View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0678_low_62 (Length: 228)
Name: NF0678_low_62
Description: NF0678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0678_low_62 |
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Alignment Details
Target: chr6 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 14736326 - 14736469
Alignment:
| Q |
1 |
ttctccatctccgaggggtatgagccaccacataaatcataaccaaggaaatgtgttatggaaattattcagcttgaggaattgaagattttctgatttt |
100 |
Q |
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||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14736326 |
ttctctatctccgaggtgtatgagccaccacacaaatcataaccaagaaaatgtgttatggaaattattcagcttgaggaattgaagattttctgatttt |
14736425 |
T |
|
| Q |
101 |
ggaaaagcacccatttatctatcaacccaagttagatatttttg |
144 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
14736426 |
ggaaaagcactcatttatctatcaacccaagttagatatttttg |
14736469 |
T |
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