View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0680_low_1 (Length: 879)
Name: NF0680_low_1
Description: NF0680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0680_low_1 |
 |  |
|
[»] scaffold0421 (1 HSPs) |
 |  |  |
|
[»] scaffold0246 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 419; Significance: 0; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 333 - 783
Target Start/End: Complemental strand, 16801224 - 16800774
Alignment:
Q |
333 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataaagttatggtcaacttaacaacaaaatataaaa |
432 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
T |
16801224 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataaaattatggtcaacttaacaacaaaatacaaaa |
16801125 |
T |
 |
Q |
433 |
ttaacttcataagttttttaagattctaacatgcgtcataatcttcaacgtcagaataatttgccaccactacaaccttaactgttgtgtgtttccgtgt |
532 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
16801124 |
ttaacttcataagttttttaagattctaacatgcgtcataatcttcaacgtcagaataatttgccaccaccacaaccttaactgttgtgtgtttccgtgt |
16801025 |
T |
 |
Q |
533 |
tcgtcttttgagaactcagagaagagaataacgttttagaatttcagaagaagtcaagtaatgtgttattttaattgcaatgacaacgtttcactacctt |
632 |
Q |
|
|
||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
16801024 |
tcgtcgtttcagaactcagagaagagtataacgttttagaatttcagaagaagtcaggtaatgtgttattttaattgcaatgacaacgtttcagtacctt |
16800925 |
T |
 |
Q |
633 |
ggacttcaagaaagaattgggttttgcaagaaaatgggcccaaaataaatgaaatgttttatttaacggaaattcggtcgagtttaccgagtttaacatg |
732 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16800924 |
ggacttcaagaaagaattgggttttgcaagaaaatgggcccaaaataaatgaaatgttttatttaacggaaattcggtcgagtttaccgagtttaacatg |
16800825 |
T |
 |
Q |
733 |
tgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaaccgagtt |
783 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16800824 |
tgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaaccgagtt |
16800774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 81 - 268
Target Start/End: Complemental strand, 16801474 - 16801289
Alignment:
Q |
81 |
ccaacaatatcaaggatataatcttttcaagttacgagtttgattttgactttattagcaattggttgcaaatatgcatattttgggttgcctttcaaaa |
180 |
Q |
|
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16801474 |
ccaacaatagcaaggatataatcttttcaagttacgagtttgattttgactttattagcaattggttgcaaatatgcatattttgggttgcctttcaaaa |
16801375 |
T |
 |
Q |
181 |
tcgagactctnnnnnnnggtttgcaactcgaaagtttacctcgactcattttatttatctacactcgaatcgtgaactcgtacaagtg |
268 |
Q |
|
|
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16801374 |
tcgagactctaaaaaa--gtttgcaactcgaaagtgtacctcgactcattttatttatctacactcgaatcgtgaactcgtacaagtg |
16801289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 333 - 439
Target Start/End: Complemental strand, 31914018 - 31913910
Alignment:
Q |
333 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataa--agttatggtcaacttaacaacaaaatataa |
430 |
Q |
|
|
||||||| ||||||| ||| |||||||| ||||||||||| |||||||||||| ||||||| ||||| ||||||| | |||||| || ||||||| || |
|
|
T |
31914018 |
gcaaataagtcaatagtgcaaaatatgacttaattataaagacaaagtatacataaccaccataataaagagttatgtttaacttagcatcaaaatacaa |
31913919 |
T |
 |
Q |
431 |
aattaactt |
439 |
Q |
|
|
||||||||| |
|
|
T |
31913918 |
aattaactt |
31913910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 719 - 784
Target Start/End: Original strand, 21238750 - 21238816
Alignment:
Q |
719 |
ccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||| ||| |||| ||| |||||||||||| |
|
|
T |
21238750 |
ccgagtttaacatgtgttaactcggtcaaactcgtcaaactttccgattttaccaaaaaccgagttt |
21238816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 715 - 776
Target Start/End: Complemental strand, 29964215 - 29964155
Alignment:
Q |
715 |
tttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||| ||||||||||||||| | ||||||||| ||||||||||| ||||||||||||| |
|
|
T |
29964215 |
tttaccgaatttaacatgtgttaacttggtcaaacttgtcaaacattc-aatttcaccaaaa |
29964155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 715 - 776
Target Start/End: Original strand, 30010583 - 30010643
Alignment:
Q |
715 |
tttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||| ||||||||||||||| | ||||||||| ||||||||||| ||||||||||||| |
|
|
T |
30010583 |
tttaccgaatttaacatgtgttaacttggtcaaacttgtcaaacattc-aatttcaccaaaa |
30010643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 721 - 776
Target Start/End: Original strand, 16497729 - 16497784
Alignment:
Q |
721 |
gagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||| |||||| ||||| |
|
|
T |
16497729 |
gagtttaacacatgttaagtcggtcaaactcgtcaaacattccgatttcagcaaaa |
16497784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 31561447 - 31561553
Alignment:
Q |
335 |
aaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataa--agttatggtcaacttaacaacaaaatataaaa |
432 |
Q |
|
|
||||||||||||| | | |||||||| ||||||||||| |||||||||||| || |||| ||||| |||| | ||||||||||| |||| || |||| |
|
|
T |
31561447 |
aaataggtcaataatacaaaatatgacttaattataaagacaaagtatacataactaccataataaagagttgtcttcaacttaacatcaaattacaaaa |
31561546 |
T |
 |
Q |
433 |
ttaactt |
439 |
Q |
|
|
||||||| |
|
|
T |
31561547 |
ttaactt |
31561553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 784
Target Start/End: Complemental strand, 19223128 - 19223054
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
||||||| |||||||||||| ||||||| ||||| | ||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
19223128 |
cgagttttccgagtttaacacgtgttaactcggttacactcgtcaaactttccgatttcaccaaaaaccgagttt |
19223054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 33892824 - 33892890
Alignment:
Q |
711 |
cgagtttac-cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||| |||||| ||||| |
|
|
T |
33892824 |
cgagtttacacgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaa |
33892890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 716 - 776
Target Start/End: Original strand, 2675062 - 2675122
Alignment:
Q |
716 |
ttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
||||||| ||||||| ||||||| ||||||||||||||||||| || |||||||||||| |
|
|
T |
2675062 |
ttaccgattttaacacgtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaa |
2675122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 713 - 784
Target Start/End: Complemental strand, 34909708 - 34909636
Alignment:
Q |
713 |
agtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaa-accgagttt |
784 |
Q |
|
|
|||||||||||||||||| | ||| | |||||||||||| |||||| ||| ||||||||||| ||||||||| |
|
|
T |
34909708 |
agtttaccgagtttaacacgcgttcactcggtcaaactcctcaaactttccgatttcaccaaagaccgagttt |
34909636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 36180145 - 36180038
Alignment:
Q |
335 |
aaataggtcaatattgcgaaatatgatttaattat-aaatgcaaagtatacatgaccaccaaaataaa--gttatggtcaacttaacaacaaaatataaa |
431 |
Q |
|
|
||||| ||||||| ||| |||||||| |||||||| ||| ||||||||||| ||| ||| | |||||| |||||| |||||||| || ||| ||| ||| |
|
|
T |
36180145 |
aaatatgtcaatagtgcaaaatatgacttaattataaaaggcaaagtatacctgatcactataataaagcgttatgctcaacttagcatcaagatacaaa |
36180046 |
T |
 |
Q |
432 |
attaactt |
439 |
Q |
|
|
|||||||| |
|
|
T |
36180045 |
attaactt |
36180038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 403
Target Start/End: Original strand, 4840959 - 4841028
Alignment:
Q |
335 |
aaataggtcaatattgcgaaatatgatttaattat-aaatgcaaagtatacatgaccaccaaaataaagt |
403 |
Q |
|
|
||||||||||||| ||| |||||||| |||||||| ||| ||||||||||||| || || | |||||||| |
|
|
T |
4840959 |
aaataggtcaatagtgcaaaatatgacttaattataaaaggcaaagtatacataactacaataataaagt |
4841028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 46; Significance: 9e-17; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 31996230 - 31996295
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
31996230 |
cgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaa |
31996295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 21199672 - 21199607
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| |||||| ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
21199672 |
cgagtttaccgagtttaacacatgttaactcggtcaaactcgtcaaactttccgatttcaccaaaa |
21199607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 706 - 784
Target Start/End: Original strand, 8779558 - 8779637
Alignment:
Q |
706 |
tcggtcgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||| |||||||||||||||||||| | ||||| | ||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
8779558 |
tcggacgagtttaccgagtttaacacgagttaacttggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
8779637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 776
Target Start/End: Original strand, 21010858 - 21010924
Alignment:
Q |
710 |
tcgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
||||||||| ||||||| ||| || |||| ||||| |||||||||||||||| | |||||||||||| |
|
|
T |
21010858 |
tcgagtttaacgagttttacacgtattaactcggttaaactcgtcaaacattttgatttcaccaaaa |
21010924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 643 - 761
Target Start/End: Complemental strand, 12029156 - 12029043
Alignment:
Q |
643 |
aaagaattgggttttgcaagaaaatgggcccaaaataaatgaaatgttttatttaacggaaattcggtcgagtttac-cgagtttaacatgtgttaagtc |
741 |
Q |
|
|
||||||||| |||||| |||||||||| |||||| |||||||| || |||| ||| |||||||||||||| ||||||||| | ||||||| | |
|
|
T |
12029156 |
aaagaattgagttttgaaagaaaatggatccaaaa------aaatgtttctttaaacgtaaactcggtcgagtttacacgagtttaatacgtgttaacta |
12029063 |
T |
 |
Q |
742 |
ggtcaaactcgtcaaacatt |
761 |
Q |
|
|
||||||||||||||||||| |
|
|
T |
12029062 |
tgtcaaactcgtcaaacatt |
12029043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 750
Target Start/End: Original strand, 7835355 - 7835394
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaact |
750 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||||| |
|
|
T |
7835355 |
cgagtttaccgagtttaacacgtgttaactcggtcaaact |
7835394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 333 - 416
Target Start/End: Original strand, 21010384 - 21010469
Alignment:
Q |
333 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataa--agttatggtcaactta |
416 |
Q |
|
|
|||||||| |||||| ||| |||||||| |||||||||| |||||||||||| || |||| ||||| ||||||| |||||||| |
|
|
T |
21010384 |
gcaaatagatcaatagtgcaaaatatgacttaattataatgacaaagtatacataactaccataataaagagttatgttcaactta |
21010469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 46; Significance: 9e-17; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 13898594 - 13898529
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
13898594 |
cgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaa |
13898529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 14039211 - 14039146
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
14039211 |
cgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaa |
14039146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 19948656 - 19948591
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
19948656 |
cgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaa |
19948591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 711 - 784
Target Start/End: Original strand, 38413437 - 38413511
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||| ||||||||||| ||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
38413437 |
cgagtttatcgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
38413511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 713 - 784
Target Start/End: Complemental strand, 3991889 - 3991817
Alignment:
Q |
713 |
agtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||| |||||||||||| |
|
|
T |
3991889 |
agtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgagttt |
3991817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 438
Target Start/End: Original strand, 37654850 - 37654955
Alignment:
Q |
335 |
aaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataaa--gttatggtcaacttaacaacaaaatataaaa |
432 |
Q |
|
|
|||||| |||||| | | |||||||| ||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||| ||||||| |||| |
|
|
T |
37654850 |
aaatagttcaatagtacaaaatatgacttaattataaatgcaaagtataccaaaccaccattataaaatattatgctcaacttaacatcaaaatacaaaa |
37654949 |
T |
 |
Q |
433 |
ttaact |
438 |
Q |
|
|
|||||| |
|
|
T |
37654950 |
ttaact |
37654955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 784
Target Start/End: Complemental strand, 41978955 - 41978881
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttca-ccaaaaccgagttt |
784 |
Q |
|
|
||||||||| |||||||||| ||||||| ||||||||||||||||||| ||| |||||| | |||||||||||| |
|
|
T |
41978955 |
cgagtttactgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaaccgagttt |
41978881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 333 - 439
Target Start/End: Complemental strand, 28546330 - 28546222
Alignment:
Q |
333 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataa--agttatggtcaacttaacaacaaaatataa |
430 |
Q |
|
|
||||||||||||||| || |||||||| |||||| |||| ||||| |||||| |||||| ||||| ||||||| |||||||| || ||||||| || |
|
|
T |
28546330 |
gcaaataggtcaataatgtaaaatatgacttaattctaaaggcaaaacatacataaccaccttaataaagagttatgttcaacttagcatcaaaatacaa |
28546231 |
T |
 |
Q |
431 |
aattaactt |
439 |
Q |
|
|
||||||||| |
|
|
T |
28546230 |
aattaactt |
28546222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 337 - 439
Target Start/End: Original strand, 37810365 - 37810469
Alignment:
Q |
337 |
ataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataaag--ttatggtcaacttaacaacaaaatataaaatt |
434 |
Q |
|
|
|||||||||||||| |||||||| ||||||||||| ||| |||||||| ||| || ||||||| ||| | ||||||||||| ||||||| |||||| |
|
|
T |
37810365 |
ataggtcaatattgtaaaatatgacttaattataaagacaacgtatacataacccccgtaataaagaattacgttcaacttaacatcaaaatacaaaatt |
37810464 |
T |
 |
Q |
435 |
aactt |
439 |
Q |
|
|
||||| |
|
|
T |
37810465 |
aactt |
37810469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 43318744 - 43318809
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| |||||| ||||||||||||||||||| ||| |||| ||||||| |
|
|
T |
43318744 |
cgagtttaccgagtttaacacatgttaactcggtcaaactcgtcaaactttccgattttaccaaaa |
43318809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 784
Target Start/End: Complemental strand, 33262968 - 33262897
Alignment:
Q |
714 |
gtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||||||| || ||||||| || |||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
33262968 |
gtttaccgagtttaccacgtgttaactcagtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
33262897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 670 - 784
Target Start/End: Complemental strand, 24026007 - 24025892
Alignment:
Q |
670 |
gcccaaaataaatgaaatgttttatttaacggaaattcggtcgagtttac-cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaattt |
768 |
Q |
|
|
|||||||||||| ||| |||||| || || | ||| || |||||||| || ||||||||||| ||||||| || ||| || |||||||||||||| |||| |
|
|
T |
24026007 |
gcccaaaataaaagaagtgtttt-ttaaatgtaaactcagtcgagttcacacgagtttaacacgtgttaactcagtccaattcgtcaaacattctgattt |
24025909 |
T |
 |
Q |
769 |
cacc-aaaaccgagttt |
784 |
Q |
|
|
||| |||||||||||| |
|
|
T |
24025908 |
taccaaaaaccgagttt |
24025892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 776
Target Start/End: Original strand, 37810867 - 37810931
Alignment:
Q |
712 |
gagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
||||||| |||||||||| |||||| |||||||||||| ||||||||| | |||||||||||| |
|
|
T |
37810867 |
gagtttattgagtttaacacgtgttagatcggtcaaactcatcaaacattatgatttcaccaaaa |
37810931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 784
Target Start/End: Original strand, 45161126 - 45161190
Alignment:
Q |
721 |
gagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||| ||||||| |||||| |||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
45161126 |
gagtttaacacgtgttaactcggtcgaactcgtcaaactttccgatttcaccaaaaaccgagttt |
45161190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 681
Target Start/End: Complemental strand, 28546046 - 28545913
Alignment:
Q |
546 |
actcagagaagagaataacgttttagaatttcagaagaagtcaagt-aatgtgttattttaattgcaatgacaacgtttcactaccttggacttcaagaa |
644 |
Q |
|
|
||||||||||||||| ||||| | || ||||| |||||| |||| || ||||||| ||||||| || |||||||||||| ||||| || | || || |
|
|
T |
28546046 |
actcagagaagagaagaacgtgtcagtctttcaaaagaag-caagacaacgtgttatgttaattgtaaagacaacgtttcagtacctaggcttgaaaaaa |
28545948 |
T |
 |
Q |
645 |
agaattgggttttgcaagaaaatgggcccaaaataaa |
681 |
Q |
|
|
|||||||||| ||| |||||||||| |||||||||| |
|
|
T |
28545947 |
agaattgggtattgaaagaaaatgg--ccaaaataaa |
28545913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 732 - 784
Target Start/End: Original strand, 35404323 - 35404376
Alignment:
Q |
732 |
gtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
||||||| ||||||||||||||||||| ||| ||||| ||| |||||||||||| |
|
|
T |
35404323 |
gtgttaactcggtcaaactcgtcaaactttccaattttaccaaaaaccgagttt |
35404376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 773
Target Start/End: Original strand, 38295698 - 38295763
Alignment:
Q |
709 |
gtcgagtttac-cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacca |
773 |
Q |
|
|
||||||||||| |||||||| | ||||||| ||||||||||||||||||| |||| |||| |||| |
|
|
T |
38295698 |
gtcgagtttacacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttacca |
38295763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 45; Significance: 4e-16; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 712 - 776
Target Start/End: Original strand, 33177831 - 33177895
Alignment:
Q |
712 |
gagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
||||||||||||||||||| ||||||| || ||||||||||||||||||| ||||||||||||| |
|
|
T |
33177831 |
gagtttaccgagtttaacacgtgttaactcagtcaaactcgtcaaacatttcaatttcaccaaaa |
33177895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 439
Target Start/End: Original strand, 4870637 - 4870725
Alignment:
Q |
353 |
aaatatgatttaattataaatgcaaagtatacatgaccaccaaaataa--agttatggtcaacttaacaacaaaatataaaattaactt |
439 |
Q |
|
|
|||||||| |||||||||| |||||||||||| ||||||| ||||| ||| ||| |||| |||||| ||||||| ||||||||||| |
|
|
T |
4870637 |
aaatatgacataattataaagacaaagtatacataaccaccataataaagagtaatgttcaatttaacatcaaaatagaaaattaactt |
4870725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 718 - 768
Target Start/End: Original strand, 4871099 - 4871149
Alignment:
Q |
718 |
accgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaattt |
768 |
Q |
|
|
||||||||||||| |||||| ||||| ||||||||||||||| ||||||| |
|
|
T |
4871099 |
accgagtttaacacatgttaactcggttaaactcgtcaaacatactaattt |
4871149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 33177340 - 33177445
Alignment:
Q |
333 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataaagttatggtcaacttaacaacaaaatataaaa |
432 |
Q |
|
|
|||||||||||||| | | ||||| || ||||||||||| |||| ||||||| || |||| || | ||||||| |||||||| || ||||||| |||| |
|
|
T |
33177340 |
gcaaataggtcaatgatacaaaataagacttaattataaagacaaaatatacataactaccataa-agagttatgttcaacttagcatcaaaatacaaaa |
33177438 |
T |
 |
Q |
433 |
ttaactt |
439 |
Q |
|
|
||||||| |
|
|
T |
33177439 |
ttaactt |
33177445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 45; Significance: 4e-16; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 724 - 776
Target Start/End: Complemental strand, 6268606 - 6268554
Alignment:
Q |
724 |
tttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
6268606 |
tttaacacgtgttaactcggtcaaactcgtcaaacattctaatttcaccaaaa |
6268554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 713 - 784
Target Start/End: Complemental strand, 19594326 - 19594254
Alignment:
Q |
713 |
agtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
19594326 |
agtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
19594254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 1253984 - 1254089
Alignment:
Q |
336 |
aataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataa--agttatggtcaacttaacaacaaaatataaaat |
433 |
Q |
|
|
|||||||||||| ||| |||||||| ||||||||||| |||||||||||| ||||||| | ||| ||||||| |||||||| || |||||||||||| |
|
|
T |
1253984 |
aataggtcaatagtgcaaaatatgacttaattataaagacaaagtatacataaccaccatattaaagagttatgttcaacttagcacaaaaatataaaat |
1254083 |
T |
 |
Q |
434 |
taactt |
439 |
Q |
|
|
||||| |
|
|
T |
1254084 |
gaactt |
1254089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 14732277 - 14732342
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| ||||| | ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
14732277 |
cgagtttaccgagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaa |
14732342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 34656723 - 34656658
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||| |
|
|
T |
34656723 |
cgagtttaccgagtttaacacgtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaa |
34656658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 720 - 784
Target Start/End: Complemental strand, 21024175 - 21024110
Alignment:
Q |
720 |
cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
||||||||||| ||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
21024175 |
cgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
21024110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 37391899 - 37391955
Alignment:
Q |
204 |
caactcgaaagtttacctcgactcattttatttatctacactcgaatcgtgaactcg |
260 |
Q |
|
|
|||||||| |||||||||| ||||||||||||||| || ||||||||||| |||||| |
|
|
T |
37391899 |
caactcgagagtttacctcaactcattttatttatgtaaactcgaatcgtaaactcg |
37391955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 439
Target Start/End: Complemental strand, 6269076 - 6268969
Alignment:
Q |
333 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataa--agttatggtcaacttaacaacaaaatataa |
430 |
Q |
|
|
||||||||||||||| ||| |||||||| ||||||||||| ||| |||||| | |||| || ||||| |||||| |||||||| || ||||||| || |
|
|
T |
6269076 |
gcaaataggtcaatagtgcaaaatatgacttaattataaagacaatgtatac-taaccatcataataaatagttattttcaacttagcatcaaaatacaa |
6268978 |
T |
 |
Q |
431 |
aattaactt |
439 |
Q |
|
|
||||||||| |
|
|
T |
6268977 |
aattaactt |
6268969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 719 - 776
Target Start/End: Complemental strand, 35313667 - 35313610
Alignment:
Q |
719 |
ccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||| ||||||| |||||||||||| |||||| ||| |||||||||||| |
|
|
T |
35313667 |
ccgagtttaacacgtgttaactcggtcaaactcatcaaactttccgatttcaccaaaa |
35313610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 719 - 776
Target Start/End: Complemental strand, 38910591 - 38910534
Alignment:
Q |
719 |
ccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||| ||||||| |||||||| |||||||||| ||| |||||||||||| |
|
|
T |
38910591 |
ccgagtttaacacgtgttaactcggtcaatctcgtcaaactttccgatttcaccaaaa |
38910534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 776
Target Start/End: Original strand, 1254440 - 1254515
Alignment:
Q |
702 |
aaattcggtcgagtttaccga-gtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||| | |||||| | |||||||| ||||||| |||||||||||| ||||||| || |||||||||||| |
|
|
T |
1254440 |
aaattcggtcaaatttacctaagtttaacacgtgttaactcggtcaaactcatcaaacagtccgatttcaccaaaa |
1254515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 711 - 778
Target Start/End: Complemental strand, 29690749 - 29690682
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaacc |
778 |
Q |
|
|
|||||||||| ||||||||| ||||||| |||||||||||||||| ||||||| ||||||| |||||| |
|
|
T |
29690749 |
cgagtttaccaagtttaacacgtgttaactcggtcaaactcgtcatacattctgatttcacaaaaacc |
29690682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 9818547 - 9818612
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| ||||| | ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
9818547 |
cgagtttaccgagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaa |
9818612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 49293921 - 49293856
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||| ||||||| ||||||| ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
49293921 |
cgagtttaccgaatttaacacgtgttaattcggtcaaactcgtcaaactttccgatttcaccaaaa |
49293856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 720 - 776
Target Start/End: Complemental strand, 37832681 - 37832625
Alignment:
Q |
720 |
cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||| |
|
|
T |
37832681 |
cgagtttaacacgtgttaactcggtcaaactcgtcaaactttctgatttcaccaaaa |
37832625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 707 - 761
Target Start/End: Original strand, 30238473 - 30238528
Alignment:
Q |
707 |
cggtcgagtttac-cgagtttaacatgtgttaagtcggtcaaactcgtcaaacatt |
761 |
Q |
|
|
||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
T |
30238473 |
cggtcgagtttactcgagtttaacatgtgttaattcggtcaaactcatcaaacatt |
30238528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 757
Target Start/End: Original strand, 47467394 - 47467440
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaa |
757 |
Q |
|
|
|||||||||| ||||||||| ||||||| |||||||||||||||||| |
|
|
T |
47467394 |
cgagtttaccaagtttaacacgtgttaactcggtcaaactcgtcaaa |
47467440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 40064396 - 40064331
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||||| ||||||| | ||||||| ||||||||| || |||||||||||| |
|
|
T |
40064396 |
cgagtttaccgagtttaacacgtgttaacttggtcaaattcgtcaaacttttcgatttcaccaaaa |
40064331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 773
Target Start/End: Complemental strand, 33693380 - 33693312
Alignment:
Q |
706 |
tcggtcgagtttac-cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacca |
773 |
Q |
|
|
|||||||||||||| |||||||| | ||||||| ||||||||||||||||||| |||| |||| |||| |
|
|
T |
33693380 |
tcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttacca |
33693312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 706 - 768
Target Start/End: Original strand, 19386869 - 19386930
Alignment:
Q |
706 |
tcggtcgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaattt |
768 |
Q |
|
|
|||||||||||||| ||||||||| ||||||| |||||||||||| ||| |||||| ||||| |
|
|
T |
19386869 |
tcggtcgagtttacgaagtttaacacgtgttaactcggtcaaactc-tcagacattccaattt |
19386930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 43173676 - 43173614
Alignment:
Q |
200 |
tttgcaactcgaaagtttacctcgactcattttatttatctacactcgaatcgtgaactcgta |
262 |
Q |
|
|
|||||||||||| |||||||||| |||| ||||||||| || |||||| ||| ||||||||| |
|
|
T |
43173676 |
tttgcaactcgagagtttacctcaactcgttttatttaggtaaactcgactcgagaactcgta |
43173614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 681
Target Start/End: Original strand, 2118337 - 2118390
Alignment:
Q |
628 |
accttggacttcaagaaagaattgggttttgcaagaaaatgggcccaaaataaa |
681 |
Q |
|
|
||||||||||| || |||||||||||||||| |||||||| ||||||||||| |
|
|
T |
2118337 |
accttggacttgaaaaaagaattgggttttgaaagaaaataaacccaaaataaa |
2118390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 9030557 - 9030626
Alignment:
Q |
333 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataaag |
402 |
Q |
|
|
||||||| ||||||| | | |||||||| ||||||| ||| |||||||||||| ||||||| ||||||| |
|
|
T |
9030557 |
gcaaatatgtcaataattcaaaatatgacttaattacaaagacaaagtatacataaccaccataataaag |
9030626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 719 - 776
Target Start/End: Complemental strand, 27261503 - 27261446
Alignment:
Q |
719 |
ccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||| ||||||| || |||||| ||||||||| ||| |||||||||||| |
|
|
T |
27261503 |
ccgagtttaacacgtgttaactcagtcaaattcgtcaaactttccgatttcaccaaaa |
27261446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 711 - 784
Target Start/End: Complemental strand, 54561337 - 54561263
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||||||||||||| ||||||| |||||||||| |||||||| ||| |||||||| |||||||||||| |
|
|
T |
54561337 |
cgagtttaccgagtttaacacgtgttaactcggtcaaacacgtcaaactttccgatttcaccaaaaaccgagttt |
54561263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 712 - 776
Target Start/End: Complemental strand, 26448748 - 26448684
Alignment:
Q |
712 |
gagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
26448748 |
gagtttaccgagtttaacgcgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaa |
26448684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 784
Target Start/End: Complemental strand, 51967395 - 51967321
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||||| ||||||| ||||||| ||||||||||||||||||| || |||||||| |||||||||||| |
|
|
T |
51967395 |
cgagtttaccgaatttaacacgtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgagttt |
51967321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 784
Target Start/End: Complemental strand, 9972881 - 9972817
Alignment:
Q |
721 |
gagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||| ||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
9972881 |
gagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
9972817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 711 - 784
Target Start/End: Original strand, 8563342 - 8563417
Alignment:
Q |
711 |
cgagtttac-cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttca-ccaaaaccgagttt |
784 |
Q |
|
|
||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||| |||||| | |||||||||||| |
|
|
T |
8563342 |
cgagtttacacgagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaaccgagttt |
8563417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 706 - 784
Target Start/End: Original strand, 29966374 - 29966453
Alignment:
Q |
706 |
tcggtcgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||| |||||||||||||||||||| |||||| ||||||||||||||| ||| || |||||||| |||||||||||| |
|
|
T |
29966374 |
tcggacgagtttaccgagtttaacacatgttaactcggtcaaactcgtcgaacttttcgatttcaccaaaaaccgagttt |
29966453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 719 - 776
Target Start/End: Original strand, 6487311 - 6487368
Alignment:
Q |
719 |
ccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||| ||||| | ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
6487311 |
ccgagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaa |
6487368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 23170716 - 23170781
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||| ||||||||||| |||||| ||||||||||||||||||| || |||||||||||| |
|
|
T |
23170716 |
cgagtttatcgagtttaacacatgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaa |
23170781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 40317131 - 40317238
Alignment:
Q |
333 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataa--agttatggtcaacttaacaacaaaatataa |
430 |
Q |
|
|
||||||||||||||| ||| |||||| | ||||||||||| ||||| |||||| ||||| | ||||| ||||||| |||||||| | ||||||| || |
|
|
T |
40317131 |
gcaaataggtcaatagtgcaaaatataacttaattataaa-acaaagcatacataaccactataataaatagttatgttcaacttagaatcaaaatacaa |
40317229 |
T |
 |
Q |
431 |
aattaactt |
439 |
Q |
|
|
||||||||| |
|
|
T |
40317230 |
aattaactt |
40317238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 40327205 - 40327312
Alignment:
Q |
333 |
gcaaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatacatgaccaccaaaataa--agttatggtcaacttaacaacaaaatataa |
430 |
Q |
|
|
||||||||||||||| ||| |||||| | ||||||||||| ||||| |||||| ||||| | ||||| ||||||| |||||||| | ||||||| || |
|
|
T |
40327205 |
gcaaataggtcaatagtgcaaaatataacttaattataaa-acaaagcatacataaccactataataaatagttatgttcaacttagaatcaaaatacaa |
40327303 |
T |
 |
Q |
431 |
aattaactt |
439 |
Q |
|
|
||||||||| |
|
|
T |
40327304 |
aattaactt |
40327312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 773
Target Start/End: Complemental strand, 50517317 - 50517249
Alignment:
Q |
706 |
tcggtcgagtttac-cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacca |
773 |
Q |
|
|
|||||||||||||| |||||||| | ||||||| ||||||||||||||||||| ||| ||||| |||| |
|
|
T |
50517317 |
tcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttccaattttacca |
50517249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 750
Target Start/End: Original strand, 41470320 - 41470359
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaact |
750 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||||| |
|
|
T |
41470320 |
cgagtttaccgagtttaacacgtgttaactcggtcaaact |
41470359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 715 - 777
Target Start/End: Original strand, 21306294 - 21306356
Alignment:
Q |
715 |
tttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaac |
777 |
Q |
|
|
|||||||||||||||| ||||||| ||| |||| ||||||||| |||| ||||||| ||||| |
|
|
T |
21306294 |
tttaccgagtttaacacgtgttaactcgaccaaattcgtcaaactttctgatttcactaaaac |
21306356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 719 - 784
Target Start/End: Complemental strand, 40162898 - 40162833
Alignment:
Q |
719 |
ccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
||||||||| || ||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
40162898 |
ccgagttta-cacgtgttaactcggtcaaactcgtcaaactttccgatttcaccgaaaaccgagttt |
40162833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 784
Target Start/End: Original strand, 26491117 - 26491182
Alignment:
Q |
720 |
cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacca-aaaccgagttt |
784 |
Q |
|
|
|||||||| || |||||| ||||||||||||||||||| |||| |||| |||| ||||||||||| |
|
|
T |
26491117 |
cgagtttaccaaatgttaactcggtcaaactcgtcaaaccttctgattttaccagaaaccgagttt |
26491182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 784
Target Start/End: Original strand, 56423961 - 56424034
Alignment:
Q |
712 |
gagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcac-caaaaccgagttt |
784 |
Q |
|
|
||||||||||||||||||| |||||| | |||||||||| |||||| ||| ||||||| |||||||||||| |
|
|
T |
56423961 |
gagtttaccgagtttaacacatgttaacttggtcaaactcatcaaactttccgatttcactaaaaaccgagttt |
56424034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 711 - 784
Target Start/End: Original strand, 33886842 - 33886916
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||||||||||||| ||||| | ||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
33886842 |
cgagtttaccgagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
33886916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 711 - 784
Target Start/End: Complemental strand, 33957408 - 33957334
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||||||||||||| ||||| | ||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
33957408 |
cgagtttaccgagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
33957334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 711 - 783
Target Start/End: Original strand, 42638016 - 42638088
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaaccgagtt |
783 |
Q |
|
|
|||||||||| | || |||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||| |
|
|
T |
42638016 |
cgagtttaccaaattaaacacatgttaagtcggtcaaactcatcaaacattctgatttcacaaaaaccgagtt |
42638088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 784
Target Start/End: Original strand, 34751554 - 34751628
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||||| | ||||| ||| |||||||| |||||||||||| |
|
|
T |
34751554 |
cgagtttaccgagtttaacacgtgttaactcggtcaaacttggcaaactttccgatttcaccaaaaaccgagttt |
34751628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 34019258 - 34019193
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||||||| ||||||| ||||||| |||||||| |||||||||| ||| |||||||||||| |
|
|
T |
34019258 |
cgagtttaccgaatttaacacgtgttaactcggtcaacctcgtcaaactttccgatttcaccaaaa |
34019193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 784
Target Start/End: Complemental strand, 1108491 - 1108417
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||| ||||||||||| | ||||| || |||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
1108491 |
cgagtttatcgagtttaacacgcgttaactcagtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
1108417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 2292726 - 2292775
Alignment:
Q |
335 |
aaataggtcaatattgcgaaatatgatttaattataaatgcaaagtatac |
384 |
Q |
|
|
||||||||||||||||| |||||||| ||||||| ||||||||| ||||| |
|
|
T |
2292726 |
aaataggtcaatattgcaaaatatgacttaattacaaatgcaaactatac |
2292775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 784
Target Start/End: Complemental strand, 7798629 - 7798565
Alignment:
Q |
721 |
gagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacc-aaaaccgagttt |
784 |
Q |
|
|
|||||||||| ||||| | ||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
T |
7798629 |
gagtttaacacgtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagttt |
7798565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 706 - 784
Target Start/End: Original strand, 42304476 - 42304556
Alignment:
Q |
706 |
tcggtcgagtttac-cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcacca-aaaccgagttt |
784 |
Q |
|
|
|||||||||||||| |||||||| | ||||||| |||||||||||||| |||| ||| ||||| |||| ||||||||||| |
|
|
T |
42304476 |
tcggtcgagtttacacgagtttacctagtgttaactcggtcaaactcgttaaaccttccaattttaccagaaaccgagttt |
42304556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0421 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0421
Description:
Target: scaffold0421; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 1817 - 1752
Alignment:
Q |
711 |
cgagtttaccgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcaccaaaa |
776 |
Q |
|
|
|||||||| | ||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||| |
|
|
T |
1817 |
cgagtttaacaagtttaacacgtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaa |
1752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0246 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0246
Description:
Target: scaffold0246; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 784
Target Start/End: Complemental strand, 1486 - 1411
Alignment:
Q |
711 |
cgagtttac-cgagtttaacatgtgttaagtcggtcaaactcgtcaaacattctaatttcac-caaaaccgagttt |
784 |
Q |
|
|
||||||||| ||||||||||| ||||||| ||||| ||||||||||||| ||| ||||||| |||||||||||| |
|
|
T |
1486 |
cgagtttacacgagtttaacacgtgttaactcggttaaactcgtcaaactttccgatttcactaaaaaccgagttt |
1411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 66 times since January 2019
Visitors: 4369