View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0678_low_53 (Length: 251)

Name: NF0678_low_53
Description: NF0678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0678_low_53
NF0678_low_53
[»] scaffold0014 (1 HSPs)
scaffold0014 (13-251)||(88777-89015)
[»] chr4 (16 HSPs)
chr4 (179-216)||(3438501-3438538)
chr4 (70-114)||(558493-558537)
chr4 (169-216)||(53761707-53761754)
chr4 (179-216)||(7225818-7225855)
chr4 (176-216)||(553603-553643)
chr4 (179-234)||(659836-659891)
chr4 (179-234)||(1495839-1495894)
chr4 (179-234)||(1517416-1517471)
chr4 (179-234)||(1524403-1524458)
chr4 (179-234)||(1533907-1533962)
chr4 (178-216)||(6006454-6006492)
chr4 (179-216)||(547040-547077)
chr4 (179-208)||(1552707-1552736)
chr4 (169-234)||(1600536-1600601)
chr4 (49-113)||(370894-370958)
chr4 (179-231)||(8183950-8184002)
[»] chr2 (2 HSPs)
chr2 (67-114)||(45245145-45245192)
chr2 (183-216)||(1037599-1037632)
[»] scaffold0807 (1 HSPs)
scaffold0807 (179-216)||(1399-1436)
[»] chr5 (4 HSPs)
chr5 (49-154)||(32267449-32267554)
chr5 (169-234)||(32267589-32267654)
chr5 (169-234)||(41901455-41901520)
chr5 (176-221)||(38267486-38267531)
[»] chr7 (2 HSPs)
chr7 (186-234)||(7977712-7977760)
chr7 (179-216)||(10614720-10614757)
[»] chr8 (3 HSPs)
chr8 (67-114)||(18315333-18315380)
chr8 (177-234)||(28246212-28246269)
chr8 (31-92)||(34936245-34936306)
[»] chr6 (7 HSPs)
chr6 (177-216)||(6402985-6403024)
chr6 (175-217)||(12097141-12097183)
chr6 (179-216)||(7119284-7119321)
chr6 (179-216)||(7131762-7131799)
chr6 (177-234)||(11936192-11936249)
chr6 (177-234)||(11948172-11948229)
chr6 (180-216)||(8913919-8913955)
[»] chr3 (3 HSPs)
chr3 (177-234)||(1657372-1657429)
chr3 (179-216)||(13470667-13470704)
chr3 (49-117)||(514785-514853)
[»] chr1 (1 HSPs)
chr1 (179-235)||(7554546-7554602)


Alignment Details
Target: scaffold0014 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 88777 - 89015
Alignment:
Q  13 aatattgtctaaggagagcttctccgtgatatcccaacaattttgtagttacaattgcaaaagcccatgacacctctttgagatcacatggagtgcttca 112  Q
    |||||||||||||||||||||||   ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  88777 aatattgtctaaggagagcttctatatgatatcacgacaattttgtagttacaattgcaaaagcccatgacacctctttgagatcacatggagtgcttca 88876  T
Q  113 tcgtctatgattgctcttgacaagttcaatacctccagtttgtgaattctcaatgaaacactcggttaagttcaaatgtctaatcttacaacatctcctt 212  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  88877 tcgtctatgattgttcttgacaagttcaatacctccagtttgtgaattctcaatgaaacactcagttaagttcaaatgtctaatcttacaacatctcctt 88976  T
Q  213 aaaatctgatcaataccttctttgaacatgtgcatgcaa 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  88977 aaaatctgatcaataccttctttgaacatgtgcatgcaa 89015  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 3438538 - 3438501
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3438538 taagttcaaatgtctaatcttacaacatctccttaaaa 3438501  T

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Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 558493 - 558537
Alignment:
Q  70 caaaagcccatgacacctctttgagatcacatggagtgcttcatc 114  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  558493 caaaagcccacgacaactctttgagatcacatggagtgcttcatc 558537  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 53761754 - 53761707
Alignment:
Q  169 aacactcggttaagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  53761754 aacactcggctaagttcaaatgcctaatgttacaacatctccttaaaa 53761707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 7225855 - 7225818
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    |||||||||||||||||||||||||||||||| |||||    
T  7225855 taagttcaaatgtctaatcttacaacatctccgtaaaa 7225818  T

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Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 553603 - 553643
Alignment:
Q  176 ggttaagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  553603 ggttaagttcaaatgtctaatgttacaacatgtccttaaaa 553643  T

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Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 659836 - 659891
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    |||||| |||| |||||| |||||||||||||||||||| ||| ||||| ||||||    
T  659836 taagtttaaatatctaatgttacaacatctccttaaaatttgaccaatatcttctt 659891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 1495894 - 1495839
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    ||||| ||||||| | ||||||||||||||||||||||  ||| ||||||||||||    
T  1495894 taagtccaaatgtgtcatcttacaacatctccttaaaacatgaccaataccttctt 1495839  T

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Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 1517471 - 1517416
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    ||||| ||||||| | ||||||||||||||||||||||  ||||| ||||||||||    
T  1517471 taagtccaaatgtgtcatcttacaacatctccttaaaacatgatcgataccttctt 1517416  T

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Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 1524458 - 1524403
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    |||||||||||| ||||  ||||||||||||||||||| ||||  |||||||||||    
T  1524458 taagttcaaatgcctaagtttacaacatctccttaaaacctgaagaataccttctt 1524403  T

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Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 1533962 - 1533907
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    ||||||||||||| | ||||||||||||||||||||||  |||  |||||||||||    
T  1533962 taagttcaaatgtgtcatcttacaacatctccttaaaacatgactaataccttctt 1533907  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 6006454 - 6006492
Alignment:
Q  178 ttaagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  6006454 ttaagttcaaatgtctaatcttactacatttccttaaaa 6006492  T

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Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 547040 - 547077
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    |||||||||||| || ||||||||||||||||||||||    
T  547040 taagttcaaatgccttatcttacaacatctccttaaaa 547077  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 1552736 - 1552707
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatct 208  Q
    ||||||||||||||||||||||||||||||    
T  1552736 taagttcaaatgtctaatcttacaacatct 1552707  T

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Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 1600536 - 1600601
Alignment:
Q  169 aacactcggttaagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    |||||| || |||||||||||||||||| ||| || ||||||||||||  |||  |||||||||||    
T  1600536 aacactgggctaagttcaaatgtctaattttagaaaatctccttaaaacttgacaaataccttctt 1600601  T

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Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 370894 - 370958
Alignment:
Q  49 acaattttgtagttacaattgcaaaagcccatgacacctctttgagatcacatggagtgcttcat 113  Q
    ||||||||| ||| | | ||||||||||| |  ||| ||||||||||||||||| ||||||||||    
T  370894 acaattttgcagtaatagttgcaaaagccgacaacaactctttgagatcacatgaagtgcttcat 370958  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 8184002 - 8183950
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaatctgatcaatacctt 231  Q
    ||||||||||| |||||||| |||||| ||||||||||| |||  ||||||||    
T  8184002 taagttcaaatctctaatctcacaacaactccttaaaatttgagtaatacctt 8183950  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 45245192 - 45245145
Alignment:
Q  67 ttgcaaaagcccatgacacctctttgagatcacatggagtgcttcatc 114  Q
    ||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  45245192 ttgcaaaagcccacgacaactctttgagatcacatggagtgtttcatc 45245145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 1037632 - 1037599
Alignment:
Q  183 ttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    ||||||||||||| ||||||||||||||||||||    
T  1037632 ttcaaatgtctaaccttacaacatctccttaaaa 1037599  T

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Target: scaffold0807 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 1436 - 1399
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    |||||||||||||||||||||| |||||||||||||||    
T  1436 taagttcaaatgtctaatcttataacatctccttaaaa 1399  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 154
Target Start/End: Original strand, 32267449 - 32267554
Alignment:
Q  49 acaattttgtagttacaattgcaaaagcccatgacacctctttgagatcacatggagtgcttcatcgtctatgattgctcttgacaagttcaatacctcc 148  Q
    ||||||||  ||| |||||| ||||||||||  ||| ||||||||||||| ||  ||||||||||| || |  |||| |  |||||||||||||||||||    
T  32267449 acaatttttaagtgacaatttcaaaagcccacaacaactctttgagatcatataaagtgcttcatcatcaactattgtttgtgacaagttcaatacctcc 32267548  T
Q  149 agtttg 154  Q
    | ||||    
T  32267549 aatttg 32267554  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 32267589 - 32267654
Alignment:
Q  169 aacactcggttaagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    |||||| || |||||||||||||||||| ||||||||| |||||||||  ||| | ||||||||||    
T  32267589 aacactgggataagttcaaatgtctaatgttacaacatatccttaaaaattgaacgataccttctt 32267654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 41901520 - 41901455
Alignment:
Q  169 aacactcggttaagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    |||||| || |||||||||||||||||| ||||||||  |||||||||  ||| ||||||||||||    
T  41901520 aacacttggataagttcaaatgtctaatgttacaacacatccttaaaacttgaacaataccttctt 41901455  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 38267531 - 38267486
Alignment:
Q  176 ggttaagttcaaatgtctaatcttacaacatctccttaaaatctga 221  Q
    ||||| ||||||||||||||||||||  |||||| |||||||||||    
T  38267531 ggttaggttcaaatgtctaatcttacggcatctctttaaaatctga 38267486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 7977712 - 7977760
Alignment:
Q  186 aaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    ||||||||||| |||||||||||||||||||  ||| ||||||||||||    
T  7977712 aaatgtctaatgttacaacatctccttaaaacttgaccaataccttctt 7977760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 10614720 - 10614757
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  10614720 taagttcaaatgcctaatcttacaacatatccttaaaa 10614757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 18315380 - 18315333
Alignment:
Q  67 ttgcaaaagcccatgacacctctttgagatcacatggagtgcttcatc 114  Q
    ||||||||||| | |||| |||||||||||||||| ||||||||||||    
T  18315380 ttgcaaaagcctacgacaactctttgagatcacatagagtgcttcatc 18315333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 28246269 - 28246212
Alignment:
Q  177 gttaagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    ||||| |||||||||||||| ||||||||| || ||||||  ||| ||||||||||||    
T  28246269 gttaaattcaaatgtctaatgttacaacatatcattaaaacatgaacaataccttctt 28246212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 34936306 - 34936245
Alignment:
Q  31 cttctccgtgatatcccaacaattttgtagttacaattgcaaaagcccatgacacctctttg 92  Q
    ||||||||||| ||| ||||||||||| ||| | | ||||||||||||| |||| |||||||    
T  34936306 cttctccgtgacatcacaacaattttgaagtaatagttgcaaaagcccacgacaactctttg 34936245  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 6402985 - 6403024
Alignment:
Q  177 gttaagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  6402985 gttaagttcaaatgcctaatgttacaacatctccttaaaa 6403024  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 12097141 - 12097183
Alignment:
Q  175 cggttaagttcaaatgtctaatcttacaacatctccttaaaat 217  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||    
T  12097141 cggttaagttcaaatgtgtaatgttacaacatatccttaaaat 12097183  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 7119284 - 7119321
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  7119284 taagttcaaatgtttaatcttagaacatctccttaaaa 7119321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 7131762 - 7131799
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  7131762 taagttcaaatgtttaatcttagaacatctccttaaaa 7131799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 11936249 - 11936192
Alignment:
Q  177 gttaagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    ||||| |||||||||||||| ||||||||| || ||||||  ||| ||||||||||||    
T  11936249 gttaaattcaaatgtctaatgttacaacatatcattaaaacatgaacaataccttctt 11936192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 11948229 - 11948172
Alignment:
Q  177 gttaagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    ||||| |||||||||||||| ||||||||| || ||||||  ||| ||||||||||||    
T  11948229 gttaaattcaaatgtctaatgttacaacatatcattaaaacatgaacaataccttctt 11948172  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 8913955 - 8913919
Alignment:
Q  180 aagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    |||||||||||| |||||||||||||||| |||||||    
T  8913955 aagttcaaatgtttaatcttacaacatcttcttaaaa 8913919  T

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Target: chr3 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 1657372 - 1657429
Alignment:
Q  177 gttaagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttctt 234  Q
    ||||| |||||||||||||| ||||||||| || ||||||  ||| ||||||||||||    
T  1657372 gttaaattcaaatgtctaatgttacaacatatcattaaaacatgaacaataccttctt 1657429  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 13470704 - 13470667
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaa 216  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  13470704 taagttcaaatgcctaatcttacaacatatccttaaaa 13470667  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 514853 - 514785
Alignment:
Q  49 acaattttgtagttacaattgcaaaagcccatgacacctctttgagatcacatggagtgcttcatcgtc 117  Q
    ||||||||| ||| | | |||||||||||||   || ||||| ||||||||||| ||||||||||||||    
T  514853 acaattttgcagtaatagttgcaaaagcccacagcaactcttcgagatcacatgaagtgcttcatcgtc 514785  T

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Target: chr1 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 7554546 - 7554602
Alignment:
Q  179 taagttcaaatgtctaatcttacaacatctccttaaaatctgatcaataccttcttt 235  Q
    |||||||||||||||||| |||  |||||| |||||||| |||  ||||||||||||    
T  7554546 taagttcaaatgtctaatgttatgacatcttcttaaaatgtgaaaaataccttcttt 7554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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