552 - 17318511
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| |||||||  |||||||    
T  17318552 catcatcaagtacatttaacaactcctagataacttcatgta 17318511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 37440723 - 37440682
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  37440723 catcatcaagtacacttaacaactcatagatatcatcatgta 37440682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Complemental strand, 2898236 - 2898204
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||| ||||||||||||    
T  2898236 gcatctttgataaacaattatcaagtaatcaca 2898204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 11301709 - 11301677
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  11301709 acatcatcaagtacacttaacaactcatagata 11301677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 14664460 - 14664492
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  14664460 acatcatcaagtacacttaacaactcatagata 14664492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 23372585 - 23372549
Alignment:
Q  45 atcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  23372585 atcatcaagtacatttaacaactcataaataacatca 23372549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 38312900 - 38312868
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataa 76  Q
    |||||||||||||||||||| ||||||||||||    
T  38312900 catcatcaagtacatttaaccactcatagataa 38312868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 51299570 - 51299606
Alignment:
Q  45 atcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  51299570 atcatcaagtacatttaacaactcataaataacatca 51299606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 31479360 - 31479258
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatca 288  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31479360 cgtactaacaccataatcaacatcataaatcttcaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacattcgatca 31479261  T
Q  289 tca 291  Q
    |||    
T  31479260 tca 31479258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 16623013 - 16623087
Alignment:
Q  217 atcttcaacataaacatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16623013 atcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 16623087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 11565810 - 11565927
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  11565810 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 11565909  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  11565910 cacaacattcgatcatca 11565927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 12620000 - 12619883
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  12620000 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 12619901  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  12619900 cacaacattcgatcatca 12619883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 16759226 - 16759302
Alignment:
Q  217 atcttcaacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||| ||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16759226 atcttaaacataatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 16759302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 8242822 - 8242882
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctt 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8242822 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatctt 8242882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 19869547 - 19869597
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19869547 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 19869597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 23394001 - 23394051
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23394001 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 23394051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 23413909 - 23413959
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23413909 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 23413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 23394057 - 23394133
Alignment:
Q  217 atcttcaacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||| ||||| | |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23394057 atcttaaacattatcatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 23394133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 23988908 - 23989025
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  23988908 tactaacaccaaaatcaacatcataaatcttaaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 23989007  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  23989008 cacaacattcgatcatca 23989025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 19869632 - 19869694
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19869632 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 19869694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 22948120 - 22948182
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22948120 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 22948182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 22952076 - 22952138
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22952076 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 22952138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 23413979 - 23414041
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23413979 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 23414041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 23870564 - 23870626
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23870564 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 23870626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 23874520 - 23874582
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23874520 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 23874582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 16759185 - 16759235
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16759185 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaaca 16759235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 16622970 - 16623022
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  16622970 cgtactaacaccataattaacatcataaatctttaacataaacatcttaaaca 16623022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 22948065 - 22948118
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaata 244  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  22948065 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaata 22948118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 22952021 - 22952074
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaata 244  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  22952021 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaata 22952074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 23870509 - 23870562
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaata 244  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  23870509 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaata 23870562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 23874465 - 23874518
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaata 244  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  23874465 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaata 23874518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 16622870 - 16622912
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  16622870 acatcatcaagtacatttaacaattcatagataatatcatgta 16622912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 31479506 - 31479464
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  31479506 acatcatcaaatacatttaacaactcatagataatatcatgta 31479464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 14471317 - 14471358
Alignment:
Q  250 tttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  14471317 tttgataaacaattaccaagtaatcacaacattcgatcatca 14471358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 23400714 - 23400755
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  23400714 catcatcaagtacatttaacaactcatagataacatcatgta 23400755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 2076322 - 2076363
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  2076322 catcatcaaatacatttaacaactcatagataacatcatgta 2076363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 8242898 - 8242939
Alignment:
Q  250 tttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  8242898 tttgataaacaattagcaagtaatcacaacattcgatcatca 8242939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 18918623 - 18918582
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  18918623 catcatcaagtacatttaacaactcctagataacatcatgta 18918582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 23538017 - 23538058
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  23538017 catcatcaagtacatttaacaactcatagacaacatcatgta 23538058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 25737928 - 25737969
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  25737928 catcatcaagtacatttaccaactcatagataacatcatgta 25737969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 27222868 - 27222905
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  27222868 catcatcaagtacatttaacaactcatagataacatca 27222905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 34297815 - 34297774
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  34297815 catcagcaagtacatttaacaactcatagataacatcatgta 34297774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 12941257 - 12941289
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataa 76  Q
    |||||||||||||||||||||||||||||||||    
T  12941257 catcatcaagtacatttaacaactcatagataa 12941289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 21740473 - 21740434
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  21740473 cataattaacatcataaatattcaacataaacatcttaaa 21740434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 8242447 - 8242489
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  8242447 acatcatcaagtacacttaacaactcatagatatcatcatgta 8242489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 11565436 - 11565478
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  11565436 acatcatcaagtacacttaacaactcatagatatcatcatgta 11565478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 11716984 - 11716942
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  11716984 acatcatcaagtacacttaacaactcatagatatcatcatgta 11716942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 12620377 - 12620335
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  12620377 acatcatcaagtacacttaacaactcatagatatcatcatgta 12620335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 20908419 - 20908362
Alignment:
Q  222 caacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcaca 277  Q
    ||||||||||||||||||||  || |||| ||| ||||||||||| ||||||||||||    
T  20908419 caacataaacatcttaaacatcattgcattttttataaacaattatcaagtaatcaca 20908362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 23988338 - 23988380
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  23988338 acatcatcaagtacacttaacaactcatagatatcatcatgta 23988380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 27555574 - 27555616
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  27555574 acatcatcaagtacacttaacaactcatagatatcatcatgta 27555616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 16523856 - 16523800
Alignment:
Q  222 caacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 276  Q
    ||||||||||||||||||||  || ||||||||||||| ||| || |||||||||||    
T  16523856 caacataaacatcttaaacatcattgcatctttgataatcaaatatcaagtaatcac 16523800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 18953526 - 18953485
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||| | ||||||||    
T  18953526 catcatcaagtacatttaacaactcctagatgacatcatgta 18953485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 27568068 - 27567996
Alignment:
Q  222 caacataaaca-tcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||| |||||||||  || |||||||||||||||||||| |||||| ||||| | ||| |||||||    
T  27568068 caacataaacaatcttaaacataattgcatctttgataaacaattaacaagtattcacatcattcaatcatca 27567996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 72
Target Start/End: Original strand, 1254195 - 1254223
Alignment:
Q  44 catcatcaagtacatttaacaactcatag 72  Q
    |||||||||||||||||||||||||||||    
T  1254195 catcatcaagtacatttaacaactcatag 1254223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 4475832 - 4475868
Alignment:
Q  45 atcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  4475832 atcatcaagtacatttaacaactcataaataacatca 4475868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 16740916 - 16740948
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||| ||||||||||||    
T  16740916 gcatctttgataaacaattatcaagtaatcaca 16740948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 19298105 - 19298137
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||| ||||||||||||    
T  19298105 gcatctttgataaacaattatcaagtaatcaca 19298137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 19869222 - 19869254
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  19869222 acatcatcaagtacacttaacaactcatagata 19869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 22075434 - 22075402
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  22075434 acatcatcaagtacacttaacaactcatagata 22075402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 22947702 - 22947734
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  22947702 acatcatcaagtacacttaacaactcatagata 22947734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 22951658 - 22951690
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  22951658 acatcatcaagtacacttaacaactcatagata 22951690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 23393676 - 23393708
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  23393676 acatcatcaagtacacttaacaactcatagata 23393708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 23413584 - 23413616
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  23413584 acatcatcaagtacacttaacaactcatagata 23413616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 23870146 - 23870178
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  23870146 acatcatcaagtacacttaacaactcatagata 23870178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 23874102 - 23874134
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  23874102 acatcatcaagtacacttaacaactcatagata 23874134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 28290937 - 28290905
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataa 76  Q
    |||||||||||||||||||||||| ||||||||    
T  28290937 catcatcaagtacatttaacaacttatagataa 28290905  T

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Target: chr5 (Bit Score: 91; Significance: 4e-44; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 10751998 - 10752100
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatca 288  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  10751998 cgtactaacaccataatcaacatcataaatcttcaacataatcatcttaaacaatagcatctttgataaacaattatcaagtaatcacaacattcgatca 10752097  T
Q  289 tca 291  Q
    |||    
T  10752098 tca 10752100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 18355222 - 18355339
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  18355222 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatatcgtcttaaacatcatagcatctttgataaacaattaccaagtaat 18355321  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  18355322 cacaacattcgatcatca 18355339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 20294849 - 20294966
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaata-----------------gcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||||||||    
T  20294849 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatggcatctttgataaacaattaccaagtaat 20294948  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  20294949 cacaacattcgatcatca 20294966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 19473842 - 19473725
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||                 ||||||||||||||||||||||||||||||||    
T  19473842 tactaacaccataatcaacatcataaatcttaaacataatcatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 19473743  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  19473742 cacaacattcgatcatca 19473725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 40724653 - 40724577
Alignment:
Q  217 atcttcaacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||| ||||||| |||||||||||  |||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  40724653 atcttaaacataatcatcttaaacatcatagcatctttgctaaacaattaccaagtaatcacaacattcgatcatca 40724577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 11219969 - 11220031
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11219969 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 11220031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 11224555 - 11224617
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11224555 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 11224617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 11228378 - 11228440
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11228378 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 11228440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 11230367 - 11230429
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11230367 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 11230429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 10751852 - 10751894
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10751852 acatcatcaagtacatttaacaactcatagataatatcatgta 10751894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 15238161 - 15238119
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  15238161 acatcatcaagtacatttaacaactcatagataacatcatgta 15238119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 22108493 - 22108451
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  22108493 acatcatcaagtacatttaacaactcatagataacatcatgta 22108451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 40724682 - 40724644
Alignment:
Q  203 aatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40724682 aatcaacatcataaatcttcaacataaacatcttaaaca 40724644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 9774975 - 9775014
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcat 82  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  9774975 acatcatcaagtacatttaacaactcatagataacatcat 9775014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 20912296 - 20912254
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||| ||||||||    
T  20912296 acatcatcaagtacacttaacaactcatagataacatcatgta 20912254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 22120634 - 22120596
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcat 82  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  22120634 catcatcaagtacatttaacaactcatagataacatcat 22120596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 19510498 - 19510535
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19510498 catcatcaagtacatttaacaactcatagataacatca 19510535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 22339048 - 22339085
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  22339048 catcatcaagtacatttaacaactcatagataacatca 22339085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 23113445 - 23113408
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  23113445 catcatcaagtacatttaacaactcatagataacatca 23113408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 28372124 - 28372087
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28372124 catcatcaagtacatttaacaactcatagataacatca 28372087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 36459584 - 36459625
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  36459584 catcattaagtacatttaacaactcatagataacatcatgta 36459625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 37600051 - 37600014
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  37600051 catcatcaagtacatttaacaactcatagataacatca 37600014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 38146461 - 38146424
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  38146461 catcatcaagtacatttaacaactcatagataacatca 38146424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 11226481 - 11226540
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctt 251  Q
    ||||||||||||||||||||| | | ||||| ||||||| |||||||||||||| ||||||    
T  11226481 tactaacaccataatcaacataa-acatcttaaacataatcatcttaaacaatatcatctt 11226540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 41878693 - 41878657
Alignment:
Q  45 atcatcaagtacatttaacaactcatagataatatca 81  Q
    |||||||||||||||||||||||||||||||| ||||    
T  41878693 atcatcaagtacatttaacaactcatagataacatca 41878657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 33408934 - 33408969
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcaca 277  Q
    ||||||||||||||||||||||| ||||||||||||    
T  33408934 atagcatctttgataaacaattatcaagtaatcaca 33408969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 18354832 - 18354874
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  18354832 acatcatcaagtacacttaacaactcatagatatcatcatgta 18354874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 18770433 - 18770395
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaa 238  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  18770433 cataattaacatcataaatcttcaacataagcatcttaa 18770395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 19474216 - 19474174
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  19474216 acatcatcaagtacacttaacaactcatagatatcatcatgta 19474174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 20294549 - 20294591
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  20294549 acatcatcaagtacacttaacaactcatagatatcatcatgta 20294591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 23439635 - 23439696
Alignment:
Q  217 atcttcaacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 276  Q
    ||||||||||||| |||||||||||  |||||||| |||||||  ||||| |||||||||||    
T  23439635 atcttcaacataatcatcttaaacatcatagcatcattgataacaaattatcaagtaatcac 23439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 23451002 - 23451063
Alignment:
Q  217 atcttcaacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 276  Q
    ||||||||||||| |||||||||||  |||||||| |||||||  ||||| |||||||||||    
T  23451002 atcttcaacataatcatcttaaacatcatagcatcattgataacaaattatcaagtaatcac 23451063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 22335518 - 22335555
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  22335518 catcatcaaatacatttaacaactcatagataacatca 22335555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 22749197 - 22749234
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  22749197 catcatcaagtacatttaaccactcatagataacatca 22749234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 11219590 - 11219622
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  11219590 acatcatcaagtacacttaacaactcatagata 11219622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 11224176 - 11224208
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  11224176 acatcatcaagtacacttaacaactcatagata 11224208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 11226192 - 11226224
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  11226192 acatcatcaagtacacttaacaactcatagata 11226224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 11227998 - 11228030
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  11227998 acatcatcaagtacacttaacaactcatagata 11228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 11229988 - 11230020
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  11229988 acatcatcaagtacacttaacaactcatagata 11230020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Complemental strand, 17919587 - 17919555
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||| ||||||||||||    
T  17919587 gcatctttgataaacaattatcaagtaatcaca 17919555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 52634757 - 52634859
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatca 288  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||    
T  52634757 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatca 52634856  T
Q  289 tca 291  Q
    |||    
T  52634857 tca 52634859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 41389559 - 41389442
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca---------------atagcatctttgataaacaattaccaagtaat 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||    
T  41389559 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaat 41389460  T
Q  274 cacaacgttcgatcatca 291  Q
    ||||||||||||||||||    
T  41389459 cacaacgttcgatcatca 41389442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 39245068 - 39244994
Alignment:
Q  217 atcttcaacataaacatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39245068 atcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 39244994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 39248623 - 39248549
Alignment:
Q  217 atcttcaacataaacatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39248623 atcttaaacataatcatcttaaacaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 39248549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 1009671 - 1009788
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  1009671 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 1009770  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  1009771 cacaacattcgatcatca 1009788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 1926311 - 1926194
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  1926311 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 1926212  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  1926211 cacaacattcgatcatca 1926194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 20925325 - 20925208
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  20925325 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 20925226  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  20925225 cacaacattcgatcatca 20925208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 16376562 - 16376502
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctt 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16376562 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatctt 16376502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 33796491 - 33796541
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796491 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 33796541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 33796577 - 33796637
Alignment:
Q  232 atcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatc 290  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33796577 atcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatc 33796637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 39245214 - 39245172
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39245214 acatcatcaagtacatttaacaactcatagataatatcatgta 39245172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 39248769 - 39248727
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39248769 acatcatcaagtacatttaacaactcatagataatatcatgta 39248727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 41389708 - 41389666
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41389708 acatcatcaagtacatttaacaactcatagataatatcatgta 41389666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 41801321 - 41801280
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41801321 catcatcaagtacatttaacaactcatagataatatcatgta 41801280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 16376491 - 16376445
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||    
T  16376491 gcatctttgataaacaattaccaagtaatcacaacatttgatcatca 16376445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 22132141 - 22132100
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  22132141 catcatcaagtacatttaacaactcatagataacatcatgta 22132100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 22831829 - 22831790
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  22831829 cataattaacatcataaatcttcaacataaacatcttaaa 22831790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 16370961 - 16370998
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16370961 catcatcaagtacatttaacaactcatagataacatca 16370998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 20230181 - 20230140
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  20230181 catcatcaagtacacttaacaactcatagataacatcatgta 20230140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 21406289 - 21406330
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  21406289 catcatcaagtacatttaacaactcctagataacatcatgta 21406330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 11809990 - 11809951
Alignment:
Q  46 tcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  11809990 tcatcaagtacatttaacaactcataggtaacatcatgta 11809951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 46975196 - 46975231
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcaca 277  Q
    ||||||||||||||||||||||| ||||||||||||    
T  46975196 atagcatctttgataaacaattatcaagtaatcaca 46975231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 1009297 - 1009339
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  1009297 acatcatcaagtacacttaacaactcatagatatcatcatgta 1009339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 1926839 - 1926797
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  1926839 acatcatcaagtacacttaacaactcatagatatcatcatgta 1926797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 3705497 - 3705451
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  3705497 gcatctttgataaacaattatcaagtaatcacatcattcaatcatca 3705451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 16376859 - 16376817
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  16376859 acatcatcaagtacacttaacaactcatagatatcatcatgta 16376817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 20925853 - 20925811
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  20925853 acatcatcaagtacacttaacaactcatagatatcatcatgta 20925811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 33796068 - 33796110
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  33796068 acatcatcaagtacacttaacaactcatagatatcatcatgta 33796110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 36819705 - 36819659
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  36819705 gcatctttgataaacaattatcaagtaatcacagcattcaatcatca 36819659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 52634303 - 52634345
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  52634303 acatcatcaagtacacttaacaactcatagatatcatcatgta 52634345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 42865716 - 42865679
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  42865716 taattaacaacataaatcttcaacataaacatcttaaa 42865679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 32649104 - 32649140
Alignment:
Q  45 atcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  32649104 atcatcaagtacatttaacaactcataaataacatca 32649140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 39245111 - 39245079
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatctt 221  Q
    ||||||||||||||||| |||||||||||||||    
T  39245111 cgtactaacaccataattaacatcataaatctt 39245079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 39248666 - 39248634
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatctt 221  Q
    ||||||||||||||||| |||||||||||||||    
T  39248666 cgtactaacaccataattaacatcataaatctt 39248634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 11465 - 11567
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatca 288  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  11465 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacatcatagtatctttgataaacaactaccaagtaatcacaacattcgatca 11564  T
Q  289 tca 291  Q
    |||    
T  11565 tca 11567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 11086 - 11128
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  11086 acatcatcaagtacacttaacaactcatagatatcatcatgta 11128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 18424416 - 18424534
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca---------------atagcatcttt-gataaacaattaccaagtaa 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||| ||||||||||||||||||||    
T  18424416 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatcttttgataaacaattaccaagtaa 18424515  T
Q  273 tcacaacgttcgatcatca 291  Q
    |||||||||||||||||||    
T  18424516 tcacaacgttcgatcatca 18424534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 32057 - 32174
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  32057 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 32156  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  32157 cacaacattcgatcatca 32174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 12705825 - 12705708
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  12705825 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 12705726  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  12705725 cacaacattcgatcatca 12705708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 12713872 - 12713932
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctt 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12713872 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatctt 12713932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 18278391 - 18278451
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctt 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18278391 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatctt 18278451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 18282354 - 18282414
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctt 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18282354 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatctt 18282414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 45171219 - 45171169
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45171219 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 45171169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 12717696 - 12717813
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaa-----------------tagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||                 |||||||||||||||||||||||||||||||    
T  12717696 tactaacaccaaaatcaacatcataaatcttcaacataaacatgttaaacaatatcattttaaacatcctagcatctttgataaacaattaccaagtaat 12717795  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  12717796 cacaacattcgatcatca 12717813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 12722607 - 12722724
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaa-----------------tagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||                 |||||||||||||||||||||||||||||||    
T  12722607 tactaacaccaaaatcaacatcataaatcttcaacataaacatgttaaacaatatcattttaaacatcctagcatctttgataaacaattaccaagtaat 12722706  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  12722707 cacaacattcgatcatca 12722724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 71910 - 71848
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  71910 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 71848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 76019 - 75957
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  76019 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 75957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 71980 - 71930
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  71980 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaaca 71930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 76089 - 76039
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  76089 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaaca 76039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 45171121 - 45171072
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45171121 atagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 45171072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 18424270 - 18424312
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18424270 acatcatcaagtacatttaacaactcatagataatatcatgta 18424312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 12713940 - 12713989
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  12713940 atagcatctttgataaacaattaccaaataatcacaacattcgatcatca 12713989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 18278459 - 18278508
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  18278459 atagcatctttgataaacaattaccaagtaatcacaaaattcgatcatca 18278508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 18282422 - 18282471
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  18282422 atagcatctttgataaacaattaccaagtaatcacaaaattcgatcatca 18282471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 7520258 - 7520217
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  7520258 catcatcaagtacatttaacaactcatagataacatcatgta 7520217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 10607363 - 10607322
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  10607363 catcatcaagtacatttaacaactcatagataacatcatgta 10607322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 11660318 - 11660359
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  11660318 catcatcaagtacatttaacaactcatagataacatcatgta 11660359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 13891666 - 13891707
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  13891666 catcatcaagtacatttaacaactcatagataacatcatgta 13891707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 13892049 - 13892090
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  13892049 catcatcaagtacatttaacaactcatagataacatcatgta 13892090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 20486778 - 20486819
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  20486778 catcatcaagtacatttaacaactcatagataacatcatgta 20486819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 39268356 - 39268315
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  39268356 catcatcaagtacatttaacaactcatagataacatcatgta 39268315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 9752159 - 9752124
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatct 235  Q
    ||||||||||||||||||||||||||||||||||||    
T  9752159 cataatcaacatcataaatcttcaacataaacatct 9752124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 2759785 - 2759838
Alignment:
Q  225 cataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 276  Q
    |||||||||||||||||  || |||||||||||||||||||| |||||||||||    
T  2759785 cataaacatcttaaacatcattgcatctttgataaacaattatcaagtaatcac 2759838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 9752550 - 9752509
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  9752550 catcaccaagtacatttaacaactcatagataacatcatgta 9752509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 14420823 - 14420860
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  14420823 catcatcaagtacatttaacaactcatagataacatca 14420860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 15213084 - 15213125
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||||| ||||||||    
T  15213084 catcatcaagtacatttaacaactcatggataacatcatgta 15213125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 16005040 - 16005077
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16005040 catcatcaagtacatttaacaactcatagataacatca 16005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 16582457 - 16582498
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||| |||| ||||||||    
T  16582457 catcatcaagtacatttaacaactcataaataacatcatgta 16582498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 16582849 - 16582890
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  16582849 cataatcaacatcttaaatcttaaacataaacatcttaaaca 16582890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 18301387 - 18301428
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  18301387 catcatcaagtacatttaacaactcctagataacatcatgta 18301428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 18606374 - 18606411
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18606374 catcatcaagtacatttaacaactcatagataacatca 18606411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 18871333 - 18871370
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18871333 catcatcaagtacatttaacaactcatagataacatca 18871370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 23666496 - 23666463
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataa 76  Q
    ||||||||||||||||||||||||||||||||||    
T  23666496 acatcatcaagtacatttaacaactcatagataa 23666463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 25928414 - 25928373
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  25928414 catcataaagtacatttaacaactcatagataacatcatgta 25928373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 26291193 - 26291234
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  26291193 catcatcaagtacacttaacaactcatagataacatcatgta 26291234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 39721232 - 39721273
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  39721232 catcatcaagtacatttaacaactcatagatatcatcatgta 39721273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 146536 - 146568
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataa 76  Q
    |||||||||||||||||||||||||||||||||    
T  146536 catcatcaagtacatttaacaactcatagataa 146568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 32216992 - 32216941
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatcttaaaca--atagcatctt 251  Q
    |||| |||| ||||||||||||||||||||||||||||||  ||||||||||    
T  32216992 taattaacaacataaatcttcaacataaacatcttaaacatcatagcatctt 32216941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 9702936 - 9702975
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  9702936 taattaacaacataaatcttcaacataaacatcttaaaca 9702975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 13148861 - 13148896
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcaca 277  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13148861 atagcatctttgataaacaattatcaagtaatcaca 13148896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 16185562 - 16185601
Alignment:
Q  46 tcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  16185562 tcatcaagtacatttaacaactcataggtaacatcatgta 16185601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 17138566 - 17138527
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  17138566 cataattaacatcataaatcttcaacataagcatcttaaa 17138527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 31760 - 31802
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  31760 acatcatcaagtacacttaacaactcatagatatcatcatgta 31802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 2833525 - 2833483
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  2833525 acatcatcaagtacacttaacaactcatagatatcatcatgta 2833483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 12317834 - 12317880
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  12317834 gcatctttgataaacaattatcaagtaatcacagcattcaatcatca 12317880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 12706166 - 12706124
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  12706166 acatcatcaagtacacttaacaactcatagatatcatcatgta 12706124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 12713575 - 12713617
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  12713575 acatcatcaagtacacttaacaactcatagatatcatcatgta 12713617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 12722233 - 12722275
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  12722233 acatcatcaagtacacttaacaactcatagatatcatcatgta 12722275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 16908553 - 16908511
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  16908553 acatcatcaagtacacttaacaactcatagatatcatcatgta 16908511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 18281993 - 18282035
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  18281993 acatcatcaagtacacttaacaactcatagatatcatcatgta 18282035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 10897939 - 10897902
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  10897939 catcatcaagtacatttaacgactcatagataacatca 10897902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 14429528 - 14429584
Alignment:
Q  222 caacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 276  Q
    ||||||||||||||||||||  || ||||||||||||| ||| || |||||||||||    
T  14429528 caacataaacatcttaaacatcattgcatctttgataatcaaatatcaagtaatcac 14429584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 15083262 - 15083303
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  15083262 catcatcaagtacacttaacaactcatagatatcatcatgta 15083303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 838176 - 838148
Alignment:
Q  44 catcatcaagtacatttaacaactcatag 72  Q
    |||||||||||||||||||||||||||||    
T  838176 catcatcaagtacatttaacaactcatag 838148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 1203356 - 1203328
Alignment:
Q  44 catcatcaagtacatttaacaactcatag 72  Q
    |||||||||||||||||||||||||||||    
T  1203356 catcatcaagtacatttaacaactcatag 1203328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 9593056 - 9593088
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||| ||||||||||||    
T  9593056 gcatctttgataaacaattatcaagtaatcaca 9593088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 15605668 - 15605624
Alignment:
Q  247 atctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||| |||||||||||| | ||| |||||||    
T  15605668 atctttgataaacaattatcaagtaatcacagcattcaatcatca 15605624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 16110018 - 16109990
Alignment:
Q  44 catcatcaagtacatttaacaactcatag 72  Q
    |||||||||||||||||||||||||||||    
T  16110018 catcatcaagtacatttaacaactcatag 16109990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 18278029 - 18278061
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  18278029 acatcatcaagtacacttaacaactcatagata 18278061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 45171544 - 45171512
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  45171544 acatcatcaagtacacttaacaactcatagata 45171512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 15223727 - 15223845
Alignment:
Q  189 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca---------------atagcatcttt-gataaacaattaccaagtaa 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||| ||||||||||||||||||||    
T  15223727 cgtactaacaccataatcaacatcataaatcttcaacataaacatcttaaacataatcatcttaaacaatagcatcttttgataaacaattaccaagtaa 15223826  T
Q  273 tcacaacgttcgatcatca 291  Q
    |||||||||||||||||||    
T  15223827 tcacaacgttcgatcatca 15223845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 4562443 - 4562326
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  4562443 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcttcttaaacatcatagcatctttgataaacaattaccaagtaat 4562344  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  4562343 cacaacattcgatcatca 4562326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 5757968 - 5757851
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  5757968 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 5757869  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  5757868 cacaacattcgatcatca 5757851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 9555478 - 9555595
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  9555478 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 9555577  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  9555578 cacaacattcgatcatca 9555595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 14758584 - 14758467
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  14758584 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 14758485  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  14758484 cacaacattcgatcatca 14758467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 14955349 - 14955232
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  14955349 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 14955250  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  14955249 cacaacattcgatcatca 14955232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 33741248 - 33741365
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  33741248 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 33741347  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  33741348 cacaacattcgatcatca 33741365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 12486603 - 12486653
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486603 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 12486653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 12486688 - 12486750
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12486688 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 12486750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 25688906 - 25688968
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25688906 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 25688968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 15223581 - 15223623
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15223581 acatcatcaagtacatttaacaactcatagataatatcatgta 15223623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 25688851 - 25688904
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaata 244  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  25688851 tactaacaccctaatcaacatcataaatcttaaacataatcatcttaaacaata 25688904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 13813737 - 13813698
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13813737 taatcaacatcataaatcttcaacataaacatcttaaaca 13813698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 13818256 - 13818210
Alignment:
Q  195 aacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||    
T  13818256 aacatcataattaacatcataaatcttcaacataaacatcttaaaca 13818210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 631790 - 631749
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  631790 catcatcaagtacatttaacaactcatagataacatcatgta 631749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 13813875 - 13813834
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  13813875 catcatcaagtacatttaacaactcatagataacatcatgta 13813834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 13818363 - 13818322
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  13818363 catcatcaagtacatttaacaactcatagataacatcatgta 13818322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 17052488 - 17052447
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  17052488 catcatcaagtacatttaacaactcatagataacatcatgta 17052447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 22634969 - 22634928
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  22634969 catcatcaagtacatttaacaactcatagataacatcatgta 22634928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 23997009 - 23996968
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  23997009 catcatcaagtacatttaacaactcatagataacatcatgta 23996968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 24048427 - 24048386
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  24048427 catcatcaagtacatttaacaactcatagataacatcatgta 24048386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 12422980 - 12423020
Alignment:
Q  45 atcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  12422980 atcatcaagtacatttaacaactcatagataacatcatgta 12423020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 10711861 - 10711902
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  10711861 catcatcaagtacatttaacaactcctagataacatcatgta 10711902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 10925631 - 10925672
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  10925631 catcatcaagtacatttaacaactcctagataacatcatgta 10925672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 15353764 - 15353692
Alignment:
Q  222 caacataaaca-tcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||| |||||||||  || |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  15353764 caacataaacaatcttaaacatcattgcatctttgataaacaattatcaagtaatcacatcattcaatcatca 15353692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 15533255 - 15533292
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  15533255 catcatcaagtacatttaacaactcatagataacatca 15533292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 18211640 - 18211677
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  18211640 catcatcaagtacatttaacaactcatagataacatca 18211677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 22634783 - 22634750
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatct 235  Q
    ||||||||||||||||||||||||||||||||||    
T  22634783 taatcaacatcataaatcttcaacataaacatct 22634750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 27532788 - 27532829
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  27532788 catcatcaagtacatttaacaactcctagataacatcatgta 27532829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 49549125 - 49549088
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  49549125 catcatcaagtacatttaacaactcatagataacatca 49549088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 36036988 - 36037020
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataa 76  Q
    |||||||||||||||||||||||||||||||||    
T  36036988 catcatcaagtacatttaacaactcatagataa 36037020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 13569175 - 13569214
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  13569175 taattaacaacataaatcttcaacataaacatcttaaaca 13569214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 4562817 - 4562775
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  4562817 acatcatcaagtacacttaacaactcatagatatcatcatgta 4562775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 5758499 - 5758457
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  5758499 acatcatcaagtacacttaacaactcatagatatcatcatgta 5758457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 9555104 - 9555146
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  9555104 acatcatcaagtacacttaacaactcatagatatcatcatgta 9555146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 12486306 - 12486348
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  12486306 acatcatcaagtacacttaacaactcatagatatcatcatgta 12486348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 14759035 - 14758993
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  14759035 acatcatcaagtacacttaacaactcatagatatcatcatgta 14758993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 14955803 - 14955761
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  14955803 acatcatcaagtacacttaacaactcatagatatcatcatgta 14955761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 17807089 - 17807131
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  17807089 acatcatcaagtacacttaacaactcatagatatcatcatgta 17807131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 20163942 - 20163900
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  20163942 acatcatcaagtacacttaacaactcatagatatcatcatgta 20163900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 25688477 - 25688519
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  25688477 acatcatcaagtacacttaacaactcatagatatcatcatgta 25688519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 33740871 - 33740913
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  33740871 acatcatcaagtacacttaacaactcatagatatcatcatgta 33740913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 15125546 - 15125505
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||| |||| |||||||||||||||||| |||||||||||    
T  15125546 cataattaacaacataaatcttcaacataaccatcttaaaca 15125505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 20158490 - 20158449
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  20158490 catcatcaagtacacttaacaactcatagatatcatcatgta 20158449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 23996615 - 23996574
Alignment:
Q  194 taacaccataatcaacatcataaatcttcaacataaacatct 235  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||    
T  23996615 taacatcataaccaatatcataaatcttcaacataaacatct 23996574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Complemental strand, 1952156 - 1952124
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||| ||||||||||||    
T  1952156 gcatctttgataaacaattatcaagtaatcaca 1952124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 72
Target Start/End: Original strand, 30145819 - 30145847
Alignment:
Q  44 catcatcaagtacatttaacaactcatag 72  Q
    |||||||||||||||||||||||||||||    
T  30145819 catcatcaagtacatttaacaactcatag 30145847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 5016 - 4899
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  5016 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 4917  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  4916 cacaacattcgatcatca 4899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 6177 - 6060
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  6177 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaatatcatagcatctttgataaacaattaccaagtaat 6078  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  6077 cacaacattcgatcatca 6060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 6364 - 6322
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  6364 acatcatcaagtacacttaacaactcatagatatcatcatgta 6322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 68338 - 68221
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  68338 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 68239  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  68238 cacaacattcgatcatca 68221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 21977790 - 21977673
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  21977790 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 21977691  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  21977690 cacaacattcgatcatca 21977673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 22110999 - 22111116
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  22110999 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 22111098  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  22111099 cacaacattcgatcatca 22111116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 43250759 - 43250876
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  43250759 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 43250858  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  43250859 cacaacattcgatcatca 43250876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 21973699 - 21973639
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaacaatagcatctt 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21973699 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatctt 21973639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 18863823 - 18863773
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18863823 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 18863773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 30941283 - 30941235
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30941283 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaa 30941235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 21829079 - 21829017
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21829079 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 21829017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 30941213 - 30941151
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30941213 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 30941151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 21829149 - 21829099
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21829149 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaaca 21829099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 18863738 - 18863676
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  18863738 catcttaaacatcatagcatctttgacaaacaattaccaagtaatcacaacattcgatcatca 18863676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 21973631 - 21973584
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcacaacgttcgatcat 289  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  21973631 atagcatctttgataaacaattaccaagtaatcacaacattcgatcat 21973584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 21328602 - 21328643
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  21328602 catcatcaagtacatttaacaactcatagataacatcatgta 21328643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 44385876 - 44385835
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  44385876 catcatcaagtacatttaacaactcatagataacatcatgta 44385835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 21386195 - 21386236
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  21386195 catcatcaagtacatttaacaactcctagataacatcatgta 21386236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 23427862 - 23427903
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  23427862 catcattaagtacatttaacaactcatagataacatcatgta 23427903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 23913301 - 23913342
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  23913301 catcatcaagtacatttaacaacttatagataacatcatgta 23913342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 20856894 - 20856826
Alignment:
Q  224 acataaacatcttaa-acaatagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||||||| |  || |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  20856894 acataaacatcttaacatcattgcatctttgataaacaattatcaagtaatcacatcattcaatcatca 20856826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 19259996 - 19259961
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatct 235  Q
    |||||| |||||||||||||||||||||||||||||    
T  19259996 cataattaacatcataaatcttcaacataaacatct 19259961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 20466489 - 20466450
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  20466489 cataattaacatcataaatcttcaacataagcatcttaaa 20466450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 21968033 - 21967994
Alignment:
Q  46 tcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  21968033 tcatcaagtacatttaacaactcataggtaacatcatgta 21967994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 21980873 - 21980834
Alignment:
Q  46 tcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  21980873 tcatcaagtacatttaacaactcataggtaacatcatgta 21980834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 21985856 - 21985817
Alignment:
Q  46 tcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  21985856 tcatcaagtacatttaacaactcataggtaacatcatgta 21985817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 22000819 - 22000780
Alignment:
Q  46 tcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  22000819 tcatcaagtacatttaacaactcataggtaacatcatgta 22000780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 22009237 - 22009198
Alignment:
Q  46 tcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  22009237 tcatcaagtacatttaacaactcataggtaacatcatgta 22009198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Complemental strand, 23847414 - 23847379
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcaca 277  Q
    ||||||||||||||||||||||| ||||||||||||    
T  23847414 atagcatctttgataaacaattatcaagtaatcaca 23847379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 34950124 - 34950163
Alignment:
Q  46 tcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  34950124 tcatcaagtacatttaacaactcataggtaacatcatgta 34950163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 14399136 - 14399094
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  14399136 acatcatcaagtacacttaacaactcatagatatcatcatgta 14399094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 21974227 - 21974185
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  21974227 acatcatcaagtacacttaacaactcatagatatcatcatgta 21974185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 21978337 - 21978295
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  21978337 acatcatcaagtacacttaacaactcatagatatcatcatgta 21978295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 39095381 - 39095324
Alignment:
Q  222 caacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||| |||||||||||||  || | |||||||||||||||||| ||||||||||||    
T  39095381 caacatgaacatcttaaacatcattgtatctttgataaacaattatcaagtaatcaca 39095324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 42560921 - 42560883
Alignment:
Q  47 catcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  42560921 catcacgtacatttaacaactcatagataacatcatgta 42560883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 43250237 - 43250279
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  43250237 acatcatcaagtacacttaacaactcatagatatcatcatgta 43250279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 21409937 - 21409978
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  21409937 catcatcaagtacacttaacaactcatagatatcatcatgta 21409978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 21804429 - 21804470
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  21804429 catcatcaagtacacttaacaactcatagatatcatcatgta 21804470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 44494266 - 44494225
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||| |||||| ||| ||||||||    
T  44494266 catcatcaagtacatttaacaattcataggtaacatcatgta 44494225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 11252123 - 11252087
Alignment:
Q  46 tcatcaagtacatttaacaactcatagataatatcat 82  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  11252123 tcatcaagtacatttaacaactcataggtaacatcat 11252087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Complemental strand, 16231870 - 16231838
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||| ||||||||||||    
T  16231870 gcatctttgataaacaattatcaagtaatcaca 16231838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 18864148 - 18864116
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  18864148 acatcatcaagtacacttaacaactcatagata 18864116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 21169229 - 21169189
Alignment:
Q  201 ataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    ||||| ||||||||| ||||||||||||| |||||||||||    
T  21169229 ataataaacatcatacatcttcaacataagcatcttaaaca 21169189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 21829504 - 21829472
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  21829504 acatcatcaagtacacttaacaactcatagata 21829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 22044594 - 22044626
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||| ||||||||||||    
T  22044594 gcatctttgataaacaattatcaagtaatcaca 22044626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 27942728 - 27942700
Alignment:
Q  44 catcatcaagtacatttaacaactcatag 72  Q
    |||||||||||||||||||||||||||||    
T  27942728 catcatcaagtacatttaacaactcatag 27942700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 30941608 - 30941576
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  30941608 acatcatcaagtacacttaacaactcatagata 30941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 10102966 - 10102849
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  10102966 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 10102867  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  10102866 cacaacattcgatcatca 10102849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 24629637 - 24629520
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  24629637 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 24629538  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  24629537 cacaacattcgatcatca 24629520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 24648303 - 24648420
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  24648303 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 24648402  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  24648403 cacaacattcgatcatca 24648420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 27380510 - 27380393
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  27380510 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 27380411  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  27380410 cacaacattcgatcatca 27380393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 27384556 - 27384439
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  27384556 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 27384457  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  27384456 cacaacattcgatcatca 27384439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 27600780 - 27600897
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  27600780 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 27600879  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  27600880 cacaacattcgatcatca 27600897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 30346173 - 30346056
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca-----------------atagcatctttgataaacaattaccaagtaat 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||||||||    
T  30346173 tactaacaccaaaatcaacatcataaatcttcaacataaacatcttaaacaatatcatcttaaacatcatagcatctttgataaacaattaccaagtaat 30346074  T
Q  274 cacaacgttcgatcatca 291  Q
    |||||| |||||||||||    
T  30346073 cacaacattcgatcatca 30346056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 1282384 - 1282434
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1282384 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 1282434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 41532161 - 41532111
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41532161 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 41532111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 41532076 - 41532014
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41532076 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 41532014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 1282454 - 1282516
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||    
T  1282454 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacatttgatcatca 1282516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 21074550 - 21074510
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgt 84  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  21074550 catcatcaagtacatttaacaactcatagataacatcatgt 21074510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 6481820 - 6481857
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  6481820 catcatcaagtacatttaacaactcatagataacatca 6481857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 6485287 - 6485324
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  6485287 catcatcaagtacatttaacaactcatagataacatca 6485324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 9240710 - 9240747
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9240710 catcatcaagtacatttaacaactcatagataacatca 9240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 9784030 - 9784071
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  9784030 catcatcaagtacattaaacaactcatagataacatcatgta 9784071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 19663600 - 19663563
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19663600 catcatcaagtacatttaacaactcatagataacatca 19663563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 20260293 - 20260330
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  20260293 catcatcaagtacatttaacaactcatagataacatca 20260330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 40622715 - 40622674
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  40622715 cataattaacatcataaatcttcaacataagcatcttaaaca 40622674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 19928902 - 19928866
Alignment:
Q  241 aatagcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||||||| ||||||||||||    
T  19928902 aatagcatctttgataaacaattatcaagtaatcaca 19928866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 24174485 - 24174531
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  24174485 gcatctttgataaacaattatcaagtaatcacatcattcaatcatca 24174531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 24630091 - 24630049
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  24630091 acatcatcaagtacacttaacaactcatagatatcatcatgta 24630049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 24645186 - 24645228
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  24645186 acatcatcaagtacacttaacaactcatagatatcatcatgta 24645228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 24647962 - 24648004
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  24647962 acatcatcaagtacacttaacaactcatagatatcatcatgta 24648004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 27381037 - 27380995
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  27381037 acatcatcaagtacacttaacaactcatagatatcatcatgta 27380995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 27385007 - 27384965
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  27385007 acatcatcaagtacacttaacaactcatagatatcatcatgta 27384965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 27600406 - 27600448
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  27600406 acatcatcaagtacacttaacaactcatagatatcatcatgta 27600448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 30346701 - 30346659
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  30346701 acatcatcaagtacacttaacaactcatagatatcatcatgta 30346659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 37524328 - 37524384
Alignment:
Q  222 caacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcac 276  Q
    ||||||||||||||||||||  || ||||||||||||| ||| || |||||||||||    
T  37524328 caacataaacatcttaaacatcattgcatctttgataatcaaatatcaagtaatcac 37524384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 10103340 - 10103308
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  10103340 acatcatcaagtacacttaacaactcatagata 10103308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 12902650 - 12902618
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  12902650 acatcatcaagtacacttaacaactcatagata 12902618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 24647129 - 24647161
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  24647129 acatcatcaagtacacttaacaactcatagata 24647161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 41532486 - 41532454
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  41532486 acatcatcaagtacacttaacaactcatagata 41532454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 33874 - 33824
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33874 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 33824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 33789 - 33727
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33789 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 33727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 34171 - 34129
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  34171 acatcatcaagtacacttaacaactcatagatatcatcatgta 34129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 15223 - 15161
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15223 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 15161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 15293 - 15243
Alignment:
Q  191 tactaacaccataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15293 tactaacaccataatcaacatcatatatcttcaacataaacatcttaaaca 15243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 15618 - 15586
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  15618 acatcatcaagtacacttaacaactcatagata 15586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 79576 - 79638
Alignment:
Q  231 catcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  79576 catcttaaacatcatagcatctttgataaacaattaccaagtaatcacaacattcgatcatca 79638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 62882 - 62841
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  62882 catcatcaagtacatttaacaactcctagataacatcatgta 62841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 1451 - 1522
Alignment:
Q  222 caacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||||||||||||  || |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  1451 caacataaacatcttaaacatcattgcatctttgataaacaattatcaagtaatcacatcattcaatcatca 1522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 4157 - 4198
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  4157 catcatcaagtacatttaacaactcatagataacatcatgta 4198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 7003 - 6962
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  7003 catcatcaagtacatttaacaactcatagataacatcatgta 6962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 21382 - 21341
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  21382 catcatcaagtacatttaacaactcatagataacatcatgta 21341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 25610 - 25569
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  25610 catcatcaagtacatttaacaactcatagataacatcatgta 25569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 37245 - 37204
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  37245 catcatcaagtacatttaacaactcatagataacatcatgta 37204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 74374 - 74333
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  74374 catcatcaagtacatttaacaactcatagataacatcatgta 74333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 7135 - 7206
Alignment:
Q  222 caacataaacatcttaaacaata--gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    ||||||||||||||||||||  |  |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  7135 caacataaacatcttaaacatcaatgcatctttgataaacaattatcaagtaatcacatcattcaatcatca 7206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000007; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 28509 - 28549
Alignment:
Q  45 atcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  28509 atcatcaagtacatttaacaactcatagataacatcatgta 28549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 33974 - 34014
Alignment:
Q  45 atcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  33974 atcatcaagtacatttaacaactcatagataacatcatgta 34014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 19153 - 19114
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  19153 cataattaacatcataaatcttcaacataagcatcttaaa 19114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 55889 - 55850
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  55889 cataattaacatcataaatcttcaacataagcatcttaaa 55850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000007; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 422978 - 422920
Alignment:
Q  222 caacataaacatcttaaacaata---gcatctttgataaacaattaccaagtaatcaca 277  Q
    ||||||||||||||||||||||    |||||||||||||||||||| ||||||||||||    
T  422978 caacataaacatcttaaacaatcattgcatctttgataaacaattatcaagtaatcaca 422920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 204498 - 204537
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  204498 taattaacaacataaatcttcaacataaacatcttaaaca 204537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 173003 - 173049
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  173003 gcatctttgataaacaattatcaagtaatcacagcattcaatcatca 173049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 178706 - 178738
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||||||||||||||||| ||||||||||||    
T  178706 gcatctttgataaacaattatcaagtaatcaca 178738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 848 - 885
Alignment:
Q  195 aacaccataatcaacatcataaatcttcaacataaaca 232  Q
    |||| |||||||||||||||||||||||||||||||||    
T  848 aacatcataatcaacatcataaatcttcaacataaaca 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 236 - 273
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  236 catcatcaagtacatttaacaactcatagataacatca 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 5278 - 5315
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5278 catcatcaagtacatttaacaactcatagataacatca 5315  T

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Target: scaffold0380 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 4010 - 4051
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  4010 catcatcaagtacatttaacaactcctagataacatcatgta 4051  T

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Target: scaffold0337 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 10864 - 10827
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  10864 catcatcaagtacatttaacaactcatagataacatca 10827  T

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Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 23980 - 23939
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  23980 catcatcaagtacatttaacaactcctagataacatcatgta 23939  T

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Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 32059 - 32100
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  32059 cataattaacaacataaatcttcaacataaacatcttaaaca 32100  T

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Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 37240 - 37199
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  37240 catcatcaagtacatttaacaactcctagataacatcatgta 37199  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 109637 - 109674
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  109637 catcatcaagtacatttaacaactcatagataacatca 109674  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 224185 - 224148
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  224185 catcatcaagtacatttaacaactcatagataacatca 224148  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 414506 - 414454
Alignment:
Q  222 caacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaa 272  Q
    ||||||||||||||||||||  || |||||||||||||||||||| |||||||    
T  414506 caacataaacatcttaaacatcattgcatctttgataaacaattatcaagtaa 414454  T

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Target: scaffold0819 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 1793 - 1828
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatct 235  Q
    |||||| |||||||||||||||||||||||||||||    
T  1793 cataattaacatcataaatcttcaacataaacatct 1828  T

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Target: scaffold0439 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 10752 - 10694
Alignment:
Q  222 caacataaaca-tcttaaaca--atagcatctttgataaacaattaccaagtaatcaca 277  Q
    ||||||||||| |||||||||  || |||||||||||||||||||| ||||||||||||    
T  10752 caacataaacaatcttaaacatcattgcatctttgataaacaattatcaagtaatcaca 10694  T

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Target: scaffold0210 (Bit Score: 32; Significance: 0.000000006; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 22342 - 22303
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  22342 cataattaacatcataaatcttcaacataagcatcttaaa 22303  T

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Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 30234 - 30195
Alignment:
Q  200 cataatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  30234 cataattaacatcataaatcttcaacataagcatcttaaa 30195  T

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Target: scaffold0210; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 22303 - 22271
Alignment:
Q  207 aacatcataaatcttcaacataaacatcttaaa 239  Q
    ||||||||||||||||||||||| |||||||||    
T  22303 aacatcataaatcttcaacataagcatcttaaa 22271  T

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Target: scaffold0210; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 30195 - 30163
Alignment:
Q  207 aacatcataaatcttcaacataaacatcttaaa 239  Q
    ||||||||||||||||||||||| |||||||||    
T  30195 aacatcataaatcttcaacataagcatcttaaa 30163  T

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Target: scaffold0193 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 9127 - 9162
Alignment:
Q  242 atagcatctttgataaacaattaccaagtaatcaca 277  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9127 atagcatctttgataaacaattatcaagtaatcaca 9162  T

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Target: scaffold0081 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 23298 - 23337
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  23298 taattaacaacataaatcttcaacataaacatcttaaaca 23337  T

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Target: scaffold0081; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 38722 - 38761
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatcttaaaca 241  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  38722 taattaacaacataaatcttcaacataaacatcttaaaca 38761  T

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Target: scaffold0081; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 241
Target Start/End: Original strand, 14287 - 14316
Alignment:
Q  212 cataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||||||||||||||||||||||    
T  14287 cataaatcttcaacataaacatcttaaaca 14316  T

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Target: scaffold0486 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 8612 - 8654
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  8612 acatcatcaagtacacttaacaactcatagatatcatcatgta 8654  T

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Target: scaffold0120 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 20408 - 20362
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  20408 gcatctttgataaacaattatcaagtaatcacagcattcaatcatca 20362  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 18897 - 18943
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||| ||| |||||||||||||| ||| |||||||    
T  18897 gcatctttgataaacagttatcaagtaatcacaacattcaatcatca 18943  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 60369 - 60327
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  60369 acatcatcaagtacacttaacaactcatagatatcatcatgta 60327  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 15667 - 15610
Alignment:
Q  222 caacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||| |||||||||||||  || | |||||||||||||||||| ||||||||||||    
T  15667 caacatgaacatcttaaacatcattgtatctttgataaacaattatcaagtaatcaca 15610  T

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Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 20189 - 20132
Alignment:
Q  222 caacataaacatcttaaaca--atagcatctttgataaacaattaccaagtaatcaca 277  Q
    |||||| |||||||||||||  || | |||||||||||||||||| ||||||||||||    
T  20189 caacatgaacatcttaaacatcattgtatctttgataaacaattatcaagtaatcaca 20132  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 195357 - 195311
Alignment:
Q  245 gcatctttgataaacaattaccaagtaatcacaacgttcgatcatca 291  Q
    |||||||||||||||||||| |||||||||||| | ||| |||||||    
T  195357 gcatctttgataaacaattatcaagtaatcacatcattcaatcatca 195311  T

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Target: scaffold0574 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 241
Target Start/End: Complemental strand, 8308 - 8279
Alignment:
Q  212 cataaatcttcaacataaacatcttaaaca 241  Q
    ||||||||||||||||||||||||||||||    
T  8308 cataaatcttcaacataaacatcttaaaca 8279  T

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Target: scaffold0327 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 18859 - 18896
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatca 81  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  18859 catcatcaagtacatttaacaacttatagataacatca 18896  T

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Target: scaffold0142 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 8782 - 8741
Alignment:
Q  44 catcatcaagtacatttaacaactcatagataatatcatgta 85  Q
    |||||||| |||||||||||||||| ||||||| ||||||||    
T  8782 catcatcatgtacatttaacaactcgtagataacatcatgta 8741  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 69409 - 69446
Alignment:
Q  202 taatcaacatcataaatcttcaacataaacatcttaaa 239  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  69409 taattaacaacataaatcttcaacataaacatcttaaa 69446  T

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Target: scaffold1852 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 864 - 832
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  864 acatcatcaagtacacttaacaactcatagata 832  T

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Target: scaffold0544 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 3558 - 3522
Alignment:
Q  45 atcatcaagtacatttaacaactcatagataatatca 81  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  3558 atcatcaagtacatttaacaactcataaataacatca 3522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 14879 - 14911
Alignment:
Q  43 acatcatcaagtacatttaacaactcatagata 75  Q
    ||||||||||||||| |||||||||||||||||    
T  14879 acatcatcaagtacacttaacaactcatagata 14911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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