View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0680_low_24 (Length: 231)
Name: NF0680_low_24
Description: NF0680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0680_low_24 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 231
Target Start/End: Original strand, 35275179 - 35275408
Alignment:
| Q |
2 |
catcataataattagtttaagagatgtaagagttttgtttgaaagcttataaatggaagttctatgagccgtcctaaaaaattacactcaagaacagctc |
101 |
Q |
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| T |
35275179 |
catcataataattagtttaagagatgtaagagttttgtttgaaagcttataaatggaagttctatgagccgtcctaaaaaattacactcaagaacagctc |
35275278 |
T |
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| Q |
102 |
atctgatgtcattttatctcacattggataacttatatatagttgactgataaataatttatatcatttgctagaaagtattaataatggggagcgtcag |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35275279 |
atctgatgtcattttatctcacattggataacttatatatagttgactgataaataatttatatcatttgctagaaagtattaataatggggagcgtcag |
35275378 |
T |
|
| Q |
202 |
tgtgcccctcagttcagtacattctaatgc |
231 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
35275379 |
tgtgcccctcagttcagtacattctaatgc |
35275408 |
T |
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