View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0680_low_13 (Length: 309)

Name: NF0680_low_13
Description: NF0680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0680_low_13
NF0680_low_13
[»] chr7 (1 HSPs)
chr7 (29-299)||(35275651-35275921)


Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 29 - 299
Target Start/End: Complemental strand, 35275921 - 35275651
Alignment:
Q  29 aataagaagcacacagaatgtttacaaactaacagtgagtaaggcaatgagatttaaaatggcaacactttaaaacagaaattccctcatcaaggatata 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35275921 aataagaagcacacagaatgtttacaaactaacagtgagtaaggcaatgagatttaaaatggcaacactttaaaacagaaattccctcatcaaggatata 35275822  T
Q  129 aaccaagagcaaaatctacatagaactctcactgttggtgtcttaatactgcatcattctccatcaccgaggatgaaaggaaattctcagacttcaaaga 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35275821 aaccaagagcaaaatctacatagaactctcactgttggtgtcttaatactgcatcattctccatcaccgaggatgaaaggaaattctcagacttcaaaga 35275722  T
Q  229 ccgcagattttccttgatccagttcccatatgggtttgataaggctactcgttttttaacctccatattct 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35275721 ccgcagattttccttgatccagttcccatatgggtttgataaggctactcgttttttaacctccatattct 35275651  T

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