View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0681_low_1 (Length: 609)

Name: NF0681_low_1
Description: NF0681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0681_low_1
NF0681_low_1
[»] chr3 (72 HSPs)
chr3 (30-203)||(12761338-12761511)
chr3 (227-395)||(29067281-29067450)
chr3 (234-406)||(39427906-39428079)
chr3 (227-406)||(8156082-8156263)
chr3 (229-406)||(28745769-28745953)
chr3 (229-406)||(24620152-24620333)
chr3 (474-583)||(25870096-25870205)
chr3 (234-382)||(20756043-20756192)
chr3 (228-391)||(17064319-17064483)
chr3 (302-406)||(42696920-42697024)
chr3 (244-391)||(21963444-21963590)
chr3 (244-391)||(21985880-21986026)
chr3 (474-583)||(3449084-3449193)
chr3 (246-402)||(22137295-22137450)
chr3 (467-582)||(17064546-17064661)
chr3 (234-385)||(3449265-3449416)
chr3 (475-583)||(41671426-41671534)
chr3 (474-579)||(22137523-22137628)
chr3 (247-406)||(22494740-22494892)
chr3 (237-355)||(30727694-30727813)
chr3 (474-575)||(21963677-21963778)
chr3 (474-575)||(21986113-21986214)
chr3 (234-362)||(24649684-24649814)
chr3 (474-583)||(9152760-9152868)
chr3 (318-406)||(15515208-15515296)
chr3 (229-333)||(15806531-15806635)
chr3 (227-381)||(22356029-22356185)
chr3 (474-585)||(42697094-42697204)
chr3 (476-582)||(8155904-8156010)
chr3 (477-587)||(27090691-27090801)
chr3 (474-583)||(28746022-28746131)
chr3 (474-583)||(13286190-13286299)
chr3 (474-583)||(15515032-15515141)
chr3 (229-329)||(17796376-17796477)
chr3 (229-329)||(19104816-19104917)
chr3 (229-369)||(25870356-25870506)
chr3 (477-565)||(27676685-27676773)
chr3 (477-583)||(28136011-28136117)
chr3 (474-583)||(8592173-8592282)
chr3 (229-333)||(27676355-27676460)
chr3 (474-582)||(10872490-10872598)
chr3 (474-581)||(17796811-17796918)
chr3 (474-581)||(19105251-19105358)
chr3 (474-539)||(6136387-6136452)
chr3 (229-329)||(17796267-17796368)
chr3 (229-329)||(19104707-19104808)
chr3 (282-333)||(10872971-10873022)
chr3 (488-583)||(20766675-20766770)
chr3 (474-575)||(3041469-3041570)
chr3 (229-329)||(17796485-17796586)
chr3 (229-329)||(19104925-19105026)
chr3 (327-367)||(6136457-6136497)
chr3 (467-583)||(8560231-8560347)
chr3 (493-581)||(19348818-19348906)
chr3 (474-586)||(22971055-22971166)
chr3 (327-367)||(25870210-25870250)
chr3 (327-367)||(42697049-42697089)
chr3 (524-583)||(15806222-15806281)
chr3 (532-583)||(24649523-24649574)
chr3 (356-406)||(9152935-9152985)
chr3 (492-558)||(13006089-13006155)
chr3 (474-583)||(29067523-29067631)
chr3 (329-361)||(6861033-6861065)
chr3 (327-367)||(13286145-13286185)
chr3 (327-367)||(17064508-17064548)
chr3 (327-355)||(20756223-20756251)
chr3 (474-582)||(24619972-24620080)
chr3 (366-406)||(27676572-27676612)
chr3 (327-367)||(27676637-27676677)
chr3 (327-355)||(28745977-28746005)
chr3 (327-355)||(29067478-29067506)
chr3 (327-355)||(39428104-39428132)
[»] chr1 (50 HSPs)
chr1 (228-406)||(13100189-13100368)
chr1 (229-406)||(9954987-9955165)
chr1 (234-406)||(13276218-13276391)
chr1 (234-406)||(12513285-12513458)
chr1 (234-402)||(23528660-23528829)
chr1 (234-406)||(42180017-42180190)
chr1 (228-406)||(9352015-9352194)
chr1 (234-406)||(19009898-19010071)
chr1 (229-406)||(9327165-9327345)
chr1 (229-406)||(16125407-16125588)
chr1 (229-402)||(18304767-18304941)
chr1 (229-402)||(25146725-25146898)
chr1 (245-406)||(9128792-9128953)
chr1 (474-580)||(47786104-47786209)
chr1 (475-583)||(12513518-12513626)
chr1 (229-367)||(41032661-41032800)
chr1 (229-406)||(21846226-21846398)
chr1 (318-406)||(32881416-32881504)
chr1 (236-362)||(17055995-17056122)
chr1 (265-406)||(17869702-17869843)
chr1 (474-583)||(30619188-30619295)
chr1 (474-583)||(41032547-41032656)
chr1 (306-406)||(18228278-18228377)
chr1 (328-406)||(47785958-47786036)
chr1 (474-580)||(32881566-32881672)
chr1 (256-333)||(18337547-18337624)
chr1 (247-310)||(12800629-12800692)
chr1 (488-583)||(13100450-13100545)
chr1 (488-583)||(25146542-25146637)
chr1 (234-304)||(30619079-30619150)
chr1 (234-314)||(14074414-14074495)
chr1 (474-583)||(16434755-16434864)
chr1 (226-302)||(24117003-24117080)
chr1 (327-367)||(13100391-13100431)
chr1 (474-582)||(14074258-14074366)
chr1 (488-567)||(19009738-19009817)
chr1 (493-583)||(9351837-9351927)
chr1 (474-583)||(17055694-17055802)
chr1 (469-580)||(17197306-17197417)
chr1 (488-583)||(17869524-17869619)
chr1 (474-581)||(21846050-21846157)
chr1 (530-588)||(9954765-9954823)
chr1 (492-562)||(9954828-9954898)
chr1 (491-565)||(22789446-22789520)
chr1 (234-314)||(27917496-27917577)
chr1 (488-562)||(16125250-16125324)
chr1 (477-551)||(39845061-39845135)
chr1 (331-367)||(16125343-16125379)
chr1 (327-355)||(18304711-18304739)
chr1 (327-355)||(23528857-23528885)
[»] chr2 (44 HSPs)
chr2 (229-406)||(31237929-31238107)
chr2 (229-403)||(30432418-30432593)
chr2 (229-406)||(1404782-1404960)
chr2 (229-406)||(36429847-36430025)
chr2 (234-406)||(31578009-31578181)
chr2 (265-406)||(35565906-35566047)
chr2 (229-355)||(23863324-23863451)
chr2 (229-404)||(20063713-20063889)
chr2 (277-399)||(15588809-15588931)
chr2 (257-355)||(19491885-19491982)
chr2 (318-406)||(1690680-1690768)
chr2 (488-580)||(15588632-15588724)
chr2 (244-362)||(25539222-25539340)
chr2 (467-582)||(8428461-8428576)
chr2 (227-335)||(1690785-1690894)
chr2 (474-583)||(19245835-19245944)
chr2 (474-582)||(1405029-1405137)
chr2 (261-331)||(31023255-31023325)
chr2 (474-583)||(20063969-20064078)
chr2 (474-554)||(35565757-35565840)
chr2 (494-586)||(23863261-23863352)
chr2 (257-332)||(34841584-34841659)
chr2 (246-328)||(16766727-16766809)
chr2 (474-583)||(13502448-13502556)
chr2 (327-367)||(13502561-13502601)
chr2 (474-582)||(25538920-25539028)
chr2 (474-582)||(16767031-16767140)
chr2 (474-587)||(19262086-19262199)
chr2 (474-575)||(20034004-20034105)
chr2 (327-367)||(15588742-15588782)
chr2 (474-562)||(27523891-27523979)
chr2 (327-367)||(35565845-35565885)
chr2 (257-332)||(5395674-5395749)
chr2 (328-367)||(27406993-27407032)
chr2 (474-583)||(974584-974694)
chr2 (492-578)||(19492132-19492218)
chr2 (479-552)||(27407042-27407116)
chr2 (523-583)||(1690509-1690570)
chr2 (239-272)||(29660903-29660936)
chr2 (374-406)||(5395475-5395507)
chr2 (243-331)||(17995069-17995157)
chr2 (229-308)||(19245152-19245232)
chr2 (478-578)||(31062311-31062411)
chr2 (329-361)||(34841784-34841816)
[»] chr8 (52 HSPs)
chr8 (229-406)||(31424162-31424340)
chr8 (244-406)||(22910154-22910316)
chr8 (229-406)||(11879599-11879777)
chr8 (229-406)||(11897015-11897193)
chr8 (244-406)||(15294685-15294847)
chr8 (244-406)||(15475054-15475216)
chr8 (249-406)||(29384269-29384425)
chr8 (228-406)||(5922047-5922226)
chr8 (276-406)||(19704407-19704537)
chr8 (234-406)||(45403033-45403206)
chr8 (278-406)||(23142224-23142352)
chr8 (233-406)||(3094195-3094379)
chr8 (276-406)||(6810869-6810998)
chr8 (248-406)||(32424354-32424509)
chr8 (234-380)||(17646997-17647144)
chr8 (282-404)||(27836418-27836540)
chr8 (474-583)||(29384086-29384195)
chr8 (277-406)||(7489235-7489368)
chr8 (318-402)||(9212211-9212295)
chr8 (474-582)||(17647243-17647351)
chr8 (474-583)||(15231867-15231976)
chr8 (485-582)||(31424424-31424518)
chr8 (476-581)||(3094020-3094125)
chr8 (474-551)||(6811065-6811142)
chr8 (474-583)||(22909978-22910086)
chr8 (244-406)||(6292294-6292456)
chr8 (467-579)||(24056348-24056460)
chr8 (517-582)||(9212141-9212206)
chr8 (473-565)||(17566343-17566435)
chr8 (474-582)||(24414062-24414170)
chr8 (492-583)||(11879864-11879955)
chr8 (492-583)||(11897280-11897371)
chr8 (516-573)||(6292193-6292250)
chr8 (229-304)||(477101-477177)
chr8 (228-331)||(15761466-15761570)
chr8 (327-367)||(29384200-29384240)
chr8 (474-578)||(45403275-45403379)
chr8 (488-571)||(19704243-19704326)
chr8 (246-308)||(24056618-24056680)
chr8 (489-562)||(2040380-2040453)
chr8 (322-367)||(15294865-15294910)
chr8 (322-367)||(15475234-15475279)
chr8 (474-583)||(15761132-15761241)
chr8 (474-575)||(16752269-16752370)
chr8 (279-355)||(15231774-15231850)
chr8 (327-367)||(17647198-17647238)
chr8 (322-362)||(19704350-19704390)
chr8 (474-539)||(7262008-7262073)
chr8 (327-367)||(6811021-6811060)
chr8 (327-355)||(15761258-15761286)
chr8 (331-367)||(23142379-23142415)
chr8 (474-578)||(26574896-26575000)
[»] chr7 (67 HSPs)
chr7 (229-406)||(24725429-24725607)
chr7 (247-406)||(27221436-27221595)
chr7 (247-406)||(14055269-14055428)
chr7 (247-406)||(14365297-14365456)
chr7 (234-406)||(24990023-24990196)
chr7 (228-402)||(26281266-26281440)
chr7 (234-406)||(5058533-5058706)
chr7 (234-406)||(44944797-44944974)
chr7 (234-406)||(8346484-8346658)
chr7 (249-406)||(4247376-4247533)
chr7 (219-406)||(8329996-8330185)
chr7 (219-397)||(8343761-8343940)
chr7 (234-406)||(5715294-5715466)
chr7 (229-382)||(9685220-9685374)
chr7 (276-406)||(17811394-17811524)
chr7 (244-399)||(11324994-11325148)
chr7 (229-367)||(39182259-39182397)
chr7 (229-382)||(7730319-7730472)
chr7 (249-387)||(27509914-27510052)
chr7 (299-406)||(20570837-20570944)
chr7 (234-391)||(22687631-22687789)
chr7 (234-355)||(11326390-11326512)
chr7 (474-583)||(39182402-39182511)
chr7 (474-582)||(14055503-14055610)
chr7 (474-582)||(14365531-14365638)
chr7 (244-353)||(8571258-8571367)
chr7 (474-582)||(22687042-22687150)
chr7 (284-367)||(1977707-1977790)
chr7 (234-351)||(21846433-21846550)
chr7 (474-581)||(4574976-4575083)
chr7 (488-566)||(1977808-1977886)
chr7 (485-583)||(11325235-11325333)
chr7 (504-584)||(10285676-10285756)
chr7 (467-582)||(26565323-26565438)
chr7 (474-580)||(8304332-8304438)
chr7 (294-406)||(6916847-6916956)
chr7 (246-406)||(26617428-26617588)
chr7 (474-573)||(8329763-8329862)
chr7 (474-564)||(8343595-8343685)
chr7 (477-554)||(7730162-7730239)
chr7 (474-587)||(8346236-8346349)
chr7 (474-554)||(21846250-21846330)
chr7 (229-314)||(8630002-8630088)
chr7 (474-527)||(8329874-8329927)
chr7 (474-579)||(17741890-17741997)
chr7 (474-582)||(17811594-17811702)
chr7 (491-582)||(24989549-24989640)
chr7 (322-367)||(4247552-4247597)
chr7 (474-527)||(8346361-8346414)
chr7 (474-583)||(26617251-26617360)
chr7 (474-554)||(30294492-30294571)
chr7 (490-557)||(27221676-27221743)
chr7 (474-583)||(4247602-4247711)
chr7 (478-582)||(5058778-5058882)
chr7 (504-583)||(8253958-8254037)
chr7 (474-556)||(3696684-3696766)
chr7 (372-406)||(21846398-21846432)
chr7 (489-583)||(25842505-25842599)
chr7 (474-527)||(21157523-21157576)
chr7 (327-367)||(7730247-7730287)
chr7 (327-367)||(8329867-8329907)
chr7 (327-367)||(8329932-8329972)
chr7 (327-355)||(17811549-17811577)
chr7 (327-367)||(21846335-21846375)
chr7 (474-522)||(24725307-24725355)
chr7 (327-355)||(24725372-24725400)
chr7 (327-355)||(24989673-24989701)
[»] chr6 (61 HSPs)
chr6 (244-406)||(23897826-23897988)
chr6 (229-406)||(30912364-30912542)
chr6 (244-391)||(17250072-17250219)
chr6 (234-406)||(15528062-15528235)
chr6 (234-406)||(26053248-26053421)
chr6 (234-406)||(26073301-26073474)
chr6 (229-406)||(7223518-7223689)
chr6 (229-406)||(17543692-17543870)
chr6 (276-406)||(21354787-21354917)
chr6 (234-401)||(7918338-7918506)
chr6 (244-372)||(27233263-27233391)
chr6 (276-400)||(22498843-22498967)
chr6 (228-406)||(19748331-19748510)
chr6 (234-388)||(2912218-2912372)
chr6 (288-406)||(17103254-17103372)
chr6 (229-404)||(11327525-11327701)
chr6 (229-354)||(6943464-6943590)
chr6 (228-393)||(10508989-10509154)
chr6 (485-583)||(23898067-23898165)
chr6 (478-579)||(23506092-23506193)
chr6 (477-582)||(30912181-30912286)
chr6 (474-572)||(2912046-2912144)
chr6 (474-583)||(7223761-7223870)
chr6 (235-314)||(18491081-18491161)
chr6 (243-306)||(3573984-3574047)
chr6 (488-579)||(27614434-27614525)
chr6 (474-527)||(4841659-4841712)
chr6 (228-308)||(5422798-5422879)
chr6 (474-583)||(11327336-11327445)
chr6 (474-583)||(19748579-19748688)
chr6 (474-583)||(22498214-22498323)
chr6 (480-558)||(31407561-31407639)
chr6 (474-583)||(17543504-17543613)
chr6 (507-559)||(10508829-10508881)
chr6 (255-314)||(18491005-18491064)
chr6 (491-562)||(31108418-31108489)
chr6 (351-406)||(27614594-27614651)
chr6 (474-582)||(3573674-3573783)
chr6 (266-331)||(4841946-4842011)
chr6 (474-539)||(20432411-20432476)
chr6 (467-583)||(7918124-7918240)
chr6 (474-562)||(15527905-15527993)
chr6 (327-366)||(4841718-4841757)
chr6 (363-405)||(7918301-7918343)
chr6 (481-583)||(21354928-21355030)
chr6 (327-368)||(2912148-2912189)
chr6 (322-355)||(17103391-17103424)
chr6 (474-583)||(17103441-17103550)
chr6 (255-308)||(18490935-18490988)
chr6 (474-579)||(26053074-26053179)
chr6 (474-579)||(26073127-26073232)
chr6 (327-355)||(7918250-7918278)
chr6 (327-367)||(10508905-10508945)
chr6 (327-355)||(17543630-17543658)
chr6 (327-355)||(19748534-19748562)
chr6 (327-355)||(22498340-22498368)
chr6 (327-367)||(23898012-23898052)
chr6 (327-355)||(26053196-26053224)
chr6 (327-355)||(26073249-26073277)
chr6 (327-367)||(30912294-30912334)
chr6 (329-361)||(33593057-33593089)
[»] chr5 (41 HSPs)
chr5 (228-406)||(21059108-21059286)
chr5 (229-406)||(18051485-18051660)
chr5 (229-406)||(19578941-19579119)
chr5 (234-406)||(43234872-43235045)
chr5 (243-406)||(18843729-18843892)
chr5 (234-406)||(23172380-23172557)
chr5 (278-406)||(19979648-19979776)
chr5 (247-406)||(41688617-41688775)
chr5 (234-391)||(38158221-38158379)
chr5 (228-395)||(22645681-22645850)
chr5 (244-406)||(27340142-27340300)
chr5 (234-354)||(20923722-20923843)
chr5 (278-406)||(20320992-20321119)
chr5 (467-585)||(24648248-24648368)
chr5 (474-582)||(41688441-41688549)
chr5 (474-562)||(19377849-19377937)
chr5 (518-582)||(19979858-19979922)
chr5 (234-303)||(19042444-19042514)
chr5 (490-584)||(41427681-41427775)
chr5 (489-582)||(27339962-27340055)
chr5 (474-582)||(43005634-43005742)
chr5 (474-581)||(18843961-18844068)
chr5 (493-583)||(18051307-18051397)
chr5 (328-370)||(19042406-19042448)
chr5 (474-535)||(21058978-21059040)
chr5 (474-520)||(38158101-38158147)
chr5 (478-527)||(17624851-17624900)
chr5 (230-302)||(24106641-24106714)
chr5 (474-583)||(43235114-43235223)
chr5 (474-582)||(15051872-15051980)
chr5 (327-367)||(21059045-21059085)
chr5 (327-367)||(27340075-27340115)
chr5 (516-579)||(30804216-30804279)
chr5 (234-295)||(20320928-20320990)
chr5 (477-522)||(15904976-15905021)
chr5 (373-406)||(26021464-26021497)
chr5 (327-355)||(18843916-18843944)
chr5 (327-355)||(19579144-19579172)
chr5 (327-355)||(20321144-20321172)
chr5 (474-582)||(20321189-20321297)
chr5 (515-579)||(29270310-29270374)
[»] chr4 (52 HSPs)
chr4 (229-406)||(5361915-5362093)
chr4 (245-406)||(9770128-9770289)
chr4 (235-406)||(8889233-8889405)
chr4 (267-406)||(9911363-9911502)
chr4 (229-406)||(13023566-13023747)
chr4 (229-406)||(36120823-36121001)
chr4 (244-406)||(10142914-10143076)
chr4 (234-406)||(17466083-17466256)
chr4 (234-406)||(5375668-5375841)
chr4 (229-382)||(13551598-13551752)
chr4 (244-406)||(23064913-23065077)
chr4 (271-406)||(37240300-37240434)
chr4 (474-583)||(6346729-6346838)
chr4 (234-354)||(8011220-8011341)
chr4 (474-584)||(18459404-18459514)
chr4 (474-583)||(8889463-8889571)
chr4 (474-582)||(37240485-37240593)
chr4 (474-567)||(5361755-5361848)
chr4 (234-333)||(7044731-7044831)
chr4 (486-585)||(7045202-7045301)
chr4 (474-572)||(5943044-5943142)
chr4 (467-583)||(7452745-7452860)
chr4 (488-583)||(9770372-9770467)
chr4 (229-308)||(6347114-6347194)
chr4 (244-333)||(7452435-7452523)
chr4 (474-583)||(10394856-10394965)
chr4 (234-332)||(4156767-4156866)
chr4 (474-575)||(4157273-4157377)
chr4 (474-575)||(4157560-4157664)
chr4 (474-580)||(10143146-10143250)
chr4 (229-314)||(24719516-24719602)
chr4 (244-333)||(18459733-18459822)
chr4 (478-582)||(17466329-17466433)
chr4 (529-583)||(24719869-24719923)
chr4 (488-583)||(5375925-5376020)
chr4 (474-577)||(9149502-9149605)
chr4 (232-333)||(7815559-7815661)
chr4 (327-364)||(4157053-4157090)
chr4 (474-539)||(8010954-8011019)
chr4 (474-522)||(11320974-11321022)
chr4 (477-573)||(13023807-13023903)
chr4 (503-579)||(46664152-46664228)
chr4 (328-367)||(6346843-6346882)
chr4 (474-581)||(23064737-23064844)
chr4 (333-367)||(24719782-24719816)
chr4 (467-508)||(5884129-5884170)
chr4 (474-583)||(55476234-55476343)
chr4 (327-367)||(7044964-7045004)
chr4 (327-367)||(8011024-8011064)
chr4 (331-367)||(9911299-9911335)
chr4 (327-367)||(17466280-17466320)
chr4 (327-355)||(36121024-36121052)
[»] scaffold0186 (3 HSPs)
scaffold0186 (229-406)||(8442-8620)
scaffold0186 (474-583)||(8687-8796)
scaffold0186 (327-355)||(8642-8670)
[»] scaffold0417 (1 HSPs)
scaffold0417 (244-406)||(7407-7569)
[»] scaffold0042 (3 HSPs)
scaffold0042 (229-406)||(93657-93834)
scaffold0042 (474-578)||(93483-93588)
scaffold0042 (327-367)||(93593-93633)
[»] scaffold0510 (2 HSPs)
scaffold0510 (244-367)||(91-215)
scaffold0510 (485-554)||(7-76)
[»] scaffold0028 (1 HSPs)
scaffold0028 (474-582)||(145834-145942)
[»] scaffold0016 (3 HSPs)
scaffold0016 (474-586)||(56196-56308)
scaffold0016 (350-404)||(58736-58790)
scaffold0016 (327-355)||(56325-56353)
[»] scaffold0048 (3 HSPs)
scaffold0048 (243-307)||(48839-48903)
scaffold0048 (474-582)||(61089-61197)
scaffold0048 (474-522)||(48497-48545)
[»] scaffold0603 (3 HSPs)
scaffold0603 (474-575)||(8741-8842)
scaffold0603 (229-329)||(9049-9150)
scaffold0603 (327-355)||(8859-8887)
[»] scaffold0534 (1 HSPs)
scaffold0534 (473-565)||(915-1007)
[»] scaffold0036 (1 HSPs)
scaffold0036 (229-333)||(37191-37296)
[»] scaffold0115 (1 HSPs)
scaffold0115 (234-315)||(35102-35184)
[»] scaffold0150 (1 HSPs)
scaffold0150 (474-582)||(33184-33299)


Alignment Details
Target: chr3 (Bit Score: 166; Significance: 2e-88; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 30 - 203
Target Start/End: Original strand, 12761338 - 12761511
Alignment:
Q  30 ggaatgcttgatgattatggtgtttgtggaaataatttgaagtggattgttagaagcaaagagaagaattctgataaggttgtagaagaggtttttgatg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12761338 ggaatgcttgatgattatggtgtttgtggaaataatttgaagtggattgttagaagcaaagagaagaattctgataaggttgtggaagaggtttttgatg 12761437  T
Q  130 cagtggttgttgccactggtcattactgtcaaccaaaattgccaaccattaaaggtaacatgattttctatact 203  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12761438 cagtggttgttgccactggtcattactgtcaaccaaaattgccatccattaaaggtaacatgattttctatact 12761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 227 - 395
Target Start/End: Original strand, 29067281 - 29067450
Alignment:
Q  227 tccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaatagg 325  Q
    |||||| |||||||||||| |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||||     
T  29067281 tccattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 29067380  T
Q  326 caaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccat 395  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  29067381 caaaatccatcgattttgattgtgattttacgatttcttataaactaagtcatttatgactatataccat 29067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 39427906 - 39428079
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| || ||||||| |||||||  ||||||| ||||||||||||| |||||||||||||||| |||||||||| | ||||||| |||| ||    
T  39427906 ttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagacaaagtc 39428005  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  39428006 catcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatactacttataacatat 39428079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 227 - 406
Target Start/End: Complemental strand, 8156263 - 8156082
Alignment:
Q  227 tccattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaat-ag 324  Q
    |||||| |||||||||||| | |||||||||||||||  || ||||||| | ||| ||||||||||| ||||||||||||||||| ||| | ||||| ||    
T  8156263 tccattgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattag 8156164  T
Q  325 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
     |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  8156163 acaaaatccatcgattttgattgcgattttacgatttcttataaactaagttatttataactatataccatttataacatat 8156082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 28745769 - 28745953
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| || |||||| ||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||   ||||||| ||    
T  28745769 cattgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagaca 28745868  T
Q  328 aaatccatcgattttgattgcgattttaagatttc------ttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| ||||||||||||||||||||||| ||||||      |||||||| ||||||||||||||||||||| |||||||||||||    
T  28745869 aaattcatcgattttgattgcgattttacgatttcttataattataaactaagtcatttatgactatatactatttataacatat 28745953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 24620333 - 24620152
Alignment:
Q  229 cattattgtcaaaat-ccgacttaaattctaaaatctaggatttt---acaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaatag 324  Q
    |||| |||||||||| ||||||||||| ||||||| || ||||||   || ||||||||||||||||||||||||||| || ||||||||   |||||||    
T  24620333 cattgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaatag 24620234  T
Q  325 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||| |||||||||| ||||| |||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  24620233 gcaaaattcatcgattttaattgcaattttacgatttcttataaactaagtcatttatgattatataccatttataaaatat 24620152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 25870205 - 25870096
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  25870205 ttctacaaacttagttgagtaaaatcctttgattttggttgcgattttacgattgtcgattttactcttctctttcgacctaaagcaaaatctcgatttt 25870106  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  25870105 gacaaccttg 25870096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 234 - 382
Target Start/End: Original strand, 20756043 - 20756192
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| |||||||||| ||||||  |||||||| | | ||||||||||||||| |||||||||||||||||||||   |||||||||||||||    
T  20756043 ttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaaaatc 20756142  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttat 382  Q
     ||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  20756143 aatcgattttgattgcaattttacgatttcttataaactaagtcatttat 20756192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 228 - 391
Target Start/End: Original strand, 17064319 - 17064483
Alignment:
Q  228 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    |||||| ||||||||||| |||||||||  ||||||  |||||||| | | | | ||||||||||||||||| ||| ||||||||||| | ||||||| |    
T  17064319 ccattaatgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagac 17064418  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatata 391  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  17064419 aaaattcatcgatttttattgcgattttacgatttcttataaactaagtcatttatgactatata 17064483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 42696920 - 42697024
Alignment:
Q  302 tccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataa 401  Q
    |||||||||||||   |||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataa 42697019  T
Q  402 catat 406  Q
    |||||    
T  42697020 catat 42697024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 244 - 391
Target Start/End: Original strand, 21963444 - 21963590
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||| |||||||  | |||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  21963444 ccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcgattttg 21963543  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatata 391  Q
    || ||||||||  ||||||||||  || ||||||||||||||||||||    
T  21963544 atagcgatttt-cgatttcttatttactaagtcatttatgactatata 21963590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 244 - 391
Target Start/End: Original strand, 21985880 - 21986026
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||| |||||||  | |||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  21985880 ccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcgattttg 21985979  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatata 391  Q
    || ||||||||  ||||||||||  || ||||||||||||||||||||    
T  21985980 atagcgatttt-cgatttcttatttactaagtcatttatgactatata 21986026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 3449193 - 3449084
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  3449193 ttctacaaaagtagttgaataaaatcattcgattttggttgcgattttacgattgtcgattttgctcttctctttcaacctaaagcaaaatcccaatttt 3449094  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  3449093 gacaaccttg 3449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 246 - 402
Target Start/End: Original strand, 22137295 - 22137450
Alignment:
Q  246 gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgat 345  Q
    ||||||||| |||||||  | ||| |||| |||||||||||||| |||| ||||||||||||||| ||| | |||||| |||||||||||||||||| ||    
T  22137295 gacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaaaatccatcgattttaat 22137394  T
Q  346 tgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 402  Q
    |||||||||  ||||||||||  || ||||||||||||||||||||| |||||||||    
T  22137395 tgcgatttt-cgatttcttatttactaagtcatttatgactatatactatttataac 22137450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 467 - 582
Target Start/End: Original strand, 17064546 - 17064661
Alignment:
Q  467 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 566  Q
    |||||| |||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||||||| |||| ||||||||||| ||| ||||||     
T  17064546 atattgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgattttgatcttttctttcgacctgaagcaaaatcc 17064645  T
Q  567 caattttgacaacctt 582  Q
    ||||||||||||||||    
T  17064646 caattttgacaacctt 17064661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 234 - 385
Target Start/End: Complemental strand, 3449416 - 3449265
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| ||||||||| |||||||  |||||||| | |||||||| |||||||||| || ||||| |||||||||| | |||||||||||||||    
T  3449416 ttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaaatc 3449318  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgac 385  Q
    ||| |||||| |||||||||||| |||||||||||||  ||||||||| ||||    
T  3449317 catagatttttattgcgattttacgatttcttataaagtaagtcatttgtgac 3449265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 475 - 583
Target Start/End: Original strand, 41671426 - 41671534
Alignment:
Q  475 tctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttg 574  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||||||||| ||| |||||| | ||||||    
T  41671426 tctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacaattatcgattttgctcttctctttcgacctgaagcaaaatcccgattttg 41671525  T
Q  575 acaaccttg 583  Q
    |||||||||    
T  41671526 acaaccttg 41671534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 474 - 579
Target Start/End: Original strand, 22137523 - 22137628
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||| ||  |||||||| |||||    
T  22137523 ttctacaaaagtagttgagtaaaattctttgattttggttgtgattttactattgctgattttgctcttctctttcgacctgaaacaaaatctcgatttt 22137622  T
Q  574 gacaac 579  Q
    ||||||    
T  22137623 gacaac 22137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 247 - 406
Target Start/End: Complemental strand, 22494892 - 22494740
Alignment:
Q  247 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 346  Q
    |||||||| |||||||||  |||||| | ||||| |||||||||||||||| |||| ||||||||||| | ||||||  |||||| ||||||||||||||    
T  22494892 acttaaatcctaaaatctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgatt 22494793  T
Q  347 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| |       |||||| |||||| ||||||||||||||||||||||||||||    
T  22494792 gcgattttacg-------ataaactaagtcagttatgactatataccatttataacatat 22494740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 237 - 355
Target Start/End: Complemental strand, 30727813 - 30727694
Alignment:
Q  237 tcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccat 335  Q
    ||||||||| |||||||||  |||||||  | ||||||| |||||||||||||||||||||||||||| |||||||||| | ||||||| |||||| |||    
T  30727813 tcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaaaattcat 30727714  T
Q  336 cgattttgattgcgatttta 355  Q
    ||||||||||||||||||||    
T  30727713 cgattttgattgcgatttta 30727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 474 - 575
Target Start/End: Original strand, 21963677 - 21963778
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    ||||| |||| || ||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||||| |||||    
T  21963677 ttctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgctcttctctttcgacctgaaacaaaatctcgatttt 21963776  T
Q  574 ga 575  Q
    ||    
T  21963777 ga 21963778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 474 - 575
Target Start/End: Original strand, 21986113 - 21986214
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    ||||| |||| || ||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||||| |||||    
T  21986113 ttctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgctcttctctttcgacctgaaacaaaatctcgatttt 21986212  T
Q  574 ga 575  Q
    ||    
T  21986213 ga 21986214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 234 - 362
Target Start/End: Complemental strand, 24649814 - 24649684
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaat-aggcaaaat 331  Q
    |||||||||||| |||||||||  ||||||||||||||||   |||| |||||||||||||||||||||||||||||||||| | ||||| | |||||||    
T  24649814 ttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaataaagcaaaat 24649715  T
Q  332 ccatcgattttgattgcgattttaagatttc 362  Q
     |||| ||||||| || ||||||| ||||||    
T  24649714 tcatcaattttgactgtgattttacgatttc 24649684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 9152868 - 9152760
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||||||| ||||| || ||||||||||  |||||||||||||| |||||| ||||||||||||||||| ||| ||||||   |||||    
T  9152868 ttctacaaaaatagttgagtcaaatctttcgattttggttacgattttacgattgttgattttactcttctctttcgacct-aagcaaaatcctgatttt 9152770  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  9152769 gacaaccttg 9152760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 318 - 406
Target Start/End: Complemental strand, 15515296 - 15515208
Alignment:
Q  318 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||| ||||| | |||||||| | | |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15515296 aaaataggaaaaattcgtcgattttaacttcgatttcacgatttcttataaactaagtcatttatgactatataccatttataacatat 15515208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 15806635 - 15806531
Alignment:
Q  229 cattattgtcaaaatccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaa 328  Q
    |||| ||||||||||||||||||||| ||| |||| || ||||| | ||||| ||||||||||| ||||||||||||||| ||||| | |||| ||||||    
T  15806635 cattgttgtcaaaatccgacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaacaggcaa 15806536  T
Q  329 aatcc 333  Q
    |||||    
T  15806535 aatcc 15806531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 381
Target Start/End: Complemental strand, 22356185 - 22356029
Alignment:
Q  227 tccattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttctt-caccttcaacgactcaaatccatagtagaatacaaaaatag 324  Q
    |||||| || ||||||| ||||||||||| |||||||  |||||||||  | ||| || || ||||||| | |  ||| ||||||||||| | ||||||     
T  22356185 tccattgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataa 22356086  T
Q  325 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcattta 381  Q
    |||||||||||  |||||||||||||||||| |||||||||||||| ||||||||||    
T  22356085 gcaaaatccatgaattttgattgcgattttacgatttcttataaactaagtcattta 22356029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 474 - 585
Target Start/End: Original strand, 42697094 - 42697204
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||||| ||||||||||  ||||| |||| |||||||| |||||||||||| |||||||| |||||||| ||| ||||||   |||||    
T  42697094 ttctacaaaagtagttgaataaaatccttcaattttagttgcgattttacaattgtcgatttt-ctcttctcattcgacctgaagcaaaatcctgatttt 42697192  T
Q  574 gacaaccttgtt 585  Q
    ||||||||||||    
T  42697193 gacaaccttgtt 42697204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 476 - 582
Target Start/End: Complemental strand, 8156010 - 8155904
Alignment:
Q  476 ctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttga 575  Q
    |||||||| |||||||||||||||||| ||| || |||| ||||||| ||||||| |||||||||||||||| | |||| ||| |||||   ||||||||    
T  8156010 ctacaaaagtagttgagtaaaatccttcgatcttagttgcgattttatgattgtccattttgctcttctcttaccacctgaagcaaaattctaattttga 8155911  T
Q  576 caacctt 582  Q
    |||||||    
T  8155910 caacctt 8155904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 477 - 587
Target Start/End: Original strand, 27090691 - 27090801
Alignment:
Q  477 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgac 576  Q
    |||||||||  ||||||||||||||| ||||||  ||| ||| ||||||||  | ||||| || ||| ||||||||||||||||||||||| |||| |||    
T  27090691 tacaaaattccttgagtaaaatccttcgatttttattgcgatcttacgatttgcaatttttctattccctttcgacctaaagtaaaatctcgatttcgac 27090790  T
Q  577 aaccttgttct 587  Q
    |||||||||||    
T  27090791 aaccttgttct 27090801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 28746022 - 28746131
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||| ||| ||||||| ||| |||||||||| |  |||||||||| || ||||||||||| ||||||| || |||||||    
T  28746022 ttctacaaaagttcttgagtaaaattcttcgattttgattgcgattttacgagtcccgattttgctattttctttcgacctgaagtaaagtcccaatttt 28746121  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  28746122 gacaaccttg 28746131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 13286190 - 13286299
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||||||||||||| |||||||||| ||| |||||||||| | | |||||| |||||| ||| |||||| ||| |||||    |||||    
T  13286190 ttctacaaaagtagttgagtaaaatcttttgattttgattgcgattttacgagttttgatttttctcttcccttccgacctgaagcaaaattgtgatttt 13286289  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  13286290 gacaaccttg 13286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 15515141 - 15515032
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    ||||| |||| |||||||||||||| ||| |||||| |||  |||||||| ||||||||||||| || |||||||| |||| ||| |||||| | |||||    
T  15515141 ttctataaaagtagttgagtaaaatacttcgattttagttaagattttacaattgtcgattttggtcatctctttcaacctgaagcaaaatcccgatttt 15515042  T
Q  574 gacaaccttg 583  Q
     |||||||||    
T  15515041 aacaaccttg 15515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 17796376 - 17796477
Alignment:
Q  229 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||| ||||| |||| ||||||| |||||||| ||||| ||||| | ||||||| ||    
T  17796376 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagaca 17796475  T
Q  328 aa 329  Q
    ||    
T  17796476 aa 17796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 19104816 - 19104917
Alignment:
Q  229 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||| ||||| |||| ||||||| |||||||| ||||| ||||| | ||||||| ||    
T  19104816 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagaca 19104915  T
Q  328 aa 329  Q
    ||    
T  19104916 aa 19104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 229 - 369
Target Start/End: Complemental strand, 25870506 - 25870356
Alignment:
Q  229 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacga----ctcaaatccatagtagaatacaaaaata 323  Q
    |||| ||||||||||| |||||||||| |||||||| | ||||||   |||||||||| |||||||||    ||||||| | ||||||||    ||||||    
T  25870506 cattgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaata 25870407  T
Q  324 ggcaaaatccatcgattt-----tgattgcgattttaagatttcttataaa 369  Q
    ||||||||||||||||||     |||||||||||||| |||||||||||||    
T  25870406 ggcaaaatccatcgatttgattttgattgcgattttacgatttcttataaa 25870356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 477 - 565
Target Start/End: Original strand, 27676685 - 27676773
Alignment:
Q  477 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatc 565  Q
    ||||||| ||||||||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||| |||||||| | ||| ||||||    
T  27676685 tacaaaagtagttgagtaaaatctttcgattttgattgcgattttaagattttcgattttgctcttccctttcgacttgaagcaaaatc 27676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 477 - 583
Target Start/End: Original strand, 28136011 - 28136117
Alignment:
Q  477 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgac 576  Q
    ||||||| |||||||||||||||||| ||||||| | | |||||||||||| |||||||| |||| |  |||  || | ||||||||||  |||||||||    
T  28136011 tacaaaagtagttgagtaaaatccttcgattttgatagcgattttacgattctcgattttactctaccattttaacttgaagtaaaatcctaattttgac 28136110  T
Q  577 aaccttg 583  Q
    |||||||    
T  28136111 aaccttg 28136117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 8592282 - 8592173
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| | ||||||||||| ||  |||||||| | ||||||| || | ||||     
T  8592282 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctatttcctttcgacttgaagtaaagtcccgatttc 8592183  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  8592182 gacaaccttg 8592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 333
Target Start/End: Original strand, 27676355 - 27676460
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| |||||||||  ||||||  |||||||| | ||||| ||||||||| | ||||||||||||||| ||||| | |||||||| |    
T  27676355 cattgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggta 27676454  T
Q  328 aaatcc 333  Q
    ||||||    
T  27676455 aaatcc 27676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 10872598 - 10872490
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||| ||||| ||||| ||||||||||||  |||||| ||| ||||||| |||| | |||||| |||||| |||| ||||| ||||||||||   |||||    
T  10872598 ttcttcaaaagtagtttagtaaaatccttcaattttgattgcgattttatgatttttgatttttctcttcccttttgacctgaagtaaaatcctgatttt 10872499  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  10872498 gacaacctt 10872490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 581
Target Start/End: Original strand, 17796811 - 17796918
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||| ||| ||||||  |||  ||||||||||| |  ||||| || ||| |||||||||| ||  ||||||||||||||    
T  17796811 ttctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttttatttttcttttccctttcgacctgaatcaaaatctcaatttt 17796910  T
Q  574 gacaacct 581  Q
    || |||||    
T  17796911 gataacct 17796918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 581
Target Start/End: Original strand, 19105251 - 19105358
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||| ||| ||||||  |||  ||||||||||| |  ||||| || ||| |||||||||| ||  ||||||||||||||    
T  19105251 ttctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttttatttttcttttccctttcgacctgaatcaaaatctcaatttt 19105350  T
Q  574 gacaacct 581  Q
    || |||||    
T  19105351 gataacct 19105358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 539
Target Start/End: Complemental strand, 6136452 - 6136387
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgct 539  Q
    ||||| |||| ||||||||||||||| |||||||||| ||| |||||||||||| | |||||||||    
T  6136452 ttctataaaagtagttgagtaaaatcttttgattttgattgcgattttacgatttttgattttgct 6136387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 17796267 - 17796368
Alignment:
Q  229 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    ||||||||||||||| || ||||||||  ||||||||||||||||   ||||| |||||||||||| ||| |||| ||||| ||||| | ||||||| ||    
T  17796267 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagaca 17796366  T
Q  328 aa 329  Q
    ||    
T  17796367 aa 17796368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 19104707 - 19104808
Alignment:
Q  229 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    ||||||||||||||| || ||||||||  ||||||||||||||||   ||||| |||||||||||| ||| |||| ||||| ||||| | ||||||| ||    
T  19104707 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagaca 19104806  T
Q  328 aa 329  Q
    ||    
T  19104807 aa 19104808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 10873022 - 10872971
Alignment:
Q  282 ttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 333  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||||||||    
T  10873022 ttcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 20766770 - 20766675
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    |||||||||||  || ||||||| ||| |||||||||| | |||||||||||  ||||||||||  | ||||||| || | |||||||||||||||    
T  20766770 ttgagtaaaatttttcgattttgattgcgattttacgagtctcgattttgctactctctttcgagttgaagtaaagtcccgattttgacaaccttg 20766675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 575
Target Start/End: Original strand, 3041469 - 3041570
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  ||  ||||||| | |||||||||| | |||||    
T  3041469 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaaatcccgatttt 3041568  T
Q  574 ga 575  Q
    ||    
T  3041569 ga 3041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 17796485 - 17796586
Alignment:
Q  229 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| ||||||||||  ||| ||||||  |||||||||||||||| | ||||| |||||||||||| ||| |||| ||||| ||||| | ||||||| ||    
T  17796485 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagaca 17796584  T
Q  328 aa 329  Q
    ||    
T  17796585 aa 17796586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 19104925 - 19105026
Alignment:
Q  229 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| ||||||||||  ||| ||||||  |||||||||||||||| | ||||| |||||||||||| ||| |||| ||||| ||||| | ||||||| ||    
T  19104925 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagaca 19105024  T
Q  328 aa 329  Q
    ||    
T  19105025 aa 19105026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 6136497 - 6136457
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  6136497 aaaatccatcgattttgattgtgattttacgatttcttata 6136457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 583
Target Start/End: Complemental strand, 8560347 - 8560231
Alignment:
Q  467 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 566  Q
    |||||| ||||||||||    ||||||||||||||| ||||||| ||| ||||| |||| | |||||||||||  || |||| ||| | ||||||| ||     
T  8560347 atattgattctacaaaaaaccttgagtaaaatccttcgattttgattgcgatttcacgagtctcgattttgctactcccttttgacttgaagtaaagtcc 8560248  T
Q  567 caattttgacaaccttg 583  Q
    | ||||||| |||||||    
T  8560247 cgattttgataaccttg 8560231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 581
Target Start/End: Original strand, 19348818 - 19348906
Alignment:
Q  493 taaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacct 581  Q
    ||||||||||  |||||| ||| |||||||||| | |||||||||||  || |||| ||| | ||||||| |||||||||||| |||||    
T  19348818 taaaatccttccattttgattgcgattttacgagtctcgattttgctactcccttttgacttgaagtaaagtctcaattttgataacct 19348906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 586
Target Start/End: Original strand, 22971055 - 22971166
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  || ||||  || | ||||||| || |||||||    
T  22971055 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactc-cttttaacttgaagtaaagtcccaatttt 22971153  T
Q  574 gacaaccttgttc 586  Q
    || ||||||||||    
T  22971154 gataaccttgttc 22971166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 25870250 - 25870210
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  25870250 aaaatccatcgattttgattgcgattttacaatttcttata 25870210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 42697049 - 42697089
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  42697049 aaaatccatcgattttgattgcgagtttatgatttcttata 42697089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 583
Target Start/End: Complemental strand, 15806281 - 15806222
Alignment:
Q  524 gattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    |||| ||||||||||| ||| ||||||| || ||| |||||||| |||||||||||||||    
T  15806281 gattttcgattttgcttttccctttcgagctgaagcaaaatctcgattttgacaaccttg 15806222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 532 - 583
Target Start/End: Complemental strand, 24649574 - 24649523
Alignment:
Q  532 attttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    |||||||| ||| |||||||||| ||||||| || |||||||||||||||||    
T  24649574 attttgctattccctttcgacctgaagtaaagtcccaattttgacaaccttg 24649523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 406
Target Start/End: Complemental strand, 9152985 - 9152935
Alignment:
Q  356 agatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||| |||| ||||||||||||||| ||| |||| |||||    
T  9152985 agatttcttataaactaagttatttatgactatatatcatgtatagcatat 9152935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 558
Target Start/End: Original strand, 13006089 - 13006155
Alignment:
Q  492 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaag 558  Q
    |||||||| ||  |||||| ||| |||||||||||| || |||||||| ||| ||||||||||||||    
T  13006089 gtaaaatcattcaattttgattgcgattttacgattttcaattttgctattccctttcgacctaaag 13006155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 29067523 - 29067631
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||| | ||| ||||||| || |  |||||||||| ||| | |||||||| ||||||| |  | |||||    
T  29067523 ttctacaaaaatccttgagtaaaatccttcgattt-gattgagattttatgagttccgattttgctattcccattcgacctgaagtaaagttccgatttt 29067621  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  29067622 gacaaccttg 29067631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 6861065 - 6861033
Alignment:
Q  329 aatccatcgattttgattgcgattttaagattt 361  Q
    ||||||||||||||||||||||||||| |||||    
T  6861065 aatccatcgattttgattgcgattttatgattt 6861033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 13286145 - 13286185
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||| |||| ||||||| |||||||||||    
T  13286145 aaaatccatcgattttcattgtgattttacgatttcttata 13286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 17064508 - 17064548
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||| ||||||  ||||||||||    
T  17064508 aaaatccatcgattttgattgcaattttacaatttcttata 17064548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 20756223 - 20756251
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  20756223 aaaatccatcgattttgattgcgatttta 20756251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 24620080 - 24619972
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||| | |  | |||||||| ||| |||| ||| | ||||||| |  | |||||    
T  24620080 ttctacaaaagtctttgagtaaaatccttcgattttgattgcgattttacaagtcccaattttgctattcccttttgacttgaagtaaagttccgatttt 24619981  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  24619980 gacaacctt 24619972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 27676572 - 27676612
Alignment:
Q  366 taaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||| |||||||||||||||||||  |||||||||||||    
T  27676572 taaaccgagtcatttatgactatatataatttataacatat 27676612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 27676637 - 27676677
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||| ||||||||||| ||||||| |||||||||||    
T  27676637 aaaatccattgattttgattgtgattttacgatttcttata 27676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 28745977 - 28746005
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  28745977 aaaatccatcgattttgattgcgatttta 28746005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 29067478 - 29067506
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  29067478 aaaatccatcgattttgattgcgatttta 29067506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 39428104 - 39428132
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  39428104 aaaatccatcgattttgattgcgatttta 39428132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 3e-68; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 228 - 406
Target Start/End: Original strand, 13100189 - 13100368
Alignment:
Q  228 ccattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| | |||||||||    
T  13100189 ccattattgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaataggc 13100288  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13100289 aaaaaccatcgattttgattgcgattttacaatttcttataaaccaagtcatttatgactatataccatttgtaacatat 13100368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 9955165 - 9954987
Alignment:
Q  229 cattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| | ||||||| ||||||| ||||||||| | |||||||||||||||||||||| |||||||  ||||||| | |||||| |||    
T  9955165 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagca 9955066  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  9955065 aaatccatcgattttgattgcgattttacgatttcttataaactaggtcatttatgactatataccatttataacatat 9954987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 13276391 - 13276218
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| || |||||| ||||||||||||||||| | |||||||||| ||||||||||  |||||||||||||||| | |||||||||||||||    
T  13276391 ttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaaaatc 13276292  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
     |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  13276291 aatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactatatatcatttataacatat 13276218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 12513285 - 12513458
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| ||||||||| ||| ||||||||||||| | |||||||||| |||||||||||||||||||||||| |||   ||||||  |||||||    
T  12513285 ttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaatc 12513384  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  12513385 catcgattttgattgcgattttacgatttcttataaactaagtcatttacgactatataccatatataacatat 12513458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 234 - 402
Target Start/End: Original strand, 23528660 - 23528829
Alignment:
Q  234 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| | |||||||  ||||||  |||||||| | |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||    
T  23528660 ttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 23528759  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 402  Q
     ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  23528760 tatcgattttgaatgcgattttacgatttcttataaacgaagtcatttatgactatataccatttataac 23528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 42180190 - 42180017
Alignment:
Q  234 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| | |||||||||||||||  |||||||| | ||||||||| |||||||||| ||||||||||||||||||   ||||||||||||||     
T  42180190 ttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaaata 42180091  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||| |||| || |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42180090 catcgattttgattgtgattctacgatttcttataaactaagtcatttatgactatataccatttataacatat 42180017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 228 - 406
Target Start/End: Complemental strand, 9352194 - 9352015
Alignment:
Q  228 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    ||||| |||||||||||| ||||||||| |||||||| ||| |||| | ||||||||||||||||| |||||||||| |||| ||| | | ||||||| |    
T  9352194 ccattgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatagac 9352095  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  9352094 aaaatccgtcgattttgattgcgattttatgatttcttataaactaagtcatttttgactatataccatttataacatat 9352015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 19010071 - 19009898
Alignment:
Q  234 ttgtcaaaatccg-acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    ||||||||||||| |||||||| |||||||  |||||||| | ||||| ||||||||||| |||| |||||||||||| ||| | |||||| ||||||||    
T  19010071 ttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaatc 19009972  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  19009971 catcgattttgattgcgattttacgatttcttataaattaagtcatttataactatataccatttataacatat 19009898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 9327345 - 9327165
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||| ||||||| ||||||||| ||||||| |||| |||| | ||||||| |||||||||||||||||||| |||||| ||| | ||||||| ||    
T  9327345 cattgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaatagaca 9327246  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtca--tttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||  ||| |||||||||||||||||||| ||||    
T  9327245 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttttttgactatataccatttataatatat 9327165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 16125588 - 16125407
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttctt---caccttcaacgactcaaatccatagtagaatacaaaaatag 324  Q
    ||||||| ||||||||| ||||||||| |||||||  |||||||| | ||||||||   |||||||||||||  |||||||||||| |||   |||||||    
T  16125588 cattattttcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaatag 16125489  T
Q  325 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  16125488 gcaaaatccattgattttgattgcgattttacgattttttataaactaagtcatttatgaatatataccatttataacatat 16125407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 18304941 - 18304767
Alignment:
Q  229 cattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaa-cgactcaaatccatagtagaatacaaaaataggc 326  Q
    |||| |||||||||||| | ||||||| |||||||| || ||||| | ||||||||||||||||| |||||||||| |||||||||||   ||||||| |    
T  18304941 cattgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagac 18304842  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 402  Q
    |||||||||| ||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||||| |||||    
T  18304841 aaaatccatcaattttgattgcga-tttacgatttcttataagctaagtcatttatgactatataccattcataac 18304767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 25146898 - 25146725
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||| |||||||  || ||||| | ||||||||||||||||||||||||||| ||||||||||| | ||||||| ||    
T  25146898 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagaca 25146799  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 402  Q
    || | |||| ||||| ||||||| |||| |||||||||||||| |||| |||||||||||||||| |||||||||    
T  25146798 aagtacatcaattttaattgcga-tttacgatttcttataaactaagttatttatgactatatacaatttataac 25146725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 245 - 406
Target Start/End: Complemental strand, 9128953 - 9128792
Alignment:
Q  245 cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttga 344  Q
    |||||||||| ||||||  |||||| || | ||||||||||| || ||||||||||||  ||||||||||   ||||||| |||||| ||||||||||||    
T  9128953 cgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagacaaaattcatcgattttga 9128854  T
Q  345 ttgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| | |||||||||||||| |||| |||| |||||||||||||||||||||||||    
T  9128853 ttgcgatttgacgatttcttataaactaagttatttttgactatataccatttataacatat 9128792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 474 - 580
Target Start/End: Original strand, 47786104 - 47786209
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||    
T  47786104 ttctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacgattgtcgattttgctcttctctttcaacctaaag-aaaatcccgatttt 47786202  T
Q  574 gacaacc 580  Q
    |||||||    
T  47786203 gacaacc 47786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 475 - 583
Target Start/End: Original strand, 12513518 - 12513626
Alignment:
Q  475 tctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttg 574  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||| |||||| ||||||||    
T  12513518 tctacagaagtagttgagtaaaatcctttgattttggttgcgattttacaattgtcgattttgctcttctcttttgacctgaagcaaaatcccaattttg 12513617  T
Q  575 acaaccttg 583  Q
    |||||||||    
T  12513618 acaaccttg 12513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 41032800 - 41032661
Alignment:
Q  229 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| ||||||||||| ||||||||||  || |||  |||||||| | | ||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  41032800 cattgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggca 41032701  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||| ||||||||||||  ||||||||||    
T  41032700 aaatccatcgattttaattgcgattttacaatttcttata 41032661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 21846398 - 21846226
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| || |||||| |||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||   |||||||  |    
T  21846398 cattgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatagaaa 21846299  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||||||||||   |||| | ||||||   ||||||||| ||||||||  |||||||||||||    
T  21846298 aaatccatcgattttgattgcgatttt---atttttcataaac---gtcatttataactatatataatttataacatat 21846226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 318 - 406
Target Start/End: Original strand, 32881416 - 32881504
Alignment:
Q  318 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  32881416 aaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtcattcatgactatataccatttataacatat 32881504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 236 - 362
Target Start/End: Complemental strand, 17056122 - 17055995
Alignment:
Q  236 gtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcca 334  Q
    |||||||||| || |||||| |||||||| |||||||| ||| ||||| |||||||||||||||| ||||||||||||||   |||||| | ||||||||    
T  17056122 gtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataagtaaaatcca 17056023  T
Q  335 tcgattttgattgcgattttaagatttc 362  Q
    ||||||||||||||||||||| ||||||    
T  17056022 tcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 17869843 - 17869702
Alignment:
Q  265 aggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttctt 364  Q
    |||||||| | ||||||||||||||| |||||  ||||||| |||||||| | |||||||||||||| | |||||||||||||| |||||| ||||||||    
T  17869843 aggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaaattcttcgattttgattgcaattttacgatttctt 17869744  T
Q  365 ataaaccaagtcatttatgactatataccatttataacatat 406  Q
     ||||| ||||| ||||| || |||||| ||||| |||||||    
T  17869743 ttaaactaagtcttttataaccatatactatttacaacatat 17869702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 30619188 - 30619295
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| |||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||| | |||||    
T  30619188 ttctacaaaagtagttgagtaaaatccttcgatttttgttgcgattt-acgattgtcgattttgctcttctctttcgacctgaag-aaaatcccgatttt 30619285  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  30619286 gacaaccttg 30619295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 41032656 - 41032547
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||| ||| |||||| |||| |||||||||||| || |||||||||||||||||| |||| |||||||||| | |||||    
T  41032656 ttctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgattatcaattttgctcttctctttcaacctgaagtaaaatccctatttt 41032557  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  41032556 gacaaccttg 41032547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 306 - 406
Target Start/End: Original strand, 18228278 - 18228377
Alignment:
Q  306 tagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacata 405  Q
    ||||||||| | ||||||||||||||||||| |||||||||| ||||||| |||||||||||||  |||| |||||||||||||||||||||||||||||    
T  18228278 tagtagaatcccaaaataggcaaaatccatcaattttgattg-gattttatgatttcttataaattaagttatttatgactatataccatttataacata 18228376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 47785958 - 47786036
Alignment:
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47785958 aaatccatcggttttgattgcaattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 47786036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 474 - 580
Target Start/End: Original strand, 32881566 - 32881672
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||  |||||||||||||||||| |||||  |||| |||||||||||||||||||||||| ||||||||| | || ||| |||||| | |||||    
T  32881566 ttctacaaacgtagttgagtaaaatccttcgatttcagttgcgattttacgattgtcgattttgcttttctctttcaatctgaagcaaaatcccgatttt 32881665  T
Q  574 gacaacc 580  Q
    || ||||    
T  32881666 gaaaacc 32881672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 18337624 - 18337547
Alignment:
Q  256 ctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 333  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||  | ||||||||||||||||    
T  18337624 ctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggcaaaatcc 18337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 12800692 - 12800629
Alignment:
Q  247 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagta 310  Q
    |||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  12800692 acttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagta 12800629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 13100450 - 13100545
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||||||||||||||||||| ||| |||||||||| |  |||||||||  ||| |||||||| | ||||||| || | |||||||||||||||    
T  13100450 ttgagtaaaatcctttgattttgattgcgattttacgagttccgattttgccattccctttcgacttgaagtaaagtcccgattttgacaaccttg 13100545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 25146637 - 25146542
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||||||||||| ||||||| ||| ||||||||||||  |||||||||| ||| ||||| |||| ||||||| ||   |||||||||||||||    
T  25146637 ttgagtaaaatccttcgattttgattgcgattttacgatttccgattttgctattccctttcaacctgaagtaaagtcctgattttgacaaccttg 25146542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 234 - 304
Target Start/End: Original strand, 30619079 - 30619150
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatcc 304  Q
    |||||||||||| ||||||||| |||||||| |||||||| | | |||||||||||||||||||||||||||    
T  30619079 ttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 314
Target Start/End: Complemental strand, 14074495 - 14074414
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 314  Q
    |||||||||||| | ||||||| ||||||| ||||||||| | ||||||||||  |||||||||||||||||| ||||||||    
T  14074495 ttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaat 14074414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 16434755 - 16434864
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| | || ||||||||||||| ||||||| |||  ||||||||||| ||||||||||| ||| |||| |||||| || ||||||   |||||    
T  16434755 ttctacaaaagttgtcgagtaaaatccttcgattttgattgcaattttacgattttcgattttgctattcccttttgacctagagaaaaatcctgatttt 16434854  T
Q  574 gacaaccttg 583  Q
    ||||| ||||    
T  16434855 gacaatcttg 16434864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 302
Target Start/End: Original strand, 24117003 - 24117080
Alignment:
Q  226 atccattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaat 302  Q
    ||||||| |||||||||| || | |||||||||||||| || |||||||||||||| |||||||||||||| ||||||    
T  24117003 atccattgttgtcaaaattccaatttaaattctaaaatttaagattttacaactttattcaccttcaacgattcaaat 24117080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 13100391 - 13100431
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13100391 aaaatccatcgattttgattgcgattttaagatttcttata 13100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 14074366 - 14074258
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||||||||||| || |  | |||||||| ||| |||||||||| ||||||| ||   |||||    
T  14074366 ttctacaaaagtccttgagtaaaatccttcgattttgattgtgattttatgagttccaattttgctattccctttcgacctgaagtaaagtcctgatttt 14074267  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  14074266 gacaacctt 14074258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 567
Target Start/End: Complemental strand, 19009817 - 19009738
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctc 567  Q
    ||||||||||||||||||||||| ||| |||||||||| |  |||||||||| ||| ||||||| || ||||||| ||||    
T  19009817 ttgagtaaaatcctttgattttgattgcgattttacgagtcccgattttgctattccctttcgatctgaagtaaagtctc 19009738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 493 - 583
Target Start/End: Complemental strand, 9351927 - 9351837
Alignment:
Q  493 taaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    |||||||||  ||||||| ||| |||||||||| |  |||||||||| ||| |||||||||| ||||||| |||  |||||||||||||||    
T  9351927 taaaatcctacgattttgattgcgattttacgagtcccgattttgctattcgctttcgacctgaagtaaagtcttgattttgacaaccttg 9351837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 17055802 - 17055694
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| ||||||| ||| |||||||||| |  ||||||| |  | | |||||||||| |||||||  | | |||||    
T  17055802 ttctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttacaatcccctttcgacct-aagtaaagacccgatttt 17055704  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  17055703 gacaaccttg 17055694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 469 - 580
Target Start/End: Complemental strand, 17197417 - 17197306
Alignment:
Q  469 attggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctca 568  Q
    |||| |||||||||| |  ||||||||||||||| |||||| |||| |||||||||| |  ||||||||||  || |||||||| | ||||||| || |     
T  17197417 attgattctacaaaagtccttgagtaaaatccttcgattttagttgcgattttacgagttccgattttgctactccctttcgacttgaagtaaagtcccg 17197318  T
Q  569 attttgacaacc 580  Q
    ||||||| ||||    
T  17197317 attttgataacc 17197306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 17869619 - 17869524
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||||||||||||||||||| ||| |||||||||  |  |||||||||||||| |||| ||||| || || | || | |||||||||| ||||    
T  17869619 ttgagtaaaatcctttgattttgattgcgattttacgtgtcccgattttgctcttcccttttgacctgaattagagtcccgattttgacaatcttg 17869524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 581
Target Start/End: Complemental strand, 21846157 - 21846050
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| ||||||| || |  |||||||||| ||| ||||||||||  |||||| ||   |||||    
T  21846157 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttaagagtcccgattttgctattccctttcgacctggagtaaagtcctgatttt 21846058  T
Q  574 gacaacct 581  Q
    ||||||||    
T  21846057 gacaacct 21846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 588
Target Start/End: Complemental strand, 9954823 - 9954765
Alignment:
Q  530 cgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgttctc 588  Q
    |||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||    
T  9954823 cgattttgctattccctttcgaccttaagtaaagtcccgattttgacaaccttgttctc 9954765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 562
Target Start/End: Complemental strand, 9954898 - 9954828
Alignment:
Q  492 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 562  Q
    ||||||||||| ||||||| ||| |||||||||| |  |||||||||| ||| |||||||||| |||||||    
T  9954898 gtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgaccttaagtaaa 9954828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 565
Target Start/End: Original strand, 22789446 - 22789520
Alignment:
Q  491 agtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatc 565  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||| ||  || |||| ||||| |||| |||||    
T  22789446 agtaaaatcctttgattttgattgtgattttacgatttgcgatttttctaatcccttttgacctgaagtcaaatc 22789520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 234 - 314
Target Start/End: Complemental strand, 27917577 - 27917496
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 314  Q
    |||||||||||| |||||||||||| |||||||||||||| | | ||| || ||||||||| || ||||| ||||| |||||    
T  27917577 ttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttcaacaacccaaattcatagcagaat 27917496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 562
Target Start/End: Complemental strand, 16125324 - 16125250
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 562  Q
    ||||||||||||||| ||||||| ||| |||||||||| |  | ||||| || ||| |||||||||| |||||||    
T  16125324 ttgagtaaaatccttcgattttgattgcgattttacgagtcccaattttactattccctttcgacctgaagtaaa 16125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 551
Target Start/End: Complemental strand, 39845135 - 39845061
Alignment:
Q  477 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcga 551  Q
    ||||||| ||||||||||||||| ||  |||||  |||  ||||||| ||| ||||||||||| |||||||||||    
T  39845135 tacaaaaatagttgagtaaaatcattcaattttaattgcaattttacaattttcgattttgctattctctttcga 39845061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 16125379 - 16125343
Alignment:
Q  331 tccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||||  ||||||||||    
T  16125379 tccatcgattttgattgcgattttacaatttcttata 16125343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 18304739 - 18304711
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  18304739 aaaatccatcgattttgattgcgatttta 18304711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 23528857 - 23528885
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  23528857 aaaatccatcgattttgattgcgatttta 23528885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 7e-63; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 31238107 - 31237929
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||   |||||||| |    
T  31238107 cattgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaataggaa 31238008  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  31238007 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgattatataccatttataacatat 31237929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 229 - 403
Target Start/End: Original strand, 30432418 - 30432593
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| || |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||   ||||||| ||    
T  30432418 cattgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagaca 30432517  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataaca 403  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  30432518 aaatccatcgattttgattgcaattttacgatttcttataaactaagtcatttattactatataccatttataaca 30432593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 1404782 - 1404960
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||   |||||||||||||||||||||| |||||||| ||||||| | ||| || |||    
T  1404782 cattgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactatgca 1404881  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||    
T  1404882 aaatccatcgattttgattgtgattttacgatttcttatatactaagtcatttatgactatacaccatttataacatat 1404960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 36429847 - 36430025
Alignment:
Q  229 cattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| | ||||||| ||| ||||||||||||| | ||||||||||||||||||||||||| | ||||| |||||   ||||||||||    
T  36429847 cattgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggca 36429946  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||| ||||| ||||||||    
T  36429947 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtaatttatgactatatatcatttctaacatat 36430025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 31578009 - 31578181
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| |||||||||  |||||| || |||||| | | |||||||||||||||||| | |||||| ||||||||| | |||||| ||||||||    
T  31578009 ttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaatc 31578107  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| ||||||||||| |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  31578108 catcaattttgattgcaattttacgatttattataaactaagtcatttatgactatataccatttataacatat 31578181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 265 - 406
Target Start/End: Complemental strand, 35566047 - 35565906
Alignment:
Q  265 aggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttctt 364  Q
    |||||||| | ||||||||||  ||||| ||||||||||||| ||||||| | |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  35566047 aggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaaatccatcgattttgattgcagttttacgatttctt 35565948  T
Q  365 ataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  35565947 ataaacaaagtcatttatgactatatacaatttataacatat 35565906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 229 - 355
Target Start/End: Complemental strand, 23863451 - 23863324
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| |||||||||||||||||| || ||||| | ||||||||||| |||||||||| ||||||||||||||||   ||||||||||    
T  23863451 cattgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggca 23863352  T
Q  328 aaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||| |||||||||||    
T  23863351 aaatccatcgattttggttgcgatttta 23863324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 404
Target Start/End: Original strand, 20063713 - 20063889
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||  |||||||| | | |||| |   |||||||| |||||| |||| |||||||||||||||| | ||||||||||    
T  20063713 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 20063812  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacat 404  Q
    |||| |||||||||| |||||||||||| | |||||||| ||| || |||||||||||| |||||||||||| ||||    
T  20063813 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccatttatcacat 20063889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 277 - 399
Target Start/End: Complemental strand, 15588931 - 15588809
Alignment:
Q  277 ctttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtc 376  Q
    ||||||||||||||||| |||||||| |||||||||||   ||||||| ||||||| |||| |||| |||||||||||| |||||| ||||||| |||||    
T  15588931 ctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagacaaaatcaatcgttttttattgcgattttacgatttcatataaactaagtc 15588832  T
Q  377 atttatgactatataccatttat 399  Q
    |||||||| ||||||||||||||    
T  15588831 atttatgattatataccatttat 15588809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 19491885 - 19491982
Alignment:
Q  257 taaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||| | |||||||||| ||| |||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||    
T  19491885 taaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaat-ccaaaataggtaaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 318 - 406
Target Start/End: Complemental strand, 1690768 - 1690680
Alignment:
Q  318 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  1690768 aaaataggcgaaacccattgattttgattgcgattttacgatttcttataaactaagtcttttatgactatataccatttataaaatat 1690680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 580
Target Start/End: Complemental strand, 15588724 - 15588632
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacc 580  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||||| || |||||||||||||| ||| ||||||||||| |||||||||    
T  15588724 ttgagtaaaatccttcgattttggttgcgattttatgattgtcgatttttcttttctctttcgacctgaagcaaaatctcaatattgacaacc 15588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 25539340 - 25539222
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    |||| |||||| |||||||  | || ||| ||| |||||||||||||||||||| |||||||||| ||||| | |||||| |||||||||||||||||||    
T  25539340 ccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaatccatcgattttg 25539241  T
Q  344 attgcgattttaagatttc 362  Q
    | |||||||| | ||||||    
T  25539240 actgcgatttaacgatttc 25539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 582
Target Start/End: Original strand, 8428461 - 8428576
Alignment:
Q  467 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 566  Q
    |||||| |||||||||| |||||||| ||||||||| ||||||| ||| |||||||  ||| | |||||| || ||| |||||||||||||| ||||||     
T  8428461 atattgattctacaaaaatagttgagcaaaatccttcgattttgattgcgattttagaatttttgatttttctattccctttcgacctaaagcaaaatcc 8428560  T
Q  567 caattttgacaacctt 582  Q
    | ||||||||||||||    
T  8428561 cgattttgacaacctt 8428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 1690894 - 1690785
Alignment:
Q  227 tccattattgtcaaaa-tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaatagg 325  Q
    |||||| ||||||||| ||||||||||||  |||||| |||||||||   ||||||||||||||| |||||||| |||||||||| ||| | ||||||||    
T  1690894 tccattgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaatagg 1690795  T
Q  326 caaaatccat 335  Q
    ||||| ||||    
T  1690794 caaaacccat 1690785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 19245835 - 19245944
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||| |||||||||||| ||||||| ||| |||||||||||| | ||||||||| ||| ||||| || | ||| |||||| | |||||    
T  19245835 ttctacaaaagtagttaagtaaaatccttagattttgattgcgattttacgatttttgattttgctattccctttcaacttgaagcaaaatcccgatttt 19245934  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  19245935 gacaaccttg 19245944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 1405029 - 1405137
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| ||||||| || |  |||||||||| ||| |||| |||||||| |||| |||| |||||    
T  1405029 ttctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtaccgattttgctattcccttttgacctaaattaaagtctcgatttt 1405128  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  1405129 gacaacctt 1405137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 31023255 - 31023325
Alignment:
Q  261 atctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaat 331  Q
    |||||||||||| | ||||| ||||| ||||||||||||||| ||||||||||| | ||||||||||||||    
T  31023255 atctaggattttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaataggcaaaat 31023325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 20063969 - 20064078
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||| ||| ||||||| ||| |||||||||| | ||||||||||| ||| ||||| |||| |||||||  | | |||||    
T  20063969 ttctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaagccccgatttt 20064068  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  20064069 gacaaccttg 20064078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 554
Target Start/End: Complemental strand, 35565840 - 35565757
Alignment:
Q  474 ttctacaaaattagttgagtaa---aatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 554  Q
    |||||||||| |||||||||||   ||||||| |||||| |||| |||||||| ||| ||||||||||||||||| ||||||||    
T  35565840 ttctacaaaagtagttgagtaataaaatccttcgattttagttgcgattttacaattatcgattttgctcttctccttcgacct 35565757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 586
Target Start/End: Complemental strand, 23863352 - 23863261
Alignment:
Q  494 aaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgttc 586  Q
    ||||||| | ||||||||||| |||||||||| ||| ||||||||| |||||||||||| | ||| |||| | ||||||| ||||||||||||    
T  23863352 aaaatccatcgattttggttgcgattttacgaatgttgattttgcttttctctttcgacttgaagcaaaa-cccaattttaacaaccttgttc 23863261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 332
Target Start/End: Original strand, 34841584 - 34841659
Alignment:
Q  257 taaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||| ||||||| | | ||||| ||||||||||||||||||||||||||| ||||||| |||| | ||||||||    
T  34841584 taaaatttaggattctgcgactttattcaccttcaacgactcaaatccataggagaataccaaaacatgcaaaatc 34841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 246 - 328
Target Start/End: Original strand, 16766727 - 16766809
Alignment:
Q  246 gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaa 328  Q
    |||||||||  |||||| ||||||||||| | ||| |||||||||||||| |||||||||||| ||||| | |||||| ||||    
T  16766727 gacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaataagcaa 16766809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 13502556 - 13502448
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||||| ||| ||||||  |||||| ||  |||||||||||| |||||||| |||||| ||||| || | ||  ||||| ||||||||    
T  13502556 ttctacaaaaatagttgactaatatccttcaattttgattacgattttacgattttcgattttactcttccctttccacttgaaacaaaat-tcaatttt 13502458  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  13502457 gacaaccttg 13502448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 13502601 - 13502561
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  13502601 aaaatccatcgattttgattgcgattttacgatttcttata 13502561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 25539028 - 25538920
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||| ||||||||||||| |||||| ||| ||||||||||    ||||||| || ||| |||||||||| | ||||| |  | |||||    
T  25539028 ttctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacgagacccgatttttctattccctttcgacctgatgtaaagtaccgatttt 25538929  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  25538928 gacaacctt 25538920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 16767031 - 16767140
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacga-ttgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 572  Q
    ||||| |||| ||||||||||||||||||  |||||| ||| ||||||| || || |||||||||||||||  ||| ||||| ||| |||||  |||| |    
T  16767031 ttctataaaagtagttgagtaaaatccttcaattttgattgcgattttatgatttttcgattttgctcttcctttttgacctgaagcaaaattccaatgt 16767130  T
Q  573 tgacaacctt 582  Q
    ||| ||||||    
T  16767131 tgaaaacctt 16767140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 587
Target Start/End: Complemental strand, 19262199 - 19262086
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  |||||||||||| || ||||||| ||| |||||||||| |  |||||||||| ||| | |||||| | ||||||| |  | ||||     
T  19262199 ttctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgagtcccgattttgctattcccattcgacttgaagtaaagttccgatttc 19262100  T
Q  574 gacaaccttgttct 587  Q
    ||||||||||||||    
T  19262099 gacaaccttgttct 19262086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 575
Target Start/End: Complemental strand, 20034105 - 20034004
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  |||||||||||||||  |||||| ||| |||||||||| | |||||||||||  || |||||||| | ||||||| || | |||||    
T  20034105 ttctacaaaagtccttgagtaaaatccttcaattttgattgcgattttacgagtctcgattttgctactccctttcgacttgaagtaaagtcccgatttt 20034006  T
Q  574 ga 575  Q
    ||    
T  20034005 ga 20034004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 15588782 - 15588742
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  15588782 aaaatccatcgattttgattgcgattttataatttcttata 15588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 562
Target Start/End: Complemental strand, 27523979 - 27523891
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 562  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  || |||||||| | |||||||    
T  27523979 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaa 27523891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 35565885 - 35565845
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  35565885 aaaatccatcgattttgattgtgattttatgatttcttata 35565845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 5395749 - 5395674
Alignment:
Q  257 taaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||| ||||||||| | ||||| |||| ||| || ||||||||||||||| |||||   |||||||||||||||    
T  5395749 taaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaataggcaaaatc 5395674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 367
Target Start/End: Original strand, 27406993 - 27407032
Alignment:
Q  328 aaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  27406993 aaatccatcaattttgattgcgattttatgatttcttata 27407032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 974584 - 974694
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacga-ttgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 572  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| ||  ||||||||||  || |||||||| | ||||||| || | || |    
T  974584 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtttccgattttgctactccctttcgacttgaagtaaagtcccgatat 974683  T
Q  573 tgacaaccttg 583  Q
    ||| |||||||    
T  974684 tgataaccttg 974694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 578
Target Start/End: Original strand, 19492132 - 19492218
Alignment:
Q  492 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaa 578  Q
    ||||||||| | ||||||| ||  | |||||||||| |  |||||| | |||||||||||||| ||| ||||||| |||||||||||    
T  19492132 gtaaaatccatcgattttgattacggttttacgatttttaattttgttgttctctttcgacctgaagcaaaatcttaattttgacaa 19492218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 552
Target Start/End: Original strand, 27407042 - 27407116
Alignment:
Q  479 caaaattagttgagtaaaatcctttgattttggttgtgattttacga-ttgtcgattttgctcttctctttcgac 552  Q
    ||||| |||||||||||||| ||| ||||||| ||| ||| |||||| || |||||||||||||||  |||||||    
T  27407042 caaaagtagttgagtaaaattcttggattttgattgcgatattacgatttttcgattttgctcttccttttcgac 27407116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 583
Target Start/End: Complemental strand, 1690570 - 1690509
Alignment:
Q  523 cgattgtcgattttgctcttctctttcgacctaaag-taaaatctcaattttgacaaccttg 583  Q
    ||||||| ||||||||||||||||||| |||| |||  |||||| | |||||||||||||||    
T  1690570 cgattgttgattttgctcttctctttcaacctgaagcaaaaatcccgattttgacaaccttg 1690509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 29660903 - 29660936
Alignment:
Q  239 aaaatccgacttaaattctaaaatctaggatttt 272  Q
    |||||||||||||||| |||||||||||||||||    
T  29660903 aaaatccgacttaaatcctaaaatctaggatttt 29660936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 374 - 406
Target Start/End: Complemental strand, 5395507 - 5395475
Alignment:
Q  374 gtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||| |||||||||||||    
T  5395507 gtcatttatgactatatacaatttataacatat 5395475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 17995069 - 17995157
Alignment:
Q  243 tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaat 331  Q
    |||||||||||  |||||||| || ||||| | | ||| |||||| |||||||||||||| | ||| | ||| | ||||||||||||||    
T  17995069 tccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaattcgtagcataattccaaaataggcaaaat 17995157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 19245152 - 19245232
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 308  Q
    |||| |||||||||||| |||||||||| ||||||  |||||||||| |||||  ||| ||| | ||| ||||||||||||    
T  19245152 cattgttgtcaaaatcccgacttaaattttaaaattcaggattttacgactttactcatctttagcgattcaaatccatag 19245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 578
Target Start/End: Original strand, 31062311 - 31062411
Alignment:
Q  478 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgaca 577  Q
    |||||| ||||||||||||||| || ||||||| |||  || |||| ||| |  ||||| |||||| |||||||| | ||| |||||| ||||||| |||    
T  31062311 acaaaagtagttgagtaaaatctttcgattttgattgcaatgttacaattttttattttactcttccctttcgacatgaagcaaaatcccaattttaaca 31062410  T
Q  578 a 578  Q
    |    
T  31062411 a 31062411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 34841784 - 34841816
Alignment:
Q  329 aatccatcgattttgattgcgattttaagattt 361  Q
    ||||||||||||||||||||||||||| |||||    
T  34841784 aatccatcgattttgattgcgattttacgattt 34841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 31424162 - 31424340
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||| | ||||||||||||||||||||| ||||| | ||||||||||    
T  31424162 cattattgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggca 31424261  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  31424262 aaatccattgattttgattgcgattttacgatttcttataaactaagtcgtttatgactatataccaattataacatat 31424340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 22910316 - 22910154
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||||   |||||||||||||||||| |||||||    
T  22910316 ccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaataggcaaaatccattgattttg 22910217  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  22910216 attgcgattttaagatttcttataaattaagtaatttatgactatataccatttataacatat 22910154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 11879599 - 11879777
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||| | ||||||||| |||||||  |||||||| ||||||||||||| |||||||||||||||| |||||||||| | |||||||| |    
T  11879599 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11879698  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  11879699 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatat 11879777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 11897015 - 11897193
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||| | ||||||||| |||||||  |||||||| ||||||||||||| |||||||||||||||| |||||||||| | |||||||| |    
T  11897015 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11897114  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  11897115 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatat 11897193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 15294685 - 15294847
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||| |||||||  |||||||| | ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  15294685 ccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaatccatcgattttg 15294784  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||| || |||| ||||||||    
T  15294785 attgcgattttacaatttcttataaactaagtcatttatgactatacactatttgtaacatat 15294847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 15475054 - 15475216
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||| |||||||  |||||||| | ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  15475054 ccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaatccatcgattttg 15475153  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||| || |||| ||||||||    
T  15475154 attgcgattttacaatttcttataaactaagtcatttatgactatacactatttgtaacatat 15475216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 249 - 406
Target Start/End: Complemental strand, 29384425 - 29384269
Alignment:
Q  249 ttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgc 348  Q
    |||||| |||||||||  |||||| | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||    
T  29384425 ttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaataggcaaaattcatcga-tttgattgc 29384327  T
Q  349 gattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  29384326 gattttacgatttcttataaaacaattcatttatgactatataccatttataacatat 29384269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 228 - 406
Target Start/End: Original strand, 5922047 - 5922226
Alignment:
Q  228 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    ||||| |||||||||||| ||||||||| |||||||| ||||||||   |||||||||||||||||||||| | |||||||||||||| | ||||||| |    
T  5922047 ccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagac 5922146  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||||||||||||  |||||||||||||  | ||||||||||||||||||||||| |||||||||    
T  5922147 aaaatccatcgattttgattgcgattttgcgatttcttataaattaggtcatttatgactatataccattcataacatat 5922226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 276 - 406
Target Start/End: Complemental strand, 19704537 - 19704407
Alignment:
Q  276 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 375  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  19704537 actttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaaatccatcgattttgattgcaattttacgatttcttataaaccaagt 19704438  T
Q  376 catttatgactatataccatttataacatat 406  Q
     ||||||||||||||||||||| ||||||||    
T  19704437 tatttatgactatataccatttgtaacatat 19704407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 45403033 - 45403206
Alignment:
Q  234 ttgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    ||||||||||| ||||||||||||||||||| | |||||| | |||||||| ||||||||||||| |||||||||| |||||   |||||| ||||||||    
T  45403033 ttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaaaatc 45403132  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||||||  ||||||||||||||||||||    
T  45403133 catcgattttgattgcgattttacgattccttatcaaccaagtcatttatgataatataccatttataacatat 45403206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 278 - 406
Target Start/End: Original strand, 23142224 - 23142352
Alignment:
Q  278 tttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtca 377  Q
    |||||||| ||||||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||||||  ||||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtca 23142323  T
Q  378 tttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||||||||||||    
T  23142324 tttatgactatataccatttataacatat 23142352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 233 - 406
Target Start/End: Complemental strand, 3094379 - 3094195
Alignment:
Q  233 attgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaat 331  Q
    |||||||||||  ||||||||||  ||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  3094379 attgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaat 3094280  T
Q  332 ccatcgattttgattgcgattttaagatttct----------tataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||||||| ||||| |          ||||||| |||||||||||||||||||||||||||||||||||    
T  3094279 ccatcgattttgattgcgattttacgattttttttttttttatataaactaagtcatttatgactatataccatttataacatat 3094195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 276 - 406
Target Start/End: Original strand, 6810869 - 6810998
Alignment:
Q  276 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 375  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||||| |||||||| |||||| ||||||| ||||    
T  6810869 actttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaatc-atcgattttgattacgattttacgatttcatataaactaagt 6810967  T
Q  376 catttatgactatataccatttataacatat 406  Q
    ||||||| |||||||| ||||||||||||||    
T  6810968 catttataactatatatcatttataacatat 6810998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 248 - 406
Target Start/End: Original strand, 32424354 - 32424509
Alignment:
Q  248 cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattg 347  Q
    ||||||||||||||| ||||||||||  ||||| ||||   | ||||| |||||| ||||||||||| | ||||||| ||||||  || |||||||||||    
T  32424354 cttaaattctaaaatttaggattttatgacttttttca---ttaacgattcaaattcatagtagaatcctaaaatagacaaaatttatagattttgattg 32424450  T
Q  348 cgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  32424451 cgattttacgatttattatatactaagtcatttatgactatataccatttataacatat 32424509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 234 - 380
Target Start/End: Original strand, 17646997 - 17647144
Alignment:
Q  234 ttgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||| |||||||||||  ||||||  |||||||| | ||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||     
T  17646997 ttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaaaatt 17647096  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcattt 380  Q
    |||||||||||||||  |||| | ||||||||||||||| ||||||||    
T  17647097 catcgattttgattgttatttaacgatttcttataaacctagtcattt 17647144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 282 - 404
Target Start/End: Complemental strand, 27836540 - 27836418
Alignment:
Q  282 ttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcattta 381  Q
    |||||||||||| ||| |||||||||||||||| | |||||| ||||||| |||| ||||||||| | ||||||  ||||||||||||| ||||||||||    
T  27836540 ttcaccttcaacaactgaaatccatagtagaattctaaaataagcaaaattcatcaattttgattacaattttacaatttcttataaactaagtcattta 27836441  T
Q  382 tgactatataccatttataacat 404  Q
    |||||||||||||||||||||||    
T  27836440 tgactatataccatttataacat 27836418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 29384195 - 29384086
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||| ||| |||||| | |||||    
T  29384195 ttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattgtcgatttttctcttttctttcgacctgaagcaaaatcccgatttt 29384096  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  29384095 gacaaccttg 29384086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 277 - 406
Target Start/End: Complemental strand, 7489368 - 7489235
Alignment:
Q  277 ctttcttcaccttcaacgactcaaatccatagtagaat----acaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaacca 372  Q
    ||||||||||||||||||||| |||||| |||||||||    |  ||||||| ||||||  ||||||||||||||| |||||| |||||||||||||  |    
T  7489368 ctttcttcaccttcaacgactaaaatccgtagtagaattctaaataaaatagacaaaatttatcgattttgattgcaattttatgatttcttataaatta 7489269  T
Q  373 agtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||| ||||||||||||||    
T  7489268 agtcatttatgactatatatcatttataacatat 7489235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 318 - 402
Target Start/End: Complemental strand, 9212295 - 9212211
Alignment:
Q  318 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 402  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  9212295 aaaataggaaaaatccatcgattttgattgcgattttaagatttcttataaactaaatcatttatgaccatataccatttataac 9212211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 17647243 - 17647351
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| ||||||||||||| ||| |||||| | |||||    
T  17647243 ttctacaaaactagttgagtaaaatccttcgattttgattgcgattttatgattgtcgattttgctcatctctttcgacctgaagcaaaatcccgatttt 17647342  T
Q  574 gacaacctt 582  Q
     ||||||||    
T  17647343 aacaacctt 17647351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 15231867 - 15231976
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||||||||||||| |  |||||| |||| ||||||||||||||||||||||||||||||||||||| | ||| |||||||| | |||    
T  15231867 ttctacaaaagtagttgagtaaaatcgtacgattttagttgcgattttacgattgtcgattttgctcttctctttcgacttgaagcaaaatctcgaattt 15231966  T
Q  574 gacaaccttg 583  Q
     |||||||||    
T  15231967 aacaaccttg 15231976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 485 - 582
Target Start/End: Original strand, 31424424 - 31424518
Alignment:
Q  485 tagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 582  Q
    ||||||||||||||||| |   |||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  31424424 tagttgagtaaaatcctgt---tttgattgcgattttacgattgtcgattttgctcatctctttcgacctgaagtaaaatctcgattttgacaacctt 31424518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 476 - 581
Target Start/End: Complemental strand, 3094125 - 3094020
Alignment:
Q  476 ctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttga 575  Q
    |||||||| || |||||||||||||||  ||||| ||||   |||||||||||||||||||||||| ||||||| ||||||||||||||||  |||||||    
T  3094125 ctacaaaagtaattgagtaaaatccttcaatttttgttgcagttttacgattgtcgattttgctctactctttccacctaaagtaaaatcttgattttga 3094026  T
Q  576 caacct 581  Q
    ||||||    
T  3094025 caacct 3094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 474 - 551
Target Start/End: Original strand, 6811065 - 6811142
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcga 551  Q
    |||||||||| ||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6811065 ttctacaaaagtagttgattaaaattcttcgattttggttgcgattttacgattgtcgattttgctcttctctttcga 6811142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 22910086 - 22909978
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||||| ||||||||||  |||| ||||| ||||||||||||||||||||| ||||||||||||||| | | |||||||| | |||||    
T  22910086 ttctacaaaaatagttgaataaaatccttcaatttcggttgcgattttacgattgtcgatttttctcttctctttcgacatgatgtaaaatc-cgatttt 22909988  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  22909987 gacaaccttg 22909978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 6292456 - 6292294
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    |||||||||||  |||||| || ||||||   ||||| |||| ||| ||||||||||| |||||||| ||| | |||||| | ||||| || ||||||||    
T  6292456 ccgacttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaataagaaaaattcaacgattttg 6292357  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||| | |||  |||| |||||| | ||||||||||| |||||||||||||||||| ||||    
T  6292356 attgcggtcttacaatttattataatctaagtcatttatcactatataccatttataaaatat 6292294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 467 - 579
Target Start/End: Complemental strand, 24056460 - 24056348
Alignment:
Q  467 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 566  Q
    |||||| |||||||||| |||||||||||||||||| ||||||| ||   |||||| |||  || |||||||||||| |||||||||| ||| |||||||    
T  24056460 atattgattctacaaaactagttgagtaaaatccttcgattttgattaccattttatgatattcaattttgctcttccctttcgacctgaagcaaaatct 24056361  T
Q  567 caattttgacaac 579  Q
    |  ||||||||||    
T  24056360 cggttttgacaac 24056348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 517 - 582
Target Start/End: Complemental strand, 9212206 - 9212141
Alignment:
Q  517 attttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 582  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||||||    
T  9212206 atttaacgattgtcgattttgctcttctctttcgaactaaaataaaattccaattttgacaacctt 9212141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 473 - 565
Target Start/End: Original strand, 17566343 - 17566435
Alignment:
Q  473 gttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatc 565  Q
    ||||||||||| |||||||||||||| ||| ||||||| |||  ||||||||||| || |||||||||||| |||| ||||| ||| ||||||    
T  17566343 gttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttcccttttgacctgaagcaaaatc 17566435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 24414170 - 24414062
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| | |  |||||||| ||| |||||||| | ||||||| |  |||||||    
T  24414170 ttctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacgagtctaaattttgctattccctttcgacatgaagtaaagttccaatttt 24414071  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  24414070 gacaacctt 24414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 11879864 - 11879955
Alignment:
Q  492 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||||||| ||||||| ||| |||||||||| |  ||||||| || ||| |||| ||||| |||||||||| | |||||||||||||||    
T  11879864 gtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaatcccgattttgacaaccttg 11879955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 11897280 - 11897371
Alignment:
Q  492 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||||||| ||||||| ||| |||||||||| |  ||||||| || ||| |||| ||||| |||||||||| | |||||||||||||||    
T  11897280 gtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaatcccgattttgacaaccttg 11897371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 6292250 - 6292193
Alignment:
Q  516 gattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    ||||| ||||||||||||||||||  |||||||||| |||||| ||||||||||||||    
T  6292250 gatttaacgattgtcgattttgctgatctctttcgatctaaagcaaaatctcaatttt 6292193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 477177 - 477101
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatcc 304  Q
    |||| |||||||||||| ||||||||| |||||||| ||||||||   ||||||||||||||||| |||| ||||||    
T  477177 cattgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 331
Target Start/End: Complemental strand, 15761570 - 15761466
Alignment:
Q  228 ccattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    ||||| ||||||||||| |||||||||| ||||| || ||||||||   | ||| || |||||||||||||||||| ||||| | ||| | |||||||||    
T  15761570 ccattgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaataggc 15761471  T
Q  327 aaaat 331  Q
    |||||    
T  15761470 aaaat 15761466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 29384240 - 29384200
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  29384240 aaaatccatcgattttgattgcgattttacgatttcttata 29384200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 578
Target Start/End: Original strand, 45403275 - 45403379
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  || |||||||||||| ||||||| ||| |||||||||| | ||||||||||| ||| |||||||| | || |||| || | |||||    
T  45403275 ttctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctattccctttcgacgtgaaataaagtcccgatttt 45403374  T
Q  574 gacaa 578  Q
    |||||    
T  45403375 gacaa 45403379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 571
Target Start/End: Complemental strand, 19704326 - 19704243
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatt 571  Q
    ||||||||| ||||||||||||| ||| |||||||||| |  |||||||||| ||| |||| ||| | |||||||||| |||||    
T  19704326 ttgagtaaattcctttgattttgattgcgattttacgagtcccgattttgctattccctttggacttgaagtaaaatcccaatt 19704243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 24056680 - 24056618
Alignment:
Q  246 gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 308  Q
    ||||||||| |||||||| |||||||| | ||||| ||||| || ||||||||||||||||||    
T  24056680 gacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatag 24056618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 2040380 - 2040453
Alignment:
Q  489 tgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 562  Q
    |||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  ||||||||||| | |||||||    
T  2040380 tgagtaaaatccttcgattttgattgcgattttacgagttccgattttgctactctctttcgacttgaagtaaa 2040453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 15294865 - 15294910
Alignment:
Q  322 taggcaaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||    
T  15294865 taggtaaaatccatggattttgcttgcgattttaagatttcttata 15294910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 15475234 - 15475279
Alignment:
Q  322 taggcaaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||    
T  15475234 taggtaaaatccatggattttgcttgcgattttaagatttcttata 15475279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 15761241 - 15761132
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| || ||||||||||||||| |||||   ||| |||||||||||| || ||||   ||||| |||||| | | ||| |||||| |||||||    
T  15761241 ttctacaaaagtaattgagtaaaatccttcgatttatattgcgattttacgattctcaatttcattcttccctttcggcttgaagcaaaatcccaatttt 15761142  T
Q  574 gacaaccttg 583  Q
     |||||||||    
T  15761141 aacaaccttg 15761132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 575
Target Start/End: Original strand, 16752269 - 16752370
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    ||||||||||||  ||||||||||||||| ||||||| ||| |||||||||| |  | ||||||||  || |||||||| | ||||||| |  |||||||    
T  16752269 ttctacaaaattccttgagtaaaatccttcgattttgtttgcgattttacgagtcccaattttgctactccctttcgacttgaagtaaagttccaatttt 16752368  T
Q  574 ga 575  Q
    ||    
T  16752369 ga 16752370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 15231774 - 15231850
Alignment:
Q  279 ttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgatttta 355  Q
    ||||||||||||||||||| |||| |||| || |||   ||||||||||||||||| |   ||||||||||||||||    
T  15231774 ttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaacatatttgattgcgatttta 15231850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 17647198 - 17647238
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  17647198 aaaatccatcgattttgattgcgattttacaatttcttata 17647238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 19704390 - 19704350
Alignment:
Q  322 taggcaaaatccatcgattttgattgcgattttaagatttc 362  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  19704390 taggtaaaatccatcgattttgattgtgattttaagatttc 19704350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 539
Target Start/End: Original strand, 7262008 - 7262073
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgct 539  Q
    |||||||||| |  |||||||||||||||| |||||| ||| |||||||||| |  ||||||||||    
T  7262008 ttctacaaaagtccttgagtaaaatcctttaattttgattgcgattttacgagtcccgattttgct 7262073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 6811021 - 6811060
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  6811021 aaaatccatcgattttgattgcgattttca-atttcttata 6811060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 15761286 - 15761258
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  15761286 aaaatccatcgattttgattgcgatttta 15761258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 367
Target Start/End: Original strand, 23142379 - 23142415
Alignment:
Q  331 tccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||||  ||||||||||    
T  23142379 tccatcgattttgattgcgattttacaatttcttata 23142415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 578
Target Start/End: Complemental strand, 26575000 - 26574896
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    ||||||| || |||||  |||||||||||  |||||| ||| |||||||||||  || ||||| || || |||||| |||| ||||||||| || ||| |    
T  26575000 ttctacataaatagttaggtaaaatccttcaattttgattgcgattttacgatattcaatttttctattgtctttctacctgaagtaaaatatccattct 26574901  T
Q  574 gacaa 578  Q
    |||||    
T  26574900 gacaa 26574896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 4e-58; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 24725607 - 24725429
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||| |||||||| | |||||||| |||||||||||||||||| ||||||||||||||||||||   ||||||||||    
T  24725607 cattgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaataggca 24725508  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| ||||||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24725507 aaatccatcaattttgattacgatttgacgatttcttataaactaagtcatttatgactatataccatttataacatat 24725429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 247 - 406
Target Start/End: Original strand, 27221436 - 27221595
Alignment:
Q  247 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 346  Q
    ||||||||||||||||  |||||||| | |||||||||| |||||||||||||||| |||||||||||   ||||| |||||||||||||||||||||||    
T  27221436 acttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggcaaaatccatcgattttgatt 27221535  T
Q  347 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27221536 gcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 27221595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 247 - 406
Target Start/End: Original strand, 14055269 - 14055428
Alignment:
Q  247 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 346  Q
    ||||| || |||||||| | |||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||    
T  14055269 acttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggcaaaatccatagattttgatt 14055368  T
Q  347 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  14055369 gcgattttacgacttcttataaactaagtcatttatgactatataccatttataacatat 14055428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 247 - 406
Target Start/End: Original strand, 14365297 - 14365456
Alignment:
Q  247 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 346  Q
    ||||| || |||||||| | |||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||    
T  14365297 acttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggcaaaatccatagattttgatt 14365396  T
Q  347 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  14365397 gcgattttacgacttcttataaactaagtcatttatgactatataccatttataacatat 14365456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 24990196 - 24990023
Alignment:
Q  234 ttgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||| ||||||||||| | ||||| |||||||||   |||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||    
T  24990196 ttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaaaatc 24990097  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||| |||||| |||||||||||||| || |||||||||||||||||| |||||||||||||    
T  24990096 catcgattttgattgcaattttacgatttcttataaactaaatcatttatgactatatactatttataacatat 24990023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 228 - 402
Target Start/End: Complemental strand, 26281440 - 26281266
Alignment:
Q  228 ccattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    ||||| |||||||||| |||||||||||  ||||||  |||||||| | ||||||||||||||||||||||||||||||| ||||||| | |||||| ||    
T  26281440 ccattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataagc 26281341  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 402  Q
    ||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||    
T  26281340 aaaatccatcgattttg-ttgcgatttaacgatttcttataaactaagtcatttatgactatataccatttataac 26281266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 5058533 - 5058706
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| ||||||||| |||||||  || ||||| | | |||||||||||||||||||  ||||||||||||||||   |||||||||||||||    
T  5058533 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaaatc 5058632  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |  |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5058633 ctacgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 5058706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 44944974 - 44944797
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcac----cttcaacgactcaaatccatagtagaatacaaaaataggcaa 328  Q
    |||||||||||| ||||||||| |||||||  |||||||| | |||||||||||    ||||||||| |||||||||||||||||| | ||||||| |||    
T  44944974 ttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatagtcaa 44944875  T
Q  329 aatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44944874 aatccatcgattttgattgggattttactatttcttataaactaagtcatttatgactatataccatttataacatat 44944797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 8346658 - 8346484
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| ||| |||||  |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  8346658 ttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaatc 8346559  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatatacca-tttataacatat 406  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||| |||| ||||||| || ||||||||||||    
T  8346558 catcgattttaattgcgattttacgatttcttataaactaagtcatctatgtctatatatcattttataacatat 8346484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 249 - 406
Target Start/End: Original strand, 4247376 - 4247533
Alignment:
Q  249 ttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgc 348  Q
    |||||| |||||||  ||||||||  |||||||||||| |||||| ||| |||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  4247376 ttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggcaaaattcatcgattttgattgc 4247475  T
Q  349 gattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  4247476 gattttatgatttcttataaactaagtcatttatgactatatatcatttgtaacatat 4247533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 219 - 406
Target Start/End: Complemental strand, 8330185 - 8329996
Alignment:
Q  219 tcttctaatccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaataca 317  Q
    ||||||||  |||| |||||||||||| ||| |||||||||||||  | |||||| | |||||||||||||||||||| |||||||||||||||||| |     
T  8330185 tcttctaaatcattgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatccc 8330086  T
Q  318 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatatacca-tttataacatat 406  Q
    |||||||| ||||| ||| |||||| |||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||    
T  8330085 aaaataggaaaaattcattgattttaattgcgattttacgattttttataaactaagtcatttatgactatataccattttataacatat 8329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 219 - 397
Target Start/End: Complemental strand, 8343940 - 8343761
Alignment:
Q  219 tcttctaatccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaataca 317  Q
    |||||||| ||||| |||||||||||  | | ||||| ||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||| |     
T  8343940 tcttctaaaccattgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatccc 8343841  T
Q  318 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccattt 397  Q
    |||||| | |||||||||| ||||| |||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||    
T  8343840 aaaatatgaaaaatccatcaattttaattgcgattttacgatttcttataaactaagtcatctatgattatataccattt 8343761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 5715294 - 5715466
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| ||||||||| |||||||  |||||||| | ||||| | |||||||||| ||| |||| ||||||||||| | |||||| |||||||     
T  5715294 ttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaaaatt 5715392  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  5715393 catcgattttgattgtgattttacgatttcttataaactaagtcatttatgattatataccatttataacatat 5715466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 229 - 382
Target Start/End: Complemental strand, 9685374 - 9685220
Alignment:
Q  229 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| ||||||||||| ||||||| || ||||||| ||||||||| | ||||| |||||||||||||||||||||||||| ||||||   ||||||| ||    
T  9685374 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 9685275  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttat 382  Q
    ||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  9685274 aaatccatcgattttaattgcgattttatgatttcttataaactaagtcatttat 9685220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 276 - 406
Target Start/End: Original strand, 17811394 - 17811524
Alignment:
Q  276 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 375  Q
    ||||| |||||||||||||||||||||||||||||||||   ||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  17811394 acttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttacgatttcttataaactaagt 17811493  T
Q  376 catttatgactatataccatttataacatat 406  Q
    ||||||| | |||||||||||||||| ||||    
T  17811494 catttataattatataccatttataaaatat 17811524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 244 - 399
Target Start/End: Original strand, 11324994 - 11325148
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||| |||||||  | ||||||   | |||||||||||||||||||||||||||||| |||||| | |||||||||||||| |||  ||||||    
T  11324994 ccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattcata-attttg 11325092  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttat 399  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  11325093 attgcgaatttacgatttcttataaactaagtcatttatgactatataccaattat 11325148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 39182259 - 39182397
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| ||| |||||||| ||||||||| ||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  39182259 cattgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggca 39182357  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||| |||||||||||  ||||||||||    
T  39182358 aaatccatcgattttggttgcgattttacaatttcttata 39182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 229 - 382
Target Start/End: Complemental strand, 7730472 - 7730319
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||| |||||||| ||| |||| | |||||||||||||| ||| ||||||||||| |||||||| | |||||||| |    
T  7730472 cattgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaa 7730374  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttat 382  Q
    |||||||||||||||||||| ||||||| |||||||||||||| || ||||||||    
T  7730373 aaatccatcgattttgattgagattttacgatttcttataaactaaatcatttat 7730319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 249 - 387
Target Start/End: Complemental strand, 27510052 - 27509914
Alignment:
Q  249 ttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgc 348  Q
    ||||||||||||||  |||||||| | | ||||||||| | |||||| ||||||| ||||||||||  ||||||||||||||| |||| |||||||||||    
T  27510052 ttaaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgc 27509953  T
Q  349 gattttaagatttcttataaaccaagtcatttatgacta 387  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  27509952 gattttacgatttcttataaactaagtcatttatgacta 27509914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 299 - 406
Target Start/End: Complemental strand, 20570944 - 20570837
Alignment:
Q  299 aaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccattta 398  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||||||||||||||    
T  20570944 aaatctatagtagaatctaaaaatagacaaaatccatcgattttgattgcaattttacgatttcttataaaataagtcatttatgactatataccattta 20570845  T
Q  399 taacatat 406  Q
    ||||||||    
T  20570844 taacatat 20570837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 234 - 391
Target Start/End: Complemental strand, 22687789 - 22687631
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| ||||||||| |||||||  |||| ||| | |||||||||| ||||||| |||||||||||| | ||||| | |||||||||||||||    
T  22687789 ttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaaaatc 22687690  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatata 391  Q
    ||||||||||||||||||||||| ||||||||| |||| ||  | || |||||||||||    
T  22687689 catcgattttgattgcgattttacgatttcttacaaactaaaaccttgatgactatata 22687631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 234 - 355
Target Start/End: Original strand, 11326390 - 11326512
Alignment:
Q  234 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| | ||||||| ||||||| ||||||||| | |||||||||||||||| ||||| ||||||||||||||||   |||||||||||||||    
T  11326390 ttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaaaatc 11326489  T
Q  333 catcgattttgattgcgatttta 355  Q
     ||||||||||||||||||||||    
T  11326490 tatcgattttgattgcgatttta 11326512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 39182402 - 39182511
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || ||| |||||| | |||||    
T  39182402 ttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattgtcgatttttctcttctctttggaactgaagcaaaatcacgatttt 39182501  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  39182502 gacaaccttg 39182511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 14055503 - 14055610
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||| |||||| | |||||    
T  14055503 ttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacctgaagcaaaatc-cgatttt 14055601  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  14055602 gacaacctt 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 14365531 - 14365638
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||| |||||| | |||||    
T  14365531 ttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacctgaagcaaaatc-cgatttt 14365629  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  14365630 gacaacctt 14365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 244 - 353
Target Start/End: Original strand, 8571258 - 8571367
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    |||||||||||  ||||||| |||||||| | |||||||||||||| |||||||||||||||||||||||| | |||||||  |||| ||||||||||||    
T  8571258 ccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccatcgattttg 8571357  T
Q  344 attgcgattt 353  Q
    ||||||||||    
T  8571358 attgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 22687150 - 22687042
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||| | |||||    
T  22687150 ttctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacgattctcgattttgctcttctctttcgatctgaagcaaaatcccgatttt 22687051  T
Q  574 gacaacctt 582  Q
     ||||||||    
T  22687050 aacaacctt 22687042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 1977707 - 1977790
Alignment:
Q  284 caccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||||||||||||||||||| | |||||| ||||||| | ||||||||||||||||||||| |||||||||||    
T  1977707 caccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattttaggatttcttata 1977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 234 - 351
Target Start/End: Complemental strand, 21846550 - 21846433
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| |||||||||||||||||  |||||||| | ||||| ||||| |||||||||||| |||||||||||||| | |||| ||| ||||||    
T  21846550 ttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaaaatc 21846452  T
Q  333 catcgattttgattgcgat 351  Q
     ||||||||||||||||||    
T  21846451 aatcgattttgattgcgat 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 474 - 581
Target Start/End: Original strand, 4574976 - 4575083
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||| ||| ||||||||||| ||| |||||||||||| | |||||| || ||| ||||| |||| ||| ||||||||||||||    
T  4574976 ttctacaaaagtagttgagtagaattctttgattttgattgcgattttacgatttttgattttactattccctttcaacctgaagaaaaatctcaatttt 4575075  T
Q  574 gacaacct 581  Q
    ||||||||    
T  4575076 gacaacct 4575083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 566
Target Start/End: Original strand, 1977808 - 1977886
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 566  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  1977808 ttgagtaaaatccttcgattttgattgcgattttacgattgtcgatttttctcttctctttcgacctgaagcaaaatct 1977886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 485 - 583
Target Start/End: Original strand, 11325235 - 11325333
Alignment:
Q  485 tagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||||||||| ||||  | |||||||| ||||||||||||||||||||||||||||||||| ||| | ||| || ||| |||||||||||||||||    
T  11325235 tagttgagtaaaacccttgaaatttggttgcgattttacgattgtcgattttgctcttctcttttgacgtgaagcaagatcccaattttgacaaccttg 11325333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 584
Target Start/End: Complemental strand, 10285756 - 10285676
Alignment:
Q  504 gattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgt 584  Q
    ||||||| ||| |||||||||||||| |||||| ||||||||||||||||| |||||||||| | ||||||||||||||||    
T  10285756 gattttgattgcgattttacgattgttgatttttctcttctctttcgacctgaagtaaaatcccgattttgacaaccttgt 10285676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 582
Target Start/End: Complemental strand, 26565438 - 26565323
Alignment:
Q  467 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 566  Q
    |||||| |||||||||| |||||||||||||||||| ||||||| ||  |||||||||||| ||| ||||| ||||| ||||  |||| ||| || |||     
T  26565438 atattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacgattttcgtttttgttcttcccttttaacctgaagaaagatcc 26565339  T
Q  567 caattttgacaacctt 582  Q
    ||||||||||||||||    
T  26565338 caattttgacaacctt 26565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 474 - 580
Target Start/End: Original strand, 8304332 - 8304438
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| |||||||||||||| |  ||||||||||  ||||||||||| | ||||||| |||| |||||    
T  8304332 ttctacaaaagtccttgagtaaaatccttcgattttgattgtgattttacgagtcgcgattttgctactctctttcgacttgaagtaaagtctcgatttt 8304431  T
Q  574 gacaacc 580  Q
    |||||||    
T  8304432 gacaacc 8304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 294 - 406
Target Start/End: Original strand, 6916847 - 6916956
Alignment:
Q  294 gactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatatacc 393  Q
    ||||||||| ||||||||||| | ||||  |  ||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||| ||| ||    
T  6916847 gactcaaattcatagtagaattctaaaa--gttaaaatccatcggttttgattgcgattttacgatttcttataaattaagtcatttatgact-tattcc 6916943  T
Q  394 atttataacatat 406  Q
    | |||||||||||    
T  6916944 agttataacatat 6916956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 246 - 406
Target Start/End: Complemental strand, 26617588 - 26617428
Alignment:
Q  246 gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccata--gtagaatacaaaaata--ggcaaaatccatcgattt 341  Q
    ||||| ||| |||||||  |||||||| | ||||| |||||||||||||||  |||| ||||  ||||||| | ||||||  ||||||||| ||||||||    
T  26617588 gactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaatataggcaaaatctatcgattt 26617489  T
Q  342 tgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||| ||  |||| || || |||||||||||||||||    ||||||||||||||    
T  26617488 tgattgcgattttacgagatcttgtagactaagtcatttatgactat----catttataacatat 26617428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 573
Target Start/End: Complemental strand, 8329862 - 8329763
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||||||||||||||||  |||||| |||  |||||| ||||||| |||||| | ||||||||| |||| ||| ||||||||||||||    
T  8329862 ttctacaaaagtagttgagtaaaatccttcaattttgattgcaattttatgattgtcaattttgttattctctttccacctcaagcaaaatctcaatttt 8329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 474 - 564
Target Start/End: Complemental strand, 8343685 - 8343595
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaat 564  Q
    |||||||||| |||||||||||||| ||| ||||||| |||   ||||||||||||| |||||| |||||||||||||||| ||| |||||    
T  8343685 ttctacaaaagtagttgagtaaaatacttcgattttgattgcatttttacgattgtcaattttgttcttctctttcgacctgaagcaaaat 8343595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 477 - 554
Target Start/End: Complemental strand, 7730239 - 7730162
Alignment:
Q  477 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 554  Q
    ||||||| ||||||||||||| | || ||||||||||| |||||||||||||  |||||||||||||||||| |||||    
T  7730239 tacaaaagtagttgagtaaaaccattcgattttggttgcgattttacgattgatgattttgctcttctcttttgacct 7730162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 474 - 587
Target Start/End: Complemental strand, 8346349 - 8346236
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    ||||| |||| |||||||||||||||||| ||||||| |||   | ||||||||||| |||||| |||||||||||||||  ||||||||||   |||||    
T  8346349 ttctataaaagtagttgagtaaaatccttcgattttgtttgcattcttacgattgtcaattttgttcttctctttcgaccggaagtaaaatcctgatttt 8346250  T
Q  574 gacaaccttgttct 587  Q
     ||||| |||||||    
T  8346249 aacaactttgttct 8346236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 554
Target Start/End: Complemental strand, 21846330 - 21846250
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 554  Q
    ||||| |||| ||||||| |||||||||| ||||||||||| ||||||| |||| | ||||||||||| ||||||||||||    
T  21846330 ttctataaaagtagttgattaaaatccttcgattttggttgcgattttaggatttttgattttgctctcctctttcgacct 21846250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 314
Target Start/End: Complemental strand, 8630088 - 8630002
Alignment:
Q  229 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 314  Q
    |||| ||||||||||| |||||||| | | ||||||||||||||| |||||||  | | ||||||||||||||||||||||||||||    
T  8630088 cattgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaat 8630002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 527
Target Start/End: Complemental strand, 8329927 - 8329874
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 527  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  8329927 ttctacaaaagtagttgagtaaaatcctttgattttgattgcgattttacgatt 8329874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 579
Target Start/End: Original strand, 17741890 - 17741997
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttc--tctttcgacctaaagtaaaatctcaatt 571  Q
    ||||| |||| ||||| ||||||||||||  |||||| |||  ||||||||||| ||||||||||| |||  ||||||||||| ||||||||||  ||||    
T  17741890 ttctaaaaaagtagttaagtaaaatccttcaattttgattgcaattttacgattttcgattttgctattctttctttcgacctgaagtaaaatcctaatt 17741989  T
Q  572 ttgacaac 579  Q
    || |||||    
T  17741990 ttaacaac 17741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 17811594 - 17811702
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  |||||||||||| || ||||||| ||| |||||||||| |  |||||||||| ||| |||| ||||| ||||||| || | |||||    
T  17811594 ttctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgaatcccgattttgctattcccttttgacctgaagtaaagtcccgatttt 17811693  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  17811694 gacaacctt 17811702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 491 - 582
Target Start/End: Complemental strand, 24989640 - 24989549
Alignment:
Q  491 agtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 582  Q
    |||||||||||| ||||||| |||  ||||||||| |  |||||||| | ||| |||||||||||||||||| || | ||||||||||||||    
T  24989640 agtaaaatccttcgattttgattgccattttacgagtcccgattttgttattccctttcgacctaaagtaaagtcccgattttgacaacctt 24989549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 4247552 - 4247597
Alignment:
Q  322 taggcaaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  4247552 taggtaaaatccatcgattttgattgcgattttatgatttcttata 4247597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 527
Target Start/End: Complemental strand, 8346414 - 8346361
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 527  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||| ||||||||    
T  8346414 ttctacaaaagtagttgagtaaaatcctttgattttgattgcgatattacgatt 8346361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 26617360 - 26617251
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| || ||||| |||||||||||| ||| |||| |||||| |||||| || ||||||  || || || ||||| ||| |||||  |||||||    
T  26617360 ttctacaaaaataattgagcaaaatcctttgaatttagttgcgatttttcgattggcggttttgcaattatcatttgacctgaagcaaaattccaatttt 26617261  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  26617260 gacaaccttg 26617251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 554
Target Start/End: Original strand, 30294492 - 30294571
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 554  Q
    ||||| |||| ||||| |||||||||||| ||||||| |||||| ||||||||| | ||||||||||||| || |||||||    
T  30294492 ttctataaaagtagttaagtaaaatccttcgattttgattgtga-tttacgatttttgattttgctcttccctctcgacct 30294571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 27221676 - 27221743
Alignment:
Q  490 gagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaa 557  Q
    ||||||||||||| ||||||| ||| |||||||||| |  |||||||||| | |||||||||||||||    
T  27221676 gagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctatactctttcgacctaaa 27221743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 4247602 - 4247711
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  |||||||||||||||||| |||| ||| |||||||||| |  | |||||  | ||| |||||||| | ||||||| || |||||||    
T  4247602 ttctacaaaaatccttgagtaaaatcctttgaatttgattgcgattttacgaatcccaatttttgtattccctttcgacttgaagtaaagtcccaatttt 4247701  T
Q  574 gacaaccttg 583  Q
    ||||| ||||    
T  4247702 gacaatcttg 4247711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 582
Target Start/End: Original strand, 5058778 - 5058882
Alignment:
Q  478 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgaca 577  Q
    ||||||||  |||| |||||||||| ||||||| |||  ||||||||| |  |||||||||| ||| |||| || || ||||||| || | |||||||||    
T  5058778 acaaaattccttgattaaaatccttcgattttgattgcaattttacgaattccgattttgctattcccttttgatctgaagtaaagtcccgattttgaca 5058877  T
Q  578 acctt 582  Q
    |||||    
T  5058878 acctt 5058882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 583
Target Start/End: Complemental strand, 8254037 - 8253958
Alignment:
Q  504 gattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||| ||| |||||||||| | |||||||||||  || |||||||  ||||||||| | |||||||||| |||||||    
T  8254037 gattttgattgcgattttacgagtctcgattttgctactccctttcgatttaaagtaaagtatcaattttgataaccttg 8253958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 556
Target Start/End: Complemental strand, 3696766 - 3696684
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaa 556  Q
    ||||||||||||| ||||||| |||||| | |||||||||||||| ||| | ||  |||| ||||| | ||||||||| ||||    
T  3696766 ttctacaaaattaattgagtagaatcctataattttggttgtgatcttatgttttacgatcttgctatcctctttcgatctaa 3696684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 406
Target Start/End: Complemental strand, 21846432 - 21846398
Alignment:
Q  372 aagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||| ||||||||||||||    
T  21846432 aagtcatttatgactatatatcatttataacatat 21846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 25842599 - 25842505
Alignment:
Q  489 tgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    |||||||||||||   |||||| ||| |||||||||| |  ||||||||||  || |||||||| | ||||||| || ||||||||| |||||||    
T  25842599 tgagtaaaatcctccaattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaagtcccaattttgataaccttg 25842505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 527
Target Start/End: Complemental strand, 21157576 - 21157523
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 527  Q
    |||||||||| ||||||| ||||||||||  |||||| ||| ||||||||||||    
T  21157576 ttctacaaaagtagttgaataaaatccttcaattttgattgagattttacgatt 21157523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 7730287 - 7730247
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  7730287 aaaatccatcaattttgattgcgattttacaatttcttata 7730247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 8329907 - 8329867
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||| | ||||||||||||||||||| |||||||||||    
T  8329907 aaaatcctttgattttgattgcgattttacgatttcttata 8329867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 8329972 - 8329932
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||| |||||||||||| |||||| |||||||||||    
T  8329972 aaaatccattgattttgattgcaattttacgatttcttata 8329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 17811549 - 17811577
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  17811549 aaaatccatcgattttgattgcgatttta 17811577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 21846375 - 21846335
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  21846375 aaaatccatcaattttgattgtgattttacgatttcttata 21846335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 522
Target Start/End: Complemental strand, 24725355 - 24725307
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgatttta 522  Q
    |||||||||| |  ||||||||||||||||||||||| ||| |||||||    
T  24725355 ttctacaaaagtccttgagtaaaatcctttgattttgattgcgatttta 24725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 24725400 - 24725372
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  24725400 aaaatccatcgattttgattgcgatttta 24725372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 24989701 - 24989673
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  24989701 aaaatccatcgattttgattgcgatttta 24989673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 4e-58; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 23897826 - 23897988
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||| |||||||  |||||||| | ||||||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  23897826 ccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcgaaatccatcgattttg 23897925  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23897926 attgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 23897988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 30912542 - 30912364
Alignment:
Q  229 cattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| | ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||   ||||||||||    
T  30912542 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggca 30912443  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  30912442 aaatccatagattttgattgcgattttacgatttcttataaactaagtcatttatgattatatatcatttatcacatat 30912364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 244 - 391
Target Start/End: Original strand, 17250072 - 17250219
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||||| |||||| | |||||||||||||| ||| |||||||    
T  17250072 ccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaaaattcattgattttg 17250171  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatata 391  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  17250172 attgcgattttacgatttcttataaactaagtcatttatgactatata 17250219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 15528235 - 15528062
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| ||||||||| |||||||  |||||||| | |||||||||||||| ||||||| |||| |||||||||||   ||||||| |||||||    
T  15528235 ttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaaaatc 15528136  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  15528135 catcgatttcgattgcgattttacgatttcttataaactaagtcatttataactatataccatttataacatat 15528062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 26053421 - 26053248
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| |||||||||  |||||||||||||||| | ||||||||||||||||| ||||||||| |||| |||||| | |||||| ||||||||    
T  26053421 ttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaaaatc 26053322  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| ||||||||||  |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  26053321 catcaattttgattgtcattttacgatttcttataaactaagttatttatgactatataccatttataacatat 26053248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 26073474 - 26073301
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| |||||||||  |||||||||||||||| | ||||||||||||||||| ||||||||| |||| |||||| | |||||| ||||||||    
T  26073474 ttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaaaatc 26073375  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| ||||||||||  |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  26073374 catcaattttgattgtcattttacgatttcttataaactaagttatttatgactatataccatttataacatat 26073301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 7223518 - 7223689
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||| ||||||| ||||||||| | |||||||||||||       || |||||||||||||||| | |||||| |||    
T  7223518 cattgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagca 7223610  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7223611 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 7223689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 17543870 - 17543692
Alignment:
Q  229 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| ||||||||||| |||||||||| |||||||  |||||||| | ||||| ||||| |||||||||||||||||||||||||||   |||||| |||    
T  17543870 cattgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataagca 17543771  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||| || |||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17543770 aaatctatggattttgattgcgattttactatttcttataaactaagtcatttacgactatataccatttataacatat 17543692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 276 - 406
Target Start/End: Original strand, 21354787 - 21354917
Alignment:
Q  276 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 375  Q
    |||||||| ||||||||||||| |||||||| ||||||| | ||||||| |||||||||||| |||| |||||||||||| |||||||||||||| ||||    
T  21354787 actttctttaccttcaacgacttaaatccatggtagaatcccaaaatagacaaaatccatcgttttttattgcgattttacgatttcttataaactaagt 21354886  T
Q  376 catttatgactatataccatttataacatat 406  Q
     ||||||||||||||||||||||||||||||    
T  21354887 aatttatgactatataccatttataacatat 21354917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 234 - 401
Target Start/End: Complemental strand, 7918506 - 7918338
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| |||||||||||||||||  |||||||| | ||||| |||||||||||||||| |||||||||||| ||| | || ||| ||||||||    
T  7918506 ttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaaaatc 7918407  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataa 401  Q
     |||||||||||||| ||||||  ||||| |||||||  |||||||||||||||||||| |||||||||    
T  7918406 aatcgattttgattgggattttgcgattttttataaattaagtcatttatgactatatatcatttataa 7918338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 244 - 372
Target Start/End: Complemental strand, 27233391 - 27233263
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||| |||||||| ||||||||   |||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||    
T  27233391 ccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttg 27233292  T
Q  344 attgcgattttaagatttcttataaacca 372  Q
    |||||||||||| ||||||||||| ||||    
T  27233291 attgcgattttatgatttcttatatacca 27233263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 276 - 400
Target Start/End: Complemental strand, 22498967 - 22498843
Alignment:
Q  276 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 375  Q
    |||||||||||||| |||||||||||||||||||| |||   ||||||| ||||||||||||||||| ||||| |||||| |||||||||||||| ||||    
T  22498967 actttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatcgattttaattgcaattttacgatttcttataaacgaagt 22498868  T
Q  376 catttatgactatataccatttata 400  Q
    |||||||||||||||||||| ||||    
T  22498867 catttatgactatataccatctata 22498843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 228 - 406
Target Start/End: Original strand, 19748331 - 19748510
Alignment:
Q  228 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    ||||| || ||||||||| |||||||||  || |||| ||||||||   | |||||||||||| || ||||||||||| |||||||||   |||||||||    
T  19748331 ccattgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaataggc 19748430  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||||| ||||||||| ||||    
T  19748431 aaaattcatcgattttgattgtgattttacgatttcttataaactaagtcatttaagactatatatcatttataaaatat 19748510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 234 - 388
Target Start/End: Complemental strand, 2912372 - 2912218
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| |||||||||  |||||| ||||||||| ||||||||| || ||||||||| ||||||| ||||||||||   |||||| |||||||     
T  2912372 ttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaatc-atagtagaatcttaaaataagcaaaatt 2912274  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactat 388  Q
    |||||||||||||||| |||||| ||||| |||||||| |||||||||||||||||    
T  2912273 catcgattttgattgcaattttacgattttttataaacaaagtcatttatgactat 2912218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 288 - 406
Target Start/End: Original strand, 17103254 - 17103372
Alignment:
Q  288 ttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgacta 387  Q
    ||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||| ||||| |||||    
T  17103254 ttcaacgactcaaatgcatagtagaatcccaaaatagacaaaatccatcgattttgattacgattttacgatttcttataaactaagttatttacgacta 17103353  T
Q  388 tataccatttataacatat 406  Q
    |||| ||||||| ||||||    
T  17103354 tatatcatttatgacatat 17103372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 229 - 404
Target Start/End: Complemental strand, 11327701 - 11327525
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||  |||||||| | | |||| |   |||||||| |||||| |||| |||||||||||||||| | ||||||||||    
T  11327701 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 11327602  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacat 404  Q
    |||| |||||||||| |||||||||||| | |||||||| ||| || |||||||||||| |||||||||||| ||||    
T  11327601 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccatttatcacat 11327525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 229 - 354
Target Start/End: Complemental strand, 6943590 - 6943464
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||| |||||||  |||||||| | |||||||||||||||||||||||||||| ||||||||||   ||||||| ||    
T  6943590 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagaca 6943491  T
Q  328 aaatccatcgattttgattgcgatttt 354  Q
    |||| ||||||||||||||||||||||    
T  6943490 aaattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 228 - 393
Target Start/End: Complemental strand, 10509154 - 10508989
Alignment:
Q  228 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    |||||||||||||||||| ||||||||| |||||||  || | |||   ||||||||||| ||||| |||||||||  |||||||||| | |||||||||    
T  10509154 ccattattgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaataggc 10509055  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatatacc 393  Q
    ||||| |||||||||||||| |||||||| || || |||||||| ||||||||||| ||||||||||    
T  10509054 aaaattcatcgattttgattacgattttacgacttattataaactaagtcatttat-actatatacc 10508989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 485 - 583
Target Start/End: Original strand, 23898067 - 23898165
Alignment:
Q  485 tagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| |||||||| ||| |||||| | |||||||||| ||||    
T  23898067 tagttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgctcttctcattcgacctgaagcaaaatcccgattttgacaatcttg 23898165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 579
Target Start/End: Original strand, 23506092 - 23506193
Alignment:
Q  478 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgaca 577  Q
    |||||| ||||||| |||||||||| ||||||  |||||||||||| ||| ||||||||||| |||||||||||| |||||||||||| | |||| ||||    
T  23506092 acaaaaatagttgactaaaatccttcgattttaattgtgattttacaattttcgattttgctattctctttcgacttaaagtaaaatccccatttcgaca 23506191  T
Q  578 ac 579  Q
    ||    
T  23506192 ac 23506193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 582
Target Start/End: Complemental strand, 30912286 - 30912181
Alignment:
Q  477 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgac 576  Q
    ||||||| ||||||| ||||||||||  |||||||||| |||||||||||| ||||||||||| ||||||||| |||| ||| |||||  | ||||||||    
T  30912286 tacaaaagtagttgaataaaatccttcaattttggttgagattttacgattatcgattttgctattctctttcaacctgaagcaaaattccgattttgac 30912187  T
Q  577 aacctt 582  Q
    ||||||    
T  30912186 aacctt 30912181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 474 - 572
Target Start/End: Complemental strand, 2912144 - 2912046
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 572  Q
    |||||||||| ||||||||||||||||||  |||| | || ||||||||||||| ||||||| ||||||||||||| |||| ||| |||||| ||||||    
T  2912144 ttctacaaaagtagttgagtaaaatccttcaatttcgattatgattttacgattatcgatttcgctcttctctttcaacctgaagcaaaatcccaattt 2912046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 7223761 - 7223870
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| |||  ||||||||| |  |||||||||| ||| |||||||||| ||||||| || | |||||    
T  7223761 ttctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgctattccctttcgacctgaagtaaagtcccgatttt 7223860  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  7223861 gacaaccttg 7223870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 314
Target Start/End: Complemental strand, 18491161 - 18491081
Alignment:
Q  235 tgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 314  Q
    ||||||||||| ||||||||| |||||||| || ||||| || |||| ||||||||||||||||||||||||||| |||||    
T  18491161 tgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaat 18491081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 3574047 - 3573984
Alignment:
Q  243 tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccat 306  Q
    ||||||||||||||||||||| || ||||  | |||||||||||||||||||||||||||||||    
T  3574047 tccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 579
Target Start/End: Complemental strand, 27614525 - 27614434
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaac 579  Q
    ||||||||||||||| ||||||| |||||||||||||| |  ||||||| || ||| |||||||||| ||||||| ||  ||||||||||||    
T  27614525 ttgagtaaaatccttcgattttgattgtgattttacgagtcccgattttactattccctttcgacctgaagtaaattcctaattttgacaac 27614434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 527
Target Start/End: Complemental strand, 4841712 - 4841659
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 527  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  4841712 ttctacaaaagtagttgagtaaaatcctttgattttgattgtgatttttcgatt 4841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 5422879 - 5422798
Alignment:
Q  228 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 308  Q
    ||||| |||||||||||| ||||||||| |||||||  | |||||| ||||||| |||||||||||||||||||||| ||||    
T  5422879 ccattgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatctatag 5422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 11327445 - 11327336
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||| ||| ||||||| ||| |||||||||| | ||||||||||| ||| ||||| |||| |||||||  | | |||||    
T  11327445 ttctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaagccccgatttt 11327346  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  11327345 gacaaccttg 11327336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 19748579 - 19748688
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  |||||||||| ||| ||||| |||| || |||| || | |||||    
T  19748579 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctattccctttcaacctgaattaaagtcccgatttt 19748678  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  19748679 gacaaccttg 19748688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 22498323 - 22498214
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  |||||||||||| ||  |||||| ||| |||||||||| |  | |||||||| ||| |||||||||| ||||||| || |||||||    
T  22498323 ttctacaaaagtctttgagtaaaatcgttcaattttgattgcgattttacgagtcccaattttgctattccctttcgacctgaagtaaagtcccaatttt 22498224  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  22498223 gacaaccttg 22498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 558
Target Start/End: Original strand, 31407561 - 31407639
Alignment:
Q  480 aaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaag 558  Q
    |||| ||||||||||||||| |||||||||| |||||||||||  ||| ||||||||| | ||| ||||| ||||||||    
T  31407561 aaaagtagttgagtaaaatcttttgattttgattgtgattttataattttcgattttgttattccctttcaacctaaag 31407639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 17543613 - 17543504
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||  ||||||| || |  |||||||||| |||  ||||||||| ||||||| || |||||||    
T  17543613 ttctacaaaagtccttgagtaaaatccttcgattttgatttcgattttatgagtcccgattttgctattccttttcgacctgaagtaaagtcccaatttt 17543514  T
Q  574 gacaaccttg 583  Q
     |||||||||    
T  17543513 aacaaccttg 17543504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 559
Target Start/End: Complemental strand, 10508881 - 10508829
Alignment:
Q  507 tttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagt 559  Q
    |||||||| |||||||||||||||||||||||||||| ||||| | |||||||    
T  10508881 tttggttgcgattttacgattgtcgattttgctcttcgctttctatctaaagt 10508829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 18491064 - 18491005
Alignment:
Q  255 tctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 314  Q
    ||||||||| || ||||| ||||||| ||||||||||| ||||||||||||||| |||||    
T  18491064 tctaaaatccagcattttgcaactttattcaccttcaatgactcaaatccatagcagaat 18491005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 562
Target Start/End: Original strand, 31108418 - 31108489
Alignment:
Q  491 agtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 562  Q
    ||||||||| |||||||||| ||| | |||||||| | ||||||||||| ||| |||||||||| |||||||    
T  31108418 agtaaaatcttttgattttgattgcggttttacgaatctcgattttgctattccctttcgacctgaagtaaa 31108489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 27614651 - 27614594
Alignment:
Q  351 ttttaagatttcttataaacca--agtcatttatgactatataccatttataacatat 406  Q
    ||||| |||||||||||||| |  | ||||||||||||||||||||||||||||||||    
T  27614651 ttttacgatttcttataaactataattcatttatgactatataccatttataacatat 27614594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 3573783 - 3573674
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctc-tttcgacctaaagtaaaatctcaattt 572  Q
    |||||||| | |||||||||||| ||||  ||||||| ||| |||||||||| |   ||||||||| ||| | ||||||||| ||||||| || | ||||    
T  3573783 ttctacaagagtagttgagtaaattcctacgattttgattgcgattttacgagtcctgattttgctattcccttttcgacctgaagtaaagtcccgattt 3573684  T
Q  573 tgacaacctt 582  Q
    ||||||||||    
T  3573683 tgacaacctt 3573674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 4842011 - 4841946
Alignment:
Q  266 ggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaat 331  Q
    ||||||| | ||||| ||||||||||||||||||||||| ||| ||||| | | ||||||||||||    
T  4842011 ggattttgcgactttattcaccttcaacgactcaaatccgtagcagaatcccataataggcaaaat 4841946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 539
Target Start/End: Complemental strand, 20432476 - 20432411
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgct 539  Q
    |||||||||| ||||| |||||||| |||  |||||| ||| |||||||||||| |||||||||||    
T  20432476 ttctacaaaactagttaagtaaaattcttcaattttgattgcgattttacgattttcgattttgct 20432411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 583
Target Start/End: Complemental strand, 7918240 - 7918124
Alignment:
Q  467 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 566  Q
    |||||| |||||||||| |  ||||||||||| ||| ||||||| |||  ||||||||| |   |||| |||| ||| |||||||||| |||||||  |     
T  7918240 atattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacgagtcctgattctgctattccctttcgacctgaagtaaagccc 7918141  T
Q  567 caattttgacaaccttg 583  Q
    | |||||||||||||||    
T  7918140 cgattttgacaaccttg 7918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 562
Target Start/End: Complemental strand, 15527993 - 15527905
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 562  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||| ||| |  |||||||||| ||  |||||||||| |||||||    
T  15527993 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttccgagttccgattttgctatttcctttcgacctgaagtaaa 15527905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 366
Target Start/End: Complemental strand, 4841757 - 4841718
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttat 366  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  4841757 aaaatacatcgattttgattgcgattttacgatttcttat 4841718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Complemental strand, 7918343 - 7918301
Alignment:
Q  363 ttataaaccaagtcatttatgactatataccatttataacata 405  Q
    |||||||  |||||||||||||||||||| |||||||||||||    
T  7918343 ttataaattaagtcatttatgactatatatcatttataacata 7918301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 583
Target Start/End: Original strand, 21354928 - 21355030
Alignment:
Q  481 aaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacc 580  Q
    |||||| ||| || |||||| | ||||||| ||| |||||||||| |   |||||| || ||| ||||| || | |||||||||| ||||||||||||||    
T  21354928 aaattatttgggtgaaatccatcgattttgattgcgattttacgagtcctgatttttctattccctttcaacttgaagtaaaatcccaattttgacaacc 21355027  T
Q  581 ttg 583  Q
    |||    
T  21355028 ttg 21355030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 368
Target Start/End: Complemental strand, 2912189 - 2912148
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataa 368  Q
    ||||||| |||||||||||||||||||||  |||||||||||    
T  2912189 aaaatccgtcgattttgattgcgattttacaatttcttataa 2912148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 355
Target Start/End: Original strand, 17103391 - 17103424
Alignment:
Q  322 taggcaaaatccatcgattttgattgcgatttta 355  Q
    |||| |||||||||||||||||||||||||||||    
T  17103391 taggtaaaatccatcgattttgattgcgatttta 17103424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 17103441 - 17103550
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| | | ||| ||| |||||||||| |   ||||||| | ||| |||||||| | ||||||| || | |||||    
T  17103441 ttctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacgagtcctgattttgttattccctttcgacttgaagtaaagtcccgatttt 17103540  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  17103541 gacaaccttg 17103550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 18490988 - 18490935
Alignment:
Q  255 tctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 308  Q
    ||||||||| || ||||| ||||||| |||||||||||||||| ||| ||||||    
T  18490988 tctaaaatccagcattttgcaactttattcaccttcaacgactgaaacccatag 18490935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 579
Target Start/End: Complemental strand, 26053179 - 26053074
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  |||||||||||| || ||||||| ||| |||||||||| |  | |||||||| ||  |||||||||| ||||||| ||   |||||    
T  26053179 ttctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaagtcctgatttt 26053080  T
Q  574 gacaac 579  Q
    ||||||    
T  26053079 gacaac 26053074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 579
Target Start/End: Complemental strand, 26073232 - 26073127
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  |||||||||||| || ||||||| ||| |||||||||| |  | |||||||| ||  |||||||||| ||||||| ||   |||||    
T  26073232 ttctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaagtcctgatttt 26073133  T
Q  574 gacaac 579  Q
    ||||||    
T  26073132 gacaac 26073127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 7918278 - 7918250
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  7918278 aaaatccatcgattttgattgcgatttta 7918250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 10508945 - 10508905
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  10508945 aaaatccatcaattttgattgcgattttacaatttcttata 10508905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 17543658 - 17543630
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  17543658 aaaatccatcgattttgattgcgatttta 17543630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 19748534 - 19748562
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  19748534 aaaatccatcgattttgattgcgatttta 19748562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 22498368 - 22498340
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  22498368 aaaatccatcgattttgattgcgatttta 22498340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 23898012 - 23898052
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||||||||| |||||||  ||||||||||    
T  23898012 aaaatccatcgattttgattgagattttacaatttcttata 23898052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 26053224 - 26053196
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  26053224 aaaatccatcgattttgattgcgatttta 26053196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 26073277 - 26073249
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  26073277 aaaatccatcgattttgattgcgatttta 26073249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 30912334 - 30912294
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||| ||||||||||| || |||||||||||    
T  30912334 aaaatccatcgattatgattgcgattctatgatttcttata 30912294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 33593089 - 33593057
Alignment:
Q  329 aatccatcgattttgattgcgattttaagattt 361  Q
    ||||||||||||||||||||||||||| |||||    
T  33593089 aatccatcgattttgattgcgattttatgattt 33593057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 3e-56; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 228 - 406
Target Start/End: Complemental strand, 21059286 - 21059108
Alignment:
Q  228 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||| |  ||||||||    
T  21059286 ccattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaataggc 21059188  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  21059187 aaaattcatcgattttgattgcgattttacgatttcttataaacgaagtcatttatgactataaaccatttataacatat 21059108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 18051660 - 18051485
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||| ||||||| ||||||||| | |||||||||| ||||||||||||||||| |||||||||| | ||||||||||    
T  18051660 cattgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaataggca 18051561  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||  |||||||||||||    
T  18051560 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtcatttatgac-atata--atttataacatat 18051485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 19578941 - 19579119
Alignment:
Q  229 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||| || ||||||||  ||||||| |||||||| | | |||||||||||||||||||| |||||||||||||||| | |||||| |||    
T  19578941 cattgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagca 19579040  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  19579041 aaatccatcgattttgattgcgactttacgatttcttataaactaagtcatttatgactatttaccattcataacatat 19579119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 43234872 - 43235045
Alignment:
Q  234 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| | ||||||| |||||||  |||||||| | |||||||||||||||||||||| |||||||||||||||| | |||||||| ||||||    
T  43234872 ttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaaaatc 43234971  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||||||| ||||||| |||||||||| ||| |||||||||||| ||||| ||||||||||||||||    
T  43234972 catcgattttgattgtgattttacgatttcttatcaactaagtcatttatgtctataaaccatttataacatat 43235045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 243 - 406
Target Start/End: Original strand, 18843729 - 18843892
Alignment:
Q  243 tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgatttt 342  Q
    |||||||||||| ||| |||  |||||||| | ||||||||||||||||||||||||||||||| ||||||| | ||||||| |||||| ||||||||||    
T  18843729 tccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaaattcatcgatttt 18843828  T
Q  343 gattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||| ||| || |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18843829 gattgcaattatacgatttcttataaactaagtcatttatgattatataccatttataacatat 18843892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 23172557 - 23172380
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaa--- 329  Q
    |||||||||||| ||||||||| ||||||| ||||||||| | |||||||||| ||||||||||| |||||||||||||||| | ||||||| ||||       
T  23172557 ttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaaatt 23172458  T
Q  330 -atccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
     ||| |||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  23172457 catcgatcgattttgatcgcgattttacgattttttataaactaagtcatttatgactatataccatttgtaacatat 23172380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 278 - 406
Target Start/End: Original strand, 19979648 - 19979776
Alignment:
Q  278 tttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtca 377  Q
    |||||||| |||||||||||||||| ||| ||||||| | |||| | ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  19979648 tttcttcatcttcaacgactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacgatttcttataaactaagtca 19979747  T
Q  378 tttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||||||||||||    
T  19979748 tttatgactatataccatttataacatat 19979776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 247 - 406
Target Start/End: Complemental strand, 41688775 - 41688617
Alignment:
Q  247 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 346  Q
    |||||||| ||||||| | ||||||| ||| |||||||||||||||||||| ||||  |||||| ||| | |||||| ||||||| ||||||||||||||    
T  41688775 acttaaatcctaaaat-tcggattttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgattttgatt 41688677  T
Q  347 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| |||||||||||||| || |||||||| ||||||||||||| |||||||||    
T  41688676 gcgattttacgatttcttataaactaaatcatttataactatataccattcataacatat 41688617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 234 - 391
Target Start/End: Complemental strand, 38158379 - 38158221
Alignment:
Q  234 ttgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||| ||||||||||| ||||||||||||||||| | |||||||| || |||||| ||||||||||| |||||||| | ||||||| |||||||    
T  38158379 ttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagacaaaatc 38158280  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatata 391  Q
    ||| ||||||| |||  |||||| |||||||||||||| || |||||||||||||||||    
T  38158279 cattgattttggttgttattttacgatttcttataaactaaatcatttatgactatata 38158221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 228 - 395
Target Start/End: Complemental strand, 22645850 - 22645681
Alignment:
Q  228 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 326  Q
    ||||| |||||||||||| ||||||||| |||||||| || ||||| | |||||||||||||||||||| | |||||||||||| ||| | |||||| |     
T  22645850 ccattgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagt 22645751  T
Q  327 aaaatccatcgattttgattgcgattttaagatttcttataaaccaa-gtcatttatgactatataccat 395  Q
    ||| |||||| ||||||||||||||||||  ||||||||||||| || ||||||||||||||||||||||    
T  22645750 aaattccatctattttgattgcgattttacaatttcttataaactaatgtcatttatgactatataccat 22645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 27340300 - 27340142
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    |||||||||||  |||||| || |||||| | |||||||||| ||||||||||||||||| ||||||||||   |||||||||||||| |||||||||||    
T  27340300 ccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatcgattttg 27340201  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| |||||||| ||||||||||||| ||||||||    |||||||||||||| ||||||||    
T  27340200 attgagattttaatatttcttataaactaagtcatt----actatataccatttgtaacatat 27340142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 234 - 354
Target Start/End: Original strand, 20923722 - 20923843
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| ||||||||| |||||||| || ||||| | |||||||||||||||||||||  |||||||||||||||| | |||||||||||| ||    
T  20923722 ttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaaagtc 20923821  T
Q  333 catcgattttgattgcgatttt 354  Q
    ||||||||||||||||||||||    
T  20923822 catcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 278 - 406
Target Start/End: Original strand, 20320992 - 20321119
Alignment:
Q  278 tttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtca 377  Q
    ||||||||||||||| |||| |||||||||||| ||| | |||||||  ||||| |||| | |||||||||||||||| || ||||||||||| ||||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacga-ttcttataaactaagtca 20321090  T
Q  378 tttatgactatataccatttataacatat 406  Q
    |||||||| ||||| ||||||||||||||    
T  20321091 tttatgaccatatatcatttataacatat 20321119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 467 - 585
Target Start/End: Original strand, 24648248 - 24648368
Alignment:
Q  467 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 566  Q
    |||||| |||||||||| |||||||||||||||||||||||||| ||  |||||||||||| |||||||| |||||| |||||||||||||  ||||  |    
T  24648248 atattgattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattttcgattttactcttccctttcgacctaaaaaaaaaaat 24648347  T
Q  567 ca--attttgacaaccttgtt 585  Q
    ||  |||||||||||||||||    
T  24648348 catgattttgacaaccttgtt 24648368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 41688549 - 41688441
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  || |||||||||||| ||||||||||| ||||||| || |  |||||||||| ||| |||||| ||||||||||| || | |||||    
T  41688549 ttctacaaaagtccttaagtaaaatccttcgattttggttgcgattttaggagtcccgattttgctattccctttcgtcctaaagtaaagtcccgatttt 41688450  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  41688449 gacaacctt 41688441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 474 - 562
Target Start/End: Original strand, 19377849 - 19377937
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 562  Q
    |||||||||| |  ||||||||||||||| ||||||| |||| | ||||||||| ||||||||||| ||| ||||| || |||||||||    
T  19377849 ttctacaaaagtccttgagtaaaatccttcgattttgattgtaaatttacgattctcgattttgctattccctttccacttaaagtaaa 19377937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 19979858 - 19979922
Alignment:
Q  518 ttttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 582  Q
    ||||||||||||||||||||||||||||||| ||||| ||| |||||| | |||||||| |||||    
T  19979858 ttttacgattgtcgattttgctcttctcttttgacctgaagcaaaatcccgattttgaccacctt 19979922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 19042514 - 19042444
Alignment:
Q  234 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatc 303  Q
    |||||||||||| | ||||||||||||||| || ||||||   ||||||||||||||||||||||||||||    
T  19042514 ttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 490 - 584
Target Start/End: Original strand, 41427681 - 41427775
Alignment:
Q  490 gagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgt 584  Q
    ||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  || ||||||||   ||||||| |||| ||||||||||||||||    
T  41427681 gagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgactcgaagtaaagtctcgattttgacaaccttgt 41427775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 27340055 - 27339962
Alignment:
Q  489 tgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 582  Q
    |||||||||||||| ||||||| ||| ||||| |||||| ||||||||||| ||| ||||| || | ||||||| |  | ||||||||||||||    
T  27340055 tgagtaaaatccttcgattttgattgcgatttcacgattttcgattttgctattccctttcaacttgaagtaaagttccgattttgacaacctt 27339962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 43005742 - 43005634
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    ||||||||||  |||||||||||||| ||  |||||| ||| |||||||| ||| |||| ||| || ||  ||||||| |||||| |||||| | |||||    
T  43005742 ttctacaaaagaagttgagtaaaatctttcaattttgattgcgattttacaattttcgaattttctatttcctttcgatctaaagcaaaatcccgatttt 43005643  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  43005642 gacaacctt 43005634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 581
Target Start/End: Original strand, 18843961 - 18844068
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||| ||  ||||||| ||| |||||||||| |  |||||||||| ||| |||||||||| ||||||| |  | |||||    
T  18843961 ttctacaaaagtccttgagtaaaatactccgattttgattgcgattttacgagtcccgattttgctattccctttcgacctgaagtaaagttccgatttt 18844060  T
Q  574 gacaacct 581  Q
    ||||||||    
T  18844061 gacaacct 18844068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 583
Target Start/End: Complemental strand, 18051397 - 18051307
Alignment:
Q  493 taaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    |||||| ||||||||||| ||| |||| ||| | |  ||||||| || ||| ||||||||||||||||||||| | |||||||| ||||||    
T  18051397 taaaattctttgattttgattgcgattctacaagtcccgatttttctattccctttcgacctaaagtaaaatcccgattttgactaccttg 18051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 19042448 - 19042406
Alignment:
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaac 370  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  19042448 aaatctatcgattttgattgcgattttacgatttcttataaac 19042406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 21059040 - 21058978
Alignment:
Q  474 ttctacaaaattagttgagtaaaatccttt-gattttggttgtgattttacgattgtcgattt 535  Q
    |||||||||| ||||| |||||||  |||| ||||||||||| ||||||||||||||||||||    
T  21059040 ttctacaaaagtagttaagtaaaaatctttcgattttggttgcgattttacgattgtcgattt 21058978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 38158147 - 38158101
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattt 520  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||    
T  38158147 ttctacaaaaatagttgagtaaaatccttcgattttggttgcgattt 38158101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 527
Target Start/End: Original strand, 17624851 - 17624900
Alignment:
Q  478 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 527  Q
    |||||| ||||||||||||||| |||||||||| ||| ||||||||||||    
T  17624851 acaaaagtagttgagtaaaatcttttgattttgattgcgattttacgatt 17624900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 230 - 302
Target Start/End: Original strand, 24106641 - 24106714
Alignment:
Q  230 attattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaat 302  Q
    |||||||||||||||| || ||||||  ||||||  |||||||| ||||||||||||||  |||||||||||||    
T  24106641 attattgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcaccagcaacgactcaaat 24106714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 43235114 - 43235223
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| ||||||| || |   ||||||||| ||| |||||| |   ||||||| || |||||||    
T  43235114 ttctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtactgattttgctattccctttcgtctcgaagtaaagtcccaatttt 43235213  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  43235214 gacaaccttg 43235223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 15051980 - 15051872
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  ||  ||||||| | ||||||| || | |||||    
T  15051980 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccttttcgacttgaagtaaagtcccgatttt 15051881  T
Q  574 gacaacctt 582  Q
    || ||||||    
T  15051880 gataacctt 15051872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 21059085 - 21059045
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  21059085 aaaatccatcgattttgattgcgattttataatttcttata 21059045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 27340115 - 27340075
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  27340115 aaaatctatcgattttgattgcgattttaatatttcttata 27340075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 579
Target Start/End: Original strand, 30804216 - 30804279
Alignment:
Q  516 gattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaac 579  Q
    ||||||| |||| | ||||||| | ||||||||||||||  || ||||||||||||||||||||    
T  30804216 gattttatgattttggattttgttattctctttcgacctgtagcaaaatctcaattttgacaac 30804279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 20320928 - 20320990
Alignment:
Q  234 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacga 295  Q
    |||||||||||| | | ||||| ||||||| || |||||| ||||||||||||||||||||||    
T  20320928 ttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 522
Target Start/End: Complemental strand, 15905021 - 15904976
Alignment:
Q  477 tacaaaattagttgagtaaaatcctttgattttggttgtgatttta 522  Q
    |||||||||| |||||| |||||||||||| ||| |||||||||||    
T  15905021 tacaaaattaattgagtgaaatcctttgatcttgattgtgatttta 15904976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 406
Target Start/End: Original strand, 26021464 - 26021497
Alignment:
Q  373 agtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||| |||||||||||||    
T  26021464 agtcatttatgactatatacaatttataacatat 26021497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 18843916 - 18843944
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  18843916 aaaatccatcgattttgattgcgatttta 18843944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 19579144 - 19579172
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  19579144 aaaatccatcgattttgattgcgatttta 19579172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 20321144 - 20321172
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  20321144 aaaatccatcgattttgattgcgatttta 20321172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 20321189 - 20321297
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  || ||||||||||||  |||||| ||| ||||||| || |  ||||||| || |||  ||| ||||| ||||||| || |||||||    
T  20321189 ttctacaaaagtccttcagtaaaatccttcaattttgattgcgattttatgagtcccgattttactattcctttttgacctgaagtaaagtcccaatttt 20321288  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  20321289 gacaacctt 20321297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 579
Target Start/End: Original strand, 29270310 - 29270374
Alignment:
Q  515 tgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaac 579  Q
    ||||||||| ||| ||||||||| | |||||||| ||||| || ||||||| | |||||||||||    
T  29270310 tgattttactattttcgattttgatattctcttttgacctgaaataaaatcccgattttgacaac 29270374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 1e-55; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 5362093 - 5361915
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||| |||||||  |||||||| | |||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  5362093 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggca 5361994  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||| |||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  5361993 aaacccatcgattttgattgagattttacgatttcttataaactaagtcatttatgattatataccatttttaacatat 5361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 245 - 406
Target Start/End: Original strand, 9770128 - 9770289
Alignment:
Q  245 cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttga 344  Q
    ||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||| |||||||    
T  9770128 cgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaaaatctatcaattttga 9770227  T
Q  345 ttgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||||| |||||||||||||| |||| | |||||||||||||||||| |||||||||    
T  9770228 ttgcgattttacgatttcttataaactaagttacttatgactatataccattcataacatat 9770289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 235 - 406
Target Start/End: Original strand, 8889233 - 8889405
Alignment:
Q  235 tgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 333  Q
    ||||||||||| ||||||||| |||||||| ||||||||   | |||||||||| |||||||||||||| |||| |||||| | |||||||||||||| |    
T  8889233 tgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaataggcaaaattc 8889332  T
Q  334 atcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  8889333 atcgattttgattgcgattttacgatttcttataaaccaagtcgtttatgactatataccatttataatatat 8889405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 267 - 406
Target Start/End: Complemental strand, 9911502 - 9911363
Alignment:
Q  267 gattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttat 366  Q
    |||||| ||||||||||||||||||||| |  |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  9911502 gattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggcaaaatccatcgattttgattgcgattttacgatttcttat 9911403  T
Q  367 aaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9911402 aaactaagtcatttatgactatataccatttataacatat 9911363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 13023566 - 13023747
Alignment:
Q  229 cattattgtcaaaatccga-cttaaattctaaaa-tctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatac--aaaaatag 324  Q
    |||| |||||||||||| | ||||||| |||||| | ||||||||| | ||||||||||||||||| ||||||||||||||||||||| |  ||||||||    
T  13023566 cattgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaatag 13023665  T
Q  325 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
      |||||| |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  13023666 ataaaatcaatcgattttgattgcgattttacgattttttataaactaagtcatttatgactatataccatttataacatat 13023747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 36120823 - 36121001
Alignment:
Q  229 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||| |||| ||||||| |||||| ||||||||| | | |||||||||||||||||||| ||||||||| || ||| | |||||| |||    
T  36120823 cattgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagca 36120922  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  36120923 aaattcatcgattttgattgcgattttacgatttcttatatactaagtcatttatgactatataccatttataaaatat 36121001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 10142914 - 10143076
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    ||||||||||||||||||| ||  ||||| | ||||||| ||||||||| ||||||| ||||||||| ||| | ||||||| ||||||||||||||||||    
T  10142914 ccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagacaaaatccatcgattttg 10143013  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  10143014 attgtgattttacgatttcttataaatcaagtcatttatgactatataccaattataatatat 10143076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 17466083 - 17466256
Alignment:
Q  234 ttgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||| || ||||||||  |||||| ||||||||| | | |||||||| ||| || |||||||||||||| |||||| | |||||| ||||||||    
T  17466083 ttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaaatc 17466182  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    ||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  17466183 catcgatttagattgcgattttacgatttctaataaactaagtcatttatgactatataccatttataacatat 17466256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 5375668 - 5375841
Alignment:
Q  234 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| | | ||||||||||||| || |||||| | |||||||||||||||||||||| |||| |||| ||||||   ||||||| ||||||     
T  5375668 ttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaatt 5375767  T
Q  333 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  5375768 catcgactttgattgcgattttacgatttcttataaactaagtcatttatgaccatatatcatttataacatat 5375841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 229 - 382
Target Start/End: Complemental strand, 13551752 - 13551598
Alignment:
Q  229 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| ||||||||||| ||||||| || ||||||| ||||||||| | ||||| |||||||||||||||||||||||||| ||||||   ||||||| ||    
T  13551752 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 13551653  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttat 382  Q
    ||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  13551652 aaatccatcgattttaattgcgattttatgatttcttataaactaagtcatttat 13551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 23065077 - 23064913
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    |||||||||||||||||||| || |||||  |||||||||||| ||||||||||||||||||| ||||||| | ||||||||  |||||||||||||||     
T  23065077 ccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggtcaaatccatcgatttta 23064978  T
Q  344 attgcgattttaagatttcttataaac--caagtcatttatgactatataccatttataacatat 406  Q
    ||||| |||||| ||||||||||||||   ||||||||||||||  |||| ||||||||||||||    
T  23064977 attgcaattttacgatttcttataaactataagtcatttatgaccctatatcatttataacatat 23064913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 271 - 406
Target Start/End: Original strand, 37240300 - 37240434
Alignment:
Q  271 ttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaac 370  Q
    |||| ||||| ||||||||||||||||||||||||||||||||  ||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||     
T  37240300 ttacgacttttttcaccttcaacgactcaaatccatagtagaacccaaaa-taggcataattcatcgattttgattgcgattttacgatttcttataaat 37240398  T
Q  371 caagtcatttatgactatataccatttataacatat 406  Q
     ||||||||||||||| ||||||||||||| |||||    
T  37240399 taagtcatttatgactctataccatttatatcatat 37240434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 6346838 - 6346729
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||| ||| |  | |||||    
T  6346838 ttctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacgattttcgattttgctcttccctttcgacctgaagcaaatttccgatttt 6346739  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  6346738 gacaaccttg 6346729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 234 - 354
Target Start/End: Complemental strand, 8011341 - 8011220
Alignment:
Q  234 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| | || |||| |||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||  |||||||     
T  8011341 ttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaaaatt 8011242  T
Q  333 catcgattttgattgcgatttt 354  Q
    ||||||||||||||||||||||    
T  8011241 catcgattttgattgcgatttt 8011220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 474 - 584
Target Start/End: Complemental strand, 18459514 - 18459404
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||||||||| ||| |||||||| ||||||  ||| |||||||||||||||||||||||||||  ||||| |||| ||| |||||||| |||||    
T  18459514 ttctacaaaattagttaagtcaaatccttcgattttaattgcgattttacgattgtcgattttgctctttcctttcaacctgaagcaaaatctcgatttt 18459415  T
Q  574 gacaaccttgt 584  Q
    |||||||||||    
T  18459414 gacaaccttgt 18459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 8889463 - 8889571
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||||||||| |||||| ||||||||||| |||||||| |||||| ||||||||| ||||||||||||| ||| |||||| | |||||    
T  8889463 ttctacaaaagtagttgagtaagatccttcgattttggttgcgattttacaattgtcaattttgctc-tctctttcgacctgaagcaaaatcccgatttt 8889561  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  8889562 gacaaccttg 8889571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 37240485 - 37240593
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaa-tctcaattt 572  Q
    |||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||| ||| ||| |||| ||| |||||    
T  37240485 ttctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgatttagctcttctctttcgtcctgaagcaaaactct-aattt 37240583  T
Q  573 tgacaacctt 582  Q
    ||||||||||    
T  37240584 tgacaacctt 37240593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 474 - 567
Target Start/End: Complemental strand, 5361848 - 5361755
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctc 567  Q
    |||||||||| ||||||||||||| |||| ||||||| |||  |||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  5361848 ttctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacgattgtctattttgctcttctctttcgacctgaaataaaatctc 5361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 234 - 333
Target Start/End: Original strand, 7044731 - 7044831
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| ||||||||| |||||||| | |||||| ||||||| ||||||||||||||||||||||||||| ||||| | |||||| ||||||||    
T  7044731 ttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaataagcaaaatc 7044830  T
Q  333 c 333  Q
    |    
T  7044831 c 7044831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 486 - 585
Target Start/End: Original strand, 7045202 - 7045301
Alignment:
Q  486 agttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgtt 585  Q
    ||||||||||||||||| ||||||| ||| ||||||| |||| | ||||||||||||| |||||||||| |||||||||  | |||||||||||||||||    
T  7045202 agttgagtaaaatccttcgattttgattgcgattttatgatttttgattttgctcttccctttcgacctgaagtaaaattcctattttgacaaccttgtt 7045301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 474 - 572
Target Start/End: Complemental strand, 5943142 - 5943044
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 572  Q
    |||||||||| ||||||||||||||||||  |||||  ||| |||||||||||| | ||||||||||||| ||||||||||||| ||||||||| ||||    
T  5943142 ttctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacgatttttgattttgctcttccctttcgacctaaaataaaatctcgattt 5943044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 467 - 583
Target Start/End: Original strand, 7452745 - 7452860
Alignment:
Q  467 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 566  Q
    |||||| |||||||||| |||||||||||| ||||| ||||||| ||| |||||||||||| || | ||| |||||| |||||||||| ||| ||||||     
T  7452745 atattgattctacaaaagtagttgagtaaa-tccttcgattttgattgcgattttacgattttcaacttttctcttccctttcgacctgaagcaaaatcc 7452843  T
Q  567 caattttgacaaccttg 583  Q
     ||||||||||||||||    
T  7452844 taattttgacaaccttg 7452860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 9770372 - 9770467
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||||||||||| ||||||| ||| |||||||||| |  |||||||||| ||| |||||||||||||||||| || | |||||||||||||||    
T  9770372 ttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgacctaaagtaaagtcccgattttgacaaccttg 9770467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 6347194 - 6347114
Alignment:
Q  229 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 308  Q
    ||||||||||||||| || |||||||| |||||||| |||||||| ||||||| || ||||||||||||||||||||||||    
T  6347194 cattattgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatag 6347114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 244 - 333
Target Start/End: Original strand, 7452435 - 7452523
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 333  Q
    |||||||||||||||||||| || ||||| ||||||| ||||||||||||||||| |||||||||| || | | || |||||||||||||    
T  7452435 ccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgactc-aatccatagtggattcctaatataggcaaaatcc 7452523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 10394856 - 10394965
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||| ||||| ||||||| ||| |||||||||||| | ||||||||||||   |||| || | ||| |||||  |||||||    
T  10394856 ttctacaaaagtagttgagtaaagtccttcgattttgattgcgattttacgatttttgattttgctctttcttttcaacttgaagcaaaattccaatttt 10394955  T
Q  574 gacaaccttg 583  Q
    ||||||||||    
T  10394956 gacaaccttg 10394965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 4156767 - 4156866
Alignment:
Q  234 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 332  Q
    |||||||||||| |||||||||  |||||| ||||||||||  ||||| |||||||| |||||||||||||  ||||||||| | |||||| ||||||||    
T  4156767 ttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaataagcaaaatc 4156866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 575
Target Start/End: Original strand, 4157273 - 4157377
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttac---gattgtcgattttgctcttctctttcgacctaaagtaaaatctcaat 570  Q
    |||||||||| ||||||||||||||| || ||| ||| ||| ||||||||   |||| ||||||||||||||| |||||||| ||||| |||||| | ||    
T  4157273 ttctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcccgat 4157372  T
Q  571 tttga 575  Q
    |||||    
T  4157373 tttga 4157377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 575
Target Start/End: Original strand, 4157560 - 4157664
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttac---gattgtcgattttgctcttctctttcgacctaaagtaaaatctcaat 570  Q
    |||||||||| ||||||||||||||| || ||| ||| ||| ||||||||   |||| ||||||||||||||| |||||||| ||||| |||||| | ||    
T  4157560 ttctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcccgat 4157659  T
Q  571 tttga 575  Q
    |||||    
T  4157660 tttga 4157664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 580
Target Start/End: Original strand, 10143146 - 10143250
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||||||||||| |||||||||| ||||||| ||| ||||||||||||||  ||||||||  ||||||| ||  | ||| ||||||||||||||    
T  10143146 ttctacaaaattagttgaataaaatccttcgattttgattgcgattttacgattgttaattttgct-atctcttttgatttgaag-aaaatctcaatttt 10143243  T
Q  574 gacaacc 580  Q
    || ||||    
T  10143244 gataacc 10143250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 314
Target Start/End: Original strand, 24719516 - 24719602
Alignment:
Q  229 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 314  Q
    |||| ||||||||||| |||||||| |||||||||  | |||||| | ||||| ||||||||||||||||||||||||||| |||||    
T  24719516 cattgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaat 24719602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 18459822 - 18459733
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 333  Q
    |||||| |||| |||||||| | |||||| | ||| | ||||| ||||||||||||||||||||| ||||| | ||||||||||||||||    
T  18459822 ccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggcaaaatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 478 - 582
Target Start/End: Original strand, 17466329 - 17466433
Alignment:
Q  478 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgaca 577  Q
    |||||| |||||||||| |||| ||  |||||| |||  ||||||||||||||||||||||||  |||||||||| | ||| |||||  || ||||||||    
T  17466329 acaaaagtagttgagtataatctttcaattttgtttgcaattttacgattgtcgattttgctcagctctttcgacttgaagcaaaatgccagttttgaca 17466428  T
Q  578 acctt 582  Q
    |||||    
T  17466429 acctt 17466433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 529 - 583
Target Start/End: Original strand, 24719869 - 24719923
Alignment:
Q  529 tcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||||||||||||||    
T  24719869 tcgattttgctcttccctttcgacctgaagcaaaatctcgattttgacaaccttg 24719923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 5375925 - 5376020
Alignment:
Q  488 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 583  Q
    ||||||||||||||| ||||||| ||| |||||||||| |  ||||||| || ||   ||| ||||| ||||||| || |||||||||||||||||    
T  5375925 ttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttactatttatttttgacctgaagtaaagtcccaattttgacaaccttg 5376020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 577
Target Start/End: Complemental strand, 9149605 - 9149502
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||| ||| ||||||||||||||||||  |||||| |||  ||||||| ||| | ||||| ||||||  |||||||||||||| ||||| |  |||||    
T  9149605 ttctacgaaagtagttgagtaaaatccttcaattttgattggaattttacaattttagatttcgctctttcctttcgacctaaagcaaaatattgatttt 9149506  T
Q  574 gaca 577  Q
    ||||    
T  9149505 gaca 9149502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 7815559 - 7815661
Alignment:
Q  232 tattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaa 330  Q
    |||||| ||||||| ||||||||| |||||||  || |||||   ||||| |||| ||| | ||||||||| |||||||||||| | |||||||||||||    
T  7815559 tattgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaa 7815658  T
Q  331 tcc 333  Q
    |||    
T  7815659 tcc 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 4157053 - 4157090
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttctt 364  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  4157053 aaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 539
Target Start/End: Complemental strand, 8011019 - 8010954
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgct 539  Q
    ||||| |||| |||||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||    
T  8011019 ttctataaaaatagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgct 8010954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 522
Target Start/End: Complemental strand, 11321022 - 11320974
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgatttta 522  Q
    |||| |||||| | |||||||||||||||| ||||||||||||||||||    
T  11321022 ttcttcaaaatcaattgagtaaaatccttttattttggttgtgatttta 11320974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 573
Target Start/End: Original strand, 13023807 - 13023903
Alignment:
Q  477 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||  ||| |||||||| ||  || ||| |||||||||||||| |  |||||||||| |||||||||||| | ||||||| || |||||||    
T  13023807 tacaaaattccttgggtaaaatcattctatcttgattgtgattttacgagttccgattttgctattctctttcgacttgaagtaaagtcccaatttt 13023903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 46664228 - 46664152
Alignment:
Q  503 tgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaac 579  Q
    |||||||| ||| |||||| ||||| ||||||||||| ||   ||||||||| ||| |||||| |||||||||||||    
T  46664228 tgattttgattgcgattttccgattttcgattttgctatttcttttcgacctgaagcaaaatcccaattttgacaac 46664152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 367
Target Start/End: Complemental strand, 6346882 - 6346843
Alignment:
Q  328 aaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  6346882 aaatccatcgattttgattgcgattttacaatttcttata 6346843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 581
Target Start/End: Complemental strand, 23064844 - 23064737
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  |||| ||||||||||  |||||| ||| |||||||||| |  |||||| | | ||| |||||||||| ||||||| || | |||||    
T  23064844 ttctacaaaagtccttgaataaaatccttcaattttgattgcgattttacgagttccgatttcgttattccctttcgacctgaagtaaagtcccgatttt 23064745  T
Q  574 gacaacct 581  Q
    ||||||||    
T  23064744 gacaacct 23064737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 367
Target Start/End: Original strand, 24719782 - 24719816
Alignment:
Q  333 catcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||||||||||| |||||||||||    
T  24719782 catcgattttgattgcgattttacgatttcttata 24719816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 508
Target Start/End: Complemental strand, 5884170 - 5884129
Alignment:
Q  467 atattggttctacaaaattagttgagtaaaatcctttgattt 508  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  5884170 atattgattctacaaaaatagttgagtaaaatccttcgattt 5884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 55476234 - 55476343
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  |||||||  |  || |||||||| | ||||||| || | |||||    
T  55476234 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtaccgattttattactccctttcgacttgaagtaaagtcccgatttt 55476333  T
Q  574 gacaaccttg 583  Q
    || |||||||    
T  55476334 gataaccttg 55476343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 7044964 - 7045004
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||  |||||| |||||||||||    
T  7044964 aaaatccatcgattttgattgatattttacgatttcttata 7045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 8011064 - 8011024
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||| |||||||||||||||||||||||  ||||||||||    
T  8011064 aaaatacatcgattttgattgcgattttacaatttcttata 8011024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 9911335 - 9911299
Alignment:
Q  331 tccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||||||  ||||||||||    
T  9911335 tccatcgattttgattgcgattttacaatttcttata 9911299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 17466280 - 17466320
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    |||||||||||||||||||||| ||||||  ||||||||||    
T  17466280 aaaatccatcgattttgattgcaattttacaatttcttata 17466320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 36121024 - 36121052
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  36121024 aaaatccatcgattttgattgcgatttta 36121052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 103; Significance: 6e-51; HSPs: 3)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 8442 - 8620
Alignment:
Q  229 cattattgtcaaaatccg-acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| ||||||||||||  |||||||| |||||||| | |||||| | |||||||||||||||||||||| ||||| || ||||||| | |||||| |||    
T  8442 cattgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataagca 8541  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  8542 aaatccattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataccatat 8620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 583
Target Start/End: Original strand, 8687 - 8796
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||| ||| || |||||||||||||||  |||||| ||| |||||||||| |  |||||||| | ||| |||||||||| ||||||| || | |||||    
T  8687 ttctacgaaaatacttgagtaaaatccttcaattttgattgcgattttacgagttccgattttgttattccctttcgacctgaagtaaagtcccgatttt 8786  T
Q  574 gacaaccttg 583  Q
    || |||||||    
T  8787 gagaaccttg 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 8642 - 8670
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  8642 aaaatccatcgattttgattgcgatttta 8670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 7569 - 7407
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 343  Q
    |||||||||||||||||||  |||||||| | |||||||| |||||||||||   |||||||||||||||| | |||||||||||||| ||||||||||     
T  7569 ccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaataggcaaaattcatcgatttta 7470  T
Q  344 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 406  Q
    |||||||||||| |||||||||||||| |||| |||||||| ||||||||| ||| |||||||    
T  7469 attgcgattttacgatttcttataaacgaagtaatttatgaatatataccaattagaacatat 7407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 93834 - 93657
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| ||||||||| |||||||| || |||||   | |||||||||| ||||| |||||||||||||| ||||| | |||||||||     
T  93834 cattgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcg 93737  T
Q  328 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgact-atataccatttataacatat 406  Q
    |||||||||||||||||||||||||||| |||||||| ||||  ||||| ||||||||| |||||| ||| |||||||||    
T  93736 aaatccatcgattttgattgcgattttacgatttcttttaaattaagtcgtttatgactaatatacgattcataacatat 93657  T

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Target: scaffold0042; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 578
Target Start/End: Complemental strand, 93588 - 93483
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt-gtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 572  Q
    |||||||||| ||||||| |||||||||| ||||||| ||  |||||||| ||| ||||||||||||||| |||||  |||| ||| |||| |  |||||    
T  93588 ttctacaaaagtagttgaataaaatccttcgattttgattacgattttacaatttgtcgattttgctcttttcttttaacctgaagcaaaaccctaattt 93489  T
Q  573 tgacaa 578  Q
    ||||||    
T  93488 tgacaa 93483  T

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Target: scaffold0042; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 93633 - 93593
Alignment:
Q  327 aaaatccatcgattttgattgcgattttaagatttcttata 367  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  93633 aaaatccatcgattttgattgcgattttacgatttattata 93593  T

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Target: scaffold0510 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 367
Target Start/End: Complemental strand, 215 - 91
Alignment:
Q  244 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc-aaaatccatcgatttt 342  Q
    ||||||||||| |||||||  |||||||| | ||||||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  215 ccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcgaaaatccatcgatttt 116  T
Q  343 gattgcgattttaagatttcttata 367  Q
    ||||| |||||||  ||||||||||    
T  115 gattgagattttacaatttcttata 91  T

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Target: scaffold0510; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 485 - 554
Target Start/End: Complemental strand, 76 - 7
Alignment:
Q  485 tagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 554  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  76 tagttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgctcttctcattcgacct 7  T

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Target: scaffold0028 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 145834 - 145942
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||  |||||||||||||| ||||||| |||  ||||||||||| |||||||  || || ||||||||||| ||| ||||||||||||||    
T  145834 ttctacaaaagtaagtgagtaaaatccttcgattttgattgctattttacgattttcgatttaactattttctttcgacctgaagcaaaatctcaatttt 145933  T
Q  574 gacaacctt 582  Q
    |||||||||    
T  145934 gacaacctt 145942  T

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Target: scaffold0016 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 474 - 586
Target Start/End: Complemental strand, 56308 - 56196
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgat-tgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 572  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| ||||||| ||| | ||||||||||| ||| |||||||||| ||||||| |||| ||||    
T  56308 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgatttta-gatgtctcgattttgctattccctttcgacctgaagtaaagtctcgattt 56210  T
Q  573 tgacaaccttgttc 586  Q
    ||||||||||||||    
T  56209 tgacaaccttgttc 56196  T

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Target: scaffold0016; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 58790 - 58736
Alignment:
Q  350 attttaagatttcttataaaccaagtcatttatgactatataccatttataacat 404  Q
    |||||| |||||||||||||| || |||||||||||||||||||| |||||||||    
T  58790 attttacgatttcttataaactaaatcatttatgactatataccacttataacat 58736  T

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Target: scaffold0016; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 56353 - 56325
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  56353 aaaatccatcgattttgattgcgatttta 56325  T

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Target: scaffold0048 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 48903 - 48839
Alignment:
Q  243 tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccata 307  Q
    |||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  48903 tccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccata 48839  T

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Target: scaffold0048; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 61197 - 61089
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| ||||| |||||||| ||| ||||||| |||||||||||||||| |  ||||| || |||||||| ||||| ||| |||||| | |||||    
T  61197 ttctacaaaagtagttaagtaaaattcttcgattttgattgtgattttacgattttaaattttacttttctcttttgacctgaagcaaaatcccgatttt 61098  T
Q  574 gacaacctt 582  Q
    | |||||||    
T  61097 ggcaacctt 61089  T

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Target: scaffold0048; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 522
Target Start/End: Complemental strand, 48545 - 48497
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgatttta 522  Q
    |||||||||| ||||| |||||||||||| ||||||| ||| |||||||    
T  48545 ttctacaaaagtagttaagtaaaatccttcgattttgattgagatttta 48497  T

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Target: scaffold0603 (Bit Score: 46; Significance: 6e-17; HSPs: 3)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 474 - 575
Target Start/End: Complemental strand, 8842 - 8741
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 573  Q
    |||||||||| |||||||||||||||||| ||||||| ||  ||||||| |||| ||||||||||||| |  |||| |||||||| |||||| | |||||    
T  8842 ttctacaaaagtagttgagtaaaatccttcgattttgattacgattttatgattttcgattttgctctaccttttcaacctaaagcaaaatcccgatttt 8743  T
Q  574 ga 575  Q
    ||    
T  8742 ga 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 329
Target Start/End: Complemental strand, 9150 - 9049
Alignment:
Q  229 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||||| || ||||||| |||||| |||||||||   | ||| ||||||||||||||||||||||||||| | ||| |  |||||||||    
T  9150 cattgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatagcaaaatccttaaataggca 9051  T
Q  328 aa 329  Q
    ||    
T  9050 aa 9049  T

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Target: scaffold0603; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 8887 - 8859
Alignment:
Q  327 aaaatccatcgattttgattgcgatttta 355  Q
    |||||||||||||||||||||||||||||    
T  8887 aaaatccatcgattttgattgcgatttta 8859  T

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Target: scaffold0534 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 473 - 565
Target Start/End: Original strand, 915 - 1007
Alignment:
Q  473 gttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatc 565  Q
    ||||||||||| |||||||||||||| ||| ||||||| |||  ||||||||||| || |||||||||||| |||| ||||| ||| ||||||    
T  915 gttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttcccttttgacctgaagcaaaatc 1007  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 37296 - 37191
Alignment:
Q  229 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 327  Q
    |||| |||||||||| |||||||||||| ||||||  || ||||| ||| ||| |||||||||||| |||||||||||||| |||||   |||||||| |    
T  37296 cattgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggta 37197  T
Q  328 aaatcc 333  Q
    ||||||    
T  37196 aaatcc 37191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 315
Target Start/End: Complemental strand, 35184 - 35102
Alignment:
Q  234 ttgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaata 315  Q
    ||||||||||| ||||||||||||||||||  |  |||||  |||||| |||||||| |||||||||||| ||| ||||||||    
T  35184 ttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaata 35102  T

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Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 33184 - 33299
Alignment:
Q  474 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttg-------ctcttctctttcgacctaaagtaaaatct 566  Q
    |||||||||| ||  |||||||||| ||| ||||||| ||| |||||||| ||| ||||||||        || || ||||||||||| ||| |||||||    
T  33184 ttctacaaaagtaagtgagtaaaattcttcgattttgattgcgattttacaattttcgattttcgatttaactattttctttcgacctgaagcaaaatct 33283  T
Q  567 caattttgacaacctt 582  Q
    ||||||||||||||||    
T  33284 caattttgacaacctt 33299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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