View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0681_low_22 (Length: 263)

Name: NF0681_low_22
Description: NF0681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0681_low_22
NF0681_low_22
[»] chr3 (21 HSPs)
chr3 (21-263)||(344562-344802)
chr3 (227-263)||(48532210-48532246)
chr3 (228-263)||(49503563-49503598)
chr3 (229-263)||(2133608-2133642)
chr3 (229-263)||(35701101-35701135)
chr3 (230-263)||(311306-311339)
chr3 (230-263)||(829154-829187)
chr3 (230-263)||(5169084-5169117)
chr3 (230-263)||(12096702-12096735)
chr3 (230-263)||(45374474-45374507)
chr3 (230-263)||(45834597-45834630)
chr3 (230-263)||(47555329-47555362)
chr3 (230-263)||(48508487-48508520)
chr3 (228-261)||(51447712-51447745)
chr3 (230-263)||(53262393-53262426)
chr3 (227-263)||(3842727-3842763)
chr3 (231-263)||(23610930-23610962)
chr3 (231-263)||(43529298-43529330)
chr3 (235-263)||(44102958-44102986)
chr3 (231-263)||(48259956-48259988)
chr3 (231-263)||(52139052-52139084)
[»] chr4 (26 HSPs)
chr4 (228-263)||(46582821-46582856)
chr4 (227-263)||(39100530-39100566)
chr4 (228-263)||(12494915-12494950)
chr4 (228-263)||(26772532-26772567)
chr4 (228-263)||(52569510-52569545)
chr4 (229-263)||(436481-436515)
chr4 (230-263)||(6957850-6957883)
chr4 (230-263)||(8286691-8286724)
chr4 (230-263)||(8327153-8327186)
chr4 (230-263)||(19154860-19154893)
chr4 (230-263)||(21528540-21528573)
chr4 (230-263)||(30634103-30634136)
chr4 (230-263)||(31961263-31961296)
chr4 (230-263)||(32339811-32339844)
chr4 (230-263)||(37488343-37488376)
chr4 (230-263)||(43434176-43434209)
chr4 (230-263)||(45204837-45204870)
chr4 (230-263)||(45209202-45209235)
chr4 (230-263)||(46153960-46153993)
chr4 (230-263)||(48174090-48174123)
chr4 (230-263)||(49454476-49454509)
chr4 (230-263)||(50238612-50238645)
chr4 (230-263)||(50238698-50238731)
chr4 (230-263)||(50869877-50869910)
chr4 (230-263)||(55007998-55008031)
chr4 (230-263)||(56130422-56130455)
[»] chr1 (23 HSPs)
chr1 (228-263)||(48431394-48431429)
chr1 (230-263)||(8672170-8672203)
chr1 (230-263)||(51584996-51585029)
chr1 (229-263)||(4707217-4707251)
chr1 (233-263)||(12231610-12231640)
chr1 (229-263)||(41560481-41560515)
chr1 (229-263)||(44751736-44751770)
chr1 (230-263)||(1210997-1211030)
chr1 (230-263)||(2914120-2914153)
chr1 (230-263)||(8809498-8809531)
chr1 (230-263)||(15086174-15086207)
chr1 (230-263)||(25979228-25979261)
chr1 (230-263)||(30202127-30202160)
chr1 (230-263)||(34444608-34444641)
chr1 (230-263)||(38758017-38758050)
chr1 (230-263)||(38807668-38807701)
chr1 (230-263)||(43481795-43481828)
chr1 (230-263)||(51602308-51602341)
chr1 (231-263)||(696522-696554)
chr1 (231-263)||(3777258-3777290)
chr1 (231-263)||(29577504-29577536)
chr1 (226-262)||(43036106-43036142)
chr1 (231-263)||(44941774-44941806)
[»] chr8 (20 HSPs)
chr8 (229-263)||(15215408-15215442)
chr8 (228-263)||(2027782-2027817)
chr8 (228-263)||(11523718-11523753)
chr8 (229-263)||(36545401-36545435)
chr8 (230-260)||(38482729-38482759)
chr8 (230-263)||(1064972-1065005)
chr8 (230-263)||(7531641-7531674)
chr8 (230-263)||(14742079-14742112)
chr8 (230-263)||(24837943-24837976)
chr8 (230-263)||(30198263-30198296)
chr8 (230-263)||(31716074-31716107)
chr8 (230-263)||(32978126-32978159)
chr8 (230-263)||(41031417-41031450)
chr8 (230-263)||(41031523-41031556)
chr8 (230-263)||(44047529-44047562)
chr8 (231-263)||(1928585-1928617)
chr8 (231-263)||(10668495-10668527)
chr8 (231-263)||(16918494-16918526)
chr8 (231-263)||(35324025-35324057)
chr8 (231-263)||(39651026-39651058)
[»] chr2 (29 HSPs)
chr2 (230-263)||(3866324-3866357)
chr2 (227-263)||(1648116-1648152)
chr2 (227-263)||(14444921-14444957)
chr2 (228-263)||(25834930-25834965)
chr2 (228-263)||(37520698-37520733)
chr2 (229-263)||(7326156-7326190)
chr2 (233-263)||(11412962-11412992)
chr2 (229-263)||(12489798-12489832)
chr2 (233-263)||(31959773-31959803)
chr2 (233-263)||(36183703-36183733)
chr2 (229-263)||(38429661-38429695)
chr2 (229-263)||(42543487-42543521)
chr2 (230-263)||(227441-227474)
chr2 (230-263)||(3635320-3635353)
chr2 (230-263)||(4807847-4807880)
chr2 (230-263)||(9531597-9531630)
chr2 (230-263)||(12734952-12734985)
chr2 (230-263)||(12882042-12882075)
chr2 (230-263)||(13188394-13188427)
chr2 (230-263)||(15025746-15025779)
chr2 (230-263)||(17670720-17670753)
chr2 (230-263)||(30306284-30306317)
chr2 (230-263)||(35643200-35643233)
chr2 (230-263)||(38328367-38328400)
chr2 (230-263)||(43573127-43573160)
chr2 (230-263)||(44437718-44437751)
chr2 (231-263)||(10403891-10403923)
chr2 (231-263)||(12520060-12520092)
chr2 (229-261)||(14520946-14520978)
[»] chr7 (29 HSPs)
chr7 (227-263)||(33281138-33281174)
chr7 (228-263)||(2885717-2885752)
chr7 (228-263)||(11594212-11594247)
chr7 (227-262)||(29312242-29312277)
chr7 (227-262)||(29318789-29318824)
chr7 (228-263)||(36101772-36101807)
chr7 (225-263)||(24177619-24177657)
chr7 (230-263)||(12841272-12841305)
chr7 (230-263)||(12966268-12966301)
chr7 (230-263)||(14594004-14594037)
chr7 (230-263)||(16013527-16013560)
chr7 (230-263)||(20899423-20899456)
chr7 (230-263)||(28208325-28208358)
chr7 (230-263)||(29650636-29650669)
chr7 (230-263)||(31005457-31005490)
chr7 (230-263)||(31682599-31682632)
chr7 (230-263)||(32631816-32631849)
chr7 (230-263)||(35725568-35725601)
chr7 (230-263)||(38900208-38900241)
chr7 (230-263)||(39906369-39906402)
chr7 (230-263)||(43423988-43424021)
chr7 (230-263)||(43491560-43491593)
chr7 (230-263)||(44855171-44855204)
chr7 (230-263)||(47413712-47413745)
chr7 (231-263)||(25891140-25891172)
chr7 (231-263)||(28355418-28355450)
chr7 (230-262)||(30199964-30199996)
chr7 (231-263)||(31840482-31840514)
chr7 (231-263)||(37618197-37618229)
[»] scaffold0157 (1 HSPs)
scaffold0157 (228-263)||(25527-25562)
[»] chr6 (2 HSPs)
chr6 (228-263)||(12890827-12890862)
chr6 (230-263)||(28085628-28085661)
[»] chr5 (13 HSPs)
chr5 (228-263)||(13606992-13607027)
chr5 (228-263)||(28411928-28411963)
chr5 (228-263)||(42576262-42576297)
chr5 (229-263)||(29816634-29816668)
chr5 (230-263)||(4496636-4496669)
chr5 (230-263)||(12492381-12492414)
chr5 (230-263)||(14665964-14665997)
chr5 (230-263)||(20367145-20367178)
chr5 (228-261)||(22703890-22703923)
chr5 (230-263)||(28976856-28976889)
chr5 (230-263)||(29929306-29929339)
chr5 (231-263)||(408492-408524)
chr5 (231-263)||(11675782-11675814)
[»] scaffold0113 (1 HSPs)
scaffold0113 (225-263)||(11541-11579)
[»] scaffold0168 (1 HSPs)
scaffold0168 (230-263)||(28886-28919)
[»] scaffold0018 (1 HSPs)
scaffold0018 (230-263)||(31720-31753)


Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 263
Target Start/End: Original strand, 344562 - 344802
Alignment:
Q  21 acatcatcaaaatttagtcttaaaatgtatagctgggaaaaagagtcagacagtttgagacctgaggaaccaaaatccatacaaaatagagtgaccaaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  344562 acatcatcaaaatttagtcttaaaatgtatagctgggaaaaagagtcagacagtttgagacctgaggaaccaaattccatacaaaatagagtgaccaaaa 344661  T
Q  121 tagcatttaaacctttaattaaaatcctaaaagggaacacaagagaggttactaaaaaattagggccggtttggaagggttttttaggagggctaggtcc 220  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  344662 tagcatttaaacctttaattaaaatcctaaaagggaacac--gagaggttactaaaaaattagggccggtctggaagggttttttaggagggctaggtcc 344759  T
Q  221 atttaatatacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  344760 atttaatatacaacaacaacaaccaagccttatcctactaagt 344802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 48532246 - 48532210
Alignment:
Q  227 tatacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||| |||||||    
T  48532246 tatacaacaacaacaaccaagccttatcccactaagt 48532210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 49503563 - 49503598
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  49503563 atacaacaacaacaaccaagccttatcccactaagt 49503598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 2133608 - 2133642
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  2133608 tacaacaacaacaaccaagccttatcccactaagt 2133642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 35701135 - 35701101
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  35701135 tacaacaacaacaaccaagccttatcccactaagt 35701101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 311306 - 311339
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  311306 acaacaacaacaaccaagccttatcccactaagt 311339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 829187 - 829154
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  829187 acaacaacaacaaccaagccttatccaactaagt 829154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 5169117 - 5169084
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  5169117 acaacaacaacaaccaagccttatcccactaagt 5169084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 12096702 - 12096735
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  12096702 acaacaacaacaaccaagccttatcccactaagt 12096735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 45374474 - 45374507
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  45374474 acaacaacaacaaccaagccttatcccactaagt 45374507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 45834597 - 45834630
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  45834597 acaacaacaacaaccaagccttatcccactaagt 45834630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 47555329 - 47555362
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  47555329 acaacaacaacaaccaagccttatcccactaagt 47555362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 48508520 - 48508487
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  48508520 acaacaacaacaaccaagccttatcccactaagt 48508487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 51447712 - 51447745
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaa 261  Q
    |||||||||||||||||||||||||||| |||||    
T  51447712 atacaacaacaacaaccaagccttatcccactaa 51447745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 53262426 - 53262393
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  53262426 acaacaacaacaaccaagccttatcccactaagt 53262393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 3842763 - 3842727
Alignment:
Q  227 tatacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  3842763 tatacaacaacagcaaacaagccttatcctactaagt 3842727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 23610930 - 23610962
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  23610930 caacaacaacaaccaagccttatcccactaagt 23610962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 43529330 - 43529298
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  43529330 caacaacaacaaccaagccttatcccactaagt 43529298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 263
Target Start/End: Original strand, 44102958 - 44102986
Alignment:
Q  235 aacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||||    
T  44102958 aacaacaaccaagccttatcctactaagt 44102986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 48259988 - 48259956
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  48259988 caacaacaacaaccaagccttatcccactaagt 48259956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 52139084 - 52139052
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  52139084 caacaacaacaaccaagccttatcccactaagt 52139052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 46582821 - 46582856
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||||||||||    
T  46582821 atacaacaacaacaaccaagccttatcctactaagt 46582856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 39100530 - 39100566
Alignment:
Q  227 tatacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||| |||||||    
T  39100530 tatacaacaacaacaaccaagccttatcccactaagt 39100566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 12494950 - 12494915
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  12494950 atacaacaacaacaaccaagccttatcccactaagt 12494915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 26772532 - 26772567
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  26772532 atacaacaacaacaaccaagccttatcccactaagt 26772567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 52569510 - 52569545
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  52569510 atacaacaacaacaaccaagccttatcccactaagt 52569545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 436515 - 436481
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  436515 tacaacaacaacaaccaagccttatcccactaagt 436481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 6957883 - 6957850
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  6957883 acaacaacaacaaccaagccttatcccactaagt 6957850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 8286724 - 8286691
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  8286724 acaacaacaacaaccaagccttatcccactaagt 8286691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 8327186 - 8327153
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  8327186 acaacaacaacaaccaagccttatcccactaagt 8327153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 19154860 - 19154893
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  19154860 acaacaacaacaaccaagccttatcccactaagt 19154893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 21528573 - 21528540
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  21528573 acaacaacaacaaccaagccttatcccactaagt 21528540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 30634103 - 30634136
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  30634103 acaacaacaacaaccaagccttatcccactaagt 30634136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 31961263 - 31961296
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  31961263 acaacaacaacaaccaagccttatcccactaagt 31961296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 32339844 - 32339811
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  32339844 acaacaacaacaaccaagccttatcccactaagt 32339811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 37488376 - 37488343
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  37488376 acaacaacaacaaccaagccttatcccactaagt 37488343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 43434209 - 43434176
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  43434209 acaacaacaacaaccaagccttatcccactaagt 43434176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 45204837 - 45204870
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  45204837 acaacaacaacaaccaagccttatcccactaagt 45204870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 45209202 - 45209235
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  45209202 acaacaacaacaaccaagccttatcccactaagt 45209235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 46153993 - 46153960
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  46153993 acaacaacaacaaccaagccttatcccactaagt 46153960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 48174090 - 48174123
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  48174090 acaacaacaacaaccaagccttatcccactaagt 48174123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 49454476 - 49454509
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  49454476 acaacaacaacaaccaagccttatcccactaagt 49454509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 50238612 - 50238645
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  50238612 acaacaacaacaaccaagccttatcccactaagt 50238645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 50238698 - 50238731
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  50238698 acaacaacaacaaccaagccttatcccactaagt 50238731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 50869877 - 50869910
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  50869877 acaacaacaacaaccaagccttatcccactaagt 50869910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 55008031 - 55007998
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  55008031 acaacaacaacaaccaagccttatcccactaagt 55007998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 56130455 - 56130422
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  56130455 acaacaacaacaaccaagccttatcccactaagt 56130422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 48431394 - 48431429
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||||||||||    
T  48431394 atacaacaacaacaaccaagccttatcctactaagt 48431429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 8672203 - 8672170
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||||||||    
T  8672203 acaacaacaacaaccaagccttatcctactaagt 8672170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 51585029 - 51584996
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||||||||    
T  51585029 acaacaacaacaaccaagccttatcctactaagt 51584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 4707217 - 4707251
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  4707217 tacaacaacaacaaccaagccttatcccactaagt 4707251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 12231640 - 12231610
Alignment:
Q  233 acaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||||||    
T  12231640 acaacaacaaccaagccttatcctactaagt 12231610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 41560515 - 41560481
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  41560515 tacaacaacaacaaccaagccttatcccactaagt 41560481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 44751770 - 44751736
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  44751770 tacaacaacaacaaccaagccttatcccactaagt 44751736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 1211030 - 1210997
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  1211030 acaacaacaacaaccaagccttatcccactaagt 1210997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 2914120 - 2914153
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  2914120 acaacaacaacaaccaagccttatcccactaagt 2914153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 8809498 - 8809531
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  8809498 acaacaacaacaaccaagccttatcccactaagt 8809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 15086207 - 15086174
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  15086207 acaacaacaacaaccaagccttatcccactaagt 15086174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 25979228 - 25979261
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  25979228 acaacaacaacaaccaagccttatcccactaagt 25979261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 30202127 - 30202160
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  30202127 acaacaacaacaaccaagccttatcccactaagt 30202160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 34444641 - 34444608
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  34444641 acaacaacaacaaccaagccttatcccactaagt 34444608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 38758017 - 38758050
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  38758017 acaacaacaacaaccaagccttatcccactaagt 38758050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 38807668 - 38807701
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  38807668 acaacaacaacaaccaagccttatcccactaagt 38807701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 43481795 - 43481828
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  43481795 acaacaacaacaaccaagccttatcccactaagt 43481828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 51602341 - 51602308
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  51602341 acaacaacaacaaccaagccttatcccactaagt 51602308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 696554 - 696522
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  696554 caacaacaacaaccaagccttatcccactaagt 696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 3777258 - 3777290
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||| ||||||||||||||    
T  3777258 caacaacaacaaccaagcattatcctactaagt 3777290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 29577536 - 29577504
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  29577536 caacaacaacaaccaagccttatcccactaagt 29577504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 43036106 - 43036142
Alignment:
Q  226 atatacaacaacaacaaccaagccttatcctactaag 262  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  43036106 atatacaacaacaaaaaccaagccttatcccactaag 43036142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 44941774 - 44941806
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  44941774 caacaacaacaaccaagccttatcccactaagt 44941806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 15215408 - 15215442
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||||||||||    
T  15215408 tacaacaacaacaaccaagccttatcctactaagt 15215442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 2027817 - 2027782
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  2027817 atacaacaacaacaaccaagccttatcccactaagt 2027782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 11523718 - 11523753
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  11523718 atacaacaacaacaaccaagccttatcccactaagt 11523753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 36545435 - 36545401
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  36545435 tacaacaacaacaaccaagccttatcccactaagt 36545401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 260
Target Start/End: Original strand, 38482729 - 38482759
Alignment:
Q  230 acaacaacaacaaccaagccttatcctacta 260  Q
    |||||||||||||||||||||||||||||||    
T  38482729 acaacaacaacaaccaagccttatcctacta 38482759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 1065005 - 1064972
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  1065005 acaacaacaacaaccaagccttatcccactaagt 1064972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 7531641 - 7531674
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||| |||||||||||||||||||||||||||||    
T  7531641 acaagaacaacaaccaagccttatcctactaagt 7531674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 14742079 - 14742112
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  14742079 acaacaacaacaaccaagccttatcccactaagt 14742112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 24837976 - 24837943
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  24837976 acaacaacaacaaccaagccttatcccactaagt 24837943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 30198263 - 30198296
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  30198263 acaacaacaacaaccaagccttatcccactaagt 30198296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 31716107 - 31716074
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  31716107 acaacaacaacaaccaagccttatcccactaagt 31716074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 32978159 - 32978126
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  32978159 acaacaacaacaaccaagccttatcccactaagt 32978126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 41031417 - 41031450
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  41031417 acaacaacaacaaccaagccttatcccactaagt 41031450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 41031523 - 41031556
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  41031523 acaacaacaacaaccaagccttatcccactaagt 41031556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 44047529 - 44047562
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  44047529 acaacaacaacaaccaagccttatcccactaagt 44047562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 1928585 - 1928617
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  1928585 caacaacaacaaccaagccttatcccactaagt 1928617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 10668495 - 10668527
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  10668495 caacaacaacaaccaagccttatcccactaagt 10668527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 16918494 - 16918526
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  16918494 caacaacaacaaccaagccttatcccactaagt 16918526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 35324057 - 35324025
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  35324057 caacaacaacaaccaagccttatcccactaagt 35324025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 39651026 - 39651058
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  39651026 caacaacaacaaccaagccttatcccactaagt 39651058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 3866357 - 3866324
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||||||||    
T  3866357 acaacaacaacaaccaagccttatcctactaagt 3866324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 1648152 - 1648116
Alignment:
Q  227 tatacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||| |||||||    
T  1648152 tatacaacaacaacaaccaagccttatcccactaagt 1648116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 14444957 - 14444921
Alignment:
Q  227 tatacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||| |||||||    
T  14444957 tatacaacaacaacaaccaagccttatcccactaagt 14444921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 25834965 - 25834930
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  25834965 atacaacaacaacaaccaagccttatcccactaagt 25834930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 37520733 - 37520698
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  37520733 atacaacaacaacaaccaagccttatcccactaagt 37520698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 7326156 - 7326190
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  7326156 tacaacaacaacaaccaagccttatcccactaagt 7326190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 11412992 - 11412962
Alignment:
Q  233 acaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||||||    
T  11412992 acaacaacaaccaagccttatcctactaagt 11412962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 12489798 - 12489832
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  12489798 tacaacaacaacaaccaagccttatcccactaagt 12489832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 31959803 - 31959773
Alignment:
Q  233 acaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||||||    
T  31959803 acaacaacaaccaagccttatcctactaagt 31959773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 36183733 - 36183703
Alignment:
Q  233 acaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||||||    
T  36183733 acaacaacaaccaagccttatcctactaagt 36183703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 38429695 - 38429661
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  38429695 tacaacaacaacaaccaagccttatcccactaagt 38429661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 42543521 - 42543487
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  42543521 tacaacaacaacaaccaagccttatcccactaagt 42543487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 227474 - 227441
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  227474 acaacaacaacaaccaagccttatcccactaagt 227441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 3635320 - 3635353
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  3635320 acaacaacaacaaccaagccttatcccactaagt 3635353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 4807880 - 4807847
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  4807880 acaacaacaacaaccaagccttatcccactaagt 4807847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 9531597 - 9531630
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  9531597 acaacaacaacaaccaagccttatcccactaagt 9531630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 12734985 - 12734952
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  12734985 acaacaacaacaaccaagccttatcccactaagt 12734952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 12882042 - 12882075
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  12882042 acaacaacaacaaccaagccttatcccactaagt 12882075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 13188427 - 13188394
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  13188427 acaacaacaacaaccaagccttatcccactaagt 13188394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 15025779 - 15025746
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  15025779 acaacaacaacaaccaagccttatcccactaagt 15025746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 17670753 - 17670720
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  17670753 acaacaacaacaaccaagccttatcccactaagt 17670720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 30306317 - 30306284
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  30306317 acaacaacaacaaccaagccttatcccactaagt 30306284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 35643233 - 35643200
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  35643233 acaacaacaacaaccaagccttatcccactaagt 35643200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 38328367 - 38328400
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  38328367 acaacaacaacaaccaagccttatcccactaagt 38328400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 43573127 - 43573160
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  43573127 acaacaacaacaaccaagccttatcccactaagt 43573160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 44437718 - 44437751
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  44437718 acaacaacaacaaccaagccttatcccactaagt 44437751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 10403891 - 10403923
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  10403891 caacaacaacaaccaagccttatcccactaagt 10403923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 12520060 - 12520092
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  12520060 caacaacaacaaccaagccttatcccactaagt 12520092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 14520946 - 14520978
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaa 261  Q
    ||||||||||||||||||||||||||| |||||    
T  14520946 tacaacaacaacaaccaagccttatcccactaa 14520978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 33281174 - 33281138
Alignment:
Q  227 tatacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||| |||||||    
T  33281174 tatacaacaacaacaaccaagccttatcccactaagt 33281138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 2885717 - 2885752
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  2885717 atacaacaacaacaaccaagccttatcccactaagt 2885752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 11594247 - 11594212
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  11594247 atacaacaacaacaaccaagccttatcccactaagt 11594212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Complemental strand, 29312277 - 29312242
Alignment:
Q  227 tatacaacaacaacaaccaagccttatcctactaag 262  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29312277 tatacaacaacaacaaccaagccttatcccactaag 29312242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 29318789 - 29318824
Alignment:
Q  227 tatacaacaacaacaaccaagccttatcctactaag 262  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29318789 tatacaacaacaacaaccaagccttatcccactaag 29318824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 36101772 - 36101807
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  36101772 atacaacaacaacaaccaagccttatcccactaagt 36101807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 24177619 - 24177657
Alignment:
Q  225 aatatacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  24177619 aatatacatcaacaacaaccaagctttatcctactaagt 24177657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 12841272 - 12841305
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  12841272 acaacaacaacaaccaagccttatcccactaagt 12841305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 12966301 - 12966268
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  12966301 acaacaacaacaaccaagccttatcccactaagt 12966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 14594037 - 14594004
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  14594037 acaacaacaacaaccaagccttatcccactaagt 14594004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 16013560 - 16013527
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  16013560 acaacaacaacaaccaagccttatcccactaagt 16013527  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 20899456 - 20899423
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  20899456 acaacaacaacaaccaagccttatcccactaagt 20899423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 28208325 - 28208358
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  28208325 acaacaacaacaaccaagccttatcccactaagt 28208358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 29650669 - 29650636
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  29650669 acaacaacaacaaccaagccttatcccactaagt 29650636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 31005490 - 31005457
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  31005490 acaacaacaacaaccaagccttatcccactaagt 31005457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 31682599 - 31682632
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  31682599 acaacaacaacaaccaagccttatcccactaagt 31682632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 32631849 - 32631816
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  32631849 acaacaacaacaaccaagccttatcccactaagt 32631816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 35725568 - 35725601
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  35725568 acaacaacaacaaccaagccttatcccactaagt 35725601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 38900241 - 38900208
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  38900241 acaacaacaacaaccaagccttatcccactaagt 38900208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 39906369 - 39906402
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  39906369 acaacaacaacaaccaagccttatcccactaagt 39906402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 43423988 - 43424021
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  43423988 acaacaacaacaaccaagccttatcccactaagt 43424021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 43491593 - 43491560
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  43491593 acaacaacaacaaccaagccttatcccactaagt 43491560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 44855171 - 44855204
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  44855171 acaacaacaacaaccaagccttatcccactaagt 44855204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 47413712 - 47413745
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  47413712 acaacaacaacaaccaagccttatcccactaagt 47413745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 25891172 - 25891140
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||| ||||||||    
T  25891172 caacaacaacaaccaagccttatcgtactaagt 25891140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 28355450 - 28355418
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  28355450 caacaacaacaaccaagccttatcccactaagt 28355418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 30199964 - 30199996
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaag 262  Q
    |||||||||||||||||||||||||| ||||||    
T  30199964 acaacaacaacaaccaagccttatcccactaag 30199996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 31840514 - 31840482
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  31840514 caacaacaacaaccaagccttatcccactaagt 31840482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 37618229 - 37618197
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  37618229 caacaacaacaaccaagccttatcccactaagt 37618197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 25527 - 25562
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  25527 atacaacaacaacaaccaagccttatcccactaagt 25562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 12890862 - 12890827
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  12890862 atacaacaacaacaaccaagccttatcccactaagt 12890827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 28085661 - 28085628
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  28085661 acaacaacaacaaccaagccttatcccactaagt 28085628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 13606992 - 13607027
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  13606992 atacaacaacaacaaccaagccttatcccactaagt 13607027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 28411963 - 28411928
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  28411963 atacaacaacaacaaccaagccttatcccactaagt 28411928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 42576297 - 42576262
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||||| |||||||    
T  42576297 atacaacaacaacaaccaagccttatcccactaagt 42576262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 29816668 - 29816634
Alignment:
Q  229 tacaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||| |||||||    
T  29816668 tacaacaacaacaaccaagccttatcccactaagt 29816634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 4496669 - 4496636
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  4496669 acaacaacaacaaccaagccttatcccactaagt 4496636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 12492381 - 12492414
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  12492381 acaacaacaacaaccaagccttatcccactaagt 12492414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 14665997 - 14665964
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  14665997 acaacaacaacaaccaagccttatcccactaagt 14665964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 20367178 - 20367145
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||||||| ||||    
T  20367178 acaacaacaacaaccaagccttatcctaccaagt 20367145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 22703923 - 22703890
Alignment:
Q  228 atacaacaacaacaaccaagccttatcctactaa 261  Q
    |||||||||||||||||||| |||||||||||||    
T  22703923 atacaacaacaacaaccaagtcttatcctactaa 22703890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 28976856 - 28976889
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  28976856 acaacaacaacaaccaagccttatcccactaagt 28976889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 29929339 - 29929306
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  29929339 acaacaacaacaaccaagccttatcccactaagt 29929306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 408492 - 408524
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  408492 caacaacaacaaccaagccttatcccactaagt 408524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 11675814 - 11675782
Alignment:
Q  231 caacaacaacaaccaagccttatcctactaagt 263  Q
    ||||||||||||||||||||||||| |||||||    
T  11675814 caacaacaacaaccaagccttatccaactaagt 11675782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 11541 - 11579
Alignment:
Q  225 aatatacaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  11541 aatatacaacaacagcaaccaaaccttatcctactaagt 11579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 28886 - 28919
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  28886 acaacaacaacaaccaagccttatcccactaagt 28919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 31753 - 31720
Alignment:
Q  230 acaacaacaacaaccaagccttatcctactaagt 263  Q
    |||||||||||||||||||||||||| |||||||    
T  31753 acaacaacaacaaccaagccttatcccactaagt 31720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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