View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0678_low_12 (Length: 423)
Name: NF0678_low_12
Description: NF0678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0678_low_12 |
 |  |
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Alignment Details
Target: chr1 (Bit Score: 384; Significance: 0; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 30 - 413
Target Start/End: Complemental strand, 3300857 - 3300474
Alignment:
Q |
30 |
gaacagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccag |
129 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3300857 |
gaacagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccag |
3300758 |
T |
 |
Q |
130 |
acaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggc |
229 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3300757 |
acaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggc |
3300658 |
T |
 |
Q |
230 |
tcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtg |
329 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3300657 |
tcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtg |
3300558 |
T |
 |
Q |
330 |
gggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtg |
413 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3300557 |
gggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtg |
3300474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 30 - 409
Target Start/End: Complemental strand, 43045123 - 43044744
Alignment:
Q |
30 |
gaacagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccag |
129 |
Q |
|
|
|||||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
43045123 |
gaacagatggatgctactacacccaagtactccaagggtagatatgatgaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccag |
43045024 |
T |
 |
Q |
130 |
acaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggc |
229 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
T |
43045023 |
acaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaaccttgactggtacaagggtccaacccttcttgaggc |
43044924 |
T |
 |
Q |
230 |
tcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtg |
329 |
Q |
|
|
|||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
43044923 |
ccttgaccaaatcaatgagcctaagaggccttcagacaagcccctccgactaccacttcaggatgtctacaagattggaggaattggaactgtgcctgtg |
43044824 |
T |
 |
Q |
330 |
gggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtc |
409 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
43044823 |
gggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtcaagtc |
43044744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 30 - 409
Target Start/End: Original strand, 43066868 - 43067247
Alignment:
Q |
30 |
gaacagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccag |
129 |
Q |
|
|
|||||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
43066868 |
gaacagatggatgctactacacccaagtactccaagggtagatatgatgaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccag |
43066967 |
T |
 |
Q |
130 |
acaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggc |
229 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
T |
43066968 |
acaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaaccttgactggtacaagggtccaacccttcttgaggc |
43067067 |
T |
 |
Q |
230 |
tcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtg |
329 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
T |
43067068 |
ccttgaccaaatcaacgagcctaagaggccttcagacaagcccctccgactaccacttcaagatgtctacaagattggaggaattggaactgtgcctgtg |
43067167 |
T |
 |
Q |
330 |
gggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtc |
409 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
43067168 |
gggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtcaagtc |
43067247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 30 - 413
Target Start/End: Complemental strand, 43083967 - 43083584
Alignment:
Q |
30 |
gaacagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccag |
129 |
Q |
|
|
|||||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
43083967 |
gaacagatggatgctactacacccaagtactccaagggtagatatgatgaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccag |
43083868 |
T |
 |
Q |
130 |
acaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggc |
229 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
T |
43083867 |
acaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaaccttgactggtacaagggtccaacccttcttgaggc |
43083768 |
T |
 |
Q |
230 |
tcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtg |
329 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
T |
43083767 |
acttgaccaaatcaacgagcctaagaggccttcagacaagcccctccgactaccacttcaagatgtctacaagattggaggaattggaactgtgcctgtg |
43083668 |
T |
 |
Q |
330 |
gggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtg |
413 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
43083667 |
gggcgtgtcgagactggtgtcataaaacctggaatggttatcacttttgcccctactggactgacaactgaagtcaagtctgtg |
43083584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 81 - 413
Target Start/End: Original strand, 43076774 - 43077098
Alignment:
Q |
81 |
attgtgaaggaagtttcatcctatttgaagaaggttggctataacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcg |
180 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
43076774 |
attgtggaggaagtttcatcctatttgaagaaggttggctataacccagaaaacattccatttgttcccatctctggttttgagggagataacatgatcg |
43076873 |
T |
 |
Q |
181 |
agcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtct |
280 |
Q |
|
|
||||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||| || |
|
|
T |
43076874 |
agcgctctacaaaccttaactggtacaagggtccaacccttcttggggcccttgaccaaatcaacgagcctaagaggccttcagacaagcacctccgact |
43076973 |
T |
 |
Q |
281 |
accgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcc |
380 |
Q |
|
|
|| ||||||||||| || |||||||||| ||||| ||||||| ||||| |||||||||||| | |||||||||||||| || ||||||||| |
|
|
T |
43076974 |
ac--------aatgtctacaagtttagaggaattggaactgtacctgtggcacgtgttgagactggtgtcttgaaacctggaatggtggtgacttttgcc |
43077065 |
T |
 |
Q |
381 |
cctactggactgacaactgaagtgaagtctgtg |
413 |
Q |
|
|
||||||||||||||| || |||| | ||||||| |
|
|
T |
43077066 |
cctactggactgacagctaaagtcacgtctgtg |
43077098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 32 - 398
Target Start/End: Original strand, 38138019 - 38138385
Alignment:
Q |
32 |
acagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagac |
131 |
Q |
|
|
||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||| ||||| ||| ||||| | ||||||||||||| ||| |
|
|
T |
38138019 |
acagatggatgccactacacccaaatactccaaggataggtatgaagaaattgtgaaggaattttcaccctttttgattgatgttggctataacctagat |
38138118 |
T |
 |
Q |
132 |
aaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctc |
231 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| || || |||||||| || ||||||||||| |||||||| ||||||||||| |||| |
|
|
T |
38138119 |
gaaattccatttgttcccatctctggttttgagggagataacatcattgaacgctctactaaccttgactggtataagggtcccacccttcttgaagctc |
38138218 |
T |
 |
Q |
232 |
ttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggg |
331 |
Q |
|
|
||||||||||||| ||||||||||||| || ||||||||| ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
38138219 |
ttgaccaaatcaaggagcctaagaggctattagacaagcctctccgattaccacttcaggatgtctacaagattggaggaattggaactgtgcctgtggg |
38138318 |
T |
 |
Q |
332 |
gcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaact |
398 |
Q |
|
|
|| || |||| |||||| | ||||| ||||||| || ||||||||||| ||||| |||| |||| |
|
|
T |
38138319 |
acgggttgagagcggtgtcttgaaaccaggaatggcggtgacttttgccccaactgggctgaaaact |
38138385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 32 - 413
Target Start/End: Original strand, 45983861 - 45984236
Alignment:
Q |
32 |
acagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagac |
131 |
Q |
|
|
|||||||||||||||||||||||| ||||| | || |||||||| ||||||||||| | |||||| | ||| |||||| |||||||||||||| | |
|
|
T |
45983861 |
acagatggatgccactacacctaaatactctagggataggtatgtagaaattgtgaggcaagttttaccctgtttgaataaggttggctataaactt--- |
45983957 |
T |
 |
Q |
132 |
aaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctc |
231 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||| ||||||||||| ||| |
|
|
T |
45983958 |
---attccaattgttcccatctctggttttgagggagataacttgattgagcgctctactaatcttgattggtacaagggtccaacccttcttgaagcta |
45984054 |
T |
 |
Q |
232 |
ttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggg |
331 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
T |
45984055 |
ttgaccaaatcaacgagcctatgaggccatcagacaagcctctcagaataccacttcaggatgtctacaagattggaggaatcggaactgtgcctgtggg |
45984154 |
T |
 |
Q |
332 |
gcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtg |
413 |
Q |
|
|
||||| ||||||||| | | || ||||||||||| | ||||||||| | ||||| ||| | ||||||||||||||||| |
|
|
T |
45984155 |
acgtgttgagactggttccttgaaccctggaatggtgctgacttttgccgcaactgggctgcaagctgaagtgaagtctgtg |
45984236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 32 - 382
Target Start/End: Complemental strand, 50912503 - 50912150
Alignment:
Q |
32 |
acagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctat---aaccca |
128 |
Q |
|
|
|||||||||||| ||||| || || ||||| ||||||||||||||||||||||| ||| ||||| ||| | | |||| |||||||||| || | | |
|
|
T |
50912503 |
acagatggatgctactactcccaaatactccaagggtaggtatgaagaaattgttaagatcctttcaccctttctaaagagggttggctatgataatcta |
50912404 |
T |
 |
Q |
129 |
gacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgagg |
228 |
Q |
|
|
|| ||||||| ||| ||||||||||||||||||||||||||||||| || ||||||||||| || |||||||||||||| ||||| |||||| |||| | |
|
|
T |
50912403 |
gatgaaattccgtttattcccatctctggttttgagggagataacatcattgagcgctctactaaccttgactggtacaaaggtcccacccttattgaag |
50912304 |
T |
 |
Q |
229 |
ctcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgt |
328 |
Q |
|
|
||||||| |||||||| |||||||| || |||||| ||| ||| ||||| |||| ||||||| ||||||||||||||||| |||||| | ||| ||||| |
|
|
T |
50912303 |
ctcttgatcaaatcaaggagcctaatagaccatcacacatgcctctccgattaccacttcaggttgtctacaagattggagaaattggaattgtacctgt |
50912204 |
T |
 |
Q |
329 |
ggggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccc |
382 |
Q |
|
|
||| ||| | ||||| |||||| | |||| ||||||||| || ||||||||||| |
|
|
T |
50912203 |
gggacgtattgagaccggtgtcttgaaacgtggaatggtggtgacttttgcccc |
50912150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 34 - 413
Target Start/End: Original strand, 7891113 - 7891492
Alignment:
Q |
34 |
agatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagacaa |
133 |
Q |
|
|
||||||||||||||||||| || ||||| |||| |||||||||| ||||||||| || ||||| ||| ||||| ||||||||||||||| || || |
|
|
T |
7891113 |
agatggatgccactacacccaaatactccaaggataggtatgaacaaattgtgagtcaaatttcaccctttttgagtgaggttggctataacctaggtaa |
7891212 |
T |
 |
Q |
134 |
aattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctctt |
233 |
Q |
|
|
|||||| ||| | || |||||||||| |||||||||||||| || ||||||||| | || ||||| ||||||| |||||| ||||||||||| |||||| |
|
|
T |
7891213 |
aattccttttatccctatctctggttacgagggagataacatcattgagcgctcttctaaccttgattggtacacgggtcccacccttcttgaagctctt |
7891312 |
T |
 |
Q |
234 |
gaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggggc |
333 |
Q |
|
|
|||||| ||| |||||||||| | | || ||| ||||| |||| ||||| |||||||||||||||||||||||||| | |||||||||||| | |
|
|
T |
7891313 |
gaccaattcagaaggcctaagaggttaatattcaggcctctccgattaccacttcaagatgtctacaagattggaggaattggaattgtgcctgtgggac |
7891412 |
T |
 |
Q |
334 |
gtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtg |
413 |
Q |
|
|
| || ||| ||||| || | |||||||||||||| | ||||||||||| ||||| || ||||||||||||||||||| |
|
|
T |
7891413 |
gcgttgagtctggtatcttgaaacctggaatggtgctgacttttgccccaactgggctccaaactgaagtgaagtctgtg |
7891492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 32 - 413
Target Start/End: Original strand, 40034852 - 40035233
Alignment:
Q |
32 |
acagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagac |
131 |
Q |
|
|
|||||||||||| |||||||| || ||||| |||||||||| ||||||| |||||| | | | || || ||||| |||||||||||||||| | |
|
|
T |
40034852 |
acagatggatgcaactacacccaaatactctaagggtaggtttgaagaacttgtgacgaatttctccccccttttgatcaaggttggctataacctatct |
40034951 |
T |
 |
Q |
132 |
aaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctc |
231 |
Q |
|
|
| ||||||||| ||||||| |||||||||| ||||| ||||| || ||||||||||| || ||||| |||||||| ||||| |||||| |||| ||| |
|
|
T |
40034952 |
gacattccatttattcccatatctggttttgttggagaaaacatcattgagcgctctactaaccttgattggtacaaaggtcccaccctttttgaagcta |
40035051 |
T |
 |
Q |
232 |
ttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggg |
331 |
Q |
|
|
| ||||||||||| | || |||||||||||||| ||||| ||||| |||| | ||| ||| |||| ||||||||||||||| |||||||| || |
|
|
T |
40035052 |
tcgaccaaatcaaagtaccgaagaggccatcagataagcctctccgattaccaatccagtctgtttacatgattggaggaattggagtcgtgcctgttgg |
40035151 |
T |
 |
Q |
332 |
gcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtg |
413 |
Q |
|
|
||||| |||||||||| | ||||| ||||||| ||| ||||||||||| ||||| || ||||||||||| ||||||| |
|
|
T |
40035152 |
tcgtgttatgactggtgtcttgaaaccaggaatggctgtgacttttgccccaactggggtgcaaactgaagtgaggtctgtg |
40035233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 7888848 - 7888938
Alignment:
Q |
34 |
agatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataa |
124 |
Q |
|
|
||||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||||||| ||| ||||| ||||||||||||| |
|
|
T |
7888848 |
agatggatgccactacacccatatactcctaggacaggtatgaagaaattgtgaatcaagtttcaccctttttgagagaggttggctataa |
7888938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 30 - 413
Target Start/End: Complemental strand, 4231588 - 4231205
Alignment:
Q |
30 |
gaacagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccag |
129 |
Q |
|
|
||||||||||| |||||||| || |||||||| ||| | |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
T |
4231588 |
gaacagatggacgccactactcccaagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctataacccag |
4231489 |
T |
 |
Q |
130 |
acaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggc |
229 |
Q |
|
|
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
T |
4231488 |
ataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggc |
4231389 |
T |
 |
Q |
230 |
tcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtg |
329 |
Q |
|
|
|||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
T |
4231388 |
tcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtg |
4231289 |
T |
 |
Q |
330 |
gggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtg |
413 |
Q |
|
|
|| ||||| ||||||||| ||| |||||||||||||| || |||||||| || ||||||||| ||||||||| ||||||||| |
|
|
T |
4231288 |
ggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtg |
4231205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 169; Significance: 2e-90; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 34 - 414
Target Start/End: Complemental strand, 4619808 - 4619428
Alignment:
Q |
34 |
agatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagacaa |
133 |
Q |
|
|
|||||||||||||| |||| || ||||| ||| ||||||||||||| ||||||| | ||||| || |||| ||| | ||||||||||||| | || |
|
|
T |
4619808 |
agatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggctataaccctaaaaa |
4619709 |
T |
 |
Q |
134 |
aattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctctt |
233 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||| | ||||||||||||||| ||||||| ||||||||||| |||||| |
|
|
T |
4619708 |
aattacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctctt |
4619609 |
T |
 |
Q |
234 |
gaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggggc |
333 |
Q |
|
|
|||||||||||||||||||| ||||||||| ||||||| ||||| |||| |||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
4619608 |
gaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggat |
4619509 |
T |
 |
Q |
334 |
gtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtgc |
414 |
Q |
|
|
|||| ||||| |||||| | |||||||||||| | || ||||||||||| | ||| ||| | ||||||| |||||||||| |
|
|
T |
4619508 |
gtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgccccgattgggctgcaagctgaagtaaagtctgtgc |
4619428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 34 - 413
Target Start/End: Complemental strand, 1846608 - 1846229
Alignment:
Q |
34 |
agatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagacaa |
133 |
Q |
|
|
||||||||||||||||||| || ||||| |||| |||||||||| ||||||||| || ||||| ||| ||||| |||||||||||||||||| || |
|
|
T |
1846608 |
agatggatgccactacacccaaatactccaaggataggtatgaacaaattgtgagtcaaatttcaccctttttgagcgaggttggctataacccaggtaa |
1846509 |
T |
 |
Q |
134 |
aattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctctt |
233 |
Q |
|
|
|||||| ||| | || |||||||||| |||||||||||||| || |||| |||| | || ||||||||||||| |||||| ||||||||||| |||||| |
|
|
T |
1846508 |
aattccttttatccctatctctggttacgagggagataacatcattgagcactcttctaaccttgactggtacacgggtcccacccttcttgaagctctt |
1846409 |
T |
 |
Q |
234 |
gaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggggc |
333 |
Q |
|
|
|||||||||| |||||||||| | | || ||| ||||| |||| ||||| |||||||||||||||||||||||||| | |||||||||||| | |
|
|
T |
1846408 |
gaccaaatcagaaggcctaagaggttaatattcaggcctctccgattaccacttcaagatgtctacaagattggaggaattggaattgtgcctgtgggac |
1846309 |
T |
 |
Q |
334 |
gtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtg |
413 |
Q |
|
|
| || ||| ||||| || | |||||||||||||| | ||||||||||| ||||| || ||||||||||||||||||| |
|
|
T |
1846308 |
gcgttgagtctggtatcttgaaacctggaatggtgctgacttttgccccaactgggctccaaactgaagtgaagtctgtg |
1846229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 111 - 347
Target Start/End: Original strand, 4787648 - 4787884
Alignment:
Q |
111 |
aaggttggctataacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagg |
210 |
Q |
|
|
|||||||||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||| |||| || ||||| || ||| |||||||||| | || |
|
|
T |
4787648 |
aaggttggctataacccaaatgaaattccatttgttcccatctctagttttgatggagataacttgattgaccgctccactaattttgactggtaaatgg |
4787747 |
T |
 |
Q |
211 |
gtcctacccttcttgaggctcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggagg |
310 |
Q |
|
|
|||| ||||||||||| ||| ||||| ||| || |||||||||||||||||| | ||| ||||| ||||| || |||| |||||||||||||||| |
|
|
T |
4787748 |
gtccgacccttcttgaagctattgacagaatgaaagagcctaagaggccatcaaatttgcctctccgactaccaattatggatttctacaagattggagg |
4787847 |
T |
 |
Q |
311 |
aattgggactgtgcctgtggggcgtgtcgagactggt |
347 |
Q |
|
|
||| || |||| ||||||| ||||||||||||||| |
|
|
T |
4787848 |
aatcggagttgtgtctgtgggacgtgtcgagactggt |
4787884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 32 - 347
Target Start/End: Complemental strand, 4297603 - 4297288
Alignment:
Q |
32 |
acagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagac |
131 |
Q |
|
|
||||||||||||||||||||| || ||||| | || |||||||| | |||| || |||||| | ||||||||| |||||||||||||| ||| | |
|
|
T |
4297603 |
acagatggatgccactacacccaaatactccatggataggtatgtaaaaatatcagagcaagttttaacctatttgatcaaggttggctataagccatat |
4297504 |
T |
 |
Q |
132 |
aaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctc |
231 |
Q |
|
|
||||||||||| ||||||||||| ||||||| ||||||||| |||| || ||||| || ||| ||||||||||||||||||| ||||||||||| ||| |
|
|
T |
4297503 |
gaaattccatttattcccatctctagttttgacggagataacttgattgaccgctccactaattttgactggtacaagggtcccacccttcttgaagcta |
4297404 |
T |
 |
Q |
232 |
ttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggg |
331 |
Q |
|
|
||||| ||| || | |||| |||||||||| | || ||||| ||| | |||||||| |||| || ||||||||||| | |||||||||||| |
|
|
T |
4297403 |
ttgacataatgaaagggcctgcgaggccatcaaattttcctctccgactatcaattcaggatttctagaatattggaggaatcagagatgtgcctgtggg |
4297304 |
T |
 |
Q |
332 |
gcgtgtcgagactggt |
347 |
Q |
|
|
||||||||||||||| |
|
|
T |
4297303 |
ccgtgtcgagactggt |
4297288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 146; Significance: 9e-77; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 33 - 414
Target Start/End: Complemental strand, 34690966 - 34690585
Alignment:
Q |
33 |
cagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagaca |
132 |
Q |
|
|
||||||||||||| |||||| || ||||| |||| |||||||||| ||||||||||| | ||||| || ||||| || | |||| |||||| |||| | |
|
|
T |
34690966 |
cagatggatgccattacacccaaatactccaaggataggtatgaactaattgtgaagggaatttcacccgctttgatgaggattggttataacacagata |
34690867 |
T |
 |
Q |
133 |
aaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctct |
232 |
Q |
|
|
||||||||||||||||||||||||||| | ||||||||||||| || |||||||| || || |||||||||||| | ||||||||||||||||| ||||| |
|
|
T |
34690866 |
aaattccatttgttcccatctctggttataagggagataacatcattgagcgctcgactaaccttgactggtacgaaggtcctacccttcttgaagctct |
34690767 |
T |
 |
Q |
233 |
tgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtgggg |
332 |
Q |
|
|
|||||||||| |||||||||||||||| |||| |||||| | | ||||| ||||| ||||||||||||||||||| |||| ||||| ||||| || |
|
|
T |
34690766 |
tgaccaaatcgacgagcctaagaggccttcaggcaagcctttgagactaccacttcaacatgtctacaagattggaggtgttggaactgtacctgtcgga |
34690667 |
T |
 |
Q |
333 |
cgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtgc |
414 |
Q |
|
|
||||| ||||||||||| | |||||||||||||| | ||||||||||| ||||| ||| | ||| ||| |||||||||| |
|
|
T |
34690666 |
cgtgttgagactggtgtgttgaaacctggaatggtgctgacttttgccccaactgggctgcaatctggagttaagtctgtgc |
34690585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 33 - 414
Target Start/End: Complemental strand, 34713378 - 34712997
Alignment:
Q |
33 |
cagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagaca |
132 |
Q |
|
|
||||||||||||| |||||| || ||||| |||| |||||||||| ||||||||||| | ||||| || ||||| || | |||| |||||| |||| | |
|
|
T |
34713378 |
cagatggatgccattacacccaaatactccaaggataggtatgaactaattgtgaagggaatttcacccgctttgatgaggattggttataacacagata |
34713279 |
T |
 |
Q |
133 |
aaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctct |
232 |
Q |
|
|
||||||||||||||||||||||||||| | ||||||||||||| || |||||||| || || |||||||||||| | ||||||||||||||||| ||||| |
|
|
T |
34713278 |
aaattccatttgttcccatctctggttataagggagataacatcattgagcgctcgactaaccttgactggtacgaaggtcctacccttcttgaagctct |
34713179 |
T |
 |
Q |
233 |
tgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtgggg |
332 |
Q |
|
|
|||||||||| |||||||||||||||| |||| |||||| | | ||||| ||||| ||||||||||||||||||| |||| ||||| ||||| || |
|
|
T |
34713178 |
tgaccaaatcgacgagcctaagaggccttcaggcaagcctttgagactaccacttcaacatgtctacaagattggaggtgttggaactgtacctgtcgga |
34713079 |
T |
 |
Q |
333 |
cgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtgc |
414 |
Q |
|
|
||||| ||||||||||| | |||||||||||||| | ||||||||||| ||||| ||| | ||| ||| |||||||||| |
|
|
T |
34713078 |
cgtgttgagactggtgtgttgaaacctggaatggtgctgacttttgccccaactgggctgcaatctggagttaagtctgtgc |
34712997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 32 - 386
Target Start/End: Complemental strand, 16232308 - 16231954
Alignment:
Q |
32 |
acagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagac |
131 |
Q |
|
|
||||||| ||||||||||||| || ||||| |||| || ||||||| ||||||||||| ||||||| || ||||| || | |||| |||||| | || |
|
|
T |
16232308 |
acagatgaatgccactacaccgaaatactccaaggacagatatgaagtaattgtgaagggagtttcacccgctttgacgaggattggttataacgctgat |
16232209 |
T |
 |
Q |
132 |
aaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctc |
231 |
Q |
|
|
| ||||||||||||||||||||||||||| || |||||||||| | ||||||||||| || ||||||||||| | || ||||||||| |||| ||| |
|
|
T |
16232208 |
gatattccatttgttcccatctctggttttaagtgagataacatcgttgagcgctctactaaccttgactggtatgatgggcctacccttgttgaagcta |
16232109 |
T |
 |
Q |
232 |
ttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggg |
331 |
Q |
|
|
|||||||||||| ||||||||||||||| || |||||| || || || || |||||| ||||||||||||||||||| ||||| ||||| |||||||| |
|
|
T |
16232108 |
ttgaccaaatcagcgagcctaagaggcccgaaggcaagcctctgcgacttccccttcagcatgtctacaagattggaggtattggaactgtacctgtggg |
16232009 |
T |
 |
Q |
332 |
gcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctact |
386 |
Q |
|
|
||||| |||||||| || |||| || |||||||| | ||||||||||||||| |
|
|
T |
16232008 |
acgtgttgagactggggtattaaagcccggaatggtactgacttttgcccctact |
16231954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 33860879 - 33860757
Alignment:
Q |
115 |
ttggctataacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcc |
214 |
Q |
|
|
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| |
|
|
T |
33860879 |
ttggctataacctagacaaagttccatttgttcccatctctggttttgagggagataacttgattgagcgctctactaatcttgactggtacaagggtcc |
33860780 |
T |
 |
Q |
215 |
tacccttcttgaggctcttgacc |
237 |
Q |
|
|
||||||||||| |||||||||| |
|
|
T |
33860779 |
cacccttcttgaagctcttgacc |
33860757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 136; Significance: 8e-71; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 33 - 412
Target Start/End: Original strand, 7519882 - 7520261
Alignment:
Q |
33 |
cagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagaca |
132 |
Q |
|
|
||||||||||| || || || |||||||| |||| |||||| || ||||| |||||||||||||||||||| |||||||||||||| || |||||||||| |
|
|
T |
7519882 |
cagatggatgctaccacccccaagtactcaaaggctaggtacgatgaaatcgtgaaggaagtttcatcctacttgaagaaggttggttacaacccagaca |
7519981 |
T |
 |
Q |
133 |
aaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctct |
232 |
Q |
|
|
|||| ||||||||||| |||||||||||||| || || |||||||| ||| | ||||| || ||||||||||||||||| || || || ||||||||||| |
|
|
T |
7519982 |
aaatcccatttgttccaatctctggttttgaaggtgacaacatgattgagaggtctaccaaccttgactggtacaagggaccaactctccttgaggctct |
7520081 |
T |
 |
Q |
233 |
tgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtgggg |
332 |
Q |
|
|
|||||| ||||||||||| ||||| || |||||||||||||| | || || | || ||||| ||||||||||| || ||||| |||||||| || || |
|
|
T |
7520082 |
tgaccagatcaacgagcccaagagacccacagacaagcccctcaggcttccattgcaagatgtttacaagattggtggtattggaactgtgccagttgga |
7520181 |
T |
 |
Q |
333 |
cgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgt |
412 |
Q |
|
|
||||| ||||| ||| | | || || || |||||||| ||||||| || ||||| ||||||||||||| |||||||| |
|
|
T |
7520182 |
cgtgttgagaccggtattgtgaagcccggtatggttgtgacttttggacccactggtttgacaactgaagttaagtctgt |
7520261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 33 - 412
Target Start/End: Original strand, 7529419 - 7529798
Alignment:
Q |
33 |
cagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagaca |
132 |
Q |
|
|
||||||||||| || || || |||||||| |||| |||||| || ||||| |||||||||||||||||||| |||||||||||||| || ||||| |||| |
|
|
T |
7529419 |
cagatggatgctaccacccccaagtactcaaaggctaggtacgatgaaatcgtgaaggaagtttcatcctacttgaagaaggttggttacaaccctgaca |
7529518 |
T |
 |
Q |
133 |
aaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctct |
232 |
Q |
|
|
|||| ||||||||||||||||| || ||||| || || |||||||| ||| | || || || ||||||||||||||||| || || || ||||||||||| |
|
|
T |
7529519 |
aaatcccatttgttcccatctccggatttgaaggtgacaacatgattgagaggtccaccaaccttgactggtacaagggaccaactctccttgaggctct |
7529618 |
T |
 |
Q |
233 |
tgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtgggg |
332 |
Q |
|
|
|||||| ||||||||||| ||||| || |||||||||||||| | || || | || ||||| ||||||||||| || ||||| |||||||| || || |
|
|
T |
7529619 |
tgaccagatcaacgagcccaagagacccacagacaagcccctcaggcttccattgcaagatgtttacaagattggtggtattggaactgtgccagtcgga |
7529718 |
T |
 |
Q |
333 |
cgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgt |
412 |
Q |
|
|
||||| ||||| ||| | | || || || |||||||| ||||||| || ||||| || ||||||||||| |||||||| |
|
|
T |
7529719 |
cgtgttgagaccggtattgtgaagcccggtatggttgtgacttttggacccactggtctaacaactgaagttaagtctgt |
7529798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 67 - 382
Target Start/End: Complemental strand, 16349233 - 16348918
Alignment:
Q |
67 |
gtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagacaaaattccatttgttcccatctctggttttgaggg |
166 |
Q |
|
|
|||||| |||||||||||||| || ||||||| ||||| ||| ||||||||||| | |||| || || |||||||||||||||||||||||||||| |
|
|
T |
16349233 |
gtaggtttgaagaaattgtgagtcaactttcatcaattttgatgaacgttggctataaacaagacgaagttacatttgttcccatctctggttttgaggg |
16349134 |
T |
 |
Q |
167 |
agataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctcttgaccaaatcaacgagcctaagaggccatcagac |
266 |
Q |
|
|
||||||| || | |||| ||||||||| ||||| ||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||| |
|
|
T |
16349133 |
agataacttggttgagccctctacaaaacttgatgggtacaagggtcccacccttcttgaagctcttgaccgaatcaacgagcctaagaggctatcagac |
16349034 |
T |
 |
Q |
267 |
aagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggggcgtgtcgagactggtgtcataaaacctggaatgg |
366 |
Q |
|
|
||||| ||||| |||| ||||||| |||||||||||||||||||||||| || || ||| || ||||| |||||||||| | ||||||||||||| |
|
|
T |
16349033 |
aagcctctccgattaccacttcagggtgtctacaagattggaggaattggagctttggctgcaggatgtgtcaggactggtgtcttgaaacctggaatgg |
16348934 |
T |
 |
Q |
367 |
ttgtcacttttgcccc |
382 |
Q |
|
|
| || |||||| |||| |
|
|
T |
16348933 |
tggtgactttttcccc |
16348918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 104 - 252
Target Start/End: Original strand, 39242500 - 39242650
Alignment:
Q |
104 |
tttgaagaaggttggctataacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactgg |
203 |
Q |
|
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||| | ||||||||| |||| ||||||||||| ||| |||||||| |
|
|
T |
39242500 |
tttgaagaaggttggctataacccagacaaaactcgatttgttcccatctctggttttaacggagataacttgattgagcgctctactaatattgactgg |
39242599 |
T |
 |
Q |
204 |
tacaagggtcctacccttcttga--ggctcttgaccaaatcaacgagccta |
252 |
Q |
|
|
||||| |||| ||||||||||| |||||||||| | |||||||||||| |
|
|
T |
39242600 |
tacaacagtcccacccttcttgaagcgctcttgaccgattcaacgagccta |
39242650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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