View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0679_low_36 (Length: 230)

Name: NF0679_low_36
Description: NF0679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0679_low_36
NF0679_low_36
[»] chr6 (7 HSPs)
chr6 (2-165)||(1646980-1647143)
chr6 (2-165)||(23998200-23998363)
chr6 (2-165)||(16380539-16380702)
chr6 (2-165)||(16648135-16648298)
chr6 (2-165)||(14130421-14130584)
chr6 (2-165)||(16099961-16100130)
chr6 (2-97)||(23025912-23026007)
[»] chr2 (7 HSPs)
chr2 (2-165)||(24829749-24829912)
chr2 (2-165)||(24568229-24568392)
chr2 (29-165)||(22279824-22279960)
chr2 (2-158)||(25130335-25130491)
chr2 (2-165)||(22760130-22760293)
chr2 (36-155)||(10037927-10038046)
chr2 (36-155)||(10098312-10098431)
[»] chr1 (7 HSPs)
chr1 (2-165)||(20927157-20927320)
chr1 (2-165)||(20829485-20829648)
chr1 (10-165)||(20527156-20527311)
chr1 (2-160)||(41215949-41216107)
chr1 (8-109)||(22133855-22133956)
chr1 (28-153)||(21200998-21201123)
chr1 (2-71)||(35930918-35930987)
[»] scaffold0302 (2 HSPs)
scaffold0302 (2-165)||(7272-7435)
scaffold0302 (10-165)||(330-485)
[»] scaffold0225 (1 HSPs)
scaffold0225 (2-165)||(25513-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (2-165)||(15027-15190)
scaffold0162 (2-165)||(11198-11361)
[»] chr8 (10 HSPs)
chr8 (2-165)||(16875559-16875722)
chr8 (2-165)||(21848801-21848964)
chr8 (2-165)||(22436457-22436620)
chr8 (2-160)||(20650819-20650977)
chr8 (2-165)||(23155506-23155667)
chr8 (2-165)||(21195004-21195166)
chr8 (19-160)||(23902323-23902464)
chr8 (2-108)||(16414302-16414408)
chr8 (14-146)||(19869866-19869998)
chr8 (58-132)||(23887215-23887289)
[»] chr7 (10 HSPs)
chr7 (2-165)||(7825977-7826140)
chr7 (2-165)||(27105804-27105967)
chr7 (2-165)||(27172358-27172521)
chr7 (2-165)||(17925727-17925890)
chr7 (2-158)||(13378969-13379123)
chr7 (2-165)||(4442005-4442168)
chr7 (10-165)||(13458112-13458267)
chr7 (18-157)||(15716949-15717088)
chr7 (50-155)||(17143354-17143459)
chr7 (58-146)||(39232-39320)
[»] chr5 (4 HSPs)
chr5 (2-165)||(23507686-23507849)
chr5 (2-165)||(24583212-24583375)
chr5 (2-165)||(21935391-21935554)
chr5 (24-155)||(20250509-20250640)
[»] chr3 (8 HSPs)
chr3 (2-165)||(8272659-8272822)
chr3 (2-165)||(15611820-15611983)
chr3 (2-165)||(30139523-30139686)
chr3 (2-165)||(30149074-30149237)
chr3 (2-165)||(13965612-13965775)
chr3 (2-158)||(15948730-15948886)
chr3 (2-165)||(6151113-6151276)
chr3 (2-165)||(25768035-25768198)
[»] scaffold0266 (1 HSPs)
scaffold0266 (2-160)||(7885-8043)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-165)||(42377-42540)
[»] scaffold0218 (2 HSPs)
scaffold0218 (2-157)||(1976-2131)
scaffold0218 (13-165)||(26446-26598)
[»] scaffold0077 (1 HSPs)
scaffold0077 (2-165)||(26290-26453)
[»] chr4 (2 HSPs)
chr4 (2-157)||(15291179-15291334)
chr4 (28-165)||(12340912-12341049)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-165)||(8867-9013)
[»] scaffold0124 (1 HSPs)
scaffold0124 (2-165)||(5830-5995)
[»] scaffold0561 (1 HSPs)
scaffold0561 (2-165)||(7029-7192)
[»] scaffold0170 (1 HSPs)
scaffold0170 (2-165)||(34204-34367)
[»] scaffold0120 (1 HSPs)
scaffold0120 (2-165)||(24295-24458)
[»] scaffold0610 (1 HSPs)
scaffold0610 (2-160)||(6953-7111)
[»] scaffold1488 (1 HSPs)
scaffold1488 (2-157)||(827-982)
[»] scaffold0467 (1 HSPs)
scaffold0467 (2-165)||(1645-1808)
[»] scaffold0387 (1 HSPs)
scaffold0387 (2-165)||(16177-16340)
[»] scaffold0021 (3 HSPs)
scaffold0021 (2-165)||(21871-22034)
scaffold0021 (2-165)||(31447-31610)
scaffold0021 (60-165)||(7333-7438)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-165)||(132513-132676)
scaffold0008 (10-109)||(25942-26041)
[»] scaffold0692 (1 HSPs)
scaffold0692 (2-165)||(1908-2071)
[»] scaffold0876 (1 HSPs)
scaffold0876 (2-160)||(970-1128)
[»] scaffold0092 (1 HSPs)
scaffold0092 (13-153)||(238-378)
[»] scaffold0369 (1 HSPs)
scaffold0369 (2-140)||(6888-7026)
[»] scaffold0462 (1 HSPs)
scaffold0462 (2-106)||(2117-2221)
[»] scaffold0719 (1 HSPs)
scaffold0719 (24-86)||(4785-4847)
[»] scaffold0465 (1 HSPs)
scaffold0465 (2-60)||(13649-13707)
[»] scaffold0635 (1 HSPs)
scaffold0635 (36-155)||(9024-9143)
[»] scaffold0827 (1 HSPs)
scaffold0827 (58-119)||(5271-5332)


Alignment Details
Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 1646980 - 1647143
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||    
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 1647143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 23998363 - 23998200
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 23998200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 16380539 - 16380702
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16380702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 16648135 - 16648298
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16648298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 14130584 - 14130421
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| ||||||| |||||||| |||| ||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    || || ||  ||||| || ||||| |||||||||| ||||||||||||| ||||||||| ||||    
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtg 14130421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 16100130 - 16099961
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||| || ||||||||||||||||||||||||  |||| ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  102 tgcgccagaagtctttatc------gaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    || |||||  |||||||||      || || |||||||||||||||||||| ||| ||||||||| ||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtg 16099961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 23025912 - 23026007
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtat 97  Q
    ||||||| ||||||| ||||||||||||||||||||||||  |||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 24829749 - 24829912
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 24829912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 24568229 - 24568392
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||  |||  ||||| || || || |||||||||||||||||||||||||||||||||| ||||    
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtg 24568392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 22279960 - 22279824
Alignment:
Q  29 atatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaatacat 128  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||    
T  22279960 atatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccatgtgtctttatggaatacat 22279861  T
Q  129 gaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  22279860 gaatagaatattttatccttatctggaccgttttgtg 22279824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 25130491 - 25130335
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccg 158  Q
    ||||||||  |||||  | ||||| ||||||||||||||||||||||  ||||||||    
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccg 25130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 22760130 - 22760293
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||  ||| ||||||||||| ||||||||||||||||||||||||||||||||  |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||| ||  ||||| || || || ||||||||||||||||||||||| |||||||||| ||||    
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtg 22760293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 10037927 - 10038046
Alignment:
Q  36 caaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaatacatgaataga 135  Q
    |||||| || || |||||||||||||| || ||||| || | ||||||| ||||||| ||  |||||||||  |  ||||| || |||||||||||||||    
T  10037927 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10038026  T
Q  136 atatttcatccttatctgga 155  Q
    || || ||||||||| ||||    
T  10038027 atcttccatccttatttgga 10038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 10098312 - 10098431
Alignment:
Q  36 caaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaatacatgaataga 135  Q
    |||||| || || |||||||||||||| || ||||| || | ||||||| ||||||| ||  |||||||||  |  ||||| || |||||||||||||||    
T  10098312 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10098411  T
Q  136 atatttcatccttatctgga 155  Q
    || || ||||||||| ||||    
T  10098412 atcttccatccttatttgga 10098431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 20927320 - 20927157
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtg 20927157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 20829485 - 20829648
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 20829648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 165
Target Start/End: Complemental strand, 20527311 - 20527156
Alignment:
Q  10 attagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccag 109  Q
    ||||||| |||||| ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  20527311 attagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 20527212  T
Q  110 aagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
      |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  20527211 gtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtg 20527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 41215949 - 41216107
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| ||||| | |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    ||||||||  || || ||  |||| |||||||||||||||||||||| |||||||||||    
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgtt 41216107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 22133855 - 22133956
Alignment:
Q  8 atattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgcc 107  Q
    |||||||||  |||||||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  22133855 atattagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgcc 22133954  T
Q  108 ag 109  Q
    ||    
T  22133955 ag 22133956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 21200998 - 21201123
Alignment:
Q  28 gatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaataca 127  Q
    |||||||||||||| |||||||||||||| ||||| || ||||| |||||||||||||||||| | ||  ||||| ||||    ||||| || ||||| |    
T  21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata 21201097  T
Q  128 tgaatagaatatttcatccttatctg 153  Q
    ||||||||||||||||||||||||||    
T  21201098 tgaatagaatatttcatccttatctg 21201123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatga 71  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 7435 - 7272
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  || ||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 7272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 165
Target Start/End: Complemental strand, 485 - 330
Alignment:
Q  10 attagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccag 109  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  485 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaatgcgccag 386  T
Q  110 aagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
      || ||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  385 gtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 25676 - 25513
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 25513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 15190 - 15027
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 15027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 11198 - 11361
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||| |||||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 11361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 6e-64; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 16875559 - 16875722
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16875722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 21848801 - 21848964
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  |||||| |||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 21848964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 22436620 - 22436457
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  ||||| || ||||| |||||||||||||||||||||||||||||||||| ||||    
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtg 22436457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 20650819 - 20650977
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    ||||||||  ||||| || || || ||||||||||||||| ||||||||||||||||||    
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgtt 20650977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 23155506 - 23155667
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| | | ||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggaca--ctgagtattctgtgatgccatttggagcacccaa 23155603  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||| ||  ||||| || ||||| |||||||||||||||||||||||| ||||||||| ||||    
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtg 23155667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 21195004 - 21195166
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| |||||||| ||||||||||| |||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  102 tgcgccagaagt-ctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    || |||||  || ||| || ||||| |||||||||||||||||||||||||||||||||| ||||    
T  21195104 tgtgccag--gtacttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 21195166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 23902464 - 23902323
Alignment:
Q  19 aaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtcttta 118  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| | ||  ||||| |    
T  23902464 aaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttca 23902365  T
Q  119 tcgaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    | ||||| |||||||||||||||||||||| |||||||||||    
T  23902364 tggaatatatgaatagaatatttcatccttttctggaccgtt 23902323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 16414408 - 16414302
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||| |||||  ||||  |||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||    
T  16414408 atcatcatactagaggaaaggtagaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaa 16414309  T
Q  102 tgcgcca 108  Q
    |||||||    
T  16414308 tgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 19869998 - 19869866
Alignment:
Q  14 gagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagt 113  Q
    |||||||| ||||||||||||| || || || ||| ||||  | ||||| |||||||||||||| |||||||| |||||||| || || ||||||| |||    
T  19869998 gagcgaagtcggaagatatatcgaagactgccttcagaacccgttatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagt 19869899  T
Q  114 ctttatcgaatacatgaatagaatatttcatcc 146  Q
     ||||| || || ||||| ||||| || |||||    
T  19869898 gtttatggagtatatgaacagaattttccatcc 19869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 23887289 - 23887215
Alignment:
Q  58 tatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaatacatgaat 132  Q
    ||||||||||| |||||||| |||||||| || || ||  ||||||||||||| || ||||| || |||||||||    
T  23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaat 23887215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 6e-64; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 7826140 - 7825977
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 7825977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 27105804 - 27105967
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 27105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 27172521 - 27172358
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 27172358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 17925890 - 17925727
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| ||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  ||||| || ||||| |||||||||||||||||||||| ||| ||||||| ||||    
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtg 17925727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 13379123 - 13378969
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccg 158  Q
    ||||||||  ||||| ||  |||| ||||||||||||||||||||||||||||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 4442168 - 4442005
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||  ||||||||| ||| || |||||||||||||||||||| |||||||| ||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  ||||| || ||||| ||||||| |||||| ||||||| ||||||||||| ||||    
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtg 4442005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 165
Target Start/End: Complemental strand, 13458267 - 13458112
Alignment:
Q  10 attagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccag 109  Q
    ||||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||||| |||||||||| ||||||| ||||||||||||| ||||||||||    
T  13458267 attagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaatgcgccag 13458168  T
Q  110 aagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
      ||||| || ||||| |||||||||| ||| ||||||| || ||| |||| ||||    
T  13458167 gtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtg 13458112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 15716949 - 15717088
Alignment:
Q  18 gaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtcttt 117  Q
    ||||||||| |||||||||||||| ||||||||||| || ||||| || ||||| |||||||| |||||||||||  || |||||| |||    |||||     
T  15716949 gaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtcttc 15717048  T
Q  118 atcgaatacatgaatagaatatttcatccttatctggacc 157  Q
    || ||||| |||||||||||||| ||||||| ||||||||    
T  15717049 atggaatatatgaatagaatattccatccttttctggacc 15717088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 17143354 - 17143459
Alignment:
Q  50 gaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaatacatgaatagaatatttcatcctta 149  Q
    |||||||||||||||| ||||| ||||||| |||| ||||||| ||  ||||| |||| |  ||||| || ||||| ||||||||||| || ||||||||    
T  17143354 gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctta 17143453  T
Q  150 tctgga 155  Q
    | ||||    
T  17143454 tttgga 17143459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 39232 - 39320
Alignment:
Q  58 tatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaatacatgaatagaatatttcatcc 146  Q
    ||||| |||||||||||||| |||||||| |||||||| || || ||||||| ||| ||||| || || ||||| ||||| || |||||    
T  39232 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtttttatggagtatatgaacagaattttccatcc 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 23507849 - 23507686
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 23507686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 24583375 - 24583212
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  |||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 24583212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 21935391 - 21935554
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 21935554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 20250509 - 20250640
Alignment:
Q  24 ggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaa 123  Q
    ||||||||| || || || ||||| ||||| |||||||||||||||||||||| | | ||||||||||| ||| |||| | | |||    |||||| |||    
T  20250509 ggaagatatttctaagactgcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaa 20250608  T
Q  124 tacatgaatagaatatttcatccttatctgga 155  Q
    || |||||||| || || ||||||||| ||||    
T  20250609 tatatgaataggattttccatccttatttgga 20250640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 6e-64; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 8272659 - 8272822
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 8272822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 15611983 - 15611820
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||    
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 15611820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 30139686 - 30139523
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 30139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 30149237 - 30149074
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 30149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 13965612 - 13965775
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 13965775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 15948730 - 15948886
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccg 158  Q
    ||||||||  |||||||| ||||| |||||||||||||||||||||||| |||||||    
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccg 15948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 6151113 - 6151276
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| || || ||||||| |||||||||||||||||| ||||||| ||||    
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtg 6151276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 25768198 - 25768035
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| ||| || || |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    | ||||||  ||||| || ||||| |||||||||||||||||||||||||||||||||| ||||    
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 25768035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 7885 - 8043
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    ||| ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 8043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 42540 - 42377
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 42377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 1976 - 2131
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggacc 157  Q
    ||| ||||  |||||||| ||||| |||||||||||||||||||||||||||||||    
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 26598 - 26446
Alignment:
Q  13 agagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaag 112  Q
    |||| ||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||  |    
T  26598 agagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcgccaggtg 26499  T
Q  113 tctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||| || ||||| |||||||||||||||||||||| ||||||||||| ||||    
T  26498 tcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtg 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 26290 - 26453
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||| | |||| |||||||||| |||||||||||||||||||||||| ||||    
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtg 26453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 15291179 - 15291334
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggacc 157  Q
    ||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||    
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggacc 15291334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 165
Target Start/End: Original strand, 12340912 - 12341049
Alignment:
Q  28 gatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaataca 127  Q
    ||||||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||  ||||||||||||  ||||| || ||||| |    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  128 tgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||| ||||| ||||||| ||||||| ||| ||||    
T  12341012 tgaataggatattccatccttttctggactgttttgtg 12341049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 8867 - 9013
Alignment:
Q  19 aaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtcttta 118  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  8867 aaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtcttta 8966  T
Q  119 tcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    | | ||||||||||||||||||||||||||||||||| |||| ||||    
T  8967 tgggatacatgaatagaatatttcatccttatctggatcgttttgtg 9013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 5830 - 5995
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  102 tgcgccagaagtctttatcg-aatacatgaat-agaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtg 5995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 7029 - 7192
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| ||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||   |||| || ||||| |||||||||||||||||||||||| ||||||||| ||||    
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtg 7192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 34367 - 34204
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  ||||| || || || |||||||||||||||||||||||||||||||||| ||||    
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtg 34204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 24458 - 24295
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||| ||  |||||| | || || |||||||||||||||||||||||||||||||||| ||||    
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtg 24295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 6953 - 7111
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    ||| ||||  ||||| || || || ||||||| ||||||||||||||||||||||||||    
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgtt 7111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 827 - 982
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggacc 157  Q
    ||||||||  ||||| || ||||| |||||||||||||||||||||||| ||||||    
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggacc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 1645 - 1808
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||| |||||| |||||||||||||||||||||| ||||||||| | ||||||||||| || |||||||||||||| || ||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 1808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 16340 - 16177
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||  ||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||| |||  ||||| || ||||||||||||||||||||||| |||||||||||||||| ||||    
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtg 16177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 104; Significance: 5e-52; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 21871 - 22034
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||  |||||| ||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  ||||| || ||||| |||||||||||||||||||||||||||||| ||| ||||    
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtg 22034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 31447 - 31610
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||  |||||| ||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  ||||| || ||||| |||||||||||||||||||||||||||||| ||| ||||    
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtg 31610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 7438 - 7333
Alignment:
Q  60 tggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgt 159  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||  ||||| || || || ||||||| ||||||||||||||||||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  160 tctgtg 165  Q
    | ||||    
T  7338 tttgtg 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 132513 - 132676
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  ||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||||| |  |||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||    
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtg 132676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 26041 - 25942
Alignment:
Q  10 attagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccag 109  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||||||  ||||||||||    
T  26041 attagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaatgcgccag 25942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 1908 - 2071
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||  ||||| || || || |||||||||||||||||||||||||||||| ||| ||||    
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtg 2071  T

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Target: scaffold0876 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 970 - 1128
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||||||| | ||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    ||||||||   |||| || ||||| ||||||||||||||||||||||||||||||||||    
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgtt 1128  T

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Target: scaffold0092 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 378 - 238
Alignment:
Q  13 agagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaag 112  Q
    |||| |||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |    
T  378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 279  T
Q  113 tctttatcgaatacatgaatagaatatttcatccttatctg 153  Q
    |||| || || || |||||||||||||||||||||||||||    
T  278 tcttcatagagtatatgaatagaatatttcatccttatctg 238  T

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Target: scaffold0369 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||  |||||||||||||||| ||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  102 tgcgccagaagtctttatcgaatacatgaatagaatatt 140  Q
    ||| ||||  |||||||| ||||||||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

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Target: scaffold0462 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  102 tgcgc 106  Q
    |||||    
T  2121 tgcgc 2117  T

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Target: scaffold0719 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 4847 - 4785
Alignment:
Q  24 ggaagatatatccaaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgcc 86  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

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Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  2 atcatcatattagagcgaaggcggaagatatatccaaaaccgcgttccgaacgaggtat 60  Q
    ||||||| |||| || ||||||  |||||||||||||||||||||||||||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

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Target: scaffold0635 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 9143 - 9024
Alignment:
Q  36 caaaaccgcgttccgaacgaggtatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttatcgaatacatgaataga 135  Q
    |||||| || || |||||||||||||| || ||||| || | ||||||| ||||||| ||  |||||||||  |  ||||| || |||||||||||||||    
T  9143 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 9044  T
Q  136 atatttcatccttatctgga 155  Q
    || || ||||||||| ||||    
T  9043 atcttccatccttatttgga 9024  T

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Target: scaffold0827 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 5332 - 5271
Alignment:
Q  58 tatggacattatgagtattctgtgatgccatttggagtatctaatgcgccagaagtctttat 119  Q
    ||||| |||||||||||||| |||||||| |||||||| || || ||||||| ||| |||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttat 5271  T

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