View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0679_high_2 (Length: 615)

Name: NF0679_high_2
Description: NF0679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0679_high_2
NF0679_high_2
[»] chr4 (39 HSPs)
chr4 (29-308)||(13095387-13095664)
chr4 (94-308)||(17381783-17381997)
chr4 (312-459)||(33536785-33536932)
chr4 (312-459)||(33537062-33537209)
chr4 (231-308)||(19877753-19877831)
chr4 (231-309)||(23138035-23138113)
chr4 (231-308)||(56235149-56235227)
chr4 (223-310)||(13880449-13880537)
chr4 (237-308)||(14965337-14965409)
chr4 (231-309)||(10125684-10125763)
chr4 (231-309)||(22100914-22100993)
chr4 (222-308)||(23621638-23621725)
chr4 (231-309)||(37175373-37175452)
chr4 (223-309)||(56038611-56038698)
chr4 (231-309)||(56513658-56513737)
chr4 (231-308)||(27851167-27851245)
chr4 (231-308)||(28002514-28002592)
chr4 (223-308)||(45250070-45250156)
chr4 (231-308)||(52183855-52183933)
chr4 (231-308)||(44570794-44570871)
chr4 (221-308)||(288344-288432)
chr4 (237-308)||(1788803-1788875)
chr4 (231-312)||(22320524-22320607)
chr4 (223-308)||(29832261-29832348)
chr4 (231-308)||(53334060-53334139)
chr4 (223-309)||(22019089-22019176)
chr4 (223-309)||(23236997-23237086)
chr4 (231-308)||(4294132-4294210)
chr4 (231-308)||(22842905-22842983)
chr4 (223-308)||(29494958-29495044)
chr4 (223-308)||(30088793-30088879)
chr4 (223-308)||(34447632-34447718)
chr4 (231-308)||(34735919-34735997)
chr4 (223-308)||(47869236-47869322)
chr4 (223-308)||(49235954-49236040)
chr4 (223-275)||(13397981-13398034)
chr4 (231-308)||(30649790-30649867)
chr4 (231-309)||(38852840-38852920)
chr4 (255-310)||(23222469-23222525)
[»] chr5 (42 HSPs)
chr5 (77-309)||(19599348-19599582)
chr5 (183-308)||(13952147-13952273)
chr5 (231-308)||(29665314-29665392)
chr5 (231-308)||(21195240-21195317)
chr5 (231-309)||(18026103-18026182)
chr5 (231-308)||(4431512-4431590)
chr5 (231-308)||(22510400-22510478)
chr5 (231-309)||(33858-33937)
chr5 (29-115)||(13952007-13952094)
chr5 (223-309)||(35189176-35189263)
chr5 (231-313)||(38394330-38394413)
chr5 (223-308)||(29619413-29619499)
chr5 (231-308)||(4744705-4744782)
chr5 (231-308)||(39932811-39932888)
chr5 (223-309)||(27187408-27187495)
chr5 (231-308)||(5070779-5070857)
chr5 (223-308)||(5378161-5378247)
chr5 (223-308)||(10370547-10370633)
chr5 (247-308)||(32706731-32706793)
chr5 (231-308)||(40555069-40555147)
chr5 (223-311)||(9461355-9461444)
chr5 (231-308)||(11312946-11313023)
chr5 (231-308)||(15268477-15268554)
chr5 (231-308)||(8035742-8035821)
chr5 (275-311)||(18652455-18652491)
chr5 (223-308)||(25538039-25538126)
chr5 (223-310)||(36302454-36302542)
chr5 (231-311)||(5288842-5288924)
chr5 (231-308)||(7458576-7458654)
chr5 (223-308)||(8542760-8542846)
chr5 (231-308)||(9641019-9641097)
chr5 (223-312)||(11130147-11130237)
chr5 (223-308)||(12360787-12360873)
chr5 (231-308)||(19712482-19712560)
chr5 (231-308)||(24781168-24781246)
chr5 (231-308)||(34900204-34900284)
chr5 (233-270)||(1887324-1887361)
chr5 (231-311)||(19282645-19282726)
chr5 (231-311)||(35584917-35584998)
chr5 (231-306)||(2914425-2914501)
chr5 (275-311)||(32706982-32707018)
chr5 (237-308)||(33629939-33630011)
[»] chr1 (35 HSPs)
chr1 (88-308)||(38201844-38202064)
chr1 (29-309)||(4756435-4756710)
chr1 (231-308)||(31023793-31023870)
chr1 (223-307)||(5653683-5653768)
chr1 (231-308)||(23825205-23825282)
chr1 (231-308)||(28121255-28121332)
chr1 (231-308)||(39673701-39673780)
chr1 (223-308)||(6920925-6921011)
chr1 (231-308)||(13352451-13352529)
chr1 (231-309)||(31500730-31500808)
chr1 (231-308)||(33488105-33488183)
chr1 (223-308)||(38238866-38238952)
chr1 (231-308)||(51417570-51417648)
chr1 (223-310)||(30679271-30679359)
chr1 (231-308)||(39655352-39655431)
chr1 (223-310)||(50324825-50324913)
chr1 (231-309)||(4226238-4226317)
chr1 (223-305)||(34347274-34347357)
chr1 (231-309)||(51905800-51905879)
chr1 (243-308)||(2733841-2733907)
chr1 (231-308)||(6540667-6540745)
chr1 (223-308)||(18127334-18127420)
chr1 (223-308)||(31045538-31045624)
chr1 (223-308)||(32145353-32145439)
chr1 (231-308)||(35369597-35369675)
chr1 (231-308)||(42219790-42219868)
chr1 (231-308)||(83110-83187)
chr1 (231-276)||(26061865-26061910)
chr1 (231-276)||(52001212-52001257)
chr1 (275-308)||(52667061-52667094)
chr1 (231-308)||(7572508-7572587)
chr1 (231-308)||(9264988-9265067)
chr1 (231-308)||(15170268-15170347)
chr1 (231-308)||(16051851-16051930)
chr1 (231-308)||(35379717-35379796)
[»] chr7 (39 HSPs)
chr7 (77-301)||(21945274-21945498)
chr7 (231-308)||(31466048-31466126)
chr7 (231-308)||(36669731-36669809)
chr7 (223-309)||(36916665-36916752)
chr7 (237-308)||(48339447-48339518)
chr7 (223-308)||(13439317-13439403)
chr7 (223-308)||(28536956-28537042)
chr7 (231-308)||(31502808-31502886)
chr7 (223-308)||(44894769-44894855)
chr7 (223-309)||(47578875-47578961)
chr7 (231-308)||(22369503-22369582)
chr7 (223-309)||(6882839-6882926)
chr7 (222-308)||(10453102-10453189)
chr7 (223-308)||(4513555-4513641)
chr7 (223-308)||(8611813-8611899)
chr7 (223-308)||(11910627-11910713)
chr7 (223-308)||(23059070-23059156)
chr7 (231-308)||(28703543-28703621)
chr7 (231-308)||(29410289-29410367)
chr7 (223-308)||(29985965-29986051)
chr7 (231-307)||(30264427-30264505)
chr7 (231-304)||(30803288-30803362)
chr7 (232-298)||(32466362-32466428)
chr7 (223-308)||(35144282-35144368)
chr7 (231-308)||(40536984-40537062)
chr7 (223-308)||(44480986-44481072)
chr7 (223-308)||(46373198-46373284)
chr7 (223-308)||(47834347-47834433)
chr7 (223-305)||(10316551-10316635)
chr7 (231-308)||(17611508-17611585)
chr7 (231-308)||(23709560-23709637)
chr7 (231-308)||(22326729-22326808)
chr7 (274-314)||(22918412-22918452)
chr7 (275-311)||(23726370-23726406)
chr7 (237-308)||(27059748-27059820)
chr7 (233-281)||(30643239-30643286)
chr7 (237-308)||(32467807-32467879)
chr7 (275-311)||(38074752-38074788)
chr7 (275-311)||(43884120-43884156)
[»] chr3 (43 HSPs)
chr3 (29-308)||(53536709-53536983)
chr3 (94-257)||(53533245-53533408)
chr3 (223-308)||(40710708-40710794)
chr3 (231-308)||(8724279-8724357)
chr3 (231-308)||(9076166-9076244)
chr3 (223-308)||(41751101-41751187)
chr3 (231-309)||(32078017-32078097)
chr3 (231-309)||(39259257-39259336)
chr3 (222-308)||(43599570-43599657)
chr3 (222-308)||(45824080-45824167)
chr3 (231-308)||(22926036-22926114)
chr3 (223-308)||(23609429-23609515)
chr3 (223-308)||(25904104-25904190)
chr3 (223-308)||(34663430-34663516)
chr3 (223-308)||(35084533-35084619)
chr3 (223-308)||(38783637-38783723)
chr3 (231-308)||(43185344-43185422)
chr3 (223-308)||(52040445-52040531)
chr3 (231-308)||(52870641-52870719)
chr3 (231-308)||(9794474-9794550)
chr3 (231-275)||(3348986-3349030)
chr3 (223-309)||(24089327-24089414)
chr3 (223-308)||(3645901-3645987)
chr3 (223-308)||(19961021-19961107)
chr3 (231-308)||(29651993-29652071)
chr3 (223-308)||(30190323-30190409)
chr3 (231-308)||(34817108-34817186)
chr3 (231-308)||(39290536-39290614)
chr3 (222-308)||(41979876-41979962)
chr3 (231-308)||(45347203-45347283)
chr3 (231-308)||(47109266-47109344)
chr3 (231-308)||(47498108-47498186)
chr3 (223-308)||(48333710-48333796)
chr3 (223-308)||(52060467-52060553)
chr3 (223-308)||(54747903-54747989)
chr3 (231-305)||(38808089-38808165)
chr3 (232-308)||(41265511-41265588)
chr3 (231-303)||(49102436-49102511)
chr3 (236-308)||(51380233-51380306)
chr3 (275-311)||(43185595-43185631)
chr3 (231-308)||(43600867-43600946)
chr3 (231-308)||(51571751-51571830)
chr3 (257-308)||(53533634-53533686)
[»] chr8 (44 HSPs)
chr8 (152-308)||(42919021-42919178)
chr8 (231-308)||(15225840-15225917)
chr8 (231-309)||(12988185-12988265)
chr8 (231-308)||(31692734-31692811)
chr8 (223-308)||(45439513-45439598)
chr8 (231-312)||(2099167-2099249)
chr8 (223-311)||(7427365-7427454)
chr8 (232-301)||(43564593-43564662)
chr8 (231-308)||(31602917-31602996)
chr8 (231-308)||(39628841-39628920)
chr8 (231-308)||(39638391-39638470)
chr8 (223-308)||(9267998-9268084)
chr8 (231-308)||(26805028-26805106)
chr8 (223-308)||(29938290-29938376)
chr8 (223-308)||(31873615-31873701)
chr8 (223-308)||(32395232-32395318)
chr8 (223-309)||(5830941-5831028)
chr8 (223-309)||(6878511-6878598)
chr8 (223-309)||(24422505-24422592)
chr8 (231-305)||(28848959-28849034)
chr8 (223-309)||(30087923-30088010)
chr8 (223-309)||(30526156-30526243)
chr8 (231-308)||(1953272-1953350)
chr8 (223-308)||(11714438-11714524)
chr8 (223-308)||(14433344-14433430)
chr8 (231-308)||(16861952-16862030)
chr8 (231-308)||(29342706-29342784)
chr8 (231-308)||(29440864-29440942)
chr8 (223-308)||(31231070-31231156)
chr8 (223-308)||(35544188-35544274)
chr8 (231-308)||(38044914-38044992)
chr8 (231-308)||(38194670-38194748)
chr8 (231-308)||(41256404-41256482)
chr8 (223-303)||(899558-899639)
chr8 (275-308)||(16861746-16861779)
chr8 (231-308)||(26513689-26513766)
chr8 (231-308)||(28868722-28868799)
chr8 (274-311)||(31230473-31230510)
chr8 (231-311)||(35631024-35631105)
chr8 (274-310)||(543568-543604)
chr8 (231-308)||(11181242-11181321)
chr8 (237-308)||(18526333-18526405)
chr8 (231-308)||(26394023-26394102)
chr8 (223-310)||(39284194-39284282)
[»] chr2 (34 HSPs)
chr2 (317-469)||(23973362-23973516)
chr2 (521-607)||(23973608-23973694)
chr2 (237-308)||(40483605-40483676)
chr2 (231-308)||(37985524-37985601)
chr2 (223-310)||(30780054-30780142)
chr2 (231-311)||(43446531-43446611)
chr2 (231-274)||(28248492-28248535)
chr2 (231-309)||(38959734-38959813)
chr2 (223-308)||(325327-325413)
chr2 (231-308)||(5421433-5421511)
chr2 (231-308)||(14309108-14309186)
chr2 (231-308)||(22154216-22154294)
chr2 (464-506)||(23973550-23973592)
chr2 (231-308)||(27863004-27863082)
chr2 (231-309)||(43521597-43521675)
chr2 (231-304)||(14780906-14780979)
chr2 (231-308)||(40649052-40649129)
chr2 (231-311)||(3873614-3873696)
chr2 (223-309)||(28786919-28787006)
chr2 (231-311)||(32068419-32068501)
chr2 (223-308)||(7491649-7491735)
chr2 (231-308)||(11216592-11216670)
chr2 (231-308)||(16198392-16198470)
chr2 (223-308)||(19576046-19576132)
chr2 (247-308)||(23498037-23498099)
chr2 (231-308)||(30549773-30549851)
chr2 (231-308)||(37111205-37111283)
chr2 (231-309)||(1666962-1667042)
chr2 (231-311)||(34504338-34504419)
chr2 (231-308)||(36845820-36845896)
chr2 (255-313)||(40425188-40425248)
chr2 (275-311)||(3376427-3376463)
chr2 (237-308)||(8444207-8444279)
chr2 (237-301)||(19505842-19505906)
[»] scaffold0014 (1 HSPs)
scaffold0014 (312-459)||(125567-125715)
[»] chr6 (19 HSPs)
chr6 (307-458)||(16207923-16208074)
chr6 (223-309)||(9961314-9961401)
chr6 (231-308)||(34283343-34283421)
chr6 (231-308)||(2010272-2010350)
chr6 (231-308)||(10629520-10629598)
chr6 (231-308)||(16524721-16524799)
chr6 (231-313)||(31022590-31022672)
chr6 (223-308)||(31949336-31949422)
chr6 (223-308)||(32142375-32142461)
chr6 (247-308)||(29343975-29344038)
chr6 (223-309)||(11172884-11172971)
chr6 (232-310)||(12058567-12058646)
chr6 (223-308)||(8201460-8201546)
chr6 (231-308)||(16466365-16466443)
chr6 (231-308)||(4130853-4130930)
chr6 (274-311)||(6612625-6612662)
chr6 (231-308)||(24053149-24053226)
chr6 (223-308)||(9461573-9461660)
chr6 (231-308)||(24430148-24430227)
[»] scaffold0009 (1 HSPs)
scaffold0009 (231-309)||(8436-8514)
[»] scaffold0172 (1 HSPs)
scaffold0172 (223-308)||(18388-18474)
[»] scaffold0011 (1 HSPs)
scaffold0011 (223-308)||(63344-63430)
[»] scaffold0444 (1 HSPs)
scaffold0444 (231-309)||(7594-7673)
[»] scaffold0074 (1 HSPs)
scaffold0074 (231-308)||(17458-17536)
[»] scaffold0983 (1 HSPs)
scaffold0983 (231-308)||(1273-1352)
[»] scaffold0018 (1 HSPs)
scaffold0018 (231-308)||(151639-151718)
[»] scaffold0166 (1 HSPs)
scaffold0166 (231-308)||(23551-23629)
[»] scaffold0459 (1 HSPs)
scaffold0459 (231-308)||(11699-11778)
[»] scaffold0366 (1 HSPs)
scaffold0366 (231-308)||(13006-13085)


Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-119; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 29 - 308
Target Start/End: Complemental strand, 13095664 - 13095387
Alignment:
Q  29 acaatttgtggagagatatagtcaatagttaagttcagtctctaatttaatttaatgtggattagtatgagaaccgtgaataacaataaatacatgggaa 128  Q
    ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13095664 acaatttgtggagaga----gtcaatagttaagttcagtctctaatttaatttaatgtggattagtatgggaaccgtgaataacaataaatacatgggaa 13095569  T
Q  129 ccatgaataaaaagttaattatggattatgagaaccttgaataaaaagttttggaaaaagagaatagacaagggtaaattaggaagaacatgaataattt 228  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  13095568 ccgtgaataaaaagttaattatggattatgagaaccttgaataaaaagttttggaaaaagagaatagacaagggcaaattaggaagaatatgaataattt 13095469  T
Q  229 tacattgatattgcaaaacgacttataatttgggacaa--aattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| |||||||||||| |||||||||||||||||||    ||||||||||||||||||| ||||||||||||||||||||    
T  13095468 tacatcgatattgcaaaatgacttataatttgggacaattttttttttccaaaacgtcatatattgtgggacggagggagta 13095387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 94 - 308
Target Start/End: Complemental strand, 17381997 - 17381783
Alignment:
Q  94 tatgagaaccgtgaataacaataaatacatgggaaccatgaataaaaagttaattatggattatgagaaccttgaataaaaagttttggaaaaagagaat 193  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17381997 tatgggaaccgtgaataacaatacatacatgggaaccgtgaataaaaagtgaattatcgattatgagaaccttgagtaaaaagttttggaaaaagagaat 17381898  T
Q  194 agacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgt 293  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17381897 agacaagggcaaattaggaagaacatgaataatttttcattgatattacaaaacgacttataatttgggacaaaattttttccaaaacgtcatacactgt 17381798  T
Q  294 gggacggagggagta 308  Q
    |||||||||| ||||    
T  17381797 gggacggaggtagta 17381783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 312 - 459
Target Start/End: Complemental strand, 33536932 - 33536785
Alignment:
Q  312 tgaatcaacagtgtaatgaaacgggtaaaaaagtgagagtgtggtaaaaaactcaggattctcccatttcaaattttattaccacgttacccttcaataa 411  Q
    |||||||| |||||||||||  || || ||| || | |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  33536932 tgaatcaatagtgtaatgaagaggttagaaatgtcacagtgtggtaaaaaactcagggttctcccatttcaaattttattaccatgttatccttcaataa 33536833  T
Q  412 agcgaaattaaagtgcagttaaaaaagtagaagcagggacagttgtgc 459  Q
    || ||| ||| |||||||||||||| ||||||| ||||||||||||||    
T  33536832 agtgaacttacagtgcagttaaaaatgtagaaggagggacagttgtgc 33536785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 312 - 459
Target Start/End: Complemental strand, 33537209 - 33537062
Alignment:
Q  312 tgaatcaacagtgtaatgaaacgggtaaaaaagtgagagtgtggtaaaaaactcaggattctcccatttcaaattttattaccacgttacccttcaataa 411  Q
    |||||||| |||||||||||  || || ||| || | |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  33537209 tgaatcaatagtgtaatgaagaggttagaaatgtcacagtgtggtaaaaaactcagggttctcccatttcaaattttattaccatgttatccttcaataa 33537110  T
Q  412 agcgaaattaaagtgcagttaaaaaagtagaagcagggacagttgtgc 459  Q
    || ||| ||| |||||||||||||| ||||||| ||||||||||||||    
T  33537109 agtgaacttacagtgcagttaaaaatgtagaaggagggacagttgtgc 33537062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 19877831 - 19877753
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||||||||| || |||||| | ||||||||||||||||    
T  19877831 cattggtattgtaaagcgacatataatttgggacaaatattttttccaaagcgacatacaatttgggacggagggagta 19877753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 23138113 - 23138035
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| || |||||| | |||||||||||||||||    
T  23138113 cattggtattgtaaagcgacatataatttgggacaattttttttccaaagcgacatacaatttgggacggagggagtaa 23138035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 56235227 - 56235149
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||||||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  56235227 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 56235149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 13880537 - 13880449
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 310  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||||    
T  13880537 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaaa 13880449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 14965409 - 14965337
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||| |||| || ||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  14965409 tattgcaaagcgacatacaatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 14965337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 10125684 - 10125763
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||| ||||||| || |||||| | |||||||||||||||||    
T  10125684 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagtaa 10125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 22100993 - 22100914
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| ||||||||||||||| ||||||| ||||| || |||||| | |||||||||||||||||    
T  22100993 cattggtattgtaaagcgacatataatttgggacaacatttttttccaaagcgacatacaatttgggacggagggagtaa 22100914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 222 - 308
Target Start/End: Complemental strand, 23621725 - 23621638
Alignment:
Q  222 ataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  23621725 ataatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 23621638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 37175373 - 37175452
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||| ||||||| || |||||| | |||||||||||||||||    
T  37175373 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagtaa 37175452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 56038611 - 56038698
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  56038611 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 56038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 56513658 - 56513737
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||||||||||||||||||||  |||||||||||  | |||||| | |||||||||||||||||    
T  56513658 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagggacatacaatttgggacggagggagtaa 56513737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 27851245 - 27851167
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| ||||||||||||||||| ||| |||||| ||||| || |||||| | ||||||||||||||||    
T  27851245 cattggtattgtaaagcgacttataatttgggataaattttttttccaaagcgacatacaatttgggacggagggagta 27851167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 28002592 - 28002514
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| ||||||||||||||||  ||||||||||| |  |||||| | ||||||||||||||||    
T  28002592 cattggtattgtaaaacgacatataatttgggacaaattttttttccaaagcaacatacaatttgggacggagggagta 28002514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 45250156 - 45250070
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  45250156 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 45250070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 52183933 - 52183855
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatt-ttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| |||||||| |||||||| |||||||||| |||||| || || |||||| | ||||| ||||||||||    
T  52183933 cattgatattgtaaaacgacatataatttaggacaaaatttttttccgaagcgacatacaatttgggatggagggagta 52183855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 44570871 - 44570794
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||||||||||| |||||| | |||||| ||| |||||    
T  44570871 cattggtattgtaaagcgacatataatttgggacaattttttttccaaaacggcatacaatttgggacagagagagta 44570794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 288432 - 288344
Alignment:
Q  221 aataattttacattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||| || ||||| ||||| ||| |||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  288432 aataatatttcattggtattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 288344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 1788803 - 1788875
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||| |||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||    
T  1788803 tattgtaaagcgacatataatttgggacaaatattttttctaaagcgacatacaatttgggacggagggagta 1788875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 22320607 - 22320524
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt--ccaaaacgtcatacattgtgggacggagggagtaaaat 312  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||  ||||| || |||||| | |||||| |||||||||||||    
T  22320607 cattggtattgtaaagcgacatataatttgggacaaatttttttttccaaagcgacatacaatttgggacagagggagtaaaat 22320524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 29832261 - 29832348
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaaattttt--tccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||| |||||||| ||||| ||| |||| |||||||||||||||| |||||  || ||| || |||||| | ||||||||||||||||    
T  29832261 taatgttacattggtattgtaaagcgacatataatttgggacaaatttttttctctaaagcgacatacaatttgggacggagggagta 29832348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 53334060 - 53334139
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | |||||| |||||||||    
T  53334060 cattgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggaccgagggagta 53334139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 22019176 - 22019089
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  22019176 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 22019089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 23237086 - 23236997
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaaatttttt---ccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    |||| |||||||| ||||| ||| |||| |||||||||||||||| ||||||   | ||| || |||||| | |||||||||||||||||    
T  23237086 taatgttacattggtattgtaaagcgacatataatttgggacaaattttttttccctaaagcgacatacaatttgggacggagggagtaa 23236997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 4294132 - 4294210
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  4294132 cattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 4294210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 22842983 - 22842905
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  22842983 cattggtattgtaaagcgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 22842905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 29494958 - 29495044
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| | || || ||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||    
T  29494958 taatttttcattggtattgtaaagcaacatacaatttgggacaaatattttttctaaagcgacatacaatttgggacggagggagta 29495044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 30088793 - 30088879
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  30088793 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 30088879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 34447718 - 34447632
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| |||||  || |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  34447718 taatttttcattggtattgtgaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 34447632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 34735997 - 34735919
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||  |||||||| |||||||||||||||  ||||| || ||| || |||||| | ||||||||||||||||    
T  34735997 cattgatattttaaaacgacatataatttgggacaatttttttccctaaagcgacatacaatttgggacggagggagta 34735919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 47869236 - 47869322
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||| ||||||||||||    
T  47869236 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaattgacatacaatttggaacggagggagta 47869322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 49235954 - 49236040
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  49235954 taatttttcattggtattgtaaagcgacatagaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 49236040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 13397981 - 13398034
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttc 275  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| ||||||||    
T  13397981 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttc 13398034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 30649790 - 30649867
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| |  |||||| | ||| ||||||||||||    
T  30649790 cattggtattgtaaagcgacatataatttgggacaattttttttccaaagcaacatacaatttggaacggagggagta 30649867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 38852840 - 38852920
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa--attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| ||||||||||||||||   ||||||| |||||| |||||| | | |||||||||||||||    
T  38852840 cattggtattgtaaagcgacatataatttgggacaaatttttttttctaaaacgacatacaatttaggacggagggagtaa 38852920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 23222525 - 23222469
Alignment:
Q  255 aatttgggacaaaattttttccaaaa-cgtcatacattgtgggacggagggagtaaa 310  Q
    ||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||||    
T  23222525 aatttgggacaaatttttttcctaaagcgacatacaatttgggacggagggagtaaa 23222469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 196; Significance: 1e-106; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 77 - 309
Target Start/End: Original strand, 19599348 - 19599582
Alignment:
Q  77 aatttaatgtggattagtatgagaaccgtgaataacaataaatacatgggaaccatgaataaaaagttaattatggattatgagaaccttgaataaaaag 176  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  19599348 aatttaatgtggattagtatgggaaccgtgaataacaataaatacatgggaaccgtgaataacaagtgaattatggattatgagaaccttgaataaaaag 19599447  T
Q  177 ttttggaaaaagagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaattttt--t 274  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||  |    
T  19599448 ttttggaaaaagagaatagacaagggcaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaattttttttct 19599547  T
Q  275 ccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    |||||||||||||||||||||||||||||||||||    
T  19599548 ccaaaacgtcatacattgtgggacggagggagtaa 19599582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 13952147 - 13952273
Alignment:
Q  183 aaaaagagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaac 281  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||| |||||||    
T  13952147 aaaaagagaatagacaagggcaaattaggaagaacatgaataattttatattgatattgcaaaacggcttataatttgtgacaaatttttttcccaaaac 13952246  T
Q  282 gtcatacattgtgggacggagggagta 308  Q
    |||||||| | ||||||||||||||||    
T  13952247 gtcatacaatttgggacggagggagta 13952273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 29665392 - 29665314
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||| | | ||||||||||||||    
T  29665392 cattgatattgtaaaacgacatataatttgggacaaatattttttccaaaacgacatacaatttaggacggagggagta 29665314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 21195240 - 21195317
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||||||||||||||| || |||||| | ||||||||||||||||    
T  21195240 cattggtattgtaaagcgacatataatttgggacaaaattttttccaaagcgacatacaatttgggacggagggagta 21195317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 18026103 - 18026182
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||||||||| || |||||| | |||||||||||||||||    
T  18026103 cattgatattgtaaagcgacatataatttgggacaaatattttttccaaagcgacatacaatttgggacggagggagtaa 18026182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 4431590 - 4431512
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||||| |||||||| |||||| | ||||||||||||||||    
T  4431590 cattgatattgtaaagcgacatataatttgagacaaaatttttttccaaaacgacatacaatttgggacggagggagta 4431512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 22510478 - 22510400
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  22510478 cattgatattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 22510400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 33858 - 33937
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||||||| |||| ||||||||||||||||  ||||||||||| || |||||| | |||||||||||||||||    
T  33858 cattggtattgcaaagcgacatataatttgggacaaagtttttttccaaagcgacatacaatttgggacggagggagtaa 33937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 13952007 - 13952094
Alignment:
Q  29 acaatttgtggagagatatagtcaatagttaagttcagtctctaa-tttaatttaatgtggattag--tatgagaaccgtgaataacaat 115  Q
    |||||||||||||||| |  ||| |||||||| |||||||||||| ||||||||||| ||||||||  |||| |||||||||||||||||    
T  13952007 acaatttgtggagagaga--gtctatagttaacttcagtctctaaatttaatttaatatggattagtatatgggaaccgtgaataacaat 13952094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 35189263 - 35189176
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||| | |||||||||||||||||    
T  35189263 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagtaa 35189176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 38394330 - 38394413
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagtaaaatg 313  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||| |||||||||| |||||| | |||||||||||||||| ||||    
T  38394330 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagtataatg 38394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 29619413 - 29619499
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  29619413 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 29619499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 4744782 - 4744705
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | |||||||||| |||||    
T  4744782 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacggagagagta 4744705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 39932888 - 39932811
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  39932888 cattggtattgtaaagcgacatataatttgggacaattttttttccaaagcgacatacaatttgggacggagggagta 39932811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 27187408 - 27187495
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| ||||||||||||  | |||||| | | |||||||||||||||    
T  27187408 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttccaaagtgacatacaatttaggacggagggagtaa 27187495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 5070857 - 5070779
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||| ||||| |||||| ||||| || |||||| | ||||||||||||||||    
T  5070857 cattgatattgtaaagcgacatataatttggaacaaattttttttccaaagcgacatacaatttgggacggagggagta 5070779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 5378161 - 5378247
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  5378161 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 5378247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 10370633 - 10370547
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||  ||| |||||| ||| |||| |||||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  10370633 taattttttattaatattgtaaagcgacatataatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 10370547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 32706793 - 32706731
Alignment:
Q  247 cgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||| |||||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  32706793 cgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 32706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 40555147 - 40555069
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||||| |||||| | ||||| ||||||||||    
T  40555147 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaaaacgacatacaatttgggatggagggagta 40555069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 9461444 - 9461355
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| ||| ||  ||||| | |||||| ||||||||||||    
T  9461444 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagcgaaatacaatttgggacagagggagtaaaa 9461355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 11313023 - 11312946
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| |||||||| ||| ||| ||||||| |||  |||||||| | ||||||||||||||||    
T  11313023 cattggtattgtaaaacgacatataatttaggataaatttttttctaaagtgtcatacaatttgggacggagggagta 11312946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 15268477 - 15268554
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||| ||| |||||||||||||| |||||| | |||||  |||||||||    
T  15268477 cattggtattgtaaagcgacatataatttgggataaatttttttccaaaacgacatacaatttgggatcgagggagta 15268554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 8035821 - 8035742
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt--ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||  |||||||| |||||| | |||||| |||||||||    
T  8035821 cattggtattgtaaagcgacatataatttgggacaaatttttttttccaaaacgacatacaatttgggacagagggagta 8035742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 18652455 - 18652491
Alignment:
Q  275 ccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18652455 ccaaaacgtcatacattttgggacggagggagtaaaa 18652491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 25538126 - 25538039
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    |||| |||||||| ||||| |||||||| |||||||| | ||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  25538126 taatgttacattggtattgtaaaacgacatataatttagaacaaatttttttccctaaagcgacatacaatttgggacggagggagta 25538039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 310
Target Start/End: Original strand, 36302454 - 36302542
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 310  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | |||||| |||||||||||    
T  36302454 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacagagggagtaaa 36302542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 311
Target Start/End: Complemental strand, 5288924 - 5288842
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||| ||||| ||| |||| ||||||||| |||||| ||||| ||  |||||| |||||| | |||||||||||||||||||    
T  5288924 cattggtattgtaaagcgacatataatttgagacaaattttttcccctaaaacgacatacaatttgggacggagggagtaaaa 5288842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 7458654 - 7458576
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  7458654 cattggtattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 7458576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 8542846 - 8542760
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||| ||||||    
T  8542846 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggaaggagta 8542760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 9641097 - 9641019
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||||||||||||||||||||  ||||||||||| || |||||| | |||||| |||| ||||    
T  9641097 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagcgacatacaatttgggacagaggaagta 9641019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 11130237 - 11130147
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaat 312  Q
    ||||||| ||||| ||||| |||||||| || ||||| ||||||| |||||||| |||    |||||| | ||||||||||||||||||||    
T  11130237 taatttttcattggtattgtaaaacgacatacaatttaggacaaatattttttctaaagtaacatacaatttgggacggagggagtaaaat 11130147  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 12360873 - 12360787
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  12360873 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 12360787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 19712560 - 19712482
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| ||||||||||||| |||||||  ||||||||||| || |||||| | ||||||||||| ||||    
T  19712560 cattggtattgtaaagcgacttataatttaggacaaattttttttccaaagcgacatacaatttgggacggaggcagta 19712482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 24781168 - 24781246
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||| ||||||| || |||||| | ||||||||||||||||    
T  24781168 cattggtattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 24781246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 34900204 - 34900284
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaa---aattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||     |||||||||||||| |||||| | ||||||||||||||||    
T  34900204 cattggtattgtaaagcgacatataatttgggacaatttttttttttccaaaacgacatacaatttgggacggagggagta 34900284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 1887324 - 1887361
Alignment:
Q  233 ttgatattgcaaaacgacttataatttgggacaaaatt 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  1887324 ttgatattctaaaacgacttataatttgggacaaaatt 1887361  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 19282645 - 19282726
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaa-cgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||| ||||| ||| |||| ||||||||| |||||| |||||| | ||| || |||||| | |||||||||||||||||||    
T  19282645 cattggtattgtaaagcgacgtataatttgagacaaatttttttgctaaagcgacatacaatttgggacggagggagtaaaa 19282726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 35584917 - 35584998
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaa-cgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||| | ||| || |||||| | |||||||||||||||||||    
T  35584917 cattggtattgtaaagcgacatataatttgggacaatttttttttctaaagcgacatacaatttgggacggagggagtaaaa 35584998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 2914501 - 2914425
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggag 306  Q
    ||||| ||||| ||| |||| ||||||||||||||||  |||||| |||| || |||||| | ||||||||||||||    
T  2914501 cattggtattgtaaagcgacatataatttgggacaaatttttttttcaaagcgacatacaatttgggacggagggag 2914425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 32706982 - 32707018
Alignment:
Q  275 ccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||||||||||| | |||||||||||||||||||    
T  32706982 ccaaaacgtcatacaatttgggacggagggagtaaaa 32707018  T

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Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 33629939 - 33630011
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||| |||| ||||||||||||||||  ||||||||| |||| |||||| | |||||| |||||||||    
T  33629939 tattgtaaagcgacatataatttgggacaaattttttttccagaacgacatacaatttgggactgagggagta 33630011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 181; Significance: 2e-97; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 88 - 308
Target Start/End: Complemental strand, 38202064 - 38201844
Alignment:
Q  88 gattagtatgagaaccgtgaataacaataaatacatgggaaccatgaataaaaagttaattatggattatgagaaccttgaataaaaagttttggaaaaa 187  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  38202064 gattagtatgggaaccgtgaataacaataaatacatgggaaccgtgaataaaaagtgaattatcgattatgagaaccttgaataaaaagttttggaaaaa 38201965  T
Q  188 gagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcata 287  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  |||||||||||||||||||    
T  38201964 gagaatagacaagggcaaattaggaagaacatgaataattttacattgatattgcaaaacaacttataatttaggacaattttttttccaaaacgtcata 38201865  T
Q  288 cattgtgggacggagggagta 308  Q
    ||||||||||||| |||||||    
T  38201864 cattgtgggacggtgggagta 38201844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 29 - 309
Target Start/End: Original strand, 4756435 - 4756710
Alignment:
Q  29 acaatttgtggagagatatagtcaatagttaagttcagtctctaatttaatttaatgtggattagtatgagaaccgtgaataacaata---aatacatgg 125  Q
    ||||||||||||||||    ||||||||||||||||| | || ||||||||| ||||| ||||| |||| ||||| ||||||||||||   ||| |||||    
T  4756435 acaatttgtggagaga----gtcaatagttaagttcaatgtcaaatttaatt-aatgtagatta-tatgggaaccatgaataacaatagtaaatgcatgg 4756528  T
Q  126 gaaccatgaataaaaagttaat-tatggattatgagaaccttgaataaaaagttttggaaaaagagaatagacaagggtaaattaggaagaacatgaata 224  Q
    ||||| ||||||    || ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  4756529 gaaccgtgaata----gtgaatatattgattatgagaaccttgaataaaaagttttggaaaaagagaatggacaagggtaaattaggaagaacatgaaaa 4756624  T
Q  225 attttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| || | ||||||||||||||||||||||||    
T  4756625 attttacattgatattgcaaaacgacttataatttgggacaaatgttttttccaaagcgacttacattgtgggacggagggagtaa 4756710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 31023793 - 31023870
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| |||||||| |||||||||||||||  |||||||||||||| |||||| | ||||||| || |||||    
T  31023793 cattgatattgtaaaacgacatataatttgggacaattttttttccaaaacgacatacaatttgggacgaagagagta 31023870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 5653683 - 5653768
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagt 307  Q
    ||||||| ||||| ||||| |||||||| || ||||||||||||| |||||||| |||| | |||||| | |||||||||||||||    
T  5653683 taatttttcattggtattgtaaaacgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagt 5653768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 23825205 - 23825282
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || | |||| | ||||||||||||||||    
T  23825205 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacgtacaatttgggacggagggagta 23825282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 28121332 - 28121255
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||| ||||| |||||||||||||| |||||| | | ||||||||||||||    
T  28121332 cattggtattgtaaagcgacatataatttggaacaaatttttttccaaaacgacatacaatttaggacggagggagta 28121255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 39673701 - 39673780
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt--ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| |||||||||||||||  ||||  |||||||||| |||||| | ||||||||||||||||    
T  39673701 cattggtattgtaaaacgacatataatttgggacaattttttttttccaaaacgacatacaatttgggacggagggagta 39673780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 6920925 - 6921011
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  6920925 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 6921011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 13352529 - 13352451
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||||  | |||||| | ||||||||||||||||    
T  13352529 cattggtattgtaaagcgacatataatttgggacaaatattttttccaaagggacatacaatttgggacggagggagta 13352451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 31500730 - 31500808
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||| |||||| |||| | | |||||||||||||||||    
T  31500730 cattggtattgtaaagcgacatataatttgggacaattttttttctaaaacgacatataatttgggacggagggagtaa 31500808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 33488105 - 33488183
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  33488105 cattggtattgtaaaacgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 33488183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 38238952 - 38238866
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  38238952 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 38238866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 51417570 - 51417648
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| |||||||||||| |||  ||||||||||| || |||||| | ||||||||||||||||    
T  51417570 cattggtattgtaaaacgacatataatttgggataaattttttttccaaagcgacatacaatttgggacggagggagta 51417648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 30679359 - 30679271
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 310  Q
    ||||||| ||||| ||||| ||||| || || |||||| |||||| |||||||| |||  | |||||||| ||||||||||||||||||    
T  30679359 taatttttcattggtattgtaaaacaacatacaatttgagacaaatattttttctaaagtgacatacattttgggacggagggagtaaa 30679271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 39655431 - 39655352
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttt--tccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||| |||| |||||||| ||||||||||||||||||||||  || ||| || |||||| | |||||||||| |||||    
T  39655431 cattgacattgtaaaacgacatataatttgggacaaaatttttcctctaaagcgacatacaatttgggacggagagagta 39655352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 50324913 - 50324825
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 310  Q
    ||||||| ||||| ||||| ||| |||| || ||||||| ||||| |||||||| |||  | |||||||| ||||||||||||||||||    
T  50324913 taatttttcattggtattgtaaagcgacatacaatttggaacaaatattttttctaaagtgacatacattttgggacggagggagtaaa 50324825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 4226317 - 4226238
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||||||| |||  ||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  4226317 cattgatattgtaaagtgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 4226238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 34347357 - 34347274
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggaggga 305  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||||||    
T  34347357 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggaggga 34347274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 51905800 - 51905879
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||||||| ||||| |||||| |||| ||||||| || |||||| | |||||||||||||||||    
T  51905800 cattggtattgtaaagcgacttatcatttgtgacaaattttttttccaaagcgacatacaatttgggacggagggagtaa 51905879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 2733907 - 2733841
Alignment:
Q  243 aaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  2733907 aaaacgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 2733841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 6540667 - 6540745
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaa-aattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||||||||   |||||| |||| || |||||| | ||||||||||||||||    
T  6540667 cattgatattgtaaagcgacatataatttgggacaattttttttttcaaagcgacatacaatttgggacggagggagta 6540745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 18127420 - 18127334
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||  |||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  18127420 taattttttattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 18127334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 31045538 - 31045624
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||  | |||| | | ||||||||||||||||    
T  31045538 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacataaaatttgggacggagggagta 31045624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 32145439 - 32145353
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||  |||| ||||| ||| |||| || ||||||||||||| ||||||||||||  | |||||| | ||||||||||||||||    
T  32145439 taattttttattggtattgtaaagcgacatacaatttgggacaaatattttttccaaagtgacatacaatttgggacggagggagta 32145353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 35369597 - 35369675
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||| |||||||||| |||||  | ||||||||||||||||    
T  35369597 cattggtattgtaaagcgacatataatttgggacaatttttttttccaaaacgacatacgatttgggacggagggagta 35369675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 42219790 - 42219868
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | | ||||||||||||||    
T  42219790 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttaggacggagggagta 42219868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 83110 - 83187
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||| |||||  ||||||||||| || |||||| | | ||||||||||||||    
T  83110 cattggtattgtaaagcgacatataatttgagacaattttttttccaaagcgacatacaatttaggacggagggagta 83187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 26061865 - 26061910
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc 276  Q
    ||||||||||| |||||||| |||||||||||||||  ||||||||    
T  26061865 cattgatattgtaaaacgacatataatttgggacaattttttttcc 26061910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 52001212 - 52001257
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc 276  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||||||    
T  52001212 cattgatattgtaaagcgacatataatttgggacaaatttttttcc 52001257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 308
Target Start/End: Original strand, 52667061 - 52667094
Alignment:
Q  275 ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||||||||| ||||||||||||||||    
T  52667061 ccaaaacgtcatacattttgggacggagggagta 52667094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 7572508 - 7572587
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttt--tccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||||||||  |||||||| |||||| |||||  || ||| || |||||| | ||||||||||||||||    
T  7572508 cattgatattgtaaaacgacaaataatttgcgacaaatttttttctctaaagcgacatacaatttgggacggagggagta 7572587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 9264988 - 9265067
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| ||||||||||||||||  |||| ||  |||||| |||| ||  ||||||||||||||||    
T  9264988 cattgatattgtaaagcgacatataatttgggacaaatattttcccctaaaacgacatatatattgggacggagggagta 9265067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 15170268 - 15170347
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt--ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||  |||||||||||||||| ||||  ||||||| || |||||| | ||||||||||||||||    
T  15170268 cattggtattgtaaagcgaaatataatttgggacaaatttttttttccaaagcgacatacaatttgggacggagggagta 15170347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 16051851 - 16051930
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| || ||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  16051851 cattggtattgtaaagcgacatacaatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 16051930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 35379717 - 35379796
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttc--caaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||||  |||| || |||||| | ||||||||||||||||    
T  35379717 cattggtattgtaaagcgacatataatttgggacaattttttttcttcaaagcgacatacaatttgggacggagggagta 35379796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 4e-83; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 77 - 301
Target Start/End: Original strand, 21945274 - 21945498
Alignment:
Q  77 aatttaatgtggattagtatgagaaccgtgaataacaataaatacatgggaaccatgaataaaaagttaattatggattatgagaaccttgaataaaaag 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||       
T  21945274 aatttaatgtggattagtatgagaaccgtgaataacaataaatacatgagaaccgtgaataaaaagtgaattatggattatgagaaccttgaataaattt 21945373  T
Q  177 ttttggaaaaagagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaattttttcc 276  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |     ||||||||    
T  21945374 ttttggaaaaagagaatagaagagggcaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgacaattttttttttcc 21945473  T
Q  277 aaaacgtcatacattgtgggacgga 301  Q
    ||||||||||||||||| |||||||    
T  21945474 aaaacgtcatacattgtaggacgga 21945498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 31466126 - 31466048
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||||||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  31466126 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 31466048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 36669731 - 36669809
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||| |||||||||| |||||| | ||||||||||||||||    
T  36669731 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 36669809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 36916752 - 36916665
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||||||||| ||| ||| ||||||||||||||||| |||||||  |||| | |||||| | | |||||||||||||||    
T  36916752 taatttttcattgatattgtaaagcgatttataatttgggacaaatattttttttaaaatgacatacaatttaggacggagggagtaa 36916665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 48339518 - 48339447
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| |||||||| |||||||||||||||  ||||||||||| || |||||| | ||||||| ||||||||    
T  48339518 tattgtaaaacgacatataatttgggacaattttttttccaaagcgacatacaatttgggacgaagggagta 48339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 13439403 - 13439317
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  13439403 taatttttcattggtattgtaaagcgacgtataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 13439317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 28536956 - 28537042
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| ||||||||| |||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  28536956 taatttttcattggtattgtaaagcgacatataatttgagacaaatattttttctaaaatgacatacaatttgggacggagggagta 28537042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 31502886 - 31502808
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||| | ||| || |||||| | ||||||||||||||||    
T  31502886 cattgatattgtaaagcgacatataatttgggacaaatatttttcctaaagcgacatacaatttgggacggagggagta 31502808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 44894769 - 44894855
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  44894769 taatttttcattgatattgtaaagcgacatataatttgtgacaaatattttttctaaagtgacatacaatttgggacggagggagta 44894855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 47578875 - 47578961
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| |||||||| || |||||||||||||  |||||| |||  | |||||| | |||||||||||||||||    
T  47578875 taatttttcattggtattgtaaaacgacatacaatttgggacaaatatttttctaaagtgacatacaatttgggacggagggagtaa 47578961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 22369582 - 22369503
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||| ||||||||||||  ||| || |||||| | ||||||||||||||||    
T  22369582 cattggtattgtaaagcgacatataatttgggagaaaattttttccctaaagcgacatacaatttgggacggagggagta 22369503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 6882926 - 6882839
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  |  ||||| | |||||||||||||||||    
T  6882926 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgatatacaatttgggacggagggagtaa 6882839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 10453102 - 10453189
Alignment:
Q  222 ataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||| ||||| ||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  10453102 ataatttttcattggtattgtaaagcgacgtataatttgagacaaatattttttctaaagtgacatacaatttgggacggagggagta 10453189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 4513555 - 4513641
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||  ||||| |||||||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  4513555 taatttttcattagtattgtaaaacgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 4513641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 8611899 - 8611813
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||| ||||    
T  8611899 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggaggaagta 8611813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 11910627 - 11910713
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| |||||| | |||||||||||||||| |||||||| |||  | |||||| | |||||||| |||||||    
T  11910627 taatttttcattggtattgtaaaacggcatataatttgggacaaatattttttctaaagtgacatacaatttgggacggggggagta 11910713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 23059156 - 23059070
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||  |||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  23059156 taattttttattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 23059070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 28703621 - 28703543
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  28703621 cattggtattgtaaagcgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 28703543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 29410289 - 29410367
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||| ||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||| ||||||    
T  29410289 cattggtattgtaaaatgacatataatttgggacaaatttttttcctaaagcgacatacaatttgggacggaaggagta 29410367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 29985965 - 29986051
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| || ||||| ||||||| ||||||| ||||  | |||||| | ||||||||||||||||    
T  29985965 taatttttcattgatattgtaaagcgacatacaatttaggacaaatatttttttcaaagtggcatacaatttgggacggagggagta 29986051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 30264505 - 30264427
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttcc-aaaacgtcatacattgtgggacggagggagt 307  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||| ||| || |||||| | |||||||||||||||    
T  30264505 cattggtattgtaaagcgacatataatttgggacaaatattttttcctaaagcgacatacaatttgggacggagggagt 30264427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 30803362 - 30803288
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggaggg 304  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||    
T  30803362 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggaggg 30803288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 32466362 - 32466428
Alignment:
Q  232 attgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggac 298  Q
    |||| ||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | ||||||    
T  32466362 attggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggac 32466428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 35144282 - 35144368
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||| |||||    
T  35144282 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagagagta 35144368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 40536984 - 40537062
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||| | | ||||||||||||||||    
T  40536984 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatataatttgggacggagggagta 40537062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 44481072 - 44480986
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  44481072 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 44480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 46373198 - 46373284
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  46373198 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 46373284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 47834347 - 47834433
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | || || ||||||||||    
T  47834347 taatttttcattgatattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgagatggagggagta 47834433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 10316635 - 10316551
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggaggga 305  Q
    |||| |||||||| ||||| |||||||  |||||||||||||||  ||||||||  ||| || |||||| | |||||||||||||    
T  10316635 taatgttacattggtattgtaaaacgaaatataatttgggacaagtttttttccttaaagcgacatacaatttgggacggaggga 10316551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 17611508 - 17611585
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| || |||||| | |||||| ||| |||||    
T  17611508 cattggtattgtaaagcgacatataatttgggacaattttttttccaaagcgacatacaatttgggacagagagagta 17611585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 23709637 - 23709560
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||| || ||  ||||||||||| || |||||| | ||||||||||||||||    
T  23709637 cattggtattgtaaagcgacatataatttgagataattttttttccaaagcgacatacaatttgggacggagggagta 23709560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 22326729 - 22326808
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||| ||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  22326729 cattggtattgtaaagcgacatataatttggaacaaatttttttccctaaagcgacatacaatttgggacggagggagta 22326808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 22918412 - 22918452
Alignment:
Q  274 tccaaaacgtcatacattgtgggacggagggagtaaaatga 314  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  22918412 tccaaaacgtcatacaatttgggacggagggagtaatatga 22918452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 23726406 - 23726370
Alignment:
Q  275 ccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||||||||||| | |||||||||||||||||||    
T  23726406 ccaaaacgtcatacaatttgggacggagggagtaaaa 23726370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 27059748 - 27059820
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | |||||||| |||||||    
T  27059748 tattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggtgggagta 27059820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 30643239 - 30643286
Alignment:
Q  233 ttgatattgcaaaacgacttataatttgggacaaaattttttccaaaac 281  Q
    ||||||||| |||| |||||| ||||||||||||| |||||||||||||    
T  30643239 ttgatattgtaaaatgactta-aatttgggacaaacttttttccaaaac 30643286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 32467879 - 32467807
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||| |||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  32467879 tattgtaaagcgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 32467807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 38074752 - 38074788
Alignment:
Q  275 ccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||||||||||| | |||||||||||||||||||    
T  38074752 ccaaaacgtcatacaatttgggacggagggagtaaaa 38074788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 43884156 - 43884120
Alignment:
Q  275 ccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||||||||||| | |||||||||||||||||||    
T  43884156 ccaaaacgtcatacaatttgggacggagggagtaaaa 43884120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 3e-71; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 29 - 308
Target Start/End: Original strand, 53536709 - 53536983
Alignment:
Q  29 acaatttgtggagagatatagtcaatagttaagttcagtctctaatttaatttaatgtggattagtatgagaaccgtgaataacaata---aatacatgg 125  Q
    ||||||||||||||||    ||||||||||||||||| | || ||||||||| ||||| ||||| |||| ||||||||||||||||||   ||| |||||    
T  53536709 acaatttgtggagaga----gtcaatagttaagttcaatgtcaaatttaatt-aatgtagatta-tatgggaaccgtgaataacaatagtaaatgcatgg 53536802  T
Q  126 gaaccatgaataaaaagttaat-tatggattatgagaaccttgaataaaaagttttggaaaaagagaatagacaagggtaaattaggaagaacatgaata 224  Q
    ||||| ||||||    || ||| ||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  53536803 gaaccgtgaata----gtgaatatattgattatgagaaccttgaataaaaagttttggaaaaagagaatggaaaagggtaaattaggaagaacatgaata 53536898  T
Q  225 attttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| || | ||| |||||||||||||||||||    
T  53536899 attttacattgatattgcaaaacgacttataatttgagacaaatgttttttccaaagcgacttaccttgtgggacggagggagta 53536983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 94 - 257
Target Start/End: Original strand, 53533245 - 53533408
Alignment:
Q  94 tatgagaaccgtgaataacaata---aatacatgggaaccatgaataaaaagttaat-tatggattatgagaaccttgaataaaaagttttggaaaaaga 189  Q
    |||| ||||||||||||||||||   ||| |||||||||| ||||||    || ||| ||| ||||||||||||||||||||||||||||||||||||||    
T  53533245 tatgggaaccgtgaataacaatagtaaatgcatgggaaccgtgaata----gtgaatatattgattatgagaaccttgaataaaaagttttggaaaaaga 53533340  T
Q  190 gaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataat 257  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  53533341 gaatggacaagggtaaattaggaagaacatgaacaattttacattgatattgcaaaacgacttataat 53533408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 40710708 - 40710794
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||| |||||||||||||| ||| |||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||    
T  40710708 taatgttacattgatattgtaaagcgacatataatttgggacaaatattttttctaaagcgacatacaatttgggacggagggagta 40710794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 8724357 - 8724279
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  8724357 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 8724279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 9076244 - 9076166
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  9076244 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 9076166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 41751187 - 41751101
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  41751187 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 41751101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 32078097 - 32078017
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaa--ttttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| |||||||| ||||||||||||||||   |||||| ||||||| |||||| | |||||||||||||||||    
T  32078097 cattggtattgtaaaacgacatataatttgggacaaatattttttttcaaaacgacatacaatttgggacggagggagtaa 32078017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 39259336 - 39259257
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||||| |||||    
T  39259336 cattgatattgtaaagcgacatataatttgggacaaatttttttcctaaagcgacatacaatttgggacggaggaagtaa 39259257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 222 - 308
Target Start/End: Complemental strand, 43599657 - 43599570
Alignment:
Q  222 ataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  43599657 ataatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 43599570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 45824080 - 45824167
Alignment:
Q  222 ataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  45824080 ataatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 45824167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 22926114 - 22926036
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| ||||||||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  22926114 cattggtattgtaaagcgacttataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 22926036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 23609429 - 23609515
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||    
T  23609429 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagcgacatacaatttgggacggagggagta 23609515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 25904104 - 25904190
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  25904104 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 25904190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 34663516 - 34663430
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  34663516 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 34663430  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 35084533 - 35084619
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||| | ||| |||| |||||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  35084533 taatttttcattggtatcgtaaagcgacatataatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 35084619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 38783637 - 38783723
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  38783637 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 38783723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 43185422 - 43185344
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| ||||| || |||||| | ||||||||||||||||    
T  43185422 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 43185344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 52040445 - 52040531
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||||| ||||||||||||||||    
T  52040445 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacattttgggacggagggagta 52040531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 52870641 - 52870719
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  52870641 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 52870719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 9794550 - 9794474
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  9794550 cattggtattgtaaagcgacatataatttgggacaat-ttttttccaaagcgacatacaatttgggacggagggagta 9794474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 3348986 - 3349030
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttc 275  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||    
T  3348986 cattgatattgtaaaacgacttataatttaggacaaatttttttc 3349030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 24089414 - 24089327
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| ||| |||| |||||||| ||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  24089414 taatttttcattggtattgtaaagcgacatataatttcggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 24089327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 3645901 - 3645987
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| |||||||| ||||||| |||||||| |||  | |||||| | ||||||||| ||||||    
T  3645901 taatttttcattgatattgtaaagcgacatataatttaggacaaatattttttctaaagtgacatacaatttgggacggaaggagta 3645987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 19961021 - 19961107
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| |||||||| || |||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  19961021 taatttttcattggtattgtaaaacgacatacaatttgtgacaaatattttttctaaagtgacatacaatttgggacggagggagta 19961107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 29652071 - 29651993
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||| ||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  29652071 cattgatattgtaaagcgacatataatttggaacaaatattttttctaaagtgacatacaatttgggacggagggagta 29651993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 30190409 - 30190323
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| |||||||| |||  | |||||| | || |||||| ||||||    
T  30190409 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttctaaagtgacatacaatttgagacggatggagta 30190323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 34817108 - 34817186
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaa-aattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| |||||||||||||||   |||||||||||  | |||||| | ||||||||||||||||    
T  34817108 cattggtattgtaaaacgacatataatttgggacaatttttttttccaaagtgacatacaatttgggacggagggagta 34817186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 39290614 - 39290536
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||| ||||||| |||||||||||| ||  ||||| | ||||||||||||||||    
T  39290614 cattggtattgtaaagcgacatataatttaggacaaatattttttccaaagcgagatacaatttgggacggagggagta 39290536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 308
Target Start/End: Complemental strand, 41979962 - 41979876
Alignment:
Q  222 ataattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||| ||||| ||||| ||| |||| |||||||| ||||||| ||||||| |||  | | |||| | ||||||||||||||||    
T  41979962 ataatttttcattggtattgtaaagcgacatataatttaggacaaatttttttctaaagtgacgtacaatttgggacggagggagta 41979876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 45347203 - 45347283
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa---attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| |||||||| |||||||||||| |||    |||||||||||||| | | || | ||||||||||||||||    
T  45347203 cattgatattgtaaaacgacgtataatttgggataaatattttttttccaaaacgacgttcaatttgggacggagggagta 45347283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 47109266 - 47109344
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  |||||| |||| || |||||| | ||||||||||||||||    
T  47109266 cattggtattgtaaagcgacatataatttgggacaaatttttttttcaaagcgacatacaatttgggacggagggagta 47109344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 47498108 - 47498186
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||  |||||||||||||||  |||| |||||||||| |||||| | ||||||||||||||||    
T  47498108 cattggtattgtaaagcgatatataatttgggacaatttttttttccaaaacgacatacaatttgggacggagggagta 47498186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 48333796 - 48333710
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| | || |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  48333796 taatttttcattggtattgtaaagcaacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 48333710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 52060467 - 52060553
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  52060467 taatttttcattggtattgtaaagcgacatataatttgagacaaatattttttctaaagtgacatacaatttgggacggagggagta 52060553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 54747903 - 54747989
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||| ||||||    
T  54747903 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggaaggagta 54747989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 38808165 - 38808089
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaa--aattttttccaaaacgtcatacattgtgggacggaggga 305  Q
    ||||| ||||| |||||||| |||||||||||||||    ||||||||||||||  ||||| | |||||||||||||    
T  38808165 cattggtattgtaaaacgacatataatttgggacaattttttttttccaaaacgatatacaatttgggacggaggga 38808089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 308
Target Start/End: Complemental strand, 41265588 - 41265511
Alignment:
Q  232 attgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||| ||||| ||||| || ||||||||||||||||  |||||||||||  | |||||| | ||||||||||||||||    
T  41265588 attggtattgtaaaacaacatataatttgggacaaattttttttccaaagggacatacaatttgggacggagggagta 41265511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 49102511 - 49102436
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt---ttccaaaacgtcatacattgtgggacggagg 303  Q
    ||||||||||| |||||||  |||||||||||||||  ||||   |||||||||| |||||| | |||||||||||    
T  49102511 cattgatattgtaaaacgatatataatttgggacaattttttttcttccaaaacgacatacaatttgggacggagg 49102436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 51380233 - 51380306
Alignment:
Q  236 atattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||| ||||||    
T  51380233 atattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggaaggagta 51380306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 43185595 - 43185631
Alignment:
Q  275 ccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||||||||||| | |||||||||||||||||||    
T  43185595 ccaaaacgtcatacaatttgggacggagggagtaaaa 43185631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 43600946 - 43600867
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||| ||||    
T  43600946 cattggtattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggaggaagta 43600867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 51571830 - 51571751
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | | ||||||||||||||    
T  51571830 cattggtattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttaggacggagggagta 51571751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 53533634 - 53533686
Alignment:
Q  257 tttgggacaaaa-ttttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||||||  ||||||||||| || | |||||||||||||||||||||||    
T  53533634 tttgggacaaatgttttttccaaagcgacttacattgtgggacggagggagta 53533686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 2e-57; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 152 - 308
Target Start/End: Original strand, 42919021 - 42919178
Alignment:
Q  152 gattatgagaaccttgaataaaaagttttggaaaaagagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgact 251  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42919021 gattatgagaaccttgaataaaaagttttggaaaaagagaatggacaagggcaaattagaaagaacatgaataattttacattgatattgcaaaacgact 42919120  T
Q  252 tataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||| |||||||  ||||||||||| || | || ||||||||||||||||||||    
T  42919121 tataatttaggacaaatgttttttccaaagcgacttatattgtgggacggagggagta 42919178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 15225917 - 15225840
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||||||||| || |||||| | ||||||||||||||||    
T  15225917 cattggtattgtaaaacgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacggagggagta 15225840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 12988185 - 12988265
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| |||||||||||||||||||||||||  |||||| |||||| | |||||||||||||||||    
T  12988185 cattggtattgtaaagcgacatataatttgggacaaaattttttccctaaaacgacatacaatttgggacggagggagtaa 12988265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 31692811 - 31692734
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | ||||||||||||||||    
T  31692811 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacggagggagta 31692734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 45439598 - 45439513
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||| |||||||| ||||| |||||||| |||||||||| ||||| |||||||| || || |||||| | ||||||||||||||||    
T  45439598 taatattacattggtattgtaaaacgacatataatttggaacaaatttttttccgaagcgacatacaatttgggacggagggagta 45439513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 2099167 - 2099249
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaat 312  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||||| |||| | |||||| | ||||||||| ||||||||||    
T  2099167 cattgatattgtaaagcgacatataatttgggacaaatattttttctaaaatgacatacaatttgggacggaaggagtaaaat 2099249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 7427365 - 7427454
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||||| |||||||||||||||||||    
T  7427365 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacattttgggacggagggagtaaaa 7427454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 43564662 - 43564593
Alignment:
Q  232 attgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacgga 301  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | |||||||||    
T  43564662 attgatattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacgga 43564593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 31602917 - 31602996
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  31602917 cattggtattgtaaaacgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 31602996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 39628920 - 39628841
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  39628920 cattgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 39628841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 39638470 - 39638391
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  39638470 cattgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 39638391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 9267998 - 9268084
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  9267998 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacagtttgggacggagggagta 9268084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 26805028 - 26805106
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||||| ||| ||||| || |||||| |||||| | ||||||||||||||||    
T  26805028 cattgatattgtaaagcgacatataatttgggataaattttttccctaaaacgacatacaatttgggacggagggagta 26805106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 29938376 - 29938290
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| |||||||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  29938376 taatttttcattggtattgtaaaacgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 29938290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 31873615 - 31873701
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  31873615 taatttttcattggtattgtaaagcgacgtataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 31873701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 32395232 - 32395318
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| || ||||| ||||||| |||||||| |||  | |||||||| ||||||||||||||||    
T  32395232 taatttttcattgatattgtaaagcgacatacaatttaggacaaatattttttctaaagtgacatacattttgggacggagggagta 32395318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 5831028 - 5830941
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  5831028 taatttttcattggtattgtaaagcgacataaaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 5830941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 6878598 - 6878511
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| |||||||| || |||||||||||||  ||||||| |||  | |||||| | |||||||||||||||||    
T  6878598 taatttttcattggtattgtaaaacgacatacaatttgggacaaatgttttttctaaagtgacatacaatttgggacggagggagtaa 6878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 24422505 - 24422592
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||| | | |||||||||||||||||    
T  24422505 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatataatttgggacggagggagtaa 24422592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 28849034 - 28848959
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggaggga 305  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | |||||||||||||    
T  28849034 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggaggga 28848959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 30087923 - 30088010
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | | |||| | |||||||||||||||||    
T  30087923 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacgtacaatttgggacggagggagtaa 30088010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 30526243 - 30526156
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||| | | |||||||||||||||    
T  30526243 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacaatttaggacggagggagtaa 30526156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 1953350 - 1953272
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||||||  ||||| | |||||| |||||||||    
T  1953350 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgatatacaatttgggacagagggagta 1953272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 11714524 - 11714438
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||| ||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  11714524 taatttttcattggtattgtaaagcgacatacaatttaggacaaatattttttctaaaatgacatacaatttgggacggagggagta 11714438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 14433344 - 14433430
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| || || ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  14433344 taatttttcactggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 14433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 16861952 - 16862030
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| |  |||||| | ||||||||||||||||    
T  16861952 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcaacatacaatttgggacggagggagta 16862030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 29342784 - 29342706
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| | ||| || |||||| | ||||||||||||||||    
T  29342784 cattggtattgtaaagcgacatataatttgggacaaatatttttcctaaagcgacatacaatttgggacggagggagta 29342706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 29440942 - 29440864
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| || ||||| ||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  29440942 cattggtattgtaaagcgacatacaatttaggacaaattttttttccaaaacgacatacaatttgggacggagggagta 29440864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 31231070 - 31231156
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | | ||||||||||||||    
T  31231070 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaattttggacggagggagta 31231156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 35544188 - 35544274
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  35544188 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 35544274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 38044992 - 38044914
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||| ||||||| |||||| |||||||| |||||| | | ||||||||||||||    
T  38044992 cattggtattgtaaagcgacatataatttaggacaaattttttttccaaaacgacatacaatttaggacggagggagta 38044914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 38194670 - 38194748
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||| ||||||| |||| ||||||| || |||||| | ||||||||||||||||    
T  38194670 cattggtattgtaaagcgacatataatttaggacaaattttttttccaaagcgacatacaatttgggacggagggagta 38194748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 41256404 - 41256482
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| |||||||| ||||||| |||| |||||||||| |||||| | | ||||||| ||||||    
T  41256404 cattggtattgtaaaacgacatataatttaggacaaattttttttccaaaacgacatacaatttaggacggatggagta 41256482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 899558 - 899639
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagg 303  Q
    ||||||| ||||| || || |||||||| |||||||||||||||| |||||||| ||| || |||||| | | |||||||||    
T  899558 taatttttcattggtactgtaaaacgacatataatttgggacaaatattttttctaaagcgacatacaatttaggacggagg 899639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 308
Target Start/End: Complemental strand, 16861779 - 16861746
Alignment:
Q  275 ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||||||||| ||||||||||||||||    
T  16861779 ccaaaacgtcatacattttgggacggagggagta 16861746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 26513766 - 26513689
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||  ||| |||||||||||||||| |||||| |||| || |||||| | | ||||||||||||||    
T  26513766 cattggtattgtaaagtgacatataatttgggacaaattttttttcaaagcgacatacaatttaggacggagggagta 26513689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 28868799 - 28868722
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| | |||   |||||| | ||||||||||||||||    
T  28868799 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcacatacaatttgggacggagggagta 28868722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 31230510 - 31230473
Alignment:
Q  274 tccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    |||||||||||||||| | |||||||||||||||||||    
T  31230510 tccaaaacgtcatacaatttgggacggagggagtaaaa 31230473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 311
Target Start/End: Complemental strand, 35631105 - 35631024
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||||||  |||  ||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||||    
T  35631105 cattgatattctaaagtgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaaaa 35631024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 543604 - 543568
Alignment:
Q  274 tccaaaacgtcatacattgtgggacggagggagtaaa 310  Q
    |||||||||||||||| | ||||||||||||||||||    
T  543604 tccaaaacgtcatacaatttgggacggagggagtaaa 543568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 11181321 - 11181242
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||| | ||| |||| |||||||||||||||  |||||| |  |||||| |||||| | ||||||||||||||||    
T  11181321 cattgatatcgtaaagcgacatataatttgggacaatttttttttcctaaaacgacatacaatttgggacggagggagta 11181242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 18526405 - 18526333
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||| |||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  18526405 tattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 18526333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 26394023 - 26394102
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||| |||| ||  ||| || |||||| | ||||||||||||||||    
T  26394023 cattggtattgtaaagcgacatataatttgggacaaaaattttcccctaaagcgacatacaatttgggacggagggagta 26394102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 39284282 - 39284194
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 310  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||| ||| |||||||| |||  | |||||| | ||||||||||||||||||    
T  39284282 taatttttcattggtattgtaaagcgacatacaatttgggataaatattttttctaaagtgacatacaatttgggacggagggagtaaa 39284194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 1e-55; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 317 - 469
Target Start/End: Original strand, 23973362 - 23973516
Alignment:
Q  317 caacagtgtaatgaaac-gggtaaaaaagtgagagtgtggtaaaaaactcaggattctcccatttcaaattttattaccacgttacccttcaataaagcg 415  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |    
T  23973362 caacagtgtaatgaaaaagggtaaaaaagtgagagtgcggtaaaaaactcagggttctcccatttcaaattttattaccacattacccttcaataaagtg 23973461  T
Q  416 aaattaaagtgcagttaaaaaa-gtagaagcagggacagttgtgccattttgaca 469  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  23973462 aaattaaagtgtagttaaaaaaggtagaagcagggacagttgtgcaattttgaca 23973516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 521 - 607
Target Start/End: Original strand, 23973608 - 23973694
Alignment:
Q  521 ttaaaatacctcaaacattttgcccgttacatacatttgtacacacacaattcaaagctgacagacacacactttctatttcatctc 607  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23973608 ttaaaatacctcaaacattttgcccgttacatacattcgtacacacacaatttaaagctgacagacacacactttctatttcatctc 23973694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 40483605 - 40483676
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| |||||||| |||||||||||||||| ||||||||||| || | |||| | ||||||||||||||||    
T  40483605 tattgtaaaacgacatataatttgggacaaatttttttccaaagcgacgtacaatttgggacggagggagta 40483676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 37985601 - 37985524
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||| ||||||| ||||||||||| || |||||| | ||||||||||||||||    
T  37985601 cattggtattgtaaagcgacatataatttaggacaaatttttttccaaagcgacatacaatttgggacggagggagta 37985524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 310
Target Start/End: Complemental strand, 30780142 - 30780054
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 310  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||| |||||||  |||  | |||||| | ||||||||||||||||||    
T  30780142 taatttttcattgatattgtaaagcgacatataatttgggacaaatattttttgtaaagtgacatacaatttgggacggagggagtaaa 30780054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 311
Target Start/End: Complemental strand, 43446611 - 43446531
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||| ||||| ||| |||| ||||||||| |||||| ||||||||||| || |||||| | || ||||||||||||||||    
T  43446611 cattggtattgtaaagcgacatataatttgagacaaatttttttccaaagcgacatacaatttgagacggagggagtaaaa 43446531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 274
Target Start/End: Complemental strand, 28248535 - 28248492
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt 274  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  28248535 cattgatattgtaaaacgacatataatttgggacaaaatttttt 28248492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 38959813 - 38959734
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| ||||| || |||||| | |||||||||||||||||    
T  38959813 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagtaa 38959734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 325327 - 325413
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  325327 taatttttcattgatattgtaaagcgacatataatttgagacaaatattttttctaaagtgacatacaatttgggacggagggagta 325413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 5421511 - 5421433
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| || ||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  5421511 cattggtattgtaaaacgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 5421433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 14309108 - 14309186
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  14309108 cattggtattgtaaaacgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 14309186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 22154216 - 22154294
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  22154216 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 22154294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 506
Target Start/End: Original strand, 23973550 - 23973592
Alignment:
Q  464 ttgacaacggaaagtataataagaaattaaaatatctattgtc 506  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  23973550 ttgacaacggaaagtataataagaaattaaaataccttttgtc 23973592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 27863004 - 27863082
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  27863004 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 27863082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 43521597 - 43521675
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| |||||||| ||||||  ||||||||||| || |||||| | |||||||||||||||||    
T  43521597 cattggtattgtaaagcgacatataatttaggacaattttttttccaaagcgacatacaatttgggacggagggagtaa 43521675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 14780906 - 14780979
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggaggg 304  Q
    ||||| ||||| |||  ||| |||||||||||||||| |||||||||||||| |||||| | ||||| ||||||    
T  14780906 cattggtattgtaaagggacatataatttgggacaaatttttttccaaaacgacatacaatttgggatggaggg 14780979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 40649129 - 40649052
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| || ||||||||||||  ||||||||||| || |||||| | || |||||||||||||    
T  40649129 cattggtattgtaaaacgacatacaatttgggacaattttttttccaaagcgacatacaatttgagacggagggagta 40649052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 3873614 - 3873696
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||| ||||| ||| |||| ||||||||||||||||  |||||||  ||| || |||||| | |||||||||||||||||||    
T  3873614 cattggtattgtaaagcgacatataatttgggacaaatatttttccctaaagcgacatacaatttgggacggagggagtaaaa 3873696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 28786919 - 28787006
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    |||||||  |||||||||| ||| |||| |||||||| ||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  28786919 taattttttattgatattgtaaagcgacatataatttaggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 28787006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 32068419 - 32068501
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaa--ttttttccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||| ||||| ||| |||| |||||||| ||||||||  |||||| |||| || |||||| | |||||||||||||||||||    
T  32068419 cattggtattgtaaagcgacatataattttggacaaaatttttttttcaaagcgacatacaatttgggacggagggagtaaaa 32068501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 7491649 - 7491735
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||  |||| ||||| ||| |||| |||||||||||||| | |||||||| |||| | |||||| | ||||||||||||||||    
T  7491649 taattttttattggtattgtaaagcgacatataatttgggacacatattttttctaaaatgacatacaatttgggacggagggagta 7491735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 11216670 - 11216592
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  11216670 cattggtattgtaaagcgacgtataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 11216592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 16198470 - 16198392
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||| ||| |||||| ||||| || |||||| | ||||||||||||||||    
T  16198470 cattggtattgtaaagcgacatataatttgggataaattttttttccaaagcgacatacaatttgggacggagggagta 16198392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 19576132 - 19576046
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||| | |||||| | |  |||||||||||||    
T  19576132 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaaatgacatacaatttaagacggagggagta 19576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 23498099 - 23498037
Alignment:
Q  247 cgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    |||| |||||||||||||||| |||||||| |||  | |||||||| ||||||||||||||||    
T  23498099 cgacatataatttgggacaaatattttttctaaagtgacatacattttgggacggagggagta 23498037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 30549773 - 30549851
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||| ||||  |||| |||||||||| |||||| |  |||||||||||||||    
T  30549773 cattgatattgtaaagcgacatataatttggaacaatttttttttccaaaacgacatacaattggggacggagggagta 30549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 37111205 - 37111283
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| |||||||| | ||||||| |||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  37111205 cattgatattgtaaaacgacatgtaatttgagacaattttttttcccaaagcgacatacaatttgggacggagggagta 37111283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 1666962 - 1667042
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| || | |||||||||||||||| ||||||||  ||| || |||||| | |||||||||||||||||    
T  1666962 cattggtattgtaaagcggcatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagtaa 1667042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 311
Target Start/End: Complemental strand, 34504419 - 34504338
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||| ||||| ||| |||| |||||||| ||||||| |||||| ||||| || |||||| | || ||||||||||||||||    
T  34504419 cattggtattgtaaagcgacatataatttaggacaaattttttttccaaagcgacatacaatttgagacggagggagtaaaa 34504338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 36845896 - 36845820
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||| ||||| || |||||| | ||||||||||||||||    
T  36845896 cattggtattgtaaagcgacatataatttgggacaat-tttttcccaaagcgacatacaatttgggacggagggagta 36845820  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 40425188 - 40425248
Alignment:
Q  255 aatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaaaatg 313  Q
    ||||||||||||| ||||||||  ||| || |||||| | |||||||||||||||||||||    
T  40425188 aatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagtaaaatg 40425248  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 3376463 - 3376427
Alignment:
Q  275 ccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    ||||||||||||||| | |||||||||||||||||||    
T  3376463 ccaaaacgtcatacaatttgggacggagggagtaaaa 3376427  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 8444207 - 8444279
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaaatt-ttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||| |||| |||||||||||||||| || ||||||||| |  |||||| | ||||||||||||||||    
T  8444207 tattgtaaagcgacatataatttgggacaaatttattttccaaagcaacatacaatttgggacggagggagta 8444279  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 19505842 - 19505906
Alignment:
Q  237 tattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacgga 301  Q
    ||||| |||||||| || ||||||||||||| |||||| |||| || |||||| | |||||||||    
T  19505842 tattgtaaaacgacatacaatttgggacaaattttttttcaaagcgacatacaatttgggacgga 19505906  T

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Target: scaffold0014 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 312 - 459
Target Start/End: Complemental strand, 125715 - 125567
Alignment:
Q  312 tgaatcaacagtgtaatgaaacgggtaaaaaagtgagagtgtggtaaaaaa-ctcaggattctcccatttcaaattttattaccacgttacccttcaata 410  Q
    |||||||| |||||||||||| || || ||| || | |||||||||||||| |||||| |||| ||||||||||||||||||||| |||| |||||||||    
T  125715 tgaatcaatagtgtaatgaaaaggttagaaatgtcacagtgtggtaaaaaaactcagggttcttccatttcaaattttattaccatgttatccttcaata 125616  T
Q  411 aagcgaaattaaagtgcagttaaaaaagtagaagcagggacagttgtgc 459  Q
    ||| ||| ||| |||||||||||||| ||||||||||||||||||||||    
T  125615 aagtgaacttacagtgcagttaaaaatgtagaagcagggacagttgtgc 125567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 5e-30; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 307 - 458
Target Start/End: Complemental strand, 16208074 - 16207923
Alignment:
Q  307 taaaatgaatcaacagtgtaatgaaacgggtaaaaaagtgagagtgtggtaaaaaactcaggattctcccatttcaaattttattaccacgttacccttc 406  Q
    |||| |||||||||| |||||| ||  ||||| |||||| ||||||||||||||||||||||| |||||||||| ||| ||| ||||||  |||||||||    
T  16208074 taaattgaatcaacaatgtaataaagagggtagaaaagtcagagtgtggtaaaaaactcaggagtctcccatttgaaaatttgttaccatcttacccttc 16207975  T
Q  407 aataaagcgaaattaaagtgcagttaaaaaagtagaagcagggacagttgtg 458  Q
    ||||||| |||| || ||||||||||||||  |||  ||| |||||||||||    
T  16207974 aataaagtgaaaatagagtgcagttaaaaatttagtggcatggacagttgtg 16207923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 9961401 - 9961314
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  9961401 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 9961314  T

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Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 34283421 - 34283343
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||||||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  34283421 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 34283343  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 2010272 - 2010350
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttt-tccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| | || |||||||||||||||||||||| |||||| || |||||| | ||||||||||||||||    
T  2010272 cattggtattgtaaagcaacatataatttgggacaaaatttttctccaaagcgacatacaatttgggacggagggagta 2010350  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 10629520 - 10629598
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  10629520 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 10629598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 16524721 - 16524799
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  16524721 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 16524799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 31022590 - 31022672
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaaaatg 313  Q
    ||||| ||||| ||| |||| |||||||| ||||||| ||||||||||| || |||||| | | |||||||||||||| ||||    
T  31022590 cattggtattgtaaagcgacatataatttaggacaaatttttttccaaagcgacatacaatttaggacggagggagtataatg 31022672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 31949336 - 31949422
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| |||||||| || ||||||||||||| |||||||| |||  | |||||||| |||||||||| |||||    
T  31949336 taatttttcattggtattgtaaaacgacatacaatttgggacaaatattttttctaaagtgacatacattttgggacggagagagta 31949422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 32142461 - 32142375
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  32142461 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 32142375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 29344038 - 29343975
Alignment:
Q  247 cgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    |||| |||||||||||||||| ||||||||  |||||| |||||| | ||||||||||||||||    
T  29344038 cgacatataatttgggacaaatttttttccttaaaacgacatacaatttgggacggagggagta 29343975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 11172971 - 11172884
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  11172971 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 11172884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 12058646 - 12058567
Alignment:
Q  232 attgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 310  Q
    |||| ||||| ||| |||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||||||| ||||    
T  12058646 attggtattgtaaagcgacatataatttgggacaaatattttttctaaagcgacatacaatttgggacggagggattaaa 12058567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 8201546 - 8201460
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  8201546 taatttttcattggtattgtaaagcgacatataatttgagacaaatattttttctaaagtgacatacaatttgggacggagggagta 8201460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 16466365 - 16466443
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaa-aattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| ||||||||||||||||||||   ||||||||||| || |||||| | | ||||||||||||||    
T  16466365 cattggtattgtaaagcgacttataatttgggacaatttttttttccaaagcggcatacaatttaggacggagggagta 16466443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 4130930 - 4130853
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| |||||||| || ||||||||||||| |||||| |||| || |||||| | |||||| ||| |||||    
T  4130930 cattggtattgtaaaacgacatacaatttgggacaaattttttttcaaagcgacatacaatttgggacagagagagta 4130853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 6612625 - 6612662
Alignment:
Q  274 tccaaaacgtcatacattgtgggacggagggagtaaaa 311  Q
    |||||||||||||||| | |||||||||||||||||||    
T  6612625 tccaaaacgtcatacaatttgggacggagggagtaaaa 6612662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 24053149 - 24053226
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||| ||  |||||| |||| || |||||| | ||||||||||||||||    
T  24053149 cattggtattgtaaagcgacatataatttgggataatttttttttcaaagcgacatacaatttgggacggagggagta 24053226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 9461660 - 9461573
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaa--aattttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||  | ||||||| |||  | |||||| | ||||||||||||||||    
T  9461660 taatttttcattgttattgtaaagcgacatataatttgggacaaatatttttttctaaagtgacatacaatttgggacggagggagta 9461573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 24430227 - 24430148
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||  |||||| |||| | | ||||||| ||||||||    
T  24430227 cattggtattgtaaagcgacatataatttgggacaaatttttttccctaaaacgacatataatttgggacgaagggagta 24430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 8514 - 8436
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | |||||||||||||||||    
T  8514 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacggagggagtaa 8436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 18388 - 18474
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||| ||||||||||||  | |||| | | ||||||||||||||||    
T  18388 taatttttcattgatattgtaaagcgacatataatttgggacaaatattttttccaaagtgacatataatttgggacggagggagta 18474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 63430 - 63344
Alignment:
Q  223 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||||| ||||||||||||||||    
T  63430 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacattttgggacggagggagta 63344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 7673 - 7594
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagtaa 309  Q
    ||||| ||||| ||| ||||||||||||||||||||  |||||| ||||| || |||||| | |||||||||||||||||    
T  7673 cattggtattgtaaagcgacttataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagtaa 7594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 17536 - 17458
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||||||||||||||||||||  |||||| |||| || |||||| | ||||||||||||||||    
T  17536 cattggtattgtaaagcgacttataatttgggacaaatttttttttcaaagcgacatacaatttgggacggagggagta 17458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 1273 - 1352
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 308  Q
    |||||||||||  || |||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  1273 cattgatattgtgaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 1352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 151718 - 151639
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaa-attttttcc-aaaacgtcatacattgtgggacggagggagta 308  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||| ||| ||| || |||||| | ||||||||||||||||    
T  151718 cattgatattgtaaagcgacatataatttgggacaaatattttctcctaaagcgacatacaatttgggacggagggagta 151639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 23551 - 23629
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||| ||||||| || |||||| | ||||||||||||||||    
T  23551 cattggtattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 23629  T

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Target: scaffold0459 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 11699 - 11778
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt--ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||  ||||||| || |||||| | ||||||||||||||||    
T  11699 cattggtattgtaaagcgacatataatttgggacaattttttttttccaaagcgacatacaatttgggacggagggagta 11778  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 13006 - 13085
Alignment:
Q  231 cattgatattgcaaaacgacttataatttgggacaaaatttt--ttccaaaacgtcatacattgtgggacggagggagta 308  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||  ||||||| || |||||| | ||||||||||||||||    
T  13006 cattggtattgtaaagcgacatataatttgggacaattttttttttccaaagcgacatacaatttgggacggagggagta 13085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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