View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0679_low_13 (Length: 394)

Name: NF0679_low_13
Description: NF0679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0679_low_13
NF0679_low_13
[»] chr7 (57 HSPs)
chr7 (28-293)||(16043209-16043471)
chr7 (28-284)||(16448004-16448255)
chr7 (22-293)||(31087607-31087885)
chr7 (22-293)||(39210122-39210402)
chr7 (22-200)||(45734182-45734361)
chr7 (22-200)||(2776124-2776301)
chr7 (22-200)||(26485458-26485635)
chr7 (22-200)||(26682202-26682379)
chr7 (28-384)||(4201275-4201620)
chr7 (22-293)||(2108150-2108426)
chr7 (28-382)||(5145249-5145597)
chr7 (28-382)||(31562299-31562647)
chr7 (28-382)||(45389106-45389449)
chr7 (28-381)||(26437143-26437485)
chr7 (28-382)||(3447192-3447535)
chr7 (28-382)||(9620537-9620879)
chr7 (28-382)||(16749426-16749771)
chr7 (28-382)||(17525418-17525763)
chr7 (28-382)||(17527451-17527797)
chr7 (28-382)||(26667823-26668171)
chr7 (28-382)||(4143155-4143503)
chr7 (28-381)||(26535783-26536127)
chr7 (28-382)||(11442765-11443116)
chr7 (28-382)||(26514667-26515021)
chr7 (35-293)||(5129885-5130147)
chr7 (28-294)||(26317862-26318126)
chr7 (28-381)||(24590444-24590798)
chr7 (28-391)||(31126806-31127161)
chr7 (28-382)||(16734370-16734717)
chr7 (28-293)||(26273086-26273351)
chr7 (35-293)||(10914857-10915118)
chr7 (35-284)||(2156466-2156716)
chr7 (35-293)||(5161412-5161673)
chr7 (35-293)||(11422766-11423027)
chr7 (35-293)||(16501381-16501651)
chr7 (35-293)||(16516417-16516687)
chr7 (215-293)||(2776335-2776413)
chr7 (216-293)||(26682086-26682163)
chr7 (223-293)||(45734401-45734471)
chr7 (320-391)||(26317748-26317819)
chr7 (315-391)||(26272986-26273061)
chr7 (216-286)||(26512685-26512755)
chr7 (311-375)||(11422695-11422758)
chr7 (311-363)||(16447934-16447986)
chr7 (320-382)||(26512589-26512651)
chr7 (320-382)||(31087515-31087577)
chr7 (320-382)||(39210032-39210094)
chr7 (311-363)||(5130155-5130206)
chr7 (311-363)||(16501322-16501373)
chr7 (311-363)||(16516358-16516409)
chr7 (314-382)||(26681999-26682066)
chr7 (314-382)||(45734491-45734558)
chr7 (312-363)||(2156734-2156784)
chr7 (314-381)||(2776432-2776498)
chr7 (314-363)||(16043481-16043529)
chr7 (311-363)||(5161682-5161733)
chr7 (311-363)||(10843899-10843950)
[»] chr8 (36 HSPs)
chr8 (22-284)||(19658273-19658534)
chr8 (22-293)||(44563863-44564144)
chr8 (22-284)||(22078978-22079238)
chr8 (22-284)||(33245386-33245653)
chr8 (22-293)||(21374294-21374575)
chr8 (22-293)||(18711350-18711629)
chr8 (35-293)||(16285341-16285595)
chr8 (28-382)||(12090708-12091054)
chr8 (28-382)||(31356410-31356759)
chr8 (28-382)||(29831207-29831557)
chr8 (28-391)||(19206338-19206690)
chr8 (28-382)||(3327489-3327837)
chr8 (28-382)||(28359937-28360285)
chr8 (35-382)||(9356515-9356856)
chr8 (35-293)||(14559516-14559777)
chr8 (35-293)||(19689990-19690250)
chr8 (28-380)||(19676326-19676676)
chr8 (28-382)||(31487857-31488203)
chr8 (28-382)||(33260608-33260965)
chr8 (35-293)||(18792599-18792857)
chr8 (35-284)||(16279445-16279695)
chr8 (35-293)||(2135323-2135582)
chr8 (35-293)||(27606968-27607228)
chr8 (39-293)||(15770487-15770742)
chr8 (311-375)||(19658193-19658256)
chr8 (311-382)||(21374209-21374279)
chr8 (311-381)||(18792866-18792935)
chr8 (315-381)||(27606891-27606956)
chr8 (311-363)||(2135264-2135315)
chr8 (311-363)||(14559785-14559836)
chr8 (311-363)||(16279711-16279762)
chr8 (314-382)||(18711648-18711715)
chr8 (311-375)||(33245670-33245733)
chr8 (314-382)||(44564164-44564231)
chr8 (311-363)||(16285604-16285655)
chr8 (311-363)||(19690259-19690310)
[»] chr5 (77 HSPs)
chr5 (28-293)||(22890363-22890627)
chr5 (22-293)||(9547698-9547975)
chr5 (22-293)||(13183795-13184081)
chr5 (35-284)||(23894107-23894353)
chr5 (22-293)||(13439666-13439926)
chr5 (22-293)||(11326524-11326801)
chr5 (28-280)||(25200923-25201179)
chr5 (28-280)||(25265078-25265334)
chr5 (22-293)||(33878019-33878299)
chr5 (22-200)||(29888295-29888472)
chr5 (28-382)||(41676603-41676944)
chr5 (28-381)||(18373456-18373803)
chr5 (28-382)||(3791435-3791780)
chr5 (28-382)||(28957706-28958054)
chr5 (28-382)||(37356564-37356911)
chr5 (28-382)||(32594195-32594542)
chr5 (28-382)||(43080146-43080494)
chr5 (28-382)||(28651129-28651481)
chr5 (28-382)||(30170363-30170708)
chr5 (28-382)||(37756874-37757222)
chr5 (28-382)||(40471471-40471817)
chr5 (28-382)||(34618412-34618757)
chr5 (28-382)||(8663396-8663743)
chr5 (28-382)||(37768912-37769255)
chr5 (28-293)||(2512945-2513206)
chr5 (28-391)||(26482285-26482642)
chr5 (28-294)||(12134049-12134314)
chr5 (28-382)||(15756773-15757125)
chr5 (28-382)||(24725861-24726208)
chr5 (35-293)||(33779388-33779650)
chr5 (28-294)||(9319345-9319612)
chr5 (28-382)||(37669407-37669751)
chr5 (28-382)||(24683334-24683681)
chr5 (35-293)||(22997116-22997375)
chr5 (28-294)||(30153912-30154177)
chr5 (28-375)||(13322758-13323097)
chr5 (28-382)||(18498646-18498998)
chr5 (28-382)||(30031309-30031667)
chr5 (28-381)||(5639681-5640026)
chr5 (28-382)||(31824328-31824675)
chr5 (35-293)||(18125399-18125656)
chr5 (35-382)||(6876206-6876544)
chr5 (35-293)||(15656757-15657021)
chr5 (35-293)||(30936534-30936796)
chr5 (35-293)||(33294426-33294689)
chr5 (35-167)||(23716117-23716249)
chr5 (28-198)||(31433334-31433505)
chr5 (28-198)||(33518250-33518421)
chr5 (35-284)||(11551255-11551508)
chr5 (35-198)||(24686250-24686418)
chr5 (35-167)||(24971919-24972052)
chr5 (216-294)||(29888188-29888266)
chr5 (216-284)||(23628054-23628121)
chr5 (211-375)||(31433540-31433696)
chr5 (216-293)||(24686145-24686221)
chr5 (311-391)||(9319645-9319724)
chr5 (311-391)||(12134344-12134423)
chr5 (216-375)||(33518455-33518612)
chr5 (311-381)||(2513231-2513300)
chr5 (321-382)||(30154209-30154270)
chr5 (320-382)||(9547614-9547676)
chr5 (320-382)||(11326830-11326892)
chr5 (320-382)||(13183697-13183759)
chr5 (314-384)||(18125319-18125388)
chr5 (311-381)||(23628138-23628207)
chr5 (311-381)||(33294697-33294766)
chr5 (311-363)||(11551524-11551575)
chr5 (314-382)||(13439588-13439655)
chr5 (311-363)||(24972075-24972126)
chr5 (314-382)||(33878319-33878386)
chr5 (311-381)||(15656680-15656749)
chr5 (35-93)||(23750653-23750711)
chr5 (311-381)||(33779658-33779727)
chr5 (311-360)||(23894375-23894423)
chr5 (314-375)||(29888109-29888169)
chr5 (315-363)||(22997057-22997104)
chr5 (311-363)||(30936805-30936856)
[»] chr2 (68 HSPs)
chr2 (22-293)||(27393440-27393708)
chr2 (28-293)||(21701262-21701524)
chr2 (22-293)||(31890576-31890852)
chr2 (22-293)||(22925233-22925510)
chr2 (28-284)||(19454527-19454782)
chr2 (22-293)||(16164362-16164642)
chr2 (22-293)||(34157727-34158006)
chr2 (22-200)||(27119405-27119584)
chr2 (22-200)||(3785371-3785548)
chr2 (28-382)||(34288235-34288580)
chr2 (28-382)||(34293295-34293640)
chr2 (28-200)||(27779103-27779275)
chr2 (28-200)||(27818861-27819033)
chr2 (28-382)||(11633197-11633545)
chr2 (28-382)||(37949335-37949682)
chr2 (28-382)||(12588691-12589039)
chr2 (28-382)||(13934560-13934904)
chr2 (28-382)||(27805588-27805934)
chr2 (28-375)||(39891955-39892293)
chr2 (28-382)||(9347999-9348342)
chr2 (28-382)||(39049832-39050182)
chr2 (28-382)||(258766-259113)
chr2 (28-382)||(12714614-12714962)
chr2 (28-382)||(21675188-21675542)
chr2 (28-382)||(34863561-34863915)
chr2 (28-382)||(37927251-37927600)
chr2 (28-381)||(16827352-16827698)
chr2 (28-381)||(16893783-16894128)
chr2 (28-375)||(19414521-19414859)
chr2 (35-382)||(40235399-40235739)
chr2 (28-382)||(31878162-31878517)
chr2 (28-294)||(37684004-37684269)
chr2 (28-294)||(37699269-37699534)
chr2 (35-284)||(23126668-23126919)
chr2 (22-148)||(34302700-34302827)
chr2 (22-142)||(5807170-5807291)
chr2 (28-375)||(32051679-32052027)
chr2 (35-293)||(27432532-27432797)
chr2 (35-293)||(28884102-28884360)
chr2 (35-293)||(12657430-12657689)
chr2 (35-382)||(37377049-37377402)
chr2 (35-167)||(20839789-20839922)
chr2 (216-293)||(3785575-3785652)
chr2 (216-293)||(27779317-27779394)
chr2 (216-293)||(27819074-27819151)
chr2 (216-293)||(20839989-20840065)
chr2 (143-200)||(34271982-34272039)
chr2 (216-284)||(34271873-34271940)
chr2 (311-382)||(37683908-37683978)
chr2 (311-382)||(37699173-37699243)
chr2 (225-284)||(27119625-27119683)
chr2 (314-382)||(3785673-3785740)
chr2 (314-382)||(22925145-22925212)
chr2 (320-375)||(27393731-27393786)
chr2 (311-381)||(23126582-23126651)
chr2 (320-382)||(27119709-27119771)
chr2 (311-381)||(28884368-28884437)
chr2 (311-363)||(12657697-12657748)
chr2 (314-382)||(16164660-16164727)
chr2 (311-363)||(21701202-21701253)
chr2 (311-363)||(27432473-27432524)
chr2 (314-382)||(27779414-27779481)
chr2 (314-382)||(27819171-27819238)
chr2 (314-382)||(31890488-31890555)
chr2 (314-382)||(34158024-34158091)
chr2 (311-375)||(34271793-34271856)
chr2 (311-363)||(19454455-19454506)
chr2 (311-363)||(20840074-20840125)
[»] chr6 (72 HSPs)
chr6 (22-293)||(28163375-28163651)
chr6 (28-293)||(22456152-22456418)
chr6 (22-293)||(26788703-26788975)
chr6 (22-293)||(27251892-27252164)
chr6 (22-293)||(27197076-27197345)
chr6 (28-391)||(27288319-27288684)
chr6 (22-293)||(8891508-8891789)
chr6 (22-293)||(8902743-8903024)
chr6 (22-293)||(13521229-13521509)
chr6 (22-293)||(27359147-27359427)
chr6 (22-293)||(27449490-27449770)
chr6 (22-382)||(33373381-33373734)
chr6 (22-200)||(14142544-14142721)
chr6 (28-382)||(28209336-28209683)
chr6 (28-391)||(27270542-27270894)
chr6 (28-391)||(27627666-27628020)
chr6 (28-382)||(26775578-26775924)
chr6 (28-382)||(29574895-29575243)
chr6 (28-382)||(27046270-27046616)
chr6 (28-382)||(4722102-4722448)
chr6 (28-382)||(27487011-27487362)
chr6 (28-382)||(3697963-3698312)
chr6 (28-382)||(16676021-16676369)
chr6 (28-382)||(4527168-4527513)
chr6 (28-382)||(26114379-26114724)
chr6 (28-382)||(4543741-4544089)
chr6 (28-382)||(4774765-4775109)
chr6 (28-382)||(16941994-16942341)
chr6 (28-381)||(30555984-30556330)
chr6 (35-293)||(26920269-26920528)
chr6 (28-382)||(4759646-4759992)
chr6 (35-382)||(29503304-29503645)
chr6 (28-382)||(17090410-17090760)
chr6 (35-293)||(27021028-27021286)
chr6 (35-293)||(26990780-26991040)
chr6 (35-284)||(15422373-15422624)
chr6 (35-293)||(22932929-22933187)
chr6 (35-293)||(23855374-23855632)
chr6 (35-293)||(24302664-24302925)
chr6 (28-382)||(27009612-27009960)
chr6 (35-293)||(20162505-20162767)
chr6 (35-200)||(22170163-22170326)
chr6 (35-293)||(29551364-29551631)
chr6 (35-293)||(13296996-13297258)
chr6 (35-198)||(16751743-16751909)
chr6 (35-284)||(24865606-24865859)
chr6 (216-293)||(14142431-14142508)
chr6 (329-382)||(34462473-34462526)
chr6 (311-363)||(22932870-22932921)
chr6 (311-363)||(23855315-23855366)
chr6 (320-382)||(8891419-8891481)
chr6 (320-382)||(8902654-8902716)
chr6 (211-293)||(22170064-22170148)
chr6 (311-375)||(24302591-24302655)
chr6 (314-391)||(26788994-26789070)
chr6 (314-391)||(27197363-27197439)
chr6 (314-391)||(27251796-27251872)
chr6 (311-363)||(13296937-13296988)
chr6 (314-382)||(13521142-13521209)
chr6 (314-382)||(14142345-14142412)
chr6 (311-363)||(15422306-15422357)
chr6 (311-375)||(20162779-20162842)
chr6 (311-363)||(24865875-24865926)
chr6 (311-363)||(26991048-26991099)
chr6 (311-363)||(27021295-27021346)
chr6 (314-382)||(27359061-27359128)
chr6 (314-382)||(27449404-27449471)
chr6 (311-381)||(29551639-29551708)
chr6 (314-375)||(22456072-22456132)
chr6 (341-382)||(28163695-28163736)
chr6 (311-363)||(16751980-16752031)
chr6 (311-363)||(26920536-26920587)
[»] scaffold0109 (2 HSPs)
scaffold0109 (22-293)||(22277-22545)
scaffold0109 (320-375)||(22565-22620)
[»] chr1 (13 HSPs)
chr1 (28-284)||(16206144-16206402)
chr1 (22-200)||(28152624-28152801)
chr1 (28-293)||(20462865-20463133)
chr1 (28-384)||(41791332-41791679)
chr1 (28-280)||(20339562-20339822)
chr1 (34-382)||(10946969-10947311)
chr1 (35-382)||(51640109-51640452)
chr1 (35-382)||(10964561-10964899)
chr1 (28-382)||(28586865-28587219)
chr1 (311-375)||(20339474-20339537)
chr1 (225-284)||(28152838-28152897)
chr1 (320-382)||(28152924-28152986)
chr1 (312-363)||(16206074-16206124)
[»] chr4 (39 HSPs)
chr4 (28-293)||(15229769-15230039)
chr4 (36-293)||(1902165-1902421)
chr4 (28-284)||(15283041-15283299)
chr4 (22-286)||(15389493-15389755)
chr4 (22-200)||(24459961-24460140)
chr4 (28-384)||(5007773-5008122)
chr4 (28-382)||(54835287-54835636)
chr4 (35-293)||(34187062-34187324)
chr4 (28-382)||(27161341-27161687)
chr4 (28-382)||(39852538-39852882)
chr4 (35-293)||(24590463-24590719)
chr4 (28-382)||(33671824-33672169)
chr4 (35-382)||(6571760-6572103)
chr4 (28-382)||(18798638-18798984)
chr4 (28-382)||(14100441-14100788)
chr4 (28-382)||(40103661-40104009)
chr4 (28-284)||(30755654-30755912)
chr4 (35-293)||(14761409-14761668)
chr4 (28-294)||(31124621-31124889)
chr4 (35-293)||(14666925-14667183)
chr4 (35-293)||(24114569-24114829)
chr4 (28-375)||(21971601-21971939)
chr4 (35-293)||(36342619-36342879)
chr4 (35-293)||(17014950-17015213)
chr4 (216-293)||(24459851-24459928)
chr4 (320-382)||(18315202-18315264)
chr4 (314-375)||(31124543-31124603)
chr4 (311-375)||(30755935-30755998)
chr4 (311-381)||(14761331-14761401)
chr4 (311-363)||(1902428-1902479)
chr4 (311-363)||(14667191-14667242)
chr4 (314-382)||(24459762-24459829)
chr4 (311-363)||(34187003-34187054)
chr4 (315-381)||(24590386-24590451)
chr4 (311-381)||(36342542-36342611)
chr4 (311-360)||(15230047-15230095)
chr4 (314-363)||(17015224-17015272)
chr4 (311-363)||(15282971-15283022)
chr4 (320-384)||(15389400-15389464)
[»] scaffold0032 (2 HSPs)
scaffold0032 (22-294)||(119162-119433)
scaffold0032 (314-375)||(119085-119145)
[»] chr3 (91 HSPs)
chr3 (22-293)||(32293476-32293748)
chr3 (22-284)||(5653069-5653331)
chr3 (28-284)||(19696338-19696595)
chr3 (22-293)||(4626626-4626907)
chr3 (22-293)||(31033373-31033651)
chr3 (28-293)||(18532234-18532498)
chr3 (22-382)||(29663037-29663388)
chr3 (22-200)||(5713909-5714086)
chr3 (22-200)||(5724819-5724996)
chr3 (22-200)||(5767372-5767549)
chr3 (56-284)||(16622645-16622869)
chr3 (22-200)||(17993183-17993360)
chr3 (28-384)||(4418765-4419110)
chr3 (28-382)||(8213584-8213928)
chr3 (28-382)||(18244585-18244934)
chr3 (35-293)||(32441007-32441266)
chr3 (28-382)||(7075058-7075402)
chr3 (28-381)||(7998408-7998752)
chr3 (28-384)||(11108417-11108761)
chr3 (28-382)||(5468831-5469181)
chr3 (28-382)||(20574910-20575259)
chr3 (28-382)||(51783868-51784216)
chr3 (28-375)||(22868922-22869268)
chr3 (28-375)||(22883981-22884327)
chr3 (35-382)||(10644923-10645266)
chr3 (28-382)||(36995265-36995612)
chr3 (28-382)||(18227037-18227389)
chr3 (28-382)||(5607381-5607734)
chr3 (28-294)||(10397979-10398244)
chr3 (28-382)||(24330005-24330356)
chr3 (28-382)||(28114021-28114366)
chr3 (28-382)||(4344743-4345099)
chr3 (35-293)||(8297825-8298086)
chr3 (35-382)||(17983016-17983361)
chr3 (28-382)||(28023121-28023475)
chr3 (28-382)||(5594424-5594769)
chr3 (28-382)||(21676539-21676896)
chr3 (28-382)||(47025299-47025646)
chr3 (35-293)||(20067896-20068155)
chr3 (28-294)||(31962617-31962885)
chr3 (35-293)||(6203759-6204018)
chr3 (35-293)||(35882619-35882881)
chr3 (28-382)||(48467773-48468120)
chr3 (28-382)||(5015558-5015907)
chr3 (35-281)||(8287628-8287876)
chr3 (35-293)||(4794780-4795037)
chr3 (35-284)||(15739248-15739499)
chr3 (35-293)||(15890852-15891111)
chr3 (28-382)||(28341025-28341370)
chr3 (35-280)||(18332481-18332725)
chr3 (35-293)||(18275198-18275457)
chr3 (35-293)||(18290499-18290758)
chr3 (35-293)||(18305800-18306059)
chr3 (35-293)||(29146901-29147160)
chr3 (35-284)||(22385732-22385983)
chr3 (35-293)||(4723484-4723745)
chr3 (35-293)||(18053115-18053374)
chr3 (216-293)||(5714114-5714191)
chr3 (216-293)||(5725024-5725101)
chr3 (216-293)||(5767267-5767344)
chr3 (216-293)||(17993072-17993149)
chr3 (311-381)||(31962523-31962593)
chr3 (311-382)||(10398267-10398337)
chr3 (311-375)||(5653348-5653411)
chr3 (311-381)||(18275120-18275190)
chr3 (311-381)||(18290421-18290491)
chr3 (311-381)||(18305722-18305792)
chr3 (311-363)||(16622576-16622628)
chr3 (311-363)||(19696614-19696665)
chr3 (311-381)||(4723754-4723823)
chr3 (315-381)||(4794703-4794768)
chr3 (320-382)||(5714220-5714282)
chr3 (320-382)||(5725130-5725192)
chr3 (320-382)||(5767176-5767238)
chr3 (320-382)||(17992982-17993044)
chr3 (320-382)||(32293775-32293837)
chr3 (314-382)||(4626927-4626994)
chr3 (311-363)||(6204026-6204077)
chr3 (311-375)||(8287544-8287607)
chr3 (311-363)||(8298094-8298145)
chr3 (311-363)||(15890791-15890842)
chr3 (311-363)||(18053385-18053436)
chr3 (311-363)||(18332760-18332811)
chr3 (311-363)||(22385664-22385715)
chr3 (314-382)||(31033287-31033354)
chr3 (311-363)||(32441274-32441325)
chr3 (311-363)||(35882889-35882940)
chr3 (28-63)||(16624978-16625013)
chr3 (311-381)||(20068163-20068232)
chr3 (311-363)||(15739180-15739231)
chr3 (311-363)||(29146842-29146893)
[»] scaffold0038 (1 HSPs)
scaffold0038 (28-382)||(9834-10181)
[»] scaffold0260 (2 HSPs)
scaffold0260 (28-280)||(1885-2145)
scaffold0260 (311-375)||(1797-1860)
[»] scaffold0144 (1 HSPs)
scaffold0144 (28-382)||(24215-24572)
[»] scaffold0237 (1 HSPs)
scaffold0237 (28-381)||(12953-13301)
[»] scaffold0089 (5 HSPs)
scaffold0089 (35-293)||(45093-45349)
scaffold0089 (35-293)||(31649-31913)
scaffold0089 (35-293)||(38168-38433)
scaffold0089 (311-363)||(45034-45085)
scaffold0089 (311-363)||(38109-38160)
[»] scaffold0159 (4 HSPs)
scaffold0159 (28-382)||(7203-7560)
scaffold0159 (28-382)||(20756-21113)
scaffold0159 (28-281)||(11416-11673)
scaffold0159 (118-382)||(21562-21828)
[»] scaffold0415 (1 HSPs)
scaffold0415 (28-382)||(7900-8243)
[»] scaffold0124 (3 HSPs)
scaffold0124 (28-153)||(45862-45987)
scaffold0124 (35-293)||(32344-32613)
scaffold0124 (311-381)||(32621-32690)
[»] scaffold0350 (1 HSPs)
scaffold0350 (28-293)||(5345-5608)
[»] scaffold0336 (1 HSPs)
scaffold0336 (28-382)||(11451-11803)
[»] scaffold0143 (5 HSPs)
scaffold0143 (35-293)||(29185-29447)
scaffold0143 (320-382)||(7146-7208)
scaffold0143 (223-293)||(7049-7120)
scaffold0143 (311-363)||(29455-29506)
scaffold0143 (311-363)||(18254-18305)
[»] scaffold1697 (2 HSPs)
scaffold1697 (35-143)||(696-804)
scaffold1697 (216-391)||(443-612)
[»] scaffold0748 (1 HSPs)
scaffold0748 (213-391)||(6683-6857)
[»] scaffold0320 (1 HSPs)
scaffold0320 (216-293)||(20293-20370)


Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 28 - 293
Target Start/End: Original strand, 16043209 - 16043471
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16043209 cattccttcaatcatgcatgtttccgagtaatgtgttttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 16043308  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgga 227  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |        |||||||||||||||||    
T  16043309 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacgactttta---tttttagtgctttttccttgga 16043405  T
Q  228 aataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  16043406 aataatggtaatgccagaaaaaaccaaaacatctttatttttcttattaatttcaaaaatctgcat 16043471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 28 - 284
Target Start/End: Complemental strand, 16448255 - 16448004
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16448255 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaaaatcctctcgctctgcccgaagcgaaagtg 16448156  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgga 227  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |        |||||||||||||||||    
T  16448155 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacgactttta---tttttagtgctttttccttgga 16448059  T
Q  228 aataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||||| |||||||||||||||| | |   |||||||||||||||||||    
T  16448058 aataatggtaatgccagaaaaaaccaaaacaccgt--attttcttattaatttcaaa 16448004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 31087885 - 31087607
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31087885 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctacccgaagcg 31087786  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag--------t 213  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |         |        |    
T  31087785 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 31087687  T
Q  214 gctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
      ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  31087686 ctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 31087607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 39210402 - 39210122
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39210402 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 39210303  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgct----- 216  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||| |||||||||||||||||||| |        |||| |         
T  39210302 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaattgtcgtttctttcacgactttta--ttttttagtgatttttt 39210206  T
Q  217 -------ttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
           |||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39210205 tttcttttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 39210122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 45734182 - 45734361
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45734182 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 45734281  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    || ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  45734282 gacagtaatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttt 45734361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 2776124 - 2776301
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2776124 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 2776223  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  2776224 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 2776301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 26485458 - 26485635
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26485458 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 26485557  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  26485558 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 26485635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 26682379 - 26682202
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26682379 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 26682280  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  26682279 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 26682202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 28 - 384
Target Start/End: Original strand, 4201275 - 4201620
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  4201275 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 4201374  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgg 226  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||||||||| ||||||||||||||||||            ||||| |||| |||||    
T  4201375 atattttctgtaagggcgtgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgact----gcttttttagtgcctttttcttgg 4201470  T
Q  227 aaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatca 326  Q
    ||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | |||||||                |||||||| |||||||    
T  4201471 aaaaaatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaacaactctttct-aaaatca 4201562  T
Q  327 tccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatg 384  Q
    ||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||    
T  4201563 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 4201620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 2108426 - 2108150
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtg-ttttgtttttcaaaataacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  2108426 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagtgcttttgtttttcaaaataacaatcctctcgctctgcccaaagc 2108327  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgtt----atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc- 215  Q
    || |||||||||||||| |||||||||||||||||||||| ||||||    |  || |||||| ||||||||||||||| |  |          |||||     
T  2108326 gagagtgatattttctgtaagggcatgtttgtttcggcattgccgttgataaaaaaaaaaaattgtcgtttctttcacggc--tgcttttttttagtgcc 2108229  T
Q  216 -tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
     |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  2108228 ttttttccttggaaataatggtaatgccagaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 2108150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 5145597 - 5145249
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  5145597 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 5145499  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| ||||| |||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  5145498 atattttctgtaagggtatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 5145402  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                 ||||||| |||||    
T  5145401 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaat---tctttct-aaaat 5145307  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  5145306 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5145249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 31562647 - 31562299
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  31562647 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31562548  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    || ||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||| |          |||||||||| ||||    
T  31562547 attttttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactat----ttttttagtgctttttccctt 31562452  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  31562451 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg---aaaaaaaaaaaaactctttct-aaaat 31562357  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  31562356 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31562299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 45389106 - 45389449
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  45389106 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 45389204  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  45389205 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact----acttttttagtgctttttccctt 45389300  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||     
T  45389301 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaac 45389391  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  45389392 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 45389449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 381
Target Start/End: Original strand, 26437143 - 26437485
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26437143 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26437241  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  26437242 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 26437338  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  26437339 ggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttct-aaaat 26437428  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  26437429 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 26437485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 3447192 - 3447535
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  3447192 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 3447290  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||  |||||||            |||||||||| ||||    
T  3447291 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttctcccacgact----actcttttagtgctttttccctt 3447386  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  3447387 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 3447477  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  3447478 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 3447535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 9620537 - 9620879
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  9620537 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 9620635  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||  |||||||            |||||||||| ||||    
T  9620636 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttctcccacgact----actcttttagtgctttttccctt 9620731  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  9620732 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttct-aaaat 9620821  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  9620822 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 9620879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 16749771 - 16749426
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  16749771 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16749673  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||| ||||| |||||| | |         |||| |||| |||||    
T  16749672 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgcttcttccacgac-tactttttttttagtgtttttcccttg 16749574  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  16749573 gaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaatc 16749483  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| ||||||||||| |||||| ||||||||||| ||||||    
T  16749482 atccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 16749426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 17525418 - 17525763
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  17525418 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 17525516  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||| ||||| |||||| | |         |||| |||| |||||    
T  17525517 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgcttcttccacgac-tactttttttttagtgtttttcccttg 17525615  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  17525616 gaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaatc 17525706  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| ||||||||||| |||||| ||||||||||| ||||||    
T  17525707 atccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 17525763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 17527797 - 17527451
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  17527797 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 17527699  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||| ||||| |||||| | |         |||| |||| |||||    
T  17527698 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgcttcttccacgac-tactttttttttagtgtttttcccttg 17527600  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  17527599 gaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaatc 17527508  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| ||||||||||| |||||| ||||||||||| ||||||    
T  17527507 atccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 17527451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 26668171 - 26667823
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26668171 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26668073  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt--cct 223  Q
    |||||||||| ||||||||||||||||||||||||||||| || |||||||  | |||||||||| ||||||  |          ||||||||||  |||    
T  26668072 atattttctgtaagggcatgtttgtttcggcatcgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgcttttttccct 26667975  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  26667974 tggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaa 26667882  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  26667881 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26667823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 4143503 - 4143155
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4143503 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4143405  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  4143404 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 4143307  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | ||||||                 |||||||| |||||    
T  4143306 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcat----aaaaaaaaaaaaactctttct-aaaat 4143213  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  4143212 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4143155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 28 - 381
Target Start/End: Complemental strand, 26536127 - 26535783
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26536127 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26536029  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  26536028 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact----acttttttagtgctttttccctt 26535933  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  26535932 ggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaat 26535840  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  26535839 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 26535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 11442765 - 11443116
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  11442765 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 11442863  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact-ttcannnnnnnnagtgcttttt-cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |          |||||||||| |||    
T  11442864 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttttttttagtgctttttccct 11442963  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  11442964 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg----aaaaaaaaaaaactctttct-aaaa 11443057  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  11443058 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 11443116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 26514667 - 26515021
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  26514667 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 26514765  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||| ||||| |||||||   |        |||||||||| ||||    
T  26514766 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcggttcttccacgact---actttttttagtgctttttccctt 26514862  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg---nnnnnnnnnnnnnnnnctctttctaaa 321  Q
    ||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                   |||||||| ||    
T  26514863 ggaaataatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaactctttct-aa 26514960  T
Q  322 aatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  26514961 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26515021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 5129885 - 5130147
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  5129885 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 5129984  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc---tttttccttggaa 228  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||  |          |||||   ||||| |||||||    
T  5129985 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac--tgcttttttttagtgccttttttttcttggaa 5130082  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  5130083 ataatggtaatgccagaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 5130147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 26318126 - 26317862
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  26318126 cattccttcaatcatgcatgttttcgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 26318027  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||  |          ||||| |||| ||||    
T  26318026 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac--tgcttttttttagtgcctttttcttg 26317929  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||    
T  26317928 gaaa-aatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaacctgcatg 26317862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 381
Target Start/End: Complemental strand, 24590798 - 24590444
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| ||| || ||||    
T  24590798 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttattgctttgtttt-caaaataacaatcctctcgctctgcccaaagtgagagtg 24590700  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  24590699 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttagtgctttttccctt 24590600  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg-nnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    ||||| ||||||||| | ||||||||||||||||| | || ||||||||||||||||||| | |||||||                 |||||||| ||||    
T  24590599 ggaaacaatggtaataccagaaaaaaccaaaacatttgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaactctttct-aaaa 24590502  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  24590501 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 24590444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 391
Target Start/End: Original strand, 31126806 - 31127161
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||| |||||| ||||    
T  31126806 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaaccctctcgctctgcccaaagcgagagtg 31126904  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatc-gtcgtttctttcacgactttcannnnnnnnagtgctttttcc-tt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||||| |  |||||||||| |||||||  |         |||||||||||| ||    
T  31126905 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgacta-ctttttttttagtgctttttccctt 31127003  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| |||||| ||||||||||||||| | |||||||                |||||||||||| |    
T  31127004 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt-cttattaatttcaaaaatctgcatgaaaaaaaga-------ctctttctaaaa-t 31127094  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    ||| ||| |||| || |||| |||||||||||||||||| ||||||||||| |||||| | ||||||    
T  31127095 cattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatcctacggttcttc 31127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 16734717 - 16734370
Alignment:
Q  28 cattcattcaatcatgcatgtttccga-gtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagt 126  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| |||    
T  16734717 cattccttcaatcatgcatgtttccgaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagt 16734619  T
Q  127 gatattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttcctt 224  Q
    ||||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||| ||||| |||||| | |         |||| |||| ||||    
T  16734618 gatattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgcttcttccacgac-tactttttttttagtgtttttccctt 16734520  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  16734519 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 16734428  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| ||||||||||| |||||| ||||||||||| ||||||    
T  16734427 catccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 16734370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 293
Target Start/End: Complemental strand, 26273351 - 26273086
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26273351 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26273253  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  26273252 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgctttttccctt 26273154  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | ||||||    
T  26273153 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcat 26273086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 10915118 - 10914857
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 132  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | || |||||  ||||||||||||||||||||||||||| |||||| |||||||||    
T  10915118 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttatttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatt 10915019  T
Q  133 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaa 228  Q
    ||||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||  |          |||||  |||||||||||||    
T  10915018 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac--tgcttttttttagtgccttttttccttggaa 10914921  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  10914920 ataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 10914857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 35 - 284
Target Start/End: Original strand, 2156466 - 2156716
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||| | | ||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||    
T  2156466 tcaatcatgcatgtttctgagtaatataccttgttgcttaaatatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 2156565  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa-tcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || |||||||| | ||||||||||||||||||            |||||  ||||||||||||||    
T  2156566 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaagttgtcgtttctttcacgact---gctttttttagtgccttttttccttggaaa 2156662  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  2156663 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 2156716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 5161412 - 5161673
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  5161412 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 5161511  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc---tttttccttggaa 228  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||  |          ||| |   ||||| |||||||    
T  5161512 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac--tgcttttttttagtaccttttttttcttggaa 5161609  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||| |||||||||||||| |||| || ||||||||||||||||||| | ||||||    
T  5161610 ataatggtaatgccagaaaaaaccaaaatatctgta-ttttcttattaatttcaaaaatctgcat 5161673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 11423027 - 11422766
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt---caaaataacaatcctctcgctctgcccgaagcgaaagtgatat 131  Q
    ||||||||||||||||| ||||||| |  || ||||||||||| ||| ||||||   |||||| |||||||||||||||||||| |||||| ||||||||    
T  11423027 tcaatcatgcatgtttctgagtaatatacctcgttgcttaagtatttcgttttttttcaaaatgacaatcctctcgctctgcccaaagcgagagtgatat 11422928  T
Q  132 tttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttgga 227  Q
    |||||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| |||||||    
T  11422927 tttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact----gcttttttagtgctttttcccttgga 11422832  T
Q  228 aataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  11422831 aataatggtaatgctagaaaaaaaccaaaacatctata-ttttcttattaatttcaaaaatctgcat 11422766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 16501651 - 16501381
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  16501651 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 16501552  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataa---------aaatcgtcgtttctttcacgact-ttcannnnnnnnagtgc-tttttc 221  Q
    |||| ||||||| |||||||||||||| |||||| || |||||         |||| ||||||||||||||||||  |          ||||| ||||||    
T  16501551 tctgtaagggcacgtttgtttcggcattgccgttgattaataaaaaaaattgaaattgtcgtttctttcacgactgctttttttttttagtgcttttttc 16501452  T
Q  222 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  16501451 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 16501381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 16516687 - 16516417
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  16516687 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 16516588  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataa---------aaatcgtcgtttctttcacgact-ttcannnnnnnnagtgc-tttttc 221  Q
    |||| ||||||| |||||||||||||| |||||| || |||||         |||| ||||||||||||||||||  |          ||||| ||||||    
T  16516587 tctgtaagggcacgtttgtttcggcattgccgttgattaataaaaaaaattgaaattgtcgtttctttcacgactgctttttttttttagtgcttttttc 16516488  T
Q  222 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  16516487 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 16516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 2776335 - 2776413
Alignment:
Q  215 ctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  2776335 cttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 2776413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 26682163 - 26682086
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  26682163 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 26682086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 45734401 - 45734471
Alignment:
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  45734401 ttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 45734471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 320 - 391
Target Start/End: Complemental strand, 26317819 - 26317748
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||| |||||    
T  26317819 aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgcctcttc 26317748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 26273061 - 26272986
Alignment:
Q  315 ttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||| |||||    
T  26273061 ttctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgcctcttc 26272986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 26512755 - 26512685
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaaga 286  Q
    ||||| |||||||| ||||||||| | |||||||||||||| || ||||||||| |||||||||| |||||    
T  26512755 ttttttcttggaaaaaatggtaataccagaaaaaaccaaaaaatttttattttttttattaattttaaaga 26512685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 11422758 - 11422695
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||||||| |||| ||||||    
T  11422758 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaacccgttgagcacagt 11422695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 16447986 - 16447934
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    ||||||||||||||||||||| |||| |||||||||| | |||||||||||||    
T  16447986 ctctttctaaaaatcatccaaccattttacgcagattaagccataataaaccc 16447934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 26512651 - 26512589
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  26512651 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 26512589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 31087577 - 31087515
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  31087577 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31087515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 39210094 - 39210032
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  39210094 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 39210032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 5130155 - 5130206
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  5130155 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 5130206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 16501373 - 16501322
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  16501373 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 16501322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 16516409 - 16516358
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  16516409 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 16516358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 26682066 - 26681999
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  26682066 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 26681999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 45734491 - 45734558
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  45734491 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 45734558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 2156734 - 2156784
Alignment:
Q  312 tctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    ||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  2156734 tctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 2156784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 2776432 - 2776498
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| |||||    
T  2776432 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatcct 2776498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 16043481 - 16043529
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    ||||||||| |||||||| |||| |||||||||| |||||||||||||||    
T  16043481 tttctaaaa-tcatccaaccattttacgcagattaaaccataataaaccc 16043529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 5161682 - 5161733
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| |||||    
T  5161682 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaaccc 5161733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 10843950 - 10843899
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||| |||||||    
T  10843950 ctctttctaaaa-tcatccaaccattttacgcagattgagccatagtaaaccc 10843899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 22 - 284
Target Start/End: Complemental strand, 19658534 - 19658273
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19658534 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 19658435  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttt 219  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |        | ||| ||||    
T  19658434 gaaagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgactttta---tttttattgcttttt 19658338  T
Q  220 tccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19658337 tccttggaaataatggtaatgccagaaaaaaccaaaacatctttatttttcttattaatttcaaa 19658273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 44563863 - 44564144
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44563863 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 44563962  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca----------nnnnnnnna 211  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |                  |    
T  44563963 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttttattttattttttttttttta 44564061  T
Q  212 g-tgctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    | ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  44564062 gttgctttttccttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 44564144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 22 - 284
Target Start/End: Complemental strand, 22079238 - 22078978
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22079238 catcaacattccttcaatcatgcataattctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctcttcccgaagcg 22079139  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-ttttt 220  Q
    | ||||||| |||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||          ||||| |||||    
T  22079138 agagtgata-tttctgaaagggcgtgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacggcttt--ttacttttagtgctttttt 22079042  T
Q  221 ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  22079041 ccttggaaataatggtaatgccagaaaaaaccaaaacatctttatttttcttattaattacaaa 22078978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 284
Target Start/End: Original strand, 33245386 - 33245653
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaa-tcctctcgctctgcccgaag 119  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  33245386 catcatcattccttcaatcatgcatgtttccgaataatgtgttttgttgcttaagtgttttgtttttcaaaaataacaaatcctctcgctctgcccgaag 33245485  T
Q  120 cgaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca--nnnnnnnnagtgc-- 215  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |          |||||      
T  33245486 cgacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttttatttattttttagtgctt 33245585  T
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  33245586 tttttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 33245653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 21374575 - 21374294
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  21374575 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttctttttcaaaataaccatcctctcgctctgcccgaagcg 21374476  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtg------- 214  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        ||||           
T  21374475 aaagtgata-tttctggaaaggcgtgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttta-tttttttagtgatttttt 21374378  T
Q  215 -----ctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
         |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  21374377 tttttcttttttcttggaaataatggtaatgccagaaaaaaccaaaacatctttattttccttatcaatttcaaagatctgcat 21374294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 18711350 - 18711629
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18711350 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 18711449  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag--------- 212  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |         |             
T  18711450 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 18711548  T
Q  213 tgctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |  ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  18711549 tctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 18711629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 16285341 - 16285595
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| || |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16285341 tcaatcatgcatgtttctgagtaatatgccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccgaagcgagagtgatatttt 16285440  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttggaaataatg 234  Q
    ||| |||||||||||||||| |||||||| ||| | ||||||||| ||||||||||||||||||   |        ||||||||||||||||||||||||    
T  16285441 ctgtaagggcatgtttgttttggcatcgctgttgttaataaaaattgtcgtttctttcacgactgcta---tttttagtgctttttccttggaaataatg 16285537  T
Q  235 gtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||| |||||||||||||| |||| || ||||||||||||||||||| ||||||||    
T  16285538 gtaatgccagaaaaaaccaaaatatctgta-ttttcttattaatttcaaaaagctgcat 16285595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 12091054 - 12090708
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  12091054 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 12090955  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  12090954 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 12090858  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||||||||    
T  12090857 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttctaaaaat 12090766  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  12090765 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 12090708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 31356410 - 31356759
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  31356410 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31356509  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  31356510 atattttctgtaagggcatgtttgtttcggcattgccgttgatcaataaaattttgtcgtttcttccacgac-tacttttttttaagtgctttttccctt 31356608  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  31356609 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaat 31356701  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  31356702 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31356759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 29831207 - 29831557
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  29831207 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 29831305  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact-ttcannnnnnnnagtgcttttt-cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |          |||||||||| |||    
T  29831306 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttttttaaagtgctttttccct 29831405  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  29831406 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaa 29831498  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  29831499 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29831557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 28 - 391
Target Start/End: Complemental strand, 19206690 - 19206338
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  19206690 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 19206591  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||  |          ||||| |||| ||||    
T  19206590 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac--tgcttttttttagtgcctttttcttg 19206493  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  19206492 gaaa-aatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttct-aaaatc 19206404  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||| |||||    
T  19206403 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgcctcttc 19206338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 3327837 - 3327489
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||| |||| ||||||||  |||||||||||||||||||||||||| ||||||  |||    
T  3327837 cattccttcaatcatgcatgtttctgagtaatgtgtcctgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagggtg 3327738  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    || ||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  3327737 attttttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 3327640  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||||||||    
T  3327639 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttctaaaaat 3327547  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  3327546 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 3327489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 28360285 - 28359937
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28360285 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28360187  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  28360186 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgctttttccctt 28360088  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  28360087 ggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaat 28359995  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  28359994 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28359937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 35 - 382
Target Start/End: Original strand, 9356515 - 9356856
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||  ||||||||||    
T  9356515 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtgatatttt 9356613  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaata 231  Q
    ||| |||||||||||||||||||| | |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||||||| |    
T  9356614 ctgtaagggcatgtttgtttcggcgttgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttagtgctttttcccttggaaaca 9356713  T
Q  232 atggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcatccaa 331  Q
    |||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||||||||    
T  9356714 atggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaatcatccaa 9356805  T
Q  332 tcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  9356806 tcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 9356856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 14559516 - 14559777
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttg-tttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||| |||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  14559516 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgctttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 14559615  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||  |          |||||  ||||||||||||||    
T  14559616 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac--tgcttttttttagtgccttttttccttggaaa 14559713  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  14559714 taatggtaatgccagaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 14559777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 19689990 - 19690250
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  19689990 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 19690089  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||||||||||||           ||||| ||||||||||||||    
T  19690090 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttctttcacgactt--cttttttttagtgcttttttccttggaaa 19690187  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  19690188 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 19690250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 380
Target Start/End: Original strand, 19676326 - 19676676
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  19676326 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 19676424  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgac----tttcannnnnnnnagtgctttttc 221  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||    |||          |||| |||| |    
T  19676425 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttttttttttaagtgtttttcc 19676524  T
Q  222 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaa 321  Q
    |||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| | |||||||                || ||||| ||    
T  19676525 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttttcttattaatttcaaaaatctgcatg------aaaaaagaaactatttct-aa 19676617  T
Q  322 aatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcc 380  Q
    |||||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||||    
T  19676618 aatcatccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatcc 19676676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 31488203 - 31487857
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  31488203 cattccttcaatcatgcatgtttctgagtaatgtgtctcgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31488104  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  31488103 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact----acttttttagtgctttttccctt 31488008  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||     
T  31488007 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaac 31487915  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  31487914 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31487857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 33260608 - 33260965
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| ||| || ||||    
T  33260608 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagtgagagtg 33260706  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact--ttcannnnnnnnagtgcttttt-cc 222  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  ||          |||||||||| ||    
T  33260707 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttttagtgctttttccc 33260806  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg-nnnnnnnnnnnnnnnnctctttctaaa 321  Q
    ||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                 |||||||| ||    
T  33260807 ttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaactctttct-aa 33260904  T
Q  322 aatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  33260905 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 33260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 18792599 - 18792857
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  18792599 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 18792698  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| |||||||||    
T  18792699 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact----gcttttttagtgctttttcccttggaaa 18792794  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  18792795 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 18792857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 35 - 284
Target Start/End: Original strand, 16279445 - 16279695
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||    
T  16279445 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 16279544  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| ||||||||||||||||||            |||||  ||||||||||||||    
T  16279545 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgact---gctttttttagtgccttttttccttggaaa 16279641  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  16279642 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 16279695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 2135582 - 2135323
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  || ||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| |||| |||||    
T  2135582 tcaatcatgcatgtttctgagtaatatacctcgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtggtattt 2135483  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtg-ctttttccttggaaat 230  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| ||||||||||||||||||            |||| |||||| |||||||||    
T  2135482 tctgtaagggcatgtttgtttcggcatggccgttgattaataaaaaattgtcgtttctttcacgact---gctttttttagtgccttttttcttggaaat 2135386  T
Q  231 aatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||| || ||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  2135385 aatggtaatgccagaaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 2135323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 27607228 - 27606968
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  27607228 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 27607129  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-----atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttgga 227  Q
    |||| |||||||||||||||||||||| ||||||     || || |||||   ||||||||| |||||||            |||||||||| |||||||    
T  27607128 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaaaaaatttcgtttcttccacgact----gcttttttagtgctttttcccttgga 27607033  T
Q  228 aataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  27607032 aataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 27606968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 293
Target Start/End: Original strand, 15770487 - 15770742
Alignment:
Q  39 tcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattttctgg 138  Q
    ||||||||||||  ||||||||||| |||||||| | || |||| ||    |||||||||||||||||| |||||||||  ||| ||||| |||  |||     
T  15770487 tcatgcatgttttagagtaatgtgttttgttgctcatgt-ttttcttccaaaaaataacaatcctctcgttctgcccgagacgagagtgacatta-ctgt 15770584  T
Q  139 aagggcatgtttgtttcggcatcgccgttatca--ataaaaatc-gtcgtttctttcacgactttcannnnnnnn-agtgctttttccttggaaataatg 234  Q
    |||||| ||||||||||||||| |||||||| |  ||||||||  ||||||||||||||||| |||          | ||||||| ||||||||||||||    
T  15770585 aagggcgtgtttgtttcggcattgccgttataataataaaaatttgtcgtttctttcacgacattctttttcttttaatgcttttcccttggaaataatg 15770684  T
Q  235 gtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||| ||||||||||||||| ||| | |||||||||||||||||||| | ||||||    
T  15770685 gtaatgccagaaaaaaccaaaacgtctat-tttttcttattaatttcaaaaatctgcat 15770742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 19658256 - 19658193
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||||||||||| |||||||||||    
T  19658256 ctctttctaaaa-tcatccaaccattttacgcagattgagccataataaacccgttgaacacagt 19658193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 382
Target Start/End: Complemental strand, 21374279 - 21374209
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||| ||||| |||||||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  21374279 ctctttttaaaa-tcatccaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 21374209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 18792866 - 18792935
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||| |||||||| ||||||||||||| |||||||||||||| ||||||||||| |||  |||||| |||||    
T  18792866 ctccttctaaaa-tcatccaatcattttacgcagattgaactataataaacccgttgggcacagtaatcct 18792935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 27606956 - 27606891
Alignment:
Q  315 ttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||| |||  |||||| |||||    
T  27606956 ttctaaaa-tcatccaatcattttacgcagattgaactataataaacccgttgggcacagtaatcct 27606891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 2135315 - 2135264
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  2135315 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 2135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 14559785 - 14559836
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  14559785 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 14559836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 16279711 - 16279762
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  16279711 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 16279762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 18711648 - 18711715
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  18711648 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 18711715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 33245670 - 33245733
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| |||| ||| | || |||||||||||| ||||||||||||| |||||||||||    
T  33245670 ctctttctaaaa-tcattcaaccgttttacgcagattgagccataataaacccgttgaacacagt 33245733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 44564164 - 44564231
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  44564164 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 44564231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 16285604 - 16285655
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||  |||||||||||    
T  16285604 ctctttctaaaa-tcatccaaccattttacgcagattgaattataataaaccc 16285655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 19690259 - 19690310
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    ||| |||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  19690259 ctccttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 19690310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 28 - 293
Target Start/End: Original strand, 22890363 - 22890627
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagcgaaagt 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22890363 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctaaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagcgaaagt 22890462  T
Q  127 gatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttg 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |        ||||| ||||||||||    
T  22890463 gatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgttgtttctttcacgactttta---tttttagtgcttttttccttg 22890559  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  22890560 gaaataatggtaatgccagaaaaaaccaaaacatctttatttttcttattaatttcaaaaatctgcat 22890627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 9547975 - 9547698
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9547975 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 9547876  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag-tgctttt 219  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |         | |  ||||    
T  9547875 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttttattttttagtgattttttt 9547776  T
Q  220 tccttggaaataatggtaatgctagaaaaaaccaaaacatcttta----tttttcttattaatttcaaagagctgcat 293  Q
    | |||||||||||||||||||||||||||||||||||||||||||    ||||| |||||||||||||||| ||||||    
T  9547775 ttcttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttttttattattaatttcaaagatctgcat 9547698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 13184081 - 13183795
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13184081 catcatcattccttcaatcatgcatatttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 13183982  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca-------------nnnnn 207  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |                      
T  13183981 gacagtgatattttctgcaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttttatttatttatttatttatt 13183882  T
Q  208 nnnagtgct-ttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
       |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13183881 tttagtgcttttttccttggaaataatggtaatgccagaaaaaaccaaaacatctttatttttcttattaatttcaaagatctgcat 13183795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 35 - 284
Target Start/End: Original strand, 23894107 - 23894353
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23894107 tcaatcatgcatgtttctgagtaatatgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgagagtgatatttt 23894206  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtg-ctttttccttggaaataat 233  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| |        |||| |||||||||||||||||||    
T  23894207 ctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacggctttta---tttttagtgcctttttccttggaaataat 23894303  T
Q  234 ggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  23894304 ggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 23894353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 13439926 - 13439666
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13439926 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 13439827  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttt 219  Q
    || |||||||||||||| |||||||||||||||||||||||||||       ||||||| ||||||||||||||||||||          ||||| ||||    
T  13439826 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccg-------taaaaattgtcgtttctttcacgacttt------ttttagtgcttttt 13439740  T
Q  220 tccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  13439739 tccttggaaataatggtaatgccagaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 13439666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 11326524 - 11326801
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  11326524 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataataatcttctcgctctgcccgaagc 11326623  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttt- 219  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |        |||| ||||     
T  11326624 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgactttta--ttttttagtgattttt 11326721  T
Q  220 ------tccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
          | |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  11326722 tttttcttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 11326801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 28 - 280
Target Start/End: Original strand, 25200923 - 25201179
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25200923 cattccttcaatcatgcatgtttcccagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgacagtg 25201022  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-----tttttcc 222  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||           |||||     |||||||    
T  25201023 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttattatttttttagtgcttttttttttcc 25201122  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaattt 280  Q
    ||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||    
T  25201123 ttggaaataatggtaatgccagaaaaaaccaaaatatctgta-ttttcttattaattt 25201179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 28 - 280
Target Start/End: Original strand, 25265078 - 25265334
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25265078 cattccttcaatcatgcatgtttcccagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgacagtg 25265177  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-----tttttcc 222  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||           |||||     |||||||    
T  25265178 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttattatttttttagtgcttttttttttcc 25265277  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaattt 280  Q
    ||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||    
T  25265278 ttggaaataatggtaatgccagaaaaaaccaaaatatctgta-ttttcttattaattt 25265334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 33878019 - 33878299
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33878019 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 33878118  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtg------- 214  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |        ||||           
T  33878119 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgactttta-tttttttagtgttttttt 33878216  T
Q  215 ----ctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
         ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  33878217 tttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 33878299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 29888472 - 29888295
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  29888472 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgtccgaagcg 29888373  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29888372 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 29888295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 41676603 - 41676944
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  41676603 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 41676701  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgg 226  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||||||| ||||||||||||||||||            ||||| |||| |||||    
T  41676702 atattttctgtaagggcatgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgact---gctttttttagtgcctttttcttgg 41676798  T
Q  227 aaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    ||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||| | ||||||                 |||||||| ||||||    
T  41676799 aaaaaatggtaatgccagaaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat----------aaaaaccctctttct-aaaatc 41676887  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||| |||| |||||||||||||| ||||| ||||| ||||||||||| ||||||    
T  41676888 atccaaccattttacgcagattgaactataatgaacccgttgaacacagtaatccta 41676944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 28 - 381
Target Start/End: Complemental strand, 18373803 - 18373456
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  18373803 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 18373705  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  18373704 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttagtgctttttccctt 18373605  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||||||||    
T  18373604 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttctaaaaat 18373513  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  18373512 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 18373456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 3791435 - 3791780
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3791435 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 3791533  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||| ||||| ||||    
T  3791534 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgttttttccctt 3791630  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  3791631 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 3791722  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  3791723 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 3791780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 28958054 - 28957706
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28958054 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28957956  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||| ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||||||||||  |          |||||||||| ||||    
T  28957955 atatttcctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttctttcacgac--tacttttttttagtgctttttccctt 28957858  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||||||||    
T  28957857 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttctaaaaat 28957764  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| ||||||||||| |||||| ||||||||||| ||||||    
T  28957763 catccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 28957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 37356911 - 37356564
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37356911 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37356813  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||| ||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  37356812 atattttctgtaagggcatgtttgtttcgacattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttagtgctttttccctt 37356713  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || |||||||||||||||||||   |||||||                ||||||||||||||    
T  37356712 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaagtctgcatg--------aaaaaaaactctttctaaaaat 37356622  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  37356621 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37356564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 32594542 - 32594195
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  32594542 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 32594444  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  32594443 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgact---actttttttagtgctttttccctt 32594347  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  32594346 ggaaataatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg----aaaaaaaaaaaactctttct-aaaat 32594253  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  32594252 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 32594195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 43080146 - 43080494
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  43080146 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 43080244  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttcctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        ||||| |||||||||    
T  43080245 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---accttttttagtgcttttttcctt 43080341  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  43080342 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg---gaaaaaaaacaaactctttct-aaaat 43080436  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  43080437 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 43080494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 28651129 - 28651481
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28651129 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28651227  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttcctt 224  Q
    |||||||||| |||||||||||||||||||||| || ||| || |||||||  | |||||||||| |||||||  |         ||||| |||||||||    
T  28651228 atattttctgtaagggcatgtttgtttcggcattgctgttgattaataaaattttgtcgtttcttccacgactacctttttttttagtgcttttttcctt 28651327  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  28651328 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--aaaaaaaaaaaaaactctttct-aaaat 28651423  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  28651424 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28651481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 30170363 - 30170708
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  30170363 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 30170462  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| ||||||||||||||||| | |         |||||  ||| ||||    
T  30170463 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac-tgctttttttttagtgcccttttcttg 30170561  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  30170562 gaaa-aatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaatc 30170651  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  30170652 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 30170708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 37756874 - 37757222
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37756874 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37756972  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| |  |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  37756973 atattttctgtaagggcatgtttgtttcggcattgccgttgactaataaaattttgtcgtttcttccacgactactttttttttaagtgctttttccctt 37757072  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  37757073 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 37757164  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  37757165 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37757222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 40471817 - 40471471
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  40471817 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 40471719  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  40471718 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgctttttccctt 40471620  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  40471619 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 40471529  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  40471528 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 40471471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 34618412 - 34618757
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  34618412 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgatttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 34618510  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||| |||| |||||    
T  34618511 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tacttttttttaagtgtttttcccttg 34618609  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  34618610 gaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaatc 34618700  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  34618701 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34618757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 8663743 - 8663396
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  8663743 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 8663645  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  8663644 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 8663547  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  8663546 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaat 8663454  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  8663453 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 8663396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 37769255 - 37768912
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37769255 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37769157  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  37769156 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tactttttttaagtgctttttccctt 37769059  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  37769058 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg---------aaaaaaactctttct-aaaat 37768970  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  37768969 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37768912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 293
Target Start/End: Original strand, 2512945 - 2513206
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  ||||||||||||||||||||||||||||||||| | ||    
T  2512945 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccgaagcgacaatg 2513044  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgg 226  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||||||||| |||||||||||||||||| |          ||||| |||| |||||    
T  2513045 atattttctgtaagggcgtgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgactgt----ttttttagtgcctttttcttgg 2513140  T
Q  227 aaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | ||||||    
T  2513141 aaaaaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcat 2513206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 391
Target Start/End: Original strand, 26482285 - 26482642
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||||||||||||| ||||||| |||||| ||||    
T  26482285 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgttctgcccaaagcgagagtg 26482384  T
Q  128 ata-ttttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttcctt 224  Q
    ||| ||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||  |          ||||| |||| |||    
T  26482385 atatttttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac--tgctttttttaagtgcctttttctt 26482482  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                ||||||||||||||    
T  26482483 ggaaa-aatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttctaaaaat 26482575  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||| |||||    
T  26482576 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgcctcttc 26482642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 28 - 294
Target Start/End: Original strand, 12134049 - 12134314
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  12134049 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 12134148  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| ||||||||||||||||| | |         ||||| |||| ||||    
T  12134149 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac-tgctttttttttagtgcctttttcttg 12134247  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||    
T  12134248 gaaa-aatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaacctgcatg 12134314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 15757125 - 15756773
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  15757125 cattccttcaataatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 15757026  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact-ttcannnnnnnnagtgcttttt-cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||| ||          |||||||||| |||    
T  15757025 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactattttttttttttagtgctttttccct 15756926  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||  ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  15756925 tggaaacaatggtaatgccagaaaaaaccaaaatgtctgta-ttttcttattaatttcaaaaatctgcatg----aaaaaaaaaaaactctttct-aaaa 15756832  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  15756831 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 15756773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 24725861 - 24726208
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  24725861 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24725959  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact-ttcannnnnnnnagtgctttttcctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |          |||| |||| ||||    
T  24725960 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttaagtgtttttccctt 24726059  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| | ||||||                 || ||||| |||||    
T  24726060 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttttcttattaatttcaaaaatctgcat--------aaaaagaaactatttct-aaaat 24726150  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||||||    
T  24726151 catccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 24726208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 33779388 - 33779650
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  33779388 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 33779487  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc---tttttccttggaa 228  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||  |          |||||   ||||| |||||||    
T  33779488 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac--tgcttttttttagtgccttttttttcttggaa 33779585  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  33779586 ataatggtaatgccagaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 33779650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 28 - 294
Target Start/End: Original strand, 9319345 - 9319612
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  9319345 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 9319444  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgact-ttcannnnnnnnagtgctttttcctt 224  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| ||||||||||||||||||  |          ||||| |||| |||    
T  9319445 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgactgctttttttttttagtgcctttttctt 9319544  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||    
T  9319545 ggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaacctgcatg 9319612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 37669751 - 37669407
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37669751 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37669653  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  37669652 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 37669555  T
Q  225 ggaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    ||||| ||||||||||| || ||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  37669554 ggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg---------aaaaaaactctttct-aaaa 37669466  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||| |||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  37669465 tcatccaatcagtatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37669407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 24683334 - 24683681
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  24683334 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24683432  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||| |||| |||||    
T  24683433 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttttttaagtgtttttcccttg 24683532  T
Q  226 gaaataatggtaatgctagaaaaaacc-aaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    |||| ||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||| | ||||||                 || ||||| |||||    
T  24683533 gaaacaatggtaatgccagaaaaaaccaaaaacgtctgtatttttcttattaatttcaaaaatctgcat--------aaaaagaaactatttct-aaaat 24683623  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||||||    
T  24683624 catccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 24683681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 22997375 - 22997116
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  22997375 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 22997276  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| |||||||||    
T  22997275 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gcttttttaagtgctttttcccttggaaa 22997179  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  22997178 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 22997116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 28 - 294
Target Start/End: Original strand, 30153912 - 30154177
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  30153912 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 30154010  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  30154011 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 30154108  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||    
T  30154109 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg 30154177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 28 - 375
Target Start/End: Complemental strand, 13323097 - 13322758
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| ||||||  |||    
T  13323097 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtg 13322999  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||| | |||||| || |||||||  | |||||||||| |||||| | |         || ||||||| ||||    
T  13322998 atattttctgtaagggcatgtttgtttcggcgttgccgttgattaataaaattttgtcgtttcttccacgac-tacttttttttaagagctttttccctt 13322900  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  13322899 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 13322809  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  13322808 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 13322758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 18498998 - 18498646
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| |||||| ||||    
T  18498998 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcactctgcccaaagcgagagtg 18498900  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact-ttcannnnnnnnagtgcttttt-cct 223  Q
     ||||||||| || ||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |          |||||||||| |||    
T  18498899 gtattttctgtaaaggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttttttttagtgctttttccct 18498800  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                | |||||| ||||    
T  18498799 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg---aaaaaaaaaaactccctttct-aaaa 18498705  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  18498704 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18498646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 30031309 - 30031667
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  30031309 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 30031407  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||| |          |||||||||| ||||    
T  30031408 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactat--ttttttttagtgctttttccctt 30031505  T
Q  225 ggaaataatggtaatgctag---aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg---nnnnnnnnnnnnnnnnctctttct 318  Q
    ||||| ||||||||||| ||   ||||||||||||| ||| || ||||||||||||||||||| | |||||||                   ||||||||    
T  30031506 ggaaacaatggtaatgccagaaaaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaactctttct 30031604  T
Q  319 aaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
     |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  30031605 -aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 30031667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 381
Target Start/End: Original strand, 5639681 - 5640026
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| ||| || ||||    
T  5639681 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagtgagagtg 5639779  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccg-ttatcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt--cct 223  Q
    |||||||||| |||||||||||||||||||||| |||| | || |||||||  | |||||||||| ||||||  |          ||||||||||  |||    
T  5639780 atattttctgtaagggcatgtttgtttcggcattgccgctgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgcttttttccct 5639877  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||||| | || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  5639878 tggaaacaatggtaatgccagaaaaaaccaaaacatttgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaa 5639968  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  5639969 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 5640026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 31824675 - 31824328
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||| | || || ||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  31824675 cattccttcaatcatgcatgtttctgagtagtgtgtcttgttgctttaatgcttcgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 31824577  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||| |||| |||||    
T  31824576 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgtttttcccttg 31824479  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | ||||||                 |||||||| ||||||    
T  31824478 gaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcat----aaaaaaaaaaaaactctttct-aaaatc 31824385  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  31824384 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31824328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 18125656 - 18125399
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 132  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||  ||||||||||||||||| ||||||||| |||||| |||||||||    
T  18125656 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaatcctcttgctctgcccaaagcgagagtgatatt 18125557  T
Q  133 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaa 228  Q
    ||||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| ||||||||    
T  18125556 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact------gcttttagtgctttttcccttggaa 18125463  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    || |||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  18125462 atgatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 18125399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 35 - 382
Target Start/End: Original strand, 6876206 - 6876544
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||| ||||||  ||| ||||||    
T  6876206 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagttctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtggtatttt 6876304  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttggaaataa 232  Q
    ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||| |||| ||||||||| ||    
T  6876305 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgtttttcccttggaaacaa 6876402  T
Q  233 tggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcatccaa 331  Q
    ||||||||| || ||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||||||||    
T  6876403 tggtaatgccagaaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaatcatccaa 6876493  T
Q  332 tcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| |||| ||||||||||| |||||| ||||||||||| ||||||    
T  6876494 tcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 6876544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 15657021 - 15656757
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  15657021 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 15656922  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgcttttt---ccttggaaa 229  Q
    ||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||| ||||||||| |          |   ||||||   |||||||||    
T  15656921 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttccttcacgactgtttcttttttaatgcctttttttcccttggaaa 15656822  T
Q  230 taatggtaatgctagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagagctgcat 293  Q
     ||||||||||| ||||||||||||||||||| || |||||||||||||||||||| | ||||||    
T  15656821 caatggtaatgccagaaaaaaccaaaacatctgtattttttcttattaatttcaaaaatctgcat 15656757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 30936534 - 30936796
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt--tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 132  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||  |||||||||||| |||| |||||||||| |||||| |||||||||    
T  30936534 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaaacctcccgctctgcccaaagcgagagtgatatt 30936633  T
Q  133 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttggaaa 229  Q
    ||||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||   |          |  ||||||||||||||    
T  30936634 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgactgctatttttagtgcttttttttccttggaaa 30936733  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  30936734 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 30936796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 33294426 - 33294689
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| ||||||||||||||||||||||||| || |||||| ||||||||||    
T  33294426 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgtccaaagcgagagtgatattt 33294525  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgact-ttcannnnnnnnagtgctttttccttggaaa 229  Q
     ||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||  |            |  ||||||||||||||    
T  33294526 gctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgactgctttttttagtaccttttttttccttggaaa 33294625  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| | ||||||    
T  33294626 taatggtaatgccagaaaaaaccaaaacatctgtatttttcttattgatttcaaaaatctgcat 33294689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 35 - 167
Target Start/End: Complemental strand, 23716249 - 23716117
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  23716249 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 23716150  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt 167  Q
    ||| |||||||||||||||||||||| ||||||    
T  23716149 ctgtaagggcatgtttgtttcggcattgccgtt 23716117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 31433334 - 31433505
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| ||||||  |||    
T  31433334 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtg 31433432  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact 198  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||    
T  31433433 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact 31433505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 33518250 - 33518421
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  33518250 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 33518348  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact 198  Q
    |||||||||| |||||||||||||||||| ||| |||||| || |||||||  | |||||||||| |||||||    
T  33518349 atattttctgtaagggcatgtttgtttcgacattgccgttgattaataaaattttgtcgtttcttccacgact 33518421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 284
Target Start/End: Original strand, 11551255 - 11551508
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-----aaaataacaatcctctcgctctgcccgaagcgaaagtgat 129  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||      |||||||||||||||||||||||||| |||||| ||||||    
T  11551255 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttttcaaaaataacaatcctctcgctctgcccaaagcgagagtgat 11551354  T
Q  130 attttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttgg 226  Q
    |||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||||    
T  11551355 attttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---gcttttttaagtgctttttcccttgg 11551451  T
Q  227 aaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||||||||||||||| |||||||||||||||| |  || |||||||||||||||||||    
T  11551452 aaataatggtaatgccagaaaaaaccaaaacacccgta-ttttcttattaatttcaaa 11551508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 198
Target Start/End: Complemental strand, 24686418 - 24686250
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  24686418 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 24686319  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa---tcgtcgtttctttcacgact 198  Q
    |||| ||||||| |||||||||||||| |||||| || ||||||||   | ||||||||||||||||||    
T  24686318 tctgtaagggcacgtttgtttcggcattgccgttgattaataaaaaattttgtcgtttctttcacgact 24686250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 24971919 - 24972052
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  24971919 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 24972018  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt 167  Q
    |||| ||||||| |||||||||||||| ||||||    
T  24972019 tctgtaagggcacgtttgtttcggcattgccgtt 24972052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 29888266 - 29888188
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29888266 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttattaatttcaaagatctgcatg 29888188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 23628054 - 23628121
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  23628054 tttttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 23628121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 211 - 375
Target Start/End: Original strand, 31433540 - 31433696
Alignment:
Q  211 agtgctttttcc-ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnn 309  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                   
T  31433540 agtgctttttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaa 31433631  T
Q  310 nctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
     |||||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  31433632 actctttct-aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 31433696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 24686221 - 24686145
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| | ||||||    
T  24686221 ttttttcttggaaataatggtaatgccagaaaaaaccaaaacatctgtatttt-cttattaatttcaaaaatctgcat 24686145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 9319645 - 9319724
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||| |||||    
T  9319645 ctctttctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgcctcttc 9319724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 12134344 - 12134423
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||| |||||    
T  12134344 ctctttctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgcctcttc 12134423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 375
Target Start/End: Original strand, 33518455 - 33518612
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctt 315  Q
    |||| ||||||||| ||||||||||| ||||||||||||||| ||| |||||| ||||||||||||||| | |||||||                |  ||    
T  33518455 ttttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt-cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaccattt 33518553  T
Q  316 tctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  33518554 tctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 33518612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 2513231 - 2513300
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  2513231 ctctttctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 2513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 30154209 - 30154270
Alignment:
Q  321 aaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  30154209 aaatcatccaaccattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 30154270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 9547676 - 9547614
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||| |||| || |||| |||||||||||||||||| || |||||||| ||||||    
T  9547676 aaaatcatccaaccattctatgcagtttgaaccataataaacccgttaaacacagtaatccta 9547614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 11326830 - 11326892
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  11326830 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 11326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 13183759 - 13183697
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  13183759 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 13183697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 384
Target Start/End: Complemental strand, 18125388 - 18125319
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatg 384  Q
    ||||||||| |||| |||||||| || |||  |||||||||||||||||| ||||||||||| ||||||||    
T  18125388 tttctaaaa-tcattcaatcattctatgcaatttgaaccataataaacccgttgaacacagtaatcctatg 18125319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 23628138 - 23628207
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||||||| |||  |||||| |||||    
T  23628138 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 23628207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 33294697 - 33294766
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| ||||||||||||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  33294697 ctctttctaaaa-tcatccaatcattttacgcagattgaactataatgaacccgttgggcacagtaatcct 33294766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 11551524 - 11551575
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  11551524 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 11551575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 13439655 - 13439588
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  13439655 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 13439588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 24972075 - 24972126
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  24972075 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 24972126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 33878319 - 33878386
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  33878319 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 33878386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 15656749 - 15656680
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  15656749 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 15656680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 23750711 - 23750653
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa 93  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||    
T  23750711 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttaaaa 23750653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 33779658 - 33779727
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  33779658 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 33779727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 23894375 - 23894423
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaa 360  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||||||||    
T  23894375 ctctttctaaaa-tcatccaaccattttacgcagattgagccataataaa 23894423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 29888169 - 29888109
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| |||||||||||    
T  29888169 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagt 29888109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 22997104 - 22997057
Alignment:
Q  315 ttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||| ||||| ||||||| |||||||||||||| |||||||||||    
T  22997104 ttctaaaa-tcatctaatcattttacgcagattgaactataataaaccc 22997057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 30936805 - 30936856
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| |||||    
T  30936805 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaaccc 30936856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 27393440 - 27393708
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27393440 catcaacattccttcaatcatgcataattccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 27393539  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-ttttt 220  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| |        ||||| |||||    
T  27393540 aaagtgata-tttctggaagggcgtgtttgtttcggcattgccgttattaataaaaatcgtcgtttctttcacggctttta---tttttagtgctttttt 27393635  T
Q  221 ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27393636 ccttggaaataatggtaatgccagaaaaaaccaaaacatctttatttttcttattaatttcaaagatctgcat 27393708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 28 - 293
Target Start/End: Complemental strand, 21701524 - 21701262
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21701524 cattccttcaatcatgcatgtttccgagtaatgtgttttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 21701425  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgga 227  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |        |||||||||| ||||||    
T  21701424 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacgactttta---tttttagtgcttttt-cttgga 21701329  T
Q  228 aataatggtaatgctag--aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||| ||  ||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  21701328 aataatggtaatgccagaaaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 21701262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 31890852 - 31890576
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||    
T  31890852 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttatgtgttttgtttttcaaaaataacaatcctctcactctgcccgaagc 31890753  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca--nnnnnnnnagtgc--t 216  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |          |||||  |    
T  31890752 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttttattttttttttagtgcttt 31890653  T
Q  217 ttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  31890652 tttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 31890576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 22925510 - 22925233
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22925510 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 22925411  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgct----- 216  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |        |||| |         
T  22925410 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgactttta--ttttttagtgatttttt 22925314  T
Q  217 ----ttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
        |||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  22925313 tttctttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 22925233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 28 - 284
Target Start/End: Complemental strand, 19454782 - 19454527
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19454782 cattccttcaatcatgcatgtttccgagtagtgtgtcttgttgcttaagtgttctgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 19454683  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttg 225  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||  ||| |        ||||| ||||||||||    
T  19454682 atattttctgtaagggcatgtttgtttcagcatcgccgttattaataaaaaatcgtcgtttttttcacggttttta--ttttttagtgcttttttccttg 19454585  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  19454584 gaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 19454527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 16164362 - 16164642
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16164362 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 16164461  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag--------- 212  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |         |             
T  16164462 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 16164560  T
Q  213 -tgctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
     |  ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  16164561 ttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 16164642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 34157727 - 34158006
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34157727 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 34157826  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag--------- 212  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |         |             
T  34157827 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 34157925  T
Q  213 tgctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |  ||||| |||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  34157926 tctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttattttttttatcaatttcaaagaactgcat 34158006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 27119405 - 27119584
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27119405 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 27119504  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  27119505 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttt 27119584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 3785371 - 3785548
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3785371 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 3785470  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  3785471 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 3785548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 34288235 - 34288580
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||| |||| || |||| |||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  34288235 cattccttcaatcatgcatgtttccgagtaatgtgtctcgttggtttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagagaaagtg 34288333  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgg 226  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||||||| ||||||||||||||||| | |         ||||| |||| |||||    
T  34288334 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgac-tgcttttttattagtgcctttttcttgg 34288432  T
Q  227 aaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatca 326  Q
    ||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||||||||||    
T  34288433 aaaaaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttctaaaaatca 34288524  T
Q  327 tccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  34288525 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34288580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 34293295 - 34293640
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||| |||| || |||| |||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  34293295 cattccttcaatcatgcatgtttccgagtaatgtgtctcgttggtttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagagaaagtg 34293393  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgg 226  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||||||| ||||||||||||||||| | |         ||||| |||| |||||    
T  34293394 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgac-tgcttttttattagtgcctttttcttgg 34293492  T
Q  227 aaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatca 326  Q
    ||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||||||||||    
T  34293493 aaaaaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttctaaaaatca 34293584  T
Q  327 tccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  34293585 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34293640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 28 - 200
Target Start/End: Original strand, 27779103 - 27779275
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagcgaaagt 126  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  27779103 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataaccatcctctcgctctgcccgaagcgaaagt 27779202  T
Q  127 gatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    |||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  27779203 gata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 27779275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 28 - 200
Target Start/End: Original strand, 27818861 - 27819033
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagcgaaagt 126  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  27818861 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataaccatcctctcgctctgcccgaagcgaaagt 27818960  T
Q  127 gatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    |||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  27818961 gata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 27819033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 11633545 - 11633197
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  11633545 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 11633446  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgg 226  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||||||||| |||||||||||||||||  |          ||||| |||| |||||    
T  11633445 atattttctgtaagggcgtgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgac--tgcttttttttagtgcctttttcttgg 11633348  T
Q  227 aaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    ||| ||||||||||| || ||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||||||||||    
T  11633347 aaa-aatggtaatgccagaaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg----aaaaaaaaaaaactctttctaaaaatc 11633254  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  11633253 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 11633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 37949682 - 37949335
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37949682 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37949584  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  |||||||||||| |||||||  |         | |||||||| ||||    
T  37949583 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaatttcgtcgtttcttccacgactacc--tttttttaatgctttttccctt 37949486  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  37949485 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaat 37949393  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  37949392 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37949335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 12588691 - 12589039
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  12588691 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 12588789  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  12588790 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgact---actttttttagtgctttttccctt 12588886  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  12588887 ggaaataatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg---aaaaaaaaaaaaactctttct-aaaat 12588981  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  12588982 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 12589039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 13934904 - 13934560
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  13934904 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 13934806  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  13934805 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgact---actttttttagtgctttttccctt 13934709  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  13934708 ggaaataatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 13934618  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  13934617 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 13934560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 27805588 - 27805934
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  27805588 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 27805686  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| | |||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  27805687 atattttctgtaagggcatgtttgtttcggcattgncgttgattaataaaactttgtcgtttcttccacgact---actttttttagtgctttttccctt 27805783  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  27805784 ggaaataatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaat 27805876  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  27805877 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27805934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 28 - 375
Target Start/End: Original strand, 39891955 - 39892293
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  39891955 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 39892053  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  39892054 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---accttttttagtgctttttccctt 39892150  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  39892151 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 39892242  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  39892243 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 39892293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 9348342 - 9347999
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  9348342 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 9348244  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  9348243 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgact---actttttttagtgctttttccctt 9348147  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    || |||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| |  ||||||                || ||||| |||||    
T  9348146 gggaataatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatttgcatg--------aaaaaaaactttttct-aaaat 9348057  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  9348056 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 9347999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 39050182 - 39049832
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  39050182 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 39050084  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  39050083 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 39049986  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  39049985 ggaaataatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--aaaaaaaaaaaaaactctttct-aaaat 39049890  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  39049889 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 39049832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 259113 - 258766
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  259113 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 259015  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  259014 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgctttttccctt 258916  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  258915 ggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 258824  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  258823 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 258766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 12714962 - 12714614
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  12714962 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 12714864  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact-ttcannnnnnnnagtgctttttcctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |          |||| |||| ||||    
T  12714863 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttaagtgtttttccctt 12714764  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| | |||||||                || ||||| |||||    
T  12714763 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttttcttattaatttcaaaaatctgcatg-------aaaaagaaactatttct-aaaat 12714672  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||||||    
T  12714671 catccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 12714614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 21675542 - 21675188
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  21675542 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 21675444  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  21675443 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 21675346  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg--nnnnnnnnnnnnnnnnctctttctaaaa 322  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                  |||||||| |||    
T  21675345 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaactctttct-aaa 21675248  T
Q  323 atcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  21675247 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 21675188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 34863561 - 34863915
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  34863561 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 34863659  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgac-----tttcannnnnnnnagtgcttttt 220  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||     |||          ||||||||||    
T  34863660 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttttttttttttagtgcttttt 34863759  T
Q  221 -ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttcta 319  Q
     ||||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||     
T  34863760 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct- 34863852  T
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  34863853 aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34863915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 37927251 - 37927600
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37927251 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 37927349  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  37927350 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 37927447  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  37927448 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg---aaaaaaaaaaaaactctttct-aaaat 37927542  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  37927543 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37927600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 381
Target Start/End: Complemental strand, 16827698 - 16827352
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  16827698 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16827600  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  16827599 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 16827502  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  16827501 ggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaat 16827409  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  16827408 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 16827352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 381
Target Start/End: Original strand, 16893783 - 16894128
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  16893783 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16893881  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  16893882 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 16893979  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  16893980 ggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 16894071  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  16894072 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 16894128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 28 - 375
Target Start/End: Complemental strand, 19414859 - 19414521
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  19414859 cattccttcaatcatgcatgtttttgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 19414761  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    || ||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  19414760 atgttttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 19414664  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  19414663 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 19414572  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  19414571 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 19414521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 35 - 382
Target Start/End: Original strand, 40235399 - 40235739
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt--tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 132  Q
    |||||||||||| |||| ||||||| |  |||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  40235399 tcaatcatgcatatttctgagtaatataccttgttgcttaagtgtcttgtttttttcaaaataacaatcctctcgctctgcccaaagcgaaagtgatatt 40235498  T
Q  133 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    ||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| |||||||||    
T  40235499 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttctttagtgctttttcccttggaaa 40235596  T
Q  230 taatggtaatgctagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcatc 328  Q
     ||||||||||| ||||||||||||||| ||| || |||||||||||||||||||| | |||||||                |||||||| |||||||||    
T  40235597 caatggtaatgccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----------aaaaaactctttct-aaaatcatc 40235685  T
Q  329 caatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  40235686 caatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 40235739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 31878162 - 31878517
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  31878162 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 31878260  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacg---actttcannnnnnnnagtgcttttt-c 221  Q
    |||||||||| |||||| ||||||||||||||| |||||| || |||||||  | |||||||||| ||||   |||||          |||||||||| |    
T  31878261 atattttctgtaagggcgtgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttctttttttagtgctttttcc 31878360  T
Q  222 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaa 321  Q
    |||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||    
T  31878361 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--aaaaaaaaaaaaaactctttct-aa 31878456  T
Q  322 aatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    || ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  31878457 aaccatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31878517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 37684269 - 37684004
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37684269 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37684171  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |         |||||||||| ||||    
T  37684170 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacc--tttttttagtgctttttccctt 37684073  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||    
T  37684072 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg 37684004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 37699534 - 37699269
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37699534 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37699436  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |         |||||||||| ||||    
T  37699435 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacc--tttttttagtgctttttccctt 37699338  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||    
T  37699337 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg 37699269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 35 - 284
Target Start/End: Complemental strand, 23126919 - 23126668
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  23126919 tcaatcatgcatgtttctgagtaatgtaccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 23126820  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||  |          |||||  ||||||||||||||    
T  23126819 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac--tgcttttttttagtgccttttttccttggaaa 23126722  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||| |||||||||||||| |||| || |||||||||||||||||||    
T  23126721 taatggtaatgccagaaaaaaccaaaatatctgta-ttttcttattaatttcaaa 23126668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 34302827 - 34302700
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 120  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34302827 catcatcattccctcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 34302728  T
Q  121 gaaagtgatattttctggaagggcatgt 148  Q
    || |||||||||||||| ||||||||||    
T  34302727 gacagtgatattttctgtaagggcatgt 34302700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 5807170 - 5807291
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5807170 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 5807269  T
Q  121 gaaagtgatattttctggaagg 142  Q
    || |||||||||||||| ||||    
T  5807270 gacagtgatattttctgtaagg 5807291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 375
Target Start/End: Original strand, 32051679 - 32052027
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  32051679 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 32051777  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatc-gtcgtttctttcacgactttcannnnnnnnagtgcttttt----- 220  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||||| |  |||||||||| |||||||  |         ||||||||||         
T  32051778 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgacta-ctttttttttagtgctttttttttc 32051876  T
Q  221 ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaa 320  Q
    ||||||||| ||||||||||| ||||||||||||||| ||| |||||| ||||||||||||||| | |||||||                |  |||||||    
T  32051877 ccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt-cttattaatttcaaaaatctgcatgaaaaaaaaaaaaac--cattttctaa 32051973  T
Q  321 aaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    || |||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  32051974 aa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 32052027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 27432797 - 27432532
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  27432797 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 27432698  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa---tcgtcgtttctttcacgact--ttcannnnnnnnagtgc-tttttccttgg 226  Q
    |||| ||||||| |||||||||||||| |||||| || ||||||||   | ||||||||||||||||||  |           ||||| ||||| |||||    
T  27432697 tctgtaagggcacgtttgtttcggcattgccgttgattaataaaaaaatttgtcgtttctttcacgactgctattttttttttagtgctttttttcttgg 27432598  T
Q  227 aaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||| | ||||||    
T  27432597 aaataatggtaatgccagaaaaaaccaaaacatctgta-tcttcttattaatttcaaaaatctgcat 27432532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 28884102 - 28884360
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||  |||||||||||| ||||||||||||| |||||| ||||||||||    
T  28884102 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 28884201  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaa 228  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | ||||||||||||||||||            ||| |  ||||| |||||||    
T  28884202 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttctttcacgact-----gctttttagtacctttttttcttggaa 28884296  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  28884297 ataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 28884360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 12657430 - 12657689
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| ||||||  |||||||||    
T  12657430 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagcgtgatattt 12657529  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||              ||| ||||||||||||||    
T  12657530 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact----gctttttttatgcttttttccttggaaa 12657625  T
Q  230 taatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| || ||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  12657626 taatggtaatgccagaaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 12657689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 382
Target Start/End: Original strand, 37377049 - 37377402
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt----tcaaaataacaatcctctcgctctgcccgaagcgaaagtgata 130  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||  ||||||||    |||||||||||||||||||||||||||| |||||| |||||||    
T  37377049 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtactttgtttttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgata 37377148  T
Q  131 ttttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttgga 227  Q
    ||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| |||||||    
T  37377149 ttttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttcccttgga 37377245  T
Q  228 aataatggtaatgctagaaaaaaccaaaacatc-------tttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaa 320  Q
    || ||||||||||| ||||||||||||||| ||       ||| | |||||||||||||||||| | |||||||                |||||||| |    
T  37377246 aacaatggtaatgccagaaaaaaccaaaacgtctgttttttttttctttcttattaatttcaaaaatctgcatg----aaaaaaaaaaaactctttct-a 37377340  T
Q  321 aaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||| ||||||    
T  37377341 aaatcatccaatcattatatgcaggttgaaccataataaacccgttgaaaacagtaatccta 37377402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 20839789 - 20839922
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  20839789 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 20839888  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt 167  Q
    |||| |||||||||||||||||||||| ||||||    
T  20839889 tctgtaagggcatgtttgtttcggcattgccgtt 20839922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 3785575 - 3785652
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  3785575 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 3785652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 27779317 - 27779394
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27779317 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 27779394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 27819074 - 27819151
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27819074 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 27819151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 20839989 - 20840065
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  20839989 ttttcccttggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 20840065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 34272039 - 34271982
Alignment:
Q  143 gcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  34272039 gcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttt 34271982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 34271940 - 34271873
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||| |||||||||    
T  34271940 tttttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttatcaatttcaaa 34271873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 311 - 382
Target Start/End: Complemental strand, 37683978 - 37683908
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  37683978 ctctttctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37683908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 311 - 382
Target Start/End: Complemental strand, 37699243 - 37699173
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  37699243 ctctttctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37699173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 27119625 - 27119683
Alignment:
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  27119625 ggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 27119683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 3785673 - 3785740
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| |||||||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  3785673 tttctaaaa-tcattcaatcattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 3785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 22925212 - 22925145
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| |||||||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  22925212 tttctaaaa-tcattcaatcattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 22925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 375
Target Start/End: Original strand, 27393731 - 27393786
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||| ||| |||| ||||||| |||||||||||||||||| |||||||||||    
T  27393731 aaaatcattcaaccattctacgcagtttgaaccataataaacccgttgaacacagt 27393786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 23126651 - 23126582
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||||||| |||  |||||| |||||    
T  23126651 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 23126582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 27119709 - 27119771
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  27119709 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27119771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 28884368 - 28884437
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||||||| |||  |||||| |||||    
T  28884368 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 28884437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 12657697 - 12657748
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  12657697 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 12657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 16164660 - 16164727
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  16164660 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 16164727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 21701253 - 21701202
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||| |||||||||||||||    
T  21701253 ctctttctaaaa-tcatccaaccattttacgcagattaaaccataataaaccc 21701202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 27432524 - 27432473
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  27432524 ctctttctaaaa-tcatccaaccattttacgcagattgaacgataataaaccc 27432473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 27779414 - 27779481
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  27779414 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27779481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 27819171 - 27819238
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  27819171 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27819238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 31890555 - 31890488
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  31890555 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31890488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 34158024 - 34158091
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  34158024 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 34158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 34271856 - 34271793
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| |||||||| |||| ||| ||||| || ||||||||||||| |||||||||||    
T  34271856 ctctttctaaaa-tcatccaaccattttactcagatggagccataataaacccgttgaacacagt 34271793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 19454506 - 19454455
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||| |||||||    
T  19454506 ctctttctaaaa-tcatccaaccattttacgcagattgagccatagtaaaccc 19454455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 20840074 - 20840125
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| |||||    
T  20840074 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaaccc 20840125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 7e-99; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 28163375 - 28163651
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa--taacaatcctctcgctctgcccgaag 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  28163375 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaaataacaatcctctcgctctgcccgaag 28163474  T
Q  120 cgaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca--nnnnnnnnagtgc-t 216  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |          ||||| |    
T  28163475 cgacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttttattttttttttagtgctt 28163574  T
Q  217 ttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  28163575 ttttccttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 28163651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 28 - 293
Target Start/End: Complemental strand, 22456418 - 22456152
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  22456418 cattcattcaatcatgcatgtttccgagtaatatgtcttgttgctaaagtgttttgtttttcaaaataacaatcctctcgttctgttcgaagcgaaagtg 22456319  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttgg 226  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |        ||||| |||||||||||    
T  22456318 atattttctgtaagggcatgtttgtttcggcatcgccgtttttaataaaaatcgtcgtttctttcacgacttttattttttttagtgcttttttccttgg 22456219  T
Q  227 aaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||| || |||||||| ||||||    
T  22456218 aaataacggtaatgccagaaaaaaccaaaacatcttcatttttcttatcaacttcaaagatctgcat 22456152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 26788703 - 26788975
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26788703 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 26788802  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca--nnnnnnnnagtgctttt 219  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |          | |  ||||    
T  26788803 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttatcaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 26788901  T
Q  220 tccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    | |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  26788902 ttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 26788975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 27252164 - 27251892
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27252164 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27252065  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca--nnnnnnnnagtgctttt 219  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |          | |  ||||    
T  27252064 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttatcaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 27251966  T
Q  220 tccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    | |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27251965 ttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 27251892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 27197076 - 27197345
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27197076 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27197175  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttc 221  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |         |   |||||     
T  27197176 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttatcaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 27197274  T
Q  222 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||||||| | || ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27197275 cttggaaataatggtaataccag-aaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 27197345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 28 - 391
Target Start/End: Complemental strand, 27288684 - 27288319
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  27288684 cattccttcaatcatgcatgtttccgagtaatatgtcttgttgctttagtgctttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtg 27288585  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat--aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttcctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||  |||||| ||||||||||||||||||            ||||| |||| |||    
T  27288584 atattttctgtaagggcatgtttgtttcggcattgccgttgatgaataaaaaaattgtcgtttctttcacgactgcttttttttttagtgcctttttctt 27288485  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg-nnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | |||||||                 |||||||| ||||    
T  27288484 ggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaactctttct-aaaa 27288387  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27288386 tcatccaatcattatatgcaggttgaaccataataaaccccttgaacacagtgatcctatgcttcttc 27288319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 8891789 - 8891508
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8891789 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 8891690  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag-------- 212  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |         |            
T  8891689 gaaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgattttttt 8891591  T
Q  213 --tgctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
      |  ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  8891590 tttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 8891508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 8903024 - 8902743
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8903024 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 8902925  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag-------- 212  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |         |            
T  8902924 gaaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgattttttt 8902826  T
Q  213 --tgctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
      |  ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  8902825 tttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 8902743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 13521509 - 13521229
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13521509 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 13521410  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtg------- 214  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |        ||||           
T  13521409 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgactttta-tttttttagtgttttttt 13521312  T
Q  215 ----ctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
         ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  13521311 tttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 13521229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 27359427 - 27359147
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27359427 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27359328  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag--------- 212  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |         |             
T  27359327 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 27359229  T
Q  213 -tgctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
     |  ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27359228 ttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 27359147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 27449770 - 27449490
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27449770 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27449671  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag--------- 212  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |         |             
T  27449670 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 27449572  T
Q  213 -tgctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
     |  ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27449571 ttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 27449490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 22 - 382
Target Start/End: Complemental strand, 33373734 - 33373381
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33373734 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 33373635  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtg-ctt 217  Q
    || |||||||||||||| |||||||||||||||||||||| ||||||  | ||| |||||| ||||||||||||||||||            |||| |||    
T  33373634 gacagtgatattttctgtaagggcatgtttgtttcggcattgccgttggttaataaaaaattgtcgtttctttcacgactacttttttttttagtgcctt 33373535  T
Q  218 tttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttc 317  Q
    ||| |||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||| | ||||||                 |||||||    
T  33373534 ttttcttggaaataatggtaatgccagaaaaaaccaaaaaatctgtatttttcttattaatttcaaaaatctgcat----------aaaaaacctctttc 33373445  T
Q  318 taaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    | |||||||||||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  33373444 t-aaaatcatccaaccattttatgcagtttgaaccataataaacccgttgaacacagtaatccta 33373381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 14142721 - 14142544
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14142721 catcaacattcattcaatcatgcatgtttccgaataatgcgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 14142622  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  14142621 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 14142544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 28209336 - 28209683
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  28209336 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 28209435  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  28209436 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 28209532  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||||||||    
T  28209533 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttctaaaaat 28209625  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  28209626 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28209683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 28 - 391
Target Start/End: Complemental strand, 27270894 - 27270542
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  27270894 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27270796  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttg 225  Q
    ||||||| || |||||||||||||||||||||| |||||| || ||||||||| ||||||||||||||||| | |         ||||| ||||| ||||    
T  27270795 atattttatgtaagggcatgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgac-tgcttttttttaagtgctttttttcttg 27270697  T
Q  226 gaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    |||||||||||||||| || ||||||||||||||||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  27270696 gaaataatggtaatgccagaaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcatg----------aaaaaactctttct-aaaat 27270609  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||||||| ||||    
T  27270608 catccaatcattatatgcaggttgaaccataataaacccattgaacacagtaatcctatgctccttc 27270542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 28 - 391
Target Start/End: Complemental strand, 27628020 - 27627666
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  27628020 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 27627922  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttg 225  Q
    |||||||||| ||||||  |||||||||||||| |||||| || ||||||||| ||||||||||||||||||            ||||| ||||||||||    
T  27627921 atattttctgtaagggcgcgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgactgctttttttttaagtgcttttttccttg 27627822  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||||||||||||| | ||||||||||||||||||| || ||||||||||||||||||| | | |||||                |||||||| ||||||    
T  27627821 gaaataatggtaataccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaacccgcatg--------aaaaaaaactctttct-aaaatc 27627732  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||| ||| ||||||||| |||||    
T  27627731 atccaatcattatatgcaggttgaaccataataaacccattgaacatagtaatcctatgcctcttc 27627666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 26775924 - 26775578
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26775924 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26775826  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  26775825 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgctttttccctt 26775727  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  26775726 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 26775636  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  26775635 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26775578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 29574895 - 29575243
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  29574895 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 29574993  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |         |||||||||| ||||    
T  29574994 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgactacctttttttttagtgctttttccctt 29575093  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  29575094 ggaaataatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 29575185  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  29575186 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29575243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 27046270 - 27046616
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  27046270 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27046368  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  27046369 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 27046466  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  27046467 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 27046558  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  27046559 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27046616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 4722448 - 4722102
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||| |||||| ||||    
T  4722448 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcccctcgctctgcccaaagcgagagtg 4722350  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  4722349 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tacttttcttttagtgctttttccctt 4722251  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  4722250 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 4722160  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  4722159 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4722102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 27487011 - 27487362
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  27487011 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27487109  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaat-cgtcgtttctttcacgactttcannnnnnnnagtgcttttt---cc 222  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||||| |  |||||||||| |||||||            ||||||||||   ||    
T  27487110 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattgtgtcgtttcttccacgactacttttttttttagtgcttttttcccc 27487209  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaa 322  Q
    ||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||    
T  27487210 ttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaa 27487302  T
Q  323 atcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  27487303 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 3697963 - 3698312
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  3697963 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 3698061  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact--ttcannnnnnnnagtgcttttt-cc 222  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  ||          |||||||||| ||    
T  3698062 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttttagtgctttttccc 3698161  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaa 322  Q
    ||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||    
T  3698162 ttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaa 3698252  T
Q  323 atcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  3698253 atcatccaatcattatatgcaggttgaaccataataaacccattgaacacagtaatccta 3698312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 16676021 - 16676369
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  16676021 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16676119  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  16676120 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 16676216  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  16676217 ggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg---aaaaaaaaaaaaactctttct-aaaat 16676311  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  16676312 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 16676369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 4527168 - 4527513
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4527168 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4527266  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  4527267 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tactttttttaagtgctttttccctt 4527364  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||  ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||||||||    
T  4527365 ggaagcaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttctaaaaat 4527455  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| ||||||||||||||| || ||||||||||| ||||||    
T  4527456 catccaatcattatatgcaggttgaaccataataaatccgttgaacacagtaatccta 4527513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 26114724 - 26114379
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26114724 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26114626  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  26114625 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tactttttttaagtgctttttccctt 26114528  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                || ||||| |||||    
T  26114527 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactatttct-aaaat 26114437  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  26114436 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26114379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 4544089 - 4543741
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4544089 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4543991  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| ||||||  | |||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  4543990 atattttctgtaagggcatgtttgtttcggcattgccgttggttaataaaattttgtcgtttcttccacgac-tacttttcttttagtgctttttccctt 4543892  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||| ||||||| | |||||||                |||||||| |||||    
T  4543891 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattagtttcaaaaatctgcatg-----aaaaaaaaaagctctttct-aaaat 4543799  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  4543798 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4543741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 4774765 - 4775109
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| || |||||| ||||    
T  4774765 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgtccaaagcgagagtg 4774863  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  4774864 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 4774960  T
Q  225 ggaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    ||||| ||||||||||| || ||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  4774961 ggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttct-aaaa 4775050  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  4775051 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4775109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 16942341 - 16941994
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| || ||| |||| ||||||||||||||||||||||||||| |||||| ||||    
T  16942341 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaaatgctttatttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16942243  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttcct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||  ||||||||    
T  16942242 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttttcct 16942145  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  16942144 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------gaaaaaaaaactctttct-aaaa 16942053  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  16942052 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 16941994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 381
Target Start/End: Complemental strand, 30556330 - 30555984
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  30556330 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 30556232  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  30556231 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgctttttccctt 30556133  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  30556132 ggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 30556041  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  30556040 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 30555984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 26920269 - 26920528
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||    
T  26920269 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 26920368  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttggaaat 230  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| |||||||||    
T  26920369 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gctttttttagtgcttttttcttggaaat 26920465  T
Q  231 aatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  26920466 aatggtaatgccagaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 26920528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 4759646 - 4759992
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4759646 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4759744  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| ||| || || |||||||  | |||||||||| |||||| | |         |||||||||| ||||    
T  4759745 atattttctgtaagggcatgtttgtttcggcattgccattgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgctttttccctt 4759843  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||| ||| | |||||||                |||||||| |||||    
T  4759844 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaattttaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 4759934  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  4759935 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4759992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 35 - 382
Target Start/End: Original strand, 29503304 - 29503645
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||||||| ||||||  ||||||||||    
T  29503304 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctcccgctctgcccaaagcgagggtgatatttt 29503402  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttggaaataa 232  Q
    ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||| |||| ||||||||| ||    
T  29503403 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactctttttttagtgtttttcccttggaaacaa 29503501  T
Q  233 tggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcatccaat 332  Q
    ||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||||||||||    
T  29503502 tggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg----aaaaaaaaaaaactctttct-aaaatcatccaat 29503595  T
Q  333 cattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  29503596 cattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29503645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 17090760 - 17090410
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||| ||||| ||||||||||| |||||||||||    
T  17090760 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaaatgtt--gtttttcaaaataacgatcctttcgctctgcccaaagcgaaagtg 17090663  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaata--aaaatcgtcgtttctttcacgactttca---nnnnnnnnagtgc--ttttt 220  Q
    | ||| |||| ||||||||||||||||||||||  || |||||||||  ||||||||||||||||||||| ||||||             |||  || ||    
T  17090662 agattatctgtaagggcatgtttgtttcggcattcccattatcaataaaaaaatcgtcgtttctttcacggctttcatttttaatttttatgcctttctt 17090563  T
Q  221 ccttggaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttcta 319  Q
    ||||||||||||||||||||| || ||||||||||||||||| || ||||||||||||||||||| | ||||||                  |||||||     
T  17090562 ccttggaaataatggtaatgccagaaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat--------aaaaaaaccatctttct- 17090473  T
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
     |||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||    
T  17090472 caaatcatccaatcattttacgcagattgaaccataataaacccgttgagcacagtgatccta 17090410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 27021028 - 27021286
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  27021028 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 27021127  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| |||||||||    
T  27021128 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttcttccacgact----gcttttttagtgctttttcccttggaaa 27021223  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  27021224 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 27021286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 26990780 - 26991040
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  26990780 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 26990879  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||  |          |||||  ||||||||||||||    
T  26990880 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac--tgcttttttttagtgccttttttccttggaaa 26990977  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| |||||||||||||| |||| || ||||||||||||||||||| | ||||||    
T  26990978 taatggtaatgccagaaaaaaccaaaatatctgta-ttttcttattaatttcaaaaatctgcat 26991040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 35 - 284
Target Start/End: Complemental strand, 15422624 - 15422373
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  15422624 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 15422525  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttggaaata 231  Q
    |||| |||||||||||||||||||||| ||| || || ||| |||||| ||||||||||||||||||             ||  ||||||||||||||||    
T  15422524 tctgtaagggcatgtttgtttcggcattgccattgattaataaaaaattgtcgtttctttcacgactgcttttttttagtgtcttttttccttggaaata 15422425  T
Q  232 atggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  15422424 atggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 15422373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 22933187 - 22932929
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  22933187 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 22933088  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    |||  |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| |||||||||    
T  22933087 tctataagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact----gcttttttagtgctttttcccttggaaa 22932992  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  22932991 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 22932929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 23855632 - 23855374
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  23855632 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 23855533  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    |||  |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| |||||||||    
T  23855532 tctataagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact----gcttttttagtgctttttcccttggaaa 23855437  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  23855436 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 23855374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 24302925 - 24302664
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 132  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| |||||| |||||||||||||||||||| |||||| ||||||| ||    
T  24302925 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaatcacaatcctctcgctctgcccaaagcgagagtgatattt 24302826  T
Q  133 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaat---aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttgga 227  Q
    ||||| |||||||||||||||||||||| |||||| || |||   |||||| ||||||||||||||||||   |        ||||| ||||||||||||    
T  24302825 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaaaattgtcgtttctttcacgactgcta---tttttagtgcttttttccttgga 24302729  T
Q  228 aataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||| ||||||||||||||||| | || ||||||||||||||||||| | ||||||    
T  24302728 aataatggtaatgccagaaaaaaccaaaacatttgta-ttttcttattaatttcaaaaatctgcat 24302664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 27009612 - 27009960
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||| |||||| ||||    
T  27009612 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaaccctctcgctctgcccaaagcgagagtg 27009710  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| ||||||||| |||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  27009711 atattttctgtaagggcatgcttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 27009808  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| ||||    || ||||||||||| | |||||||                  |||||| |||||    
T  27009809 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatt----ttcttaatttcaaaaatctgcatgaaaaaaaaaaaaaact-actttct-aaaat 27009902  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  27009903 catccaatcattatatgcaggttgaaccataataaaccctttgaacacagtaatccta 27009960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 20162505 - 20162767
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||  |||||||||| |||||||| || ||||  || ||| ||||||||||||||    
T  20162505 tcaatcatgcatgtgtccgagtaatgtgtcttgttgcttaagtttgtt--ttttcaaaatgacaatcctttcactctatccaaagtgaaagtgatatttt 20162602  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnn----agtgcttttt-ccttggaaa 229  Q
    ||| |||| |||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||              |||||||||| || ||||||    
T  20162603 ctgtaaggacatgtttgtttcggcattcccgttatcaataaaaattgtcgtttctttcacgactttttgtttttatttttagtgcttttttccctggaaa 20162702  T
Q  230 taatggtaatgctag--aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||  |||||||||| |||||| || ||||||||||||||||||| | ||||||    
T  20162703 taatggtaatgccagaaaaaaaaccaatacatctgta-ttttcttattaatttcaaaaatctgcat 20162767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 22170326 - 22170163
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||  |||||||||| |||||||| || ||||  || ||| ||||||||||||||    
T  22170326 tcaatcatgcatgtgtccgagtaatgtgtcttgttgcttaagtttgtt--ttttcaaaatgacaatcctttcactctatccaaagtgaaagtgatatttt 22170229  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||| |||| |||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  22170228 ctgtaaggacatgtttgtttcggcattcccgttatcaataaaaattgtcgtttctttcacgacttt 22170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 29551364 - 29551631
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  29551364 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtactttgttttccaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 29551463  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atca--ataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc---tttttccttggaa 228  Q
    ||| |||||||||||||||||||||| |||||| || |  |||||||| |||||||| ||||||||| |          |||||   |||| ||||||||    
T  29551464 ctgtaagggcatgtttgtttcggcattgccgttgattaatataaaaattgtcgtttccttcacgactgt-ttctttttaagtgccttttttcccttggaa 29551562  T
Q  229 ataatggtaatgctag----aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    | ||||||||||| ||    ||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  29551563 acaatggtaatgccagaaaaaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 29551631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 13297258 - 13296996
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  13297258 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 13297159  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-----atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttgga 227  Q
    |||| |||||||||||||||||||||| ||||||     || || |||||| |||||||||||||| ||  |          ||| | ||||| ||||||    
T  13297158 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaaaaattgtcgtttctttcacaac--tgcttttttttagtacattttttcttgga 13297061  T
Q  228 aataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||| ||||||||||||||||| | || ||||||||||||||||||| | ||||||    
T  13297060 aataatggtaatgccagaaaaaaccaaaacatttgta-ttttcttattaatttcaaaaatctgcat 13296996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 35 - 198
Target Start/End: Original strand, 16751743 - 16751909
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||    
T  16751743 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 16751842  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgact 198  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| ||||||||||||||||||    
T  16751843 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgact 16751909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 284
Target Start/End: Original strand, 24865606 - 24865859
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    |||||||||||||| || ||||||| |  |||||||||||||| | ||||||| ||||||||  |||||||||||||||||| ||| || ||||||||||    
T  24865606 tcaatcatgcatgtgtctgagtaatataccttgttgcttaagtatcttgttttttcaaaatataaatcctctcgctctgcccaaagtgagagtgatattt 24865705  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa---tcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttgga 227  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||   | ||||||||||||||| ||             ||||  ||||| ||||||    
T  24865706 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattttgtcgtttctttcacggct---gctttttttggtgcttttttttcttgga 24865802  T
Q  228 aataatggtaatgctagaaaaaacc-aaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||||| |||||||||| ||||||||| || |||||||||||||||||||    
T  24865803 aataatggtaatgccagaaaaaaccaaaaacatctgta-ttttcttattaatttcaaa 24865859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 14142508 - 14142431
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  14142508 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 14142431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 34462526 - 34462473
Alignment:
Q  329 caatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  34462526 caatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34462473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 22932921 - 22932870
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  22932921 ctctttctaaaa-tcatccaatcattttacgcagattgaactataataaaccc 22932870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 23855366 - 23855315
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  23855366 ctctttctaaaa-tcatccaatcattttacgcagattgaactataataaaccc 23855315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 8891481 - 8891419
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  8891481 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 8891419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 8902716 - 8902654
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  8902716 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 8902654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 22170148 - 22170064
Alignment:
Q  211 agtgcttttt-ccttggaaataatggtaatgctagaaaaaa--ccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||| || |||||||||||||||||| ||||||||  |||| |||||| |||||| ||||||||||||||| | ||||||    
T  22170148 agtgcttttttccctggaaataatggtaatgccagaaaaaaaaccaatacatctgtatttt-cttattaatttcaaaaatctgcat 22170064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 24302655 - 24302591
Alignment:
Q  311 ctctttctaaaaatcatccaatca-ttatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| |||||||| || || |||||||||||| ||||||||||||| |||||||||||    
T  24302655 ctctttctaaaa-tcatccaaccaattttacgcagattgagccataataaacccgttgaacacagt 24302591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 391
Target Start/End: Original strand, 26788994 - 26789070
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| |||||| | ||||||    
T  26788994 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatcctacggttcttc 26789070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 391
Target Start/End: Original strand, 27197363 - 27197439
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| |||||| | ||||||    
T  27197363 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatcctacggttcttc 27197439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 27251872 - 27251796
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| |||||| | ||||||    
T  27251872 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatcctacggttcttc 27251796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 13296988 - 13296937
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  13296988 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 13296937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 13521209 - 13521142
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  13521209 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 13521142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 14142412 - 14142345
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  14142412 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 14142345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 15422357 - 15422306
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  15422357 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 15422306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 20162779 - 20162842
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| ||||| || |||| ||||||||||||||||| |||||||| |||| ||||||    
T  20162779 ctctttctaaaa-tcatcaaaccattttacgcagattgaaccattataaacccgttgagcacagt 20162842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 24865875 - 24865926
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  24865875 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 24865926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 26991048 - 26991099
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  26991048 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 26991099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 27021295 - 27021346
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    ||| |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  27021295 ctccttctaaaa-tcatccaatcattttacgcagattgaactataataaaccc 27021346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 27359128 - 27359061
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  27359128 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27359061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 27449471 - 27449404
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  27449471 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27449404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 29551639 - 29551708
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  29551639 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 29551708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 22456132 - 22456072
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| |||||||||||    
T  22456132 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagt 22456072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 28163695 - 28163736
Alignment:
Q  341 gcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||| |||||||||||||||||| ||||||||||| ||||||    
T  28163695 gcagtttgaaccataataaacccgttgaacacagtaatccta 28163736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 16751980 - 16752031
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| |||||    
T  16751980 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaaccc 16752031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 26920536 - 26920587
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| |||||    
T  26920536 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaaccc 26920587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 180; Significance: 4e-97; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 22277 - 22545
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22277 catcaacattccttcaatcatgcataattccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagca 22376  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-ttttt 220  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |        ||||| |||||    
T  22377 aaagtgata-tttctggaagggcgtgtttatttcggcatcgccgttattaataaaaatcgtcgtttctttcacgactttta---tttttagtgctttttt 22472  T
Q  221 ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  22473 ccttggaaataatggtaatgccagaaaaaaccaaaacatctttatttttcctattaatttcaaagatctgcat 22545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 375
Target Start/End: Original strand, 22565 - 22620
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||| ||| |||| ||||||| |||||||||||||||||| |||||||||||    
T  22565 aaaatcattcaaccattttacgcagtttgaaccataataaacccgttgaacacagt 22620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 3e-95; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 28 - 284
Target Start/End: Complemental strand, 16206402 - 16206144
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16206402 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 16206303  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca-nnnnnnnnagtgc--tttttcctt 224  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |         |||||  |||||||||    
T  16206302 atattttctgtaagggcatgtttgtttcggcatcgtcgttattaataaaaatcgtcgtttctttcacggcttttatttttttttagtgctttttttcctt 16206203  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  16206202 ggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 16206144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 28152624 - 28152801
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28152624 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 28152723  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  28152724 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttt 28152801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 28 - 293
Target Start/End: Original strand, 20462865 - 20463133
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||||    
T  20462865 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtttcgt-tttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 20462963  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca----nnnnnnnnagtgctttttcct 223  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |            ||||| |||||||    
T  20462964 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacggcttttattttttttatttagtgccttttcct 20463063  T
Q  224 tggaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||||||| || ||||||||||||||||| || |||||||||| | |||||| | ||||||    
T  20463064 tggaaataatggtaatgccagaaaaaaaccaaaacatctgta-ttttcttattgaattcaaaaatctgcat 20463133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 28 - 384
Target Start/End: Complemental strand, 41791679 - 41791332
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  41791679 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 41791581  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||| ||||||  |          ||||||||| |||||    
T  41791580 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttcttccacgac--tacttttttttagtgcttttcccttg 41791483  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  41791482 gaaacaatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaacaactctttct-aaaatc 41791391  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatg 384  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||    
T  41791390 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 41791332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 28 - 280
Target Start/End: Complemental strand, 20339822 - 20339562
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  20339822 cattccttcaatcatgcatgtttccgaataatgtgtcttgttgattaaatgttttgtttttcaaaataaccatcctctcgctcggcccgaagcgaaagtg 20339723  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca-----nnnnnnnnagtgcttttt-- 220  Q
    ||| ||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| |||| |             ||||||||||      
T  20339722 ata-tttctggaagggcgtgtttgtttcggcattcccgttatcaataaaaatcgtcgtttctttcacggcttttattattttttttctagtgcttttttc 20339624  T
Q  221 --ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaattt 280  Q
       |||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||    
T  20339623 tctcttggaaataatggtaataccagaaaaaaccaaaacatctgtattttttttattaattt 20339562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 34 - 382
Target Start/End: Original strand, 10946969 - 10947311
Alignment:
Q  34 ttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  10946969 ttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatattt 10947067  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaat 230  Q
    |||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         |||||||||| |||||||||     
T  10947068 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgctttttcccttggaaac 10947166  T
Q  231 aatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcatcc 329  Q
    ||||||||||| || ||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||||||    
T  10947167 aatggtaatgccagaaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaatcatcc 10947258  T
Q  330 aatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  10947259 aatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10947311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 35 - 382
Target Start/End: Original strand, 51640109 - 51640452
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| |||||||||||||||||||||   || |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  51640109 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttgatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 51640207  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaata 231  Q
    ||| |||||||||||||||||||||| ||||||  | |||||||  | |||||||||| |||||||   |        |||||||||| ||||||||| |    
T  51640208 ctgtaagggcatgtttgtttcggcattgccgttggttaataaaattttgtcgtttcttccacgact---actttttttagtgctttttcccttggaaaca 51640304  T
Q  232 atggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcatccaa 331  Q
    |||||||||| ||||||||||||||||| | || ||||||||||||||||||| | |||||||                |||||||| ||||||||||||    
T  51640305 atggtaatgccagaaaaaaccaaaacatttgta-ttttcttattaatttcaaaaatctgcatg-aaaaaaaaaaaaaaactctttct-aaaatcatccaa 51640401  T
Q  332 tcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  51640402 tcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 51640452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 35 - 382
Target Start/End: Original strand, 10964561 - 10964899
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| || ||||| |||||||||||||||| |||||||||| ||||||  ||||||||||    
T  10964561 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgcttcgtttt-caaaataacaatcctcccgctctgcccaaagcgagggtgatatttt 10964659  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttggaaataa 232  Q
    ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||| |||| ||||||||| ||    
T  10964660 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgactacttttttttttagtgtttttcccttggaaacaa 10964759  T
Q  233 tggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcatccaat 332  Q
    ||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||||||||||    
T  10964760 tggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttct-aaaatcatccaat 10964849  T
Q  333 cattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  10964850 cattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10964899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 28586865 - 28587219
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28586865 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28586963  T
Q  128 atattttctg-gaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt---- 220  Q
    ||||||||||  |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         ||||||||||        
T  28586964 atattttctgtaaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgcttttttttt 28587062  T
Q  221 -ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttcta 319  Q
     ||||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |  |||||     
T  28587063 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg----aaaaaaaaaaaccattttct- 28587156  T
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  28587157 aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28587219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 20339537 - 20339474
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  20339537 ctctttctaaaa-tcatccaaccattttacgcagattgaaccataataaacccgttgaacacagt 20339474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 28152838 - 28152897
Alignment:
Q  225 ggaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||||||||||||||||| || ||||||||||||||||| || |||||||||||||||||||    
T  28152838 ggaaataatggtaatgccagaaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 28152897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 28152924 - 28152986
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  28152924 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 28152986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 16206124 - 16206074
Alignment:
Q  312 tctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    ||||||||||| |||||||| |||| |||||||||||| |||||||||||||    
T  16206124 tctttctaaaa-tcatccaaccattttacgcagattgagccataataaaccc 16206074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 1e-94; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 28 - 293
Target Start/End: Original strand, 15229769 - 15230039
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15229769 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 15229868  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaat-----aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttc 221  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||     |||||||||||||||||||||| |||| |        ||||| ||||||    
T  15229869 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaaaaaaatcgtcgtttctttcacggcttttattttttttagtgcttttttc 15229968  T
Q  222 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  15229969 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 15230039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 36 - 293
Target Start/End: Original strand, 1902165 - 1902421
Alignment:
Q  36 caatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattttc 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1902165 caatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttccaaataacaatcctctcgctctgcccgaagcgaaagtgatattttc 1902264  T
Q  136 tggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaaataat 233  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |        ||| |  ||||||||||||||||||    
T  1902265 tgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacggctttta--ttttttagtactttttttccttggaaataat 1902362  T
Q  234 ggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  1902363 ggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 1902421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 28 - 284
Target Start/End: Complemental strand, 15283299 - 15283041
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15283299 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 15283200  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc----tttttcc 222  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| |        |||||    |||||||    
T  15283199 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaaatcgtcgtttctttcacggctttta--aattttagtgctttttttttcc 15283102  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  15283101 ttggaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 15283041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 22 - 286
Target Start/End: Complemental strand, 15389755 - 15389493
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||| || ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15389755 catcaacattcctttaatcatgcataattctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 15389656  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-ttttt 220  Q
      ||||||| |||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||          ||||| |||||    
T  15389655 ggagtgata-tttctgaaagggtgtgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacggcttt--ttacttttagtgctttttt 15389559  T
Q  221 ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaaga 286  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  15389558 ccttggaaataatggtaatgccagaaaaaaccaaaacatctttatttttcttattaattacaaaga 15389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 24460140 - 24459961
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24460140 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 24460041  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  24460040 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 24459961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 28 - 384
Target Start/End: Original strand, 5007773 - 5008122
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  5007773 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 5007872  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| ||||||||||||||||| | |         ||||| |||| ||||    
T  5007873 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac-tgctttttttttagtgcctttttcttg 5007971  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  5007972 gaaa-aatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaactctctttct-aaaatc 5008063  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatg 384  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||    
T  5008064 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 5008122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 54835287 - 54835636
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||||||||    
T  54835287 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgaaagtg 54835386  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat--aaaaatcgtcgtttctttcacgact-ttcannnnnnnnagtgctttttcct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||  |||||| ||||||||||||||||||  |          ||||| |||| ||    
T  54835387 atattttctgtaagggcatgtttgtttcggcattgccgttgatgaataaaaaaattgtcgtttctttcacgactgctttttttttttagtgcctttttct 54835486  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  54835487 tggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaa 54835577  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  54835578 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 54835636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 34187324 - 34187062
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  34187324 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtattttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 34187225  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc---tttttccttggaaat 230  Q
    ||| ||||||||||||||||| |||| |||||| || ||||||||| ||||||||||||||||||            ||| |   |||| ||||||||||    
T  34187224 ctgtaagggcatgtttgtttcagcattgccgttgattaataaaaattgtcgtttctttcacgactgcttttttttttagtaccctttttcccttggaaat 34187125  T
Q  231 aatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  34187124 aatggtaatgccagaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 34187062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 27161687 - 27161341
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  27161687 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27161589  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| |  |||||||  | |||||||||| |||||| | |         ||||||||| |||||    
T  27161588 atattttctgtaagggcatgtttgtttcggcattgccgttgactaataaaattttgtcgtttcttccacgac-tacttttttttaagtgcttttcccttg 27161490  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  27161489 gaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaatc 27161398  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  27161397 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27161341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 39852538 - 39852882
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  39852538 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 39852636  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  39852637 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgact---actctttttagtgctttttccctt 39852733  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  39852734 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 39852824  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  39852825 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 39852882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 24590719 - 24590463
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  24590719 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 24590620  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagt-gctttttccttggaaataa 232  Q
    ||| |||||||||||||||||||||| |||||| || ||||||||| |||||||||||||||||| |          |||  |||||| |||||||||||    
T  24590619 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgactgt---tttttttagtaccttttttcttggaaataa 24590523  T
Q  233 tggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  24590522 tggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 24590463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 33672169 - 33671824
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| || | |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  33672169 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagcgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 33672071  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  33672070 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 33671973  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  33671972 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 33671882  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  33671881 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 33671824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 35 - 382
Target Start/End: Original strand, 6571760 - 6572103
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt--tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 132  Q
    ||||||||||||||||| ||||||| |  |||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  6571760 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtgtcttgtttttttcaaaataacaatcctctcgctctgcccaaagcgaaagtgatatt 6571859  T
Q  133 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    ||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| |||||||||    
T  6571860 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttctttagtgctttttcccttggaaa 6571957  T
Q  230 taatggtaatgctagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcatc 328  Q
     ||||||||||| ||||||||||||||| ||| || |||||||||||||||||||| | |||||||                |||||||| |||||||||    
T  6571958 caatggtaatgccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaatcatc 6572049  T
Q  329 caatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  6572050 caatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 6572103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 18798984 - 18798638
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  18798984 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 18798886  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  18798885 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 18798788  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||  || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  18798787 ggaaacaatggtaatgccagaaaaaaccaaaacgtccgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 18798696  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  18798695 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 14100441 - 14100788
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  14100441 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 14100539  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    || ||||||| |||||| ||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  14100540 atgttttctgtaagggcgtgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttagtgctttttccctt 14100639  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  14100640 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactctttct-aaaat 14100730  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| ||||| |||||||||||| ||||||||||| ||||||    
T  14100731 catccaatcattatatgcaggttgaatcataataaacccgttgaacacagtaatccta 14100788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 40104009 - 40103661
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  40104009 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 40103911  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact--ttcannnnnnnnagtgcttttt-cc 222  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  ||          |||||||||| ||    
T  40103910 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttttagtgctttttccc 40103811  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaa 322  Q
    ||||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||    
T  40103810 ttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttct-aaa 40103721  T
Q  323 atcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||| |||| |||||||  ||||||||| ||||||||||| ||||||    
T  40103720 atcatccaatcattatatgcaggttgaaccccaataaacccgttgaacacagtaatccta 40103661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 28 - 284
Target Start/End: Original strand, 30755654 - 30755912
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| || | ||||||||  |||||||||||| ||||||||||||| |||||| ||||    
T  30755654 cattccttcaatcatgcatgtgtccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcatctcgctctgcccaaagcgagagtg 30755753  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt---cc 222  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          ||||||||||   ||    
T  30755754 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttttccc 30755851  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  30755852 ttggaaacaatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 30755912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 14761668 - 14761409
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||  ||||||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14761668 tcaatcatgcatgtttttgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 14761569  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaata 231  Q
    ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||||||| |    
T  14761568 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttcccttggaaaca 14761471  T
Q  232 atggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||||||| | ||||||    
T  14761470 atggtaatgccagaaaaaaccaaaacgtctgtatttttcttattaatttcaaaaatctgcat 14761409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 31124889 - 31124621
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  31124889 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 31124791  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt----c 221  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          ||||||||||    |    
T  31124790 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgcttttttttcc 31124693  T
Q  222 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    |||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||    
T  31124692 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg 31124621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 14666925 - 14667183
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  14666925 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 14667024  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||| ||||| | |||||            |||||||||| ||| |||||    
T  14667025 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgattcttccgcgact----gcttttttagtgctttttccctcggaaa 14667120  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  14667121 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 14667183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 24114569 - 24114829
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||| ||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  24114569 tcaatcatgcatgtttctgagtaatataccttgttgcctaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 24114668  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat--aaaaatcgtcgtttctttcacgactttcannnnnnnnagtg-ctttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || |||  |||||| ||||||||||||||||||            |||| |||||| ||||||||    
T  24114669 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaaattgtcgtttctttcacgact---gctttttttagtgccttttttcttggaaa 24114765  T
Q  230 taatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| || ||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  24114766 taatggtaatgccagaaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 24114829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 28 - 375
Target Start/End: Original strand, 21971601 - 21971939
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||| ||||||||| |||||| |||     
T  21971601 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctcttgctctgcccaaagcgagagta 21971699  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    || ||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||| ||||| ||||    
T  21971700 atgttttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgttttttccctt 21971797  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                | |||||| |||||    
T  21971798 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaaaaaccctttct-aaaat 21971888  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  21971889 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 21971939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 36342879 - 36342619
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||  ||||||||| ||||||||||||||||||||||||||| |||||| | ||||||||    
T  36342879 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtactttgttttttcaaaataacaatcctctcgctctgcccaaagcgagaatgatattt 36342780  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaat 230  Q
    |||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| |||||||||     
T  36342779 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---accttttttagtgctttttcccttggaaac 36342683  T
Q  231 aatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||| || ||||||||||||| ||| |||||||||| ||||||||||| | ||||||    
T  36342682 aatggtaatgccagaaaaaaaccaaaacgtctatatttttcttgttaatttcaaaaatctgcat 36342619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 17014950 - 17015213
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| | ||||||||    
T  17014950 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagattgatattt 17015049  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat---aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc---tttttccttgg 226  Q
    |||| |||||||||||||||||||||| ||| || || |||   |||||| ||||||||||||||||||            |||||   |||||||||||    
T  17015050 tctgtaagggcatgtttgtttcggcattgccattgattaataaaaaaaattgtcgtttctttcacgact---gctttttttagtgcctttttttccttgg 17015146  T
Q  227 aaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||||| || |||||||||||| |||| || ||||||||||||||||||| | ||||||    
T  17015147 aaataatggtaatgccagaaaaaaaccaaaatatctgta-ttttcttattaatttcaaaaatctgcat 17015213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 24459928 - 24459851
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  24459928 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 24459851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 18315264 - 18315202
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  18315264 aaaatcatacaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 31124603 - 31124543
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  31124603 tttctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 31124543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 30755935 - 30755998
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||| |||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  30755935 ctcttcctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 30755998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 14761401 - 14761331
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  14761401 ctctttctaaaaatcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 14761331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 1902428 - 1902479
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||| |||||||||||||    
T  1902428 ctctttctaaaa-tcatccaaccattttacgcagattgagccataataaaccc 1902479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 14667191 - 14667242
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  14667191 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 14667242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 24459829 - 24459762
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  24459829 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 24459762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 34187054 - 34187003
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  34187054 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 34187003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 24590451 - 24590386
Alignment:
Q  315 ttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||| |||||||| |||| |||||||||||||| ||||||||||| |||  |||||| |||||    
T  24590451 ttctaaaa-tcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 24590386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 36342611 - 36342542
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||| ||||||| |||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  36342611 ctctttctaaaaa-catccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 36342542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 15230047 - 15230095
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaa 360  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||||||||    
T  15230047 ctctttctaaaa-tcatccaaccattttacgcagattgagccataataaa 15230095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 17015224 - 17015272
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    ||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  17015224 tttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 17015272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 15283022 - 15282971
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||| |||||||    
T  15283022 ctctttctaaaa-tcatccaaccattttacgcagattgagccatagtaaaccc 15282971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 15389464 - 15389400
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatg 384  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||| ||| | ||||||    
T  15389464 aaaatcattcaaccattttatgcagtttgaaccataataaacccgttgaacatagtaaccctatg 15389400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 173; Significance: 6e-93; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 22 - 294
Target Start/End: Complemental strand, 119433 - 119162
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||| |||||||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  119433 catcaacattccttcaatcatgcataattccgagtgatgtgtcttgttgcttaagtgtttcgtttttcaaaataacaatcctctcgctctgcccgaggcg 119334  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttc 221  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |          |  ||||||    
T  119333 aaagtgata-tttctgaaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacggcttttatttttagtgcttttttttc 119235  T
Q  222 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  119234 cttggaaataatggtaatgccagaaaaaaccaaaacatctttatttttcttattaatttcaaagatctgcatg 119162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 119145 - 119085
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    ||||||||| |||| ||| |||| ||||||| |||||||||||||||||| |||||||||||    
T  119145 tttctaaaa-tcattcaaccattctacgcagtttgaaccataataaacccgttgaacacagt 119085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 1e-91; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 32293476 - 32293748
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32293476 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 32293575  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca--nnnnnnnnagtgctttt 219  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |          | |  ||||    
T  32293576 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 32293674  T
Q  220 tccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    | |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  32293675 ttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 32293748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 22 - 284
Target Start/End: Original strand, 5653069 - 5653331
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5653069 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 5653168  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttt 219  Q
    || |||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |        ||||| ||||    
T  5653169 gacagtgatattttctataagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttttattttttttagtgcttttt 5653268  T
Q  220 tccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||| |||||||||||||||||| |||||||||||||| |||| || |||||||||||||||||||    
T  5653269 tccgtggaaataatggtaatgccagaaaaaaccaaaa-atctgta-ttttcttattaatttcaaa 5653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 28 - 284
Target Start/End: Original strand, 19696338 - 19696595
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagt 126  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  19696338 cattccttcaatcatgcatgtttccgcataatgtgtcttgttgcttaagtgttttgttttttcaaaataacaatcctctcgctctgcccgaagcgacagt 19696437  T
Q  127 gatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttt-tccttg 225  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |        ||||||||| ||||||    
T  19696438 gatattttctataagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttttattttttttagtgcttttctccttg 19696537  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  19696538 gaaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 19696595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 4626626 - 4626907
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4626626 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 4626725  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc----- 215  Q
    ||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |        ||| |         
T  4626726 gacggtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgacttttattttttttagttcttttt 4626825  T
Q  216 ----tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
        |||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  4626826 tttttttttttttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 4626907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 31033651 - 31033373
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31033651 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 31033552  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnag--------t 213  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |         |        |    
T  31033551 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttttattttttagtgatttttttt 31033453  T
Q  214 gctttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
      ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  31033452 ctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 31033373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 28 - 293
Target Start/End: Original strand, 18532234 - 18532498
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532234 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 18532333  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaa-taaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttcctt 224  Q
    |||||||||  ||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||||| ||||||        |||||  ||||| |||    
T  18532334 atattttctataagggcatgtttgtttcagcatcgccgttattaacaaaaaatcgtcgtttctttcacggctttca--ttttttagtgcttttttttctt 18532431  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||||||| |||||||||| |||||||| || ||||||||||||||||||| | ||||||    
T  18532432 ggaaataatggtaatgccagaaaaaacc-aaacatctgta-ttttcttattaatttcaaatatctgcat 18532498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 22 - 382
Target Start/End: Complemental strand, 29663388 - 29663037
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacaatcctctcgctctgcccgaagc 120  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29663388 catcatcattccttcaatcatgcatgtttccgagtaatgggtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 29663289  T
Q  121 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttt 218  Q
    || |||||||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        ||||||||    
T  29663288 gacagtgatattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgact---actttttttagtgcttt 29663192  T
Q  219 tt-ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttc 317  Q
    || ||||||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||    
T  29663191 ttcccttggaaataatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaatctctttc 29663101  T
Q  318 taaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    | |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  29663100 t-aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29663037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 5713909 - 5714086
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5713909 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 5714008  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  5714009 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 5714086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 5724819 - 5724996
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5724819 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 5724918  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  5724919 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 5724996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 5767549 - 5767372
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5767549 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 5767450  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  5767449 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgacttt 5767372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 56 - 284
Target Start/End: Complemental strand, 16622869 - 16622645
Alignment:
Q  56 taatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattttctggaagggcatgtttgtttc 155  Q
    |||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16622869 taatgtgtcttgttgcttaagttttgt-tttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattttctgtaagggcatgtttgtttc 16622771  T
Q  156 ggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttggaaataatggtaatgctagaaaaaaccaa 254  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |        ||||| |||||||| ||||||||||||||||| ||||||||||||    
T  16622770 ggcatcgccgttattaataaaaatcgtcgtttctttcacgactttta---tttttagtgcttttttcctcggaaataatggtaatgccagaaaaaaccaa 16622674  T
Q  255 aacatctttatttttcttattaatttcaaa 284  Q
    ||||||| || |||||||||||||||||||    
T  16622673 aacatctata-ttttcttattaatttcaaa 16622645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 17993360 - 17993183
Alignment:
Q  22 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 121  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17993360 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 17993261  T
Q  122 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgacttt 200  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  17993260 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgcagttattaacaaaaatcgtcgtttctttcacgacttt 17993183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 28 - 384
Target Start/End: Original strand, 4418765 - 4419110
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  4418765 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 4418864  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||| |||||| ||||||||||||||||||            ||||| |||| ||||    
T  4418865 atattttctgtaagggcgtgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgact----gcttttttagtgcctttttcttg 4418960  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  4418961 gaaaaaatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaacaactctttct-aaaatc 4419051  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatg 384  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||    
T  4419052 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 4419110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 8213584 - 8213928
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  8213584 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 8213682  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  8213683 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 8213779  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  8213780 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-------aaagaaaaactctttct-aaaat 8213870  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  8213871 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 8213928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 18244585 - 18244934
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  18244585 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 18244683  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||| |          |||||||||| ||||    
T  18244684 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactat--ttttttttagtgctttttccctt 18244781  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  18244782 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg---aaaaaaaaaaaaactctttct-aaaat 18244876  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  18244877 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18244934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 32441007 - 32441266
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  32441007 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 32441106  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc---tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||| ||||||||||||||||||            |||||   |||| |||||||||    
T  32441107 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgact----gcttttttagtgccttttttcccttggaaa 32441202  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  32441203 taatggtaatgccagaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 32441266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 7075058 - 7075402
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  7075058 cattccttcgatcatgcatgtttccgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 7075156  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagt-gctttttcctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||| ||||  |          |||  |||||| |||    
T  7075157 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcgcgac--tgcttttttttagtaccttttttctt 7075254  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  7075255 ggaaaaaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttct-aaaat 7075344  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  7075345 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 7075402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 381
Target Start/End: Original strand, 7998408 - 7998752
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  7998408 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 7998506  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    || ||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  7998507 atgttttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 7998603  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  7998604 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 7998695  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  7998696 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 7998752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 384
Target Start/End: Complemental strand, 11108761 - 11108417
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  11108761 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 11108663  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  11108662 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact------acttttagtgctttttccctt 11108569  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| | | || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  11108568 ggaaacaatggtaatgccagaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaat 11108477  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatg 384  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||    
T  11108476 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 11108417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 5468831 - 5469181
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  5468831 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 5468929  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacg---actttcannnnnnnnagtgctttttcc 222  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||   |||||          || | ||||  |    
T  5468930 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttttaagggtttttctc 5469029  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaa 322  Q
    ||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| | |||||||                || ||||| |||    
T  5469030 ttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttttcttattaatttcaaaaatctgcatg-------aaaaaaaaactatttct-aaa 5469121  T
Q  323 atcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  5469122 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5469181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 20575259 - 20574910
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  20575259 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 20575161  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  |||||||||||| |||||||            |||||||||| ||||    
T  20575160 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaatttcgtcgtttcttccacgactacttttttttttagtgctttttccctt 20575061  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  20575060 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaat 20574968  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||| ||||||    
T  20574967 catccaatcattatatgctggttgaaccataataaacccgttgaacacagtaatccta 20574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 51783868 - 51784216
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  51783868 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 51783966  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact-ttcannnnnnnnagtgctttttcctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |          |||| |||| ||||    
T  51783967 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttaagtgtttttccctt 51784066  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| | |||||||                || ||||| |||||    
T  51784067 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttttcttattaatttcaaaaatctgcatg-------aaaaagaaactatttct-aaaat 51784158  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||||||    
T  51784159 catccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 51784216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 375
Target Start/End: Complemental strand, 22869268 - 22868922
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||||||| |||||| ||||    
T  22869268 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctcccgctctgcccaaagcgagagtg 22869170  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt--cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         ||||||||||  |||    
T  22869169 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgcttttttccct 22869071  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  22869070 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-aaaaagaaaaaaaaactctttct-aaaa 22868974  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  22868973 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 22868922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 28 - 375
Target Start/End: Complemental strand, 22884327 - 22883981
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||||||| |||||| ||||    
T  22884327 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctcccgctctgcccaaagcgagagtg 22884229  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt--cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         ||||||||||  |||    
T  22884228 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgcttttttccct 22884130  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  22884129 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-aaaaagaaaaaaaaactctttct-aaaa 22884033  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  22884032 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagt 22883981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 35 - 382
Target Start/End: Original strand, 10644923 - 10645266
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  10644923 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 10645021  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaata 231  Q
    ||| || ||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||||||| |    
T  10645022 ctgtaaaggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttagtgctttttcccttggaaaca 10645121  T
Q  232 atggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcatccaa 331  Q
    |||||||||| ||||||||||||||||| | || ||||||||||||||||||| | |||||||                |||||||| ||||||||||||    
T  10645122 atggtaatgccagaaaaaaccaaaacatttgta-ttttcttattaatttcaaaaatctgcatg----aaaaaaaaaaaactctttct-aaaatcatccaa 10645215  T
Q  332 tcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  10645216 tcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10645266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 36995612 - 36995265
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  36995612 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 36995514  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||| |||| |||||    
T  36995513 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tactttttttaagtgtttttcccttg 36995416  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    ||||  |||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  36995415 gaaacgatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg----aaaaaaaaaaaactctttct-aaaatc 36995322  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  36995321 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 36995265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 18227037 - 18227389
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  18227037 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 18227135  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt--cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          ||||||||||  |||    
T  18227136 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgcttttttccct 18227233  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  18227234 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaacctgcatg-aaaaaaaaaaaaaaactctttct-aaaa 18227330  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  18227331 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18227389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 5607734 - 5607381
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||| | || |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  5607734 cattccttcaatcatgcatgtttctgagtaatgtgtcctgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 5607636  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||| ||| |||||| | |         |||||||||| ||||    
T  5607635 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgttccttccacgac-tactttttttttagtgctttttccctt 5607537  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  5607536 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaa-atctgcatgaaaaaaaaaaaaaaaactctttct-aaaat 5607440  T
Q  325 catcc-aatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||| |||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  5607439 catccaaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5607381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 28 - 294
Target Start/End: Original strand, 10397979 - 10398244
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  10397979 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 10398077  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  10398078 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 10398175  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||    
T  10398176 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg 10398244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 24330005 - 24330356
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  24330005 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24330103  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  24330104 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 24330201  T
Q  225 ggaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    ||||| ||||||||||| || ||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  24330202 ggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--aaaaaaaaaaaaaactctttct-aaaa 24330297  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  24330298 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 24330356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 28114366 - 28114021
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||| || | ||||||||  |||||||||||||||||||||||||| | |||| ||||    
T  28114366 cattccttcaatcatgcatatttccgagtaacgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaatgcgagagtg 28114267  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttgg 226  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||||||||| ||||||||||||||||| | |         ||||| |||| |||||    
T  28114266 atattttctgtaagggcgtgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgac-tgccttttttttagtgcctttttcttgg 28114168  T
Q  227 aaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatca 326  Q
    ||| ||||||||||| |||||||||||||   ||| || ||||||||||||||||||| | |||||||                | |||||| |||||||    
T  28114167 aaaaaatggtaatgccagaaaaaaccaaacagtctgta-ttttcttattaatttcaaaaatctgcatg-------aaaaaacaaccctttct-aaaatca 28114077  T
Q  327 tccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  28114076 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28114021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 4345099 - 4344743
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4345099 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4345001  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||| |||| |||||    
T  4345000 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttttttaagtgtttttcccttg 4344901  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg---nnnnnnnnnnnnnnnnctctttctaaaa 322  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                   |||||||| |||    
T  4344900 gaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaactctttct-aaa 4344803  T
Q  323 atcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||| ||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  4344802 atcatacaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4344743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 8297825 - 8298086
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||| |||| |||||||| |||||| ||||||||||    
T  8297825 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcactctgcccaaagcgagagtgatattt 8297924  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||  |          |||||  ||||||||||||||    
T  8297925 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac--tgctctgttttagtgccttttttccttggaaa 8298022  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  8298023 taatggtaatgccagaaaaaaccaaaacatctgtatttttcttattaatttcaaaaatctgcat 8298086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 35 - 382
Target Start/End: Complemental strand, 17983361 - 17983016
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  17983361 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 17983263  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-----ccttgga 227  Q
    ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||| | |         ||||||||||     |||||||    
T  17983262 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac-tactttttttttagtgctttttttttcccttgga 17983164  T
Q  228 aataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatcat 327  Q
    || ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||||    
T  17983163 aacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaatcat 17983071  T
Q  328 ccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  17983070 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 17983016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 28023121 - 28023475
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28023121 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28023219  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact-ttcannnnnnnnagtgcttttt-cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |            |||||||| |||    
T  28023220 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttacttgctttttccct 28023319  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                || ||||| ||||    
T  28023320 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-aaaaaaaaaaaaaaactttttct-aaaa 28023416  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  28023417 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28023475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 5594769 - 5594424
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  5594769 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 5594671  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | ||| |||||| ||||||  |          |||| |||| |||||    
T  5594670 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcatttcttccacgac--tactcttttttagtgtttttcccttg 5594573  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaatc 325  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||||    
T  5594572 gaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaatc 5594481  T
Q  326 atccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  5594480 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5594424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 21676539 - 21676896
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  21676539 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 21676637  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  21676638 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tacttttttttagtgctttttccctt 21676735  T
Q  225 ggaaataatggtaatgctag-aaaaaaccaaaacatcttta-tttttcttattaatttcaaagagctgcatg--nnnnnnnnnnnnnnnnctctttctaa 320  Q
    ||||| ||||||||||| || ||||||||||||| ||| || |||||||||||||||||||| | |||||||                  |||||||| |    
T  21676736 ggaaacaatggtaatgccagaaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaactctttct-a 21676834  T
Q  321 aaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  21676835 aaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 21676896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 47025299 - 47025646
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  47025299 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 47025397  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |         ||||||||| ||||    
T  47025398 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttggtgctttttccctt 47025494  T
Q  225 ggaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    ||||| ||||||||||| || ||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  47025495 ggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg-----aaaaaaaaaaactctttct-aaaa 47025587  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  47025588 tcatccaagcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 47025646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 20067896 - 20068155
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||| ||| | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  20067896 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 20067995  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtg-cttttt--ccttggaaa 229  Q
    ||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||| ||||||||| |          |||| ||||||  |||||||||    
T  20067996 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttccttcacgactgt---tttttttagtgtcttttttcccttggaaa 20068092  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  20068093 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 20068155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 31962885 - 31962617
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  31962885 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31962786  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||            |||||||||| ||||    
T  31962785 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttttttaagtgctttttccctt 31962686  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg 294  Q
    ||||| ||||||||||| ||||||||||||||  ||| || ||||||||||||||||||| | |||||||    
T  31962685 ggaaacaatggtaatgccagaaaaaaccaaaatgtctgta-ttttcttattaatttcaaaaatctgcatg 31962617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 6203759 - 6204018
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| ||||||  |||||||||    
T  6203759 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagggtgatattt 6203858  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| ||||||||||||||||||            ||| |  ||||||||||||||    
T  6203859 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgact---gctttttttagtaccatttttccttggaaa 6203955  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  6203956 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 6204018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 35882619 - 35882881
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  35882619 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 35882718  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaa 228  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||| | |         |||||  |||||||||||||    
T  35882719 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac-tgctttttttttagtgccttttttccttggaa 35882817  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||| | ||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  35882818 ataatggtaatgccaaaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 35882881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 48467773 - 48468120
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  48467773 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 48467871  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||||||  |          |||||||||| ||||    
T  48467872 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgac--tactttttttaagtgctttttccctt 48467969  T
Q  225 ggaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    ||||| ||||||||||| || ||||||||||||| | | || ||||||||||||||||||| | | |||||                |||||||| ||||    
T  48467970 ggaaacaatggtaatgccagaaaaaaaccaaaacgtttgta-ttttcttattaatttcaaaaatccgcatg------aaaaaaaaaactctttct-aaaa 48468061  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  48468062 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 48468120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 5015558 - 5015907
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||| ||||||||||||| ||| || ||||    
T  5015558 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcatctcgctctgcccaaagagagagtg 5015656  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacg---actttcannnnnnnnagtgcttttt-c 221  Q
    |||||||||| |||||| ||||||||||||||| |||||| || |||||||  | |||||||||| ||||   |||||          |||||||||| |    
T  5015657 atattttctgtaagggcgtgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactactttttctttttttagtgctttttcc 5015756  T
Q  222 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaa 321  Q
    |||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||    
T  5015757 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttct-aa 5015846  T
Q  322 aatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    || ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  5015847 aaccatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5015907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 35 - 281
Target Start/End: Complemental strand, 8287876 - 8287628
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  8287876 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 8287777  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttggaaata 231  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| ||||||||||||||||||             |   ||||||||||||||||    
T  8287776 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgactgcttttttttagcgccttttttccttggaaata 8287677  T
Q  232 atggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttc 281  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||    
T  8287676 atggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttc 8287628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 4795037 - 4794780
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  4795037 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 4794938  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| |||||||||    
T  4794937 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact----gcttttttagtgctttttcccttggaaa 4794842  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| | ||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  4794841 taatggtaatgcca-aaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 4794780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 35 - 284
Target Start/End: Complemental strand, 15739499 - 15739248
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 132  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||  ||||||||||||||||||||||||||| |||||| |||||||||    
T  15739499 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatt 15739400  T
Q  133 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaa 228  Q
    ||||| |||||||||||||||||||||| |||||| || ||| |||||| ||||||||||||||||||            ||| |  ||||| |||||||    
T  15739399 ttctgtaagggcatgtttgtttcggcattgccgttgattaatgaaaaattgtcgtttctttcacgact---gctttttttagtacctttttttcttggaa 15739303  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  15739302 ataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 15739248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 15891111 - 15890852
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||  ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  15891111 tcaatcatgcatgtttttgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctacccaaagcgagagtgatattt 15891012  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat--aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttggaaa 229  Q
    |||| |||||||||||||||||||||| | |||| || |||  |||||| ||||||||||||||||||   |        ||||| ||||||||||||||    
T  15891011 tctgtaagggcatgtttgtttcggcattgtcgttaattaataaaaaaattgtcgtttctttcacgactgcta---tttttagtgcttttttccttggaaa 15890915  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  15890914 taatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 15890852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 28341025 - 28341370
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||| || | ||||||||  |||||||||||||||||||||||||| || ||| ||||    
T  28341025 cattccttcaatcatgcatgtttctgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaaacgagagtg 28341124  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  28341125 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 28341221  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||  ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  28341222 ggaaacaatggtaatgccagaaaaaaccaaaatgtctgta-ttttcttattaatttcaaa-atctgcatg-------aaaaaaaaactctttct-aaaat 28341311  T
Q  325 catcc-aatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||| |||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  28341312 catccaaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 35 - 280
Target Start/End: Original strand, 18332481 - 18332725
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||| ||| | ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  18332481 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtatcttgtttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatatttt 18332580  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaat 230  Q
    ||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| ||||||||||    
T  18332581 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact----gcttttttagtgctttttcccttggaaat 18332676  T
Q  231 aatggtaatgctagaaaaaaccaaaacatctttatttttcttattaattt 280  Q
    ||||||||||| |||||||||||||| |||| || |||||||||||||||    
T  18332677 aatggtaatgccagaaaaaaccaaaatatctgta-ttttcttattaattt 18332725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 18275457 - 18275198
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  18275457 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 18275358  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaata 231  Q
    ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||| ||  |          |||||||||| ||| ||||| |    
T  18275357 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacaac--tacttttttttagtgctttttccctaggaaaca 18275260  T
Q  232 atggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||||||| | ||||||    
T  18275259 atggtaatgccagaaaaaaccaaaacgtctgtatttttcttattaatttcaaaaatctgcat 18275198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 18290758 - 18290499
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  18290758 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 18290659  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaata 231  Q
    ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||| ||  |          |||||||||| ||| ||||| |    
T  18290658 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacaac--tacttttttttagtgctttttccctaggaaaca 18290561  T
Q  232 atggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||||||| | ||||||    
T  18290560 atggtaatgccagaaaaaaccaaaacgtctgtatttttcttattaatttcaaaaatctgcat 18290499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 18306059 - 18305800
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  18306059 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 18305960  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaata 231  Q
    ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| ||| ||  |          |||||||||| ||| ||||| |    
T  18305959 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacaac--tacttttttttagtgctttttccctaggaaaca 18305862  T
Q  232 atggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||||||| | ||||||    
T  18305861 atggtaatgccagaaaaaaccaaaacgtctgtatttttcttattaatttcaaaaatctgcat 18305800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 29147160 - 29146901
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||||||||||| ||||||||| |||||| ||||||||||    
T  29147160 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctcttgctctgcccaaagcgagagtgatattt 29147061  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt--ccttggaa 228  Q
    |||| |||||||||||||||||||||| ||| || || ||||||||  | |||||||||| |||||||            ||||||||||  ||||||||    
T  29147060 tctgtaagggcatgtttgtttcggcattgccattgattaataaaaattttgtcgtttcttccacgact----gcttttttagtgctttttccccttggaa 29146965  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    || |||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  29146964 atgatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 29146901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 284
Target Start/End: Complemental strand, 22385983 - 22385732
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 132  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||  ||||||||||||| ||||||||||||| |||||| |||||||||    
T  22385983 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatatt 22385884  T
Q  133 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaa 228  Q
    ||||| |||||||||||||||||| ||| |||||| || ||| ||||  | |||||||||| || |||| |          |||||||||| ||||||||    
T  22385883 ttctgtaagggcatgtttgtttcgacattgccgttgattaatgaaaattttgtcgtttcttccatgactgt---tttttttagtgctttttcccttggaa 22385787  T
Q  229 ataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaa 284  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  22385786 ataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaa 22385732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 4723484 - 4723745
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||| ||||||||||||| |||||| | ||||||||    
T  4723484 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagaatgatattt 4723583  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc--tttttccttggaaa 229  Q
    |||  |||||||||||||||||||||| |||||| || ||| |||||| ||||||||||||||||| | |         ||| |  ||||| ||||||||    
T  4723584 tctataagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac-tgctttttttttagtacctttttttcttggaaa 4723682  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| |||||||||||||| |||| || ||||||||||||||||||| | ||||||    
T  4723683 taatggtaatgccagaaaaaaccaaaatatctgta-ttttcttattaatttcaaaaatctgcat 4723745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 18053115 - 18053374
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    |||| |||||||||||| ||||||| |   ||||||||||||| | ||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||    
T  18053115 tcaaccatgcatgtttctgagtaatatacgttgttgcttaagtatcttgttttttcaaaataacaatcttctcgctctgcccaaagcgagagtgatattt 18053214  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||||||| |||||||||    
T  18053215 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttcttccacgact----gcttttttagtgctttttcccttggaaa 18053310  T
Q  230 taatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||| || ||||||||||||||||| || ||||||||||||||| ||| | ||||||    
T  18053311 taatggtaatgccagaaaaaaaccaaaacatctata-ttttcttattaattttaaaaatctgcat 18053374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 5714114 - 5714191
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5714114 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 5714191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 5725024 - 5725101
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5725024 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 5725101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 5767344 - 5767267
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5767344 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 5767267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 17993149 - 17993072
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  17993149 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttcttatcaatttcaaagaactgcat 17993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 31962593 - 31962523
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  31962593 ctctttctaaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 31962523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 311 - 382
Target Start/End: Original strand, 10398267 - 10398337
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  10398267 ctctttctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10398337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 5653348 - 5653411
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||||||||||| |||||||||||    
T  5653348 ctctttctaaaa-tcatccaaccattttacgcagattgagccataataaacccgttgaacacagt 5653411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 18275190 - 18275120
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  18275190 ctctttctaaaaatcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 18275120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 18290491 - 18290421
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  18290491 ctctttctaaaaatcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 18290421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 18305792 - 18305722
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  18305792 ctctttctaaaaatcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 18305722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 16622628 - 16622576
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||| |||||||    
T  16622628 ctctttctaaaaatcatccaaccattttacgcagattgagccatagtaaaccc 16622576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 19696614 - 19696665
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  19696614 ctctttctaaaa-tcatccaaccattttacgcagattgaaccataataaaccc 19696665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 4723754 - 4723823
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||||||| |||  |||||| |||||    
T  4723754 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 4723823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 4794768 - 4794703
Alignment:
Q  315 ttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||| |||  |||||| |||||    
T  4794768 ttctaaaa-tcatccaatcattttacgcagattgaactataataaacccgttgggcacagtaatcct 4794703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 5714220 - 5714282
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  5714220 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 5714282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 5725130 - 5725192
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  5725130 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 5725192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 5767238 - 5767176
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  5767238 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 5767176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 17993044 - 17992982
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  17993044 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 17992982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 32293775 - 32293837
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  32293775 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 32293837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Original strand, 4626927 - 4626994
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  4626927 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 4626994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 6204026 - 6204077
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  6204026 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 6204077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 8287607 - 8287544
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| |||||||| |||| ||||||||||| || ||||||||||| ||| |||||||    
T  8287607 ctctttctaaaa-tcatccaaccattttacgcagattggactataataaacccgttggacacagt 8287544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 8298094 - 8298145
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  8298094 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 8298145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 15890842 - 15890791
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  15890842 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 15890791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 18053385 - 18053436
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    ||| |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  18053385 ctccttctaaaa-tcatccaatcattttacgcagattgaactataataaaccc 18053436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 18332760 - 18332811
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| ||||||||||||| |||||||||||||| ||||| |||||    
T  18332760 ctctttctaaaa-tcatccaatcattttacgcagattgaactataatgaaccc 18332811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 22385715 - 22385664
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  22385715 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 22385664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 382
Target Start/End: Complemental strand, 31033354 - 31033287
Alignment:
Q  314 tttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||| |||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  31033354 tttctaaaa-tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31033287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 32441274 - 32441325
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  32441274 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 32441325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 35882889 - 35882940
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  35882889 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 35882940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 16625013 - 16624978
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgt 63  Q
    ||||| ||||||||||||||||||||||||||||||    
T  16625013 cattccttcaatcatgcatgtttccgagtaatgtgt 16624978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 20068163 - 20068232
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| ||||| |||  |||||| |||||    
T  20068163 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 20068232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 15739231 - 15739180
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| ||||||||| |||| |||||||||||    
T  15739231 ctctttctaaaa-tcatccaaccattttacgcagatcgaactataataaaccc 15739180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 29146893 - 29146842
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| | || |||||||||||||| |||||||||||    
T  29146893 ctctttctaaaa-tcatccaaccgttttacgcagattgaactataataaaccc 29146842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 9834 - 10181
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  9834 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 9933  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-cctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |        |||||||||| ||||    
T  9934 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---actttttttagtgctttttccctt 10030  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                ||||||||||||||    
T  10031 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttctaaaaat 10123  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  10124 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 28 - 280
Target Start/End: Complemental strand, 2145 - 1885
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  2145 cattccttcaatcatgcatgtttccgaataatgtgtcttgttgattaaatgttttgtttttcaaaataaccatcctctcgctcggcccgaagcgaaagtg 2046  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgactttca-----nnnnnnnnagtgcttttt-- 220  Q
    ||| ||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| |||| |             ||||||||||      
T  2045 ata-tttctggaagggcgtgtttgtttcggcattcccgttatcaataaaaatcgtcgtttctttcacggcttttattattttttttctagtgcttttttc 1947  T
Q  221 --ccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaattt 280  Q
       |||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||    
T  1946 tctcttggaaataatggtaataccagaaaaaaccaaaacatctgtattttttttattaattt 1885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 1860 - 1797
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagt 375  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  1860 ctctttctaaaa-tcatccaaccattttacgcagattgaaccataataaacccgttgaacacagt 1797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 24572 - 24215
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  24572 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24474  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt--cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |         ||||||||||  |||    
T  24473 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacctttttttttagtgcttttttccct 24374  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatg--nnnnnnnnnnnnnnnnctctttctaaa 321  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||| |||||||                  |||||||| ||    
T  24373 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaagatctgcatgaaaaaaaaaaaaaaaaaactctttct-aa 24276  T
Q  322 aatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  24275 aatcatccaatcattatatgcaggttgaaccataataaaccctttgaacacagtaatccta 24215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 28 - 381
Target Start/End: Complemental strand, 13301 - 12953
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| |||||||||||||||||| || | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  13301 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgttttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 13203  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttc-annnnnnnnagtgcttttt-cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||| |          |||||||||| |||    
T  13202 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgacttacttttttttttagtgctttttccct 13103  T
Q  224 tggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaa 323  Q
    |||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| ||||    
T  13102 tggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg------aaaaaaaaaactctttct-aaaa 13011  T
Q  324 tcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||    
T  13010 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 120; Significance: 3e-61; HSPs: 5)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 45349 - 45093
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| ||||||||||     
T  45349 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattta 45250  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgcttttt-ccttggaaa 229  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | ||||||||||||||||||            |||||||||| |||||||||    
T  45249 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttctttcacgact------gcttttagtgctttttcccttggaaa 45156  T
Q  230 taatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  45155 taatggtaatgctagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 45093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 31649 - 31913
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  31649 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 31748  T
Q  135 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa-------tcgtcgtttctttcacgactttcannnnnnnnagtgc-tttttccttg 225  Q
    ||| ||||||| |||||||||||||| |||||| || ||||||||       | ||||||||||||||||||   |        ||||| ||||||||||    
T  31749 ctgtaagggcacgtttgtttcggcattgccgttgattaataaaaaaaatttgttgtcgtttctttcacgactgcta---tttttagtgcttttttccttg 31845  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttctta-ttaatttcaaagagctgcat 293  Q
    |||||||||||||||| | ||||||||||||||||| || |||||||| ||||||||||| | ||||||    
T  31846 gaaataatggtaatgccataaaaaaccaaaacatctgta-ttttcttatttaatttcaaaaatctgcat 31913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 38433 - 38168
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaa-gtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 132  Q
    ||||||||||||||||| ||||||| |  |||||||||||| || | |||||||| ||||||||||||||||  ||||||||| |||||| |||||||||    
T  38433 tcaatcatgcatgtttctgagtaatataccttgttgcttaaagtatcttgttttttcaaaataacaatcctcctgctctgcccaaagcgagagtgatatt 38334  T
Q  133 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgactttcannnnnnnnagtgc-----tttttccttg 225  Q
    ||||| ||||||| |||||||||||||| |||||| || ||| |||||| ||||||||||||||||| | |         |||||     ||||||||||    
T  38333 ttctgtaagggcacgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac-tgctttttttttagtgcttttttttttccttg 38235  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||| | ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  38234 gaaataatggtaatcccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 38168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 45085 - 45034
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  45085 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 45034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 38160 - 38109
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||| |||||    
T  38160 ctctttctaaaa-tcatccaaccattttacgcagattgaactataatgaaccc 38109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 117; Significance: 2e-59; HSPs: 4)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 7560 - 7203
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || ||||||||  ||||||||||| |||||||||||||| |||||| ||||    
T  7560 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaattctctcgctctgcccaaagcgagagtg 7461  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact--ttcannnnnnnnagtg-ctttttcc 222  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  ||          |||| ||||| ||    
T  7460 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttttagtgccttttccc 7361  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaa 322  Q
    ||||||| ||||||||||| ||||||||||||||  ||| || ||||||||||||||||||| | |||||||                |||||||| |||    
T  7360 ttggaaacaatggtaatgccagaaaaaaccaaaatgtctgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaactctttct-aaa 7263  T
Q  323 atcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  7262 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 7203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 21113 - 20756
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||| | || ||||||||  ||||||||||| |||||||||||||| |||||| ||||    
T  21113 cattccttcaatcatgcatgtttttgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaattctctcgctctgcccaaagcgagagtg 21014  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact--ttcannnnnnnnagtg-ctttttcc 222  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  ||          |||| ||||| ||    
T  21013 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttttagtgccttttccc 20914  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaa 322  Q
    ||||||| ||||||||||| ||||||||||||||  ||| || ||||||||||||||||||| | |||||||                |||||||| |||    
T  20913 ttggaaacaatggtaatgccagaaaaaaccaaaatgtctgta-ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaactctttct-aaa 20816  T
Q  323 atcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  20815 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 20756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 28 - 281
Target Start/End: Original strand, 11416 - 11673
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  11416 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 11515  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgact-ttcannnnnnnnagtgcttttt-cct 223  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||  |          |||||||||| |||    
T  11516 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttaagtgctttttccct 11615  T
Q  224 tggaaataatggtaatgctag-aaaaaaccaaaacatctttatttttcttattaatttc 281  Q
    |||||| ||||||||||| || ||||||||||||| ||| || ||||||||||||||||    
T  11616 tggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta-ttttcttattaatttc 11673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 118 - 382
Target Start/End: Original strand, 21562 - 21828
Alignment:
Q  118 agcgaaagtgatattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatc-gtcgtttctttcacgact--ttcannnnnnnnagt 213  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||||| || ||||||| |  |||||||||| |||||||  ||          |||    
T  21562 agcgagagtgatattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgactacttttttttttttagt 21661  T
Q  214 gctttttcc-ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnct 312  Q
    || |||||| ||||||| ||||||||||| ||||||||||||||  ||| |||||| ||||||||||||||| | |||||||                ||    
T  21662 gccttttcccttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt-cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaa-ct 21759  T
Q  313 ctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  21760 ctttctaaaa-tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 21828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 7900 - 8243
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  7900 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 7998  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctt-tttcctt 224  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||   |          ||||| || ||||    
T  7999 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttcttccacgact---acttttttagttgcttcttccctt 8095  T
Q  225 ggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaaat 324  Q
    ||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||||    
T  8096 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--------aaaaaaaactctttct-aaaat 8185  T
Q  325 catccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||    
T  8186 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 8243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 114; Significance: 1e-57; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 45987 - 45862
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45987 cattccttcaatcatgcatatttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 45888  T
Q  128 atattttctggaagggcatgtttgtt 153  Q
    |||||||||| |||||||||||||||    
T  45887 atattttctgtaagggcatgtttgtt 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 32344 - 32613
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt----tcaaaataacaatcctctcgctctgcccgaagcgaaagtgata 130  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||    |||||||||||||||||||||||||||| |||||| |||||||    
T  32344 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgata 32443  T
Q  131 ttttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgact--ttcannnnnnnnagtgc--tttttcct 223  Q
    ||||||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||  |||         |||||  ||||||||    
T  32444 ttttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgactgcttc-ttttttttagtgccttttttcct 32542  T
Q  224 tggaaataatggtaatgctag--aaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    |||||||||||||||||| ||  ||||||| ||||||||| || ||||||||||||||||||| | ||||||    
T  32543 tggaaataatggtaatgccagaaaaaaaacaaaaacatctgta-ttttcttattaatttcaaaaatctgcat 32613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 32621 - 32690
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcct 381  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||||||| |||  |||||| |||||    
T  32621 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 32690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 28 - 293
Target Start/End: Complemental strand, 5608 - 5345
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 127  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  5608 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 5510  T
Q  128 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgctttttccttg 225  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||| |||||||| |         |||||||||||| |     
T  5509 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaactttgtcgtttcttccacgacttac-ttttttttagtgctttttccctt 5411  T
Q  226 gaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    | |||||||||||||| ||||| ||||||||| ||| || ||||||||||||||||||| | ||||||    
T  5410 g-aataatggtaatgccagaaagaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcat 5345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 28 - 382
Target Start/End: Original strand, 11451 - 11803
Alignment:
Q  28 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgctt-aagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagt 126  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||| || || |||||||| ||||||||||||||||||||||||||| |||||| ||     
T  11451 cattccttcaatcatgcatgtttctgagtaatgcgtcttgttgctttaaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagc 11549  T
Q  127 gatattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgactttcannnnnnnnagtgcttttt--cc 222  Q
    ||||||||||| |||||||||||||||||||||| ||| || || |||||||  | ||||| |||| ||||||  |          ||||||||||  ||    
T  11550 gatattttctgtaagggcatgtttgtttcggcattgccattgattaataaaattttgtcgtctcttccacgac--tacttttttttagtgcttttttccc 11647  T
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctctttctaaaa 322  Q
    ||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| | |||||||                |||||||| |||    
T  11648 ttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-ttttcttattaatttcaaaaatctgcatg--aaaaaaaaaaaaaactctttct-aaa 11743  T
Q  323 atcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  11744 atcatccaatcattatatgcagattgaaccataataaacccgttgaacacagtaatccta 11803  T

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Target: scaffold0143 (Bit Score: 105; Significance: 2e-52; HSPs: 5)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 35 - 293
Target Start/End: Original strand, 29185 - 29447
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 133  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  29185 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 29284  T
Q  134 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgactttcannnnnnnnagtgc----tttttccttgg 226  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| |||||||            |||||    |||||||||||    
T  29285 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gctttttttagtgccctttttttccttgg 29381  T
Q  227 aaataatggtaatgctagaaaaaaccaaaacatctttatttttcttattaatttcaaagagctgcat 293  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  29382 aaataatggtaatgccagaaaaaaccaaaacatctgta-ttttcttattaatttcaaaaatctgcat 29447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 7146 - 7208
Alignment:
Q  320 aaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatccta 382  Q
    |||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||| ||||||    
T  7146 aaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 7208  T

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Target: scaffold0143; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 7049 - 7120
Alignment:
Q  223 ttggaaataatggtaatgctagaaaaaaccaaaacatctttattttt--cttattaatttcaaagagctgcat 293  Q
    |||||||||||| |||| | |||||||||||||||||||||||||||   |||| ||||||||||| ||||||    
T  7049 ttggaaataatg-taataccagaaaaaaccaaaacatctttattttttctttatcaatttcaaagaactgcat 7120  T

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Target: scaffold0143; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 29455 - 29506
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  29455 ctctttctaaaa-tcatccaaccattttacgcagattgaactataataaaccc 29506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 18254 - 18305
Alignment:
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccc 363  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||| |||||||    
T  18254 ctctttctaaaa-tcatccaaccattttacgcagattgagccatagtaaaccc 18305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1697 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold1697
Description:

Target: scaffold1697; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 804 - 696
Alignment:
Q  35 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatttt 134  Q
    |||||||||||||||||| |||||| |||| |||||||  |||||| | |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  804 tcaatcatgcatgtttccaagtaatatgtcatgttgctcgagtgttgtatttttcaaaataacaatcctttcgctctgcccgaagcgaaagtgaaatttt 705  T
Q  135 ctggaaggg 143  Q
    ||| |||||    
T  704 ctgtaaggg 696  T

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Target: scaffold1697; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 391
Target Start/End: Complemental strand, 612 - 443
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnnctct 314  Q
    ||||| |||||||||||||||||| | ||||||||||||||| ||| || |||||||||||||||||||| | |||||||                ||||    
T  612 ttttttcttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaacctgcatg------aaaaaaaaaactct 519  T
Q  315 ttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||  ||| ||||| ||| |||||    
T  518 ttct-aaaatcatccaatcattatatgcaggttgaaccataataaacccattgaacgtagtaatcctgtgcctcttc 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0748 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0748
Description:

Target: scaffold0748; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 213 - 391
Target Start/End: Complemental strand, 6857 - 6683
Alignment:
Q  213 tgctttttccttggaaataatggtaatgctagaaaaaa-ccaaaacatctttattttt-cttattaatttcaaagagctgcatgnnnnnnnnnnnnnnnn 310  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||| ||| ||||||| ||||||||||||||| | |||||||                    
T  6857 tgctttttccttggaaataatggtaataccagaaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgaaaaaaaaaag----- 6763  T
Q  311 ctctttctaaaaatcatccaatcattatacgcagattgaaccataataaaccccttgaacacagtgatcctatgcttcttc 391  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  6762 ctctttctaaaa-tcatccaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgcttcttc 6683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 20370 - 20293
Alignment:
Q  216 tttttccttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttcttatt-aatttcaaagagctgcat 293  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| |||||| |||||| ||||||||| | ||||||    
T  20370 tttttccttggaaataatggtaatgccataaaaaaccaaaacatctgtatttt-cttatttaatttcaaaaatctgcat 20293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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