View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0681_high_1 (Length: 521)
Name: NF0681_high_1
Description: NF0681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0681_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 115 - 509
Target Start/End: Original strand, 7324804 - 7325198
Alignment:
| Q |
115 |
tgcataacccgaaagacatccttcgatatgcgaacacttcaaaagggtctgtaaaagttgtcttttcttgatctactagatcaacggcgatttgattcta |
214 |
Q |
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| T |
7324804 |
tgcataacccgaatgacatccttcgatatgcgaacacttcaaaagggtttgtaaaagttgtcttttcttgatcaactagatcaatgacgatttgattcta |
7324903 |
T |
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| Q |
215 |
tcctgggtatatatccatctaagccctttttggctagtctcttaagcatcttatccatgaatggtaatggaaagtggtcttccttattgcaaagttttac |
314 |
Q |
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| T |
7324904 |
tcctgagtatatatccatctaagccctttttggctagtctcttcagcatcttatccatgaatggtaatggaaagtggtcttccttattgcaaagttttac |
7325003 |
T |
|
| Q |
315 |
ctttggttatgcacatcctccatcctattactttacatgttgggatcaactcattcttgtcattcttgattacagtcatacgacataactcatttacttg |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7325004 |
ctttggttatgcacatcctccatcctattactttacatgttgggatcaactcattcttgtcattcttgattacagtcatacgacataactcatttacttg |
7325103 |
T |
|
| Q |
415 |
atagctagagttcccactttcttttctcatctatcaaggatcatttcttgactctggatgacttcctgttgaagtctggatattgcttccatatt |
509 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7325104 |
atagctagagttcccactttcttttctcttctatcaaggatcatttcttgactctggatgacttcctgttgaagtctggatattgcttccatatt |
7325198 |
T |
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