View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0681_low_3 (Length: 526)
Name: NF0681_low_3
Description: NF0681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0681_low_3 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 400; Significance: 0; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 86 - 513
Target Start/End: Original strand, 22430505 - 22430932
Alignment:
| Q |
86 |
tgatcgaacatgtgagttttcaataccttccattagaatacctgaactgggtgctattgataggcgtcgaatcattccagttaaatacaattgattgttc |
185 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22430505 |
tgatcgaacatgtgggttttcaataccttccattagaatacctgaattgggtgctattgataggcgttgaatcattccagttaaatacaattgattgttc |
22430604 |
T |
|
| Q |
186 |
tcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatac |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22430605 |
tcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatac |
22430704 |
T |
|
| Q |
286 |
ttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaaccc |
385 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22430705 |
ttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctgcaacctctttcaatgtccttcccgttttttctttcacaaaccc |
22430804 |
T |
|
| Q |
386 |
ttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaa |
485 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22430805 |
ttcagcaatccattgacaagttaatgtctttgaataaactatatagtctttaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaa |
22430904 |
T |
|
| Q |
486 |
tcatggtaactaagtcctaaagtttttc |
513 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
22430905 |
tcatggtaactaagtcctaaagtttttc |
22430932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 86 - 513
Target Start/End: Original strand, 22467286 - 22467713
Alignment:
| Q |
86 |
tgatcgaacatgtgagttttcaataccttccattagaatacctgaactgggtgctattgataggcgtcgaatcattccagttaaatacaattgattgttc |
185 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||| | || | || | | | |||||||||||||||||||||||||||||||| ||||||| |||| | |
|
|
| T |
22467286 |
tgatcgaacatgtgagttttcaataactttcattaaattatcagaggtagtttctattgataggcgtcgaatcattccagttaaagacaattgtttgtcc |
22467385 |
T |
|
| Q |
186 |
tcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatac |
285 |
Q |
| |
|
|| || |||| ||| ||||| ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22467386 |
tcagtaatattcttgcaaaaacttaaatcctcatatttatcaaggatcattgcatgcactagatcatgaacacgacaactttttactcttccatcaatac |
22467485 |
T |
|
| Q |
286 |
ttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaaccc |
385 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| || | | ||| ||||||||||| |
|
|
| T |
22467486 |
ttattgaaactacttgcaccaaacttctatggatcaactctattaaatatccttcagcaacctcttccaatgtcctccccctgtcttccttcacaaaccc |
22467585 |
T |
|
| Q |
386 |
ttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaa |
485 |
Q |
| |
|
||||||||||||||| | ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
22467586 |
ttcagcaatccattggcgagtcaacgtctttgaatgaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgtaaggtaaa |
22467685 |
T |
|
| Q |
486 |
tcatggtaactaagtcctaaagtttttc |
513 |
Q |
| |
|
| ||||||||||| ||||||| |||||| |
|
|
| T |
22467686 |
ttatggtaactaaatcctaaaatttttc |
22467713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 85 - 513
Target Start/End: Original strand, 22357336 - 22357764
Alignment:
| Q |
85 |
atgatcgaacatgtgagttttcaataccttccattagaatacctgaactgggtgctattgataggcgtcgaatcattccagttaaatacaattgattgtt |
184 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| || || | || |||||||||||||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
22357336 |
atgatcgaacatgtgagctttcaataccttccattcgattatcataattgggtgctattgataggcgtcgaatcattccagttaaagacaattgtttgcc |
22357435 |
T |
|
| Q |
185 |
ctcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaata |
284 |
Q |
| |
|
||| || |||| || ||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
22357436 |
ctcagtaatattctcgcaaaagcttaaatgcttatgtttttcaaggatcatttcatgcactagatcatgaacacgacaacgttttactcttccatcaata |
22357535 |
T |
|
| Q |
285 |
cttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacc |
384 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||| || || ||| | | || ||||||||||| |
|
|
| T |
22357536 |
ctgattgaatctacttgcaccaaacttctatgtattaactcttttaaatatccttctgcaacctcttccatcgttctttccccatattgtttcacaaacc |
22357635 |
T |
|
| Q |
385 |
cttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaa |
484 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
22357636 |
cttcagcaatccattgtcgagtcaatgtctttgaatgaactttatagtcttcaggatataatccaaaatacaagaaacatgacttgaggtagtaaggcaa |
22357735 |
T |
|
| Q |
485 |
atcatggtaactaagtcctaaagtttttc |
513 |
Q |
| |
|
|||||||||||||| ||||||| |||||| |
|
|
| T |
22357736 |
atcatggtaactaaatcctaaaatttttc |
22357764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 86 - 513
Target Start/End: Original strand, 22435966 - 22436393
Alignment:
| Q |
86 |
tgatcgaacatgtgagttttcaataccttccattagaatacctgaactgggtgctattgataggcgtcgaatcattccagttaaatacaattgattgttc |
185 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| || ||||||| ||| ||||||||||||||| ||| || ||||||| | |||||||||| | |
|
|
| T |
22435966 |
tgatcgaacatgtgagctttcaataccttccattagattataagaactggttgccattgataggcgtcgagtcactctagttaaagaaaattgattgtcc |
22436065 |
T |
|
| Q |
186 |
tcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatac |
285 |
Q |
| |
|
|| || |||| ||| ||||| ||||||||||||||||| | |||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22436066 |
tcagtaatattcttgcaaaaacttaaatcctcatatttctcaaggatcattgcatgcactaaatcatgaacacgacaactttttactcttccatcaatac |
22436165 |
T |
|
| Q |
286 |
ttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaaccc |
385 |
Q |
| |
|
|||||||| |||| |||||||||||||||| || |||||||||||||||||||| | ||| |||| |||||||||||| | | ||||||||| ||||| |
|
|
| T |
22436166 |
ttattgaaactacatgcaccaaacttctattgaccaactctattaaatatccttttgcaatatcttccaatgtccttcccctctcttctttcacgaaccc |
22436265 |
T |
|
| Q |
386 |
ttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaa |
485 |
Q |
| |
|
||||||||||||||| | ||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||| |
|
|
| T |
22436266 |
ttcagcaatccattggcgagtcaatgtttttgaacgaactatatagtcttcaggatataatccaaaatacaagaaacacgacttgaggtagtaaggcaaa |
22436365 |
T |
|
| Q |
486 |
tcatggtaactaagtcctaaagtttttc |
513 |
Q |
| |
|
||||||||||||| ||||| | |||||| |
|
|
| T |
22436366 |
tcatggtaactaaatcctagaatttttc |
22436393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 87 - 504
Target Start/End: Original strand, 22367260 - 22367677
Alignment:
| Q |
87 |
gatcgaacatgtgagttttcaataccttccattagaatacctgaactgggtgctattgataggcgtcgaatcattccagttaaatacaattgattgttct |
186 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| || | ||||| | ||||||||||||||||||||||||||||||| || |||||| ||| || |
|
|
| T |
22367260 |
gatcgaacatgtgagctttcaataccttccattagattatcagaacttgatgctattgataggcgtcgaatcattccagttgaaggcaattgtctgtcct |
22367359 |
T |
|
| Q |
187 |
cggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatact |
286 |
Q |
| |
|
|||| ||| ||| ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| | |
|
|
| T |
22367360 |
cggtaatactcttgcaaaagcttaaatcctcatgtttattaaggatcattgcatgcactagatcatgaacacggcaactgtctactcttccatcaatagt |
22367459 |
T |
|
| Q |
287 |
tattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaaccct |
386 |
Q |
| |
|
|| ||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||| ||||||| |||| ||| |||||||||||||||| |
|
|
| T |
22367460 |
gatcccatctactcgcaccaaacttctacggatcaactctattaaatgtccttctgcaacctcttccaatgtcattcccctttcttctttcacaaaccct |
22367559 |
T |
|
| Q |
387 |
tcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaat |
486 |
Q |
| |
|
|||||||||||||||| ||| ||| | |||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22367560 |
tcagcaatccattgacgagtcaatatatttgaacgaacatttgagtcttcaggatataatccaaagtacaagaaacatgacttgaggttgcaaggcaaat |
22367659 |
T |
|
| Q |
487 |
catggtaactaagtccta |
504 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
22367660 |
catggtaactaagtccta |
22367677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 86 - 513
Target Start/End: Original strand, 22353150 - 22353575
Alignment:
| Q |
86 |
tgatcgaacatgtgagttttcaataccttccattagaatacctgaactgggtgctattgataggcgtcgaatcattccagttaaatacaattgattgttc |
185 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||| || | ||||| | ||||||||||||||||| ||||||||||||||| ||| ||| ||| || |
|
|
| T |
22353150 |
tgatcgaacatgtgagttttcaatacttttcattaacttatcagaactagttgctattgataggcgtcaaatcattccagttaatgacagttgtttgctc |
22353249 |
T |
|
| Q |
186 |
tcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatac |
285 |
Q |
| |
|
|| |||| ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
22353250 |
---gtaatattcttgcaaaaacttaaatcctcatattttctaaggatcatttcatgcactagatcgtgaacacgacaactttttactcttccatcaatac |
22353346 |
T |
|
| Q |
286 |
ttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaaccc |
385 |
Q |
| |
|
| | |||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| || ||||||||| | ||||||||||||||| |
|
|
| T |
22353347 |
tgactgaatctacttgcaccaaacttctatggattaactcttttaaatatccttctgcaacctcttccattgtccttcccccgtattctttcacaaaccc |
22353446 |
T |
|
| Q |
386 |
ttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttg-caaggcaa |
484 |
Q |
| |
|
|||||||||||||||| ||| ||||| | |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
22353447 |
ctcagcaatccattgacgagtcaatgtatctgaataaacttcgtagtcttcgagatataatccaaaatacaagaaacatgacttgaggtagtaaaggcaa |
22353546 |
T |
|
| Q |
485 |
atcatggtaactaagtcctaaagtttttc |
513 |
Q |
| |
|
|||||||||||||| ||||||| |||||| |
|
|
| T |
22353547 |
atcatggtaactaaatcctaaaatttttc |
22353575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 86 - 513
Target Start/End: Original strand, 22442074 - 22442504
Alignment:
| Q |
86 |
tgatcgaacatgtgagttttcaataccttccatta---gaatacctgaactgggtgctattgataggcgtcgaatcattccagttaaatacaattgattg |
182 |
Q |
| |
|
|||||||||||||||| | || || |||||||||| || || | ||| |||||||||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
22442074 |
tgatcgaacatgtgagctatctattccttccattattagattatcagaattgggtgctattgataggcgtcgaatcattccagttaaagacaattgtttt |
22442173 |
T |
|
| Q |
183 |
ttctcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaa |
282 |
Q |
| |
|
||| || |||| || ||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
22442174 |
ccctcagtaatattctcgcaaaagcttaaatgcttatgtttttcaaggatcatttcatgcactagatcatgaacacggcaactttttactcttccatcaa |
22442273 |
T |
|
| Q |
283 |
tacttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaa |
382 |
Q |
| |
|
|||| ||||| |||||||||||||||||||| ||| ||| || |||||||||||||| |||||| || |||||||||| | | |||||||||||| |
|
|
| T |
22442274 |
tactggttgaaactacttgcaccaaacttctacagattaacacttttaaatatccttctgcaaccttttccaatgtcctttccccatattctttcacaaa |
22442373 |
T |
|
| Q |
383 |
cccttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggc |
482 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||||||| || || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22442374 |
cccttcagctatccattgacgagtcaatgtctttgaacaagcttcatagtcttcgggatataatccaaaatacaagaaacatgacttgaggttgcaaggc |
22442473 |
T |
|
| Q |
483 |
aaatcatggtaactaagtcctaaagtttttc |
513 |
Q |
| |
|
|||||||||||||| ||||||||| |||||| |
|
|
| T |
22442474 |
aaatcatggtaactgagtcctaaaatttttc |
22442504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 86 - 513
Target Start/End: Original strand, 22629781 - 22630203
Alignment:
| Q |
86 |
tgatcgaacatgtgagttttcaataccttccattagaatacctgaactgggtgctattgataggcgtcgaatcattccagttaaatacaattgattgttc |
185 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||| | || | | | | ||||||||||||||||| |||||||||||||||| ||||||| |||| | |
|
|
| T |
22629781 |
tgatcgaacatgtgagttttcaatacttttcattaaattatcagtagt---tgctattgataggcgtcaaatcattccagttaaagacaattgcttgtcc |
22629877 |
T |
|
| Q |
186 |
tcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatac |
285 |
Q |
| |
|
|| | |||| ||| ||||| ||||||||||||||||| | |||||||||| |||||||||||||||| |||||||||||| |||||||||||| |||| |
|
|
| T |
22629878 |
tcaataatattcttgcaaaaacttaaatcctcatatttctcaaggatcattgcatgcactagatcatgtacacgacaactttttactcttccat--atac |
22629975 |
T |
|
| Q |
286 |
ttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaaccc |
385 |
Q |
| |
|
|| ||||| |||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||| ||||| | ||||||||||||||| |
|
|
| T |
22629976 |
ttgttgaaactacttgcaccaaacttctacggaccaactctattaaatatccttctccaacctcttccaatgttcttcccttgacttctttcacaaaccc |
22630075 |
T |
|
| Q |
386 |
ttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaa |
485 |
Q |
| |
|
|||||| |||||||| | ||| || ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
22630076 |
ttcagcgatccattggcgagtcaacacctttgaacgaactatatagtcttcaggatagaatccaaaatacaagaaacatgacttgaggttgtaaggtaaa |
22630175 |
T |
|
| Q |
486 |
tcatggtaactaagtcctaaagtttttc |
513 |
Q |
| |
|
||||||||||||| ||||||| |||||| |
|
|
| T |
22630176 |
tcatggtaactaaatcctaaattttttc |
22630203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 192 - 513
Target Start/End: Original strand, 22634947 - 22635268
Alignment:
| Q |
192 |
atatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattg |
291 |
Q |
| |
|
|||| ||| ||||| |||||||||| | |||| | |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||| ||| |
|
|
| T |
22634947 |
atattcttgcaaaaacttaaatccttaaatttgtcaaggatcatttcatgcactagatcatgaacgcggcaactttttactcttccatcaatactagttg |
22635046 |
T |
|
| Q |
292 |
aatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagc |
391 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| | | ||||||||| ||||||||||| |
|
|
| T |
22635047 |
aaactacttgcaccaaacttctatggatcaactctactaaatatccttctgcaacctcttcaaatgtccttcccctgtcttctttcacgaacccttcagc |
22635146 |
T |
|
| Q |
392 |
aatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcatgg |
491 |
Q |
| |
|
||||||||| | ||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
22635147 |
aatccattggcgagtcaatgtttttgaacgaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggtagcatggcaaatcatgg |
22635246 |
T |
|
| Q |
492 |
taactaagtcctaaagtttttc |
513 |
Q |
| |
|
||||||||||||||| |||||| |
|
|
| T |
22635247 |
taactaagtcctaaaatttttc |
22635268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 137 - 495
Target Start/End: Original strand, 22457875 - 22458233
Alignment:
| Q |
137 |
tgctattgataggcgtcgaatcattccagttaaatacaattgattgttctcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatt |
236 |
Q |
| |
|
|||||||||||||||||||| ||| ||| ||||| | |||| | | |||| | |||| ||| ||||| ||||| || ||| |||||| |||||||| | |
|
|
| T |
22457875 |
tgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaat |
22457974 |
T |
|
| Q |
237 |
tcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaacttctatggatcaactctattaaatatc |
336 |
Q |
| |
|
||||||| ||||||||||||| ||||||| || |||||||||||||||| |||||| ||||||||||||||| |||| |||||| ||| ||||||||| |
|
|
| T |
22457975 |
gcatgcaccagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatc |
22458074 |
T |
|
| Q |
337 |
cttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaatgtctttgaataaactatatagtcttc |
436 |
Q |
| |
|
| ||| |||| |||| |||||| || | | | ||||||||||| |||||||| |||||||| | | | | | | |||| | ||||||| | |||| |
|
|
| T |
22458075 |
catctgcaacatcttccaatgtttttaccatatcatctttcacaaatccttcagccatccattgccgaatcagtatatttgtaggaactatacaaccttc |
22458174 |
T |
|
| Q |
437 |
aggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcatggtaac |
495 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||| ||| || ||||||||||| |
|
|
| T |
22458175 |
aggatataatccaaaatacaacaaacatgacttgagattgtaagacagatcatggtaac |
22458233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 137 - 495
Target Start/End: Original strand, 22480856 - 22481214
Alignment:
| Q |
137 |
tgctattgataggcgtcgaatcattccagttaaatacaattgattgttctcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatt |
236 |
Q |
| |
|
|||||||||||||||||||| ||| ||| ||||| | |||| | | |||| | |||| ||| ||||| ||||| || ||| |||||| |||||||| | |
|
|
| T |
22480856 |
tgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaat |
22480955 |
T |
|
| Q |
237 |
tcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaacttctatggatcaactctattaaatatc |
336 |
Q |
| |
|
||||||| ||||||||||||| ||||||| || |||||||||||||||| |||||| ||||||||||||||| |||| |||||| ||| ||||||||| |
|
|
| T |
22480956 |
gcatgcaccagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatc |
22481055 |
T |
|
| Q |
337 |
cttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaatgtctttgaataaactatatagtcttc |
436 |
Q |
| |
|
| ||| |||| |||| |||||| || | | | ||||||||||| |||||||| |||||||| | | | | | | |||| | ||||||| | |||| |
|
|
| T |
22481056 |
catctgcaacatcttccaatgtttttaccatatcatctttcacaaatccttcagccatccattgccgaatcagtatatttgtaggaactatacaaccttc |
22481155 |
T |
|
| Q |
437 |
aggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcatggtaac |
495 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||| ||| || ||||||||||| |
|
|
| T |
22481156 |
aggatataatccaaaatacaacaaacatgacttgagattgtaagacagatcatggtaac |
22481214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 86 - 391
Target Start/End: Original strand, 37930197 - 37930500
Alignment:
| Q |
86 |
tgatcgaacatgtgagttttcaataccttccattagaatacctgaactgggtgctattgataggcgtcgaatcattccagttaaatacaattgattgttc |
185 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||| || ||| ||||||||||||||||||||| ||| ||||| || | |||||| ||| | |
|
|
| T |
37930197 |
tgatcgaacacgtgaactttcaataccttccattagattattagaattgggtgctattgataggcgtcaaattattccggt---agacaattttttgccc |
37930293 |
T |
|
| Q |
186 |
tcggtgatatacttacaaaagcttaaatcctcatattttttaa-ggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaata |
284 |
Q |
| |
|
| || |||| || ||||| ||||||||| | |||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
37930294 |
taagtaatattctcgcaaaaacttaaatccataaatttgtcaaaggatcatttcatgcactagatcatgaacacgacaactttttactcttccatcaata |
37930393 |
T |
|
| Q |
285 |
cttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacc |
384 |
Q |
| |
|
| ||||| |||||||||||||||||||| ||| |||||| ||||||||||||| |||||| || |||||||||| | | |||||||||||||| |
|
|
| T |
37930394 |
ccggttgaaactacttgcaccaaacttctacagattaactcttttaaatatccttccgcaaccttttccaatgtcctttcctcgtattctttcacaaacc |
37930493 |
T |
|
| Q |
385 |
cttcagc |
391 |
Q |
| |
|
||||||| |
|
|
| T |
37930494 |
cttcagc |
37930500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 192 - 466
Target Start/End: Original strand, 22620325 - 22620599
Alignment:
| Q |
192 |
atatacttacaaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattg |
291 |
Q |
| |
|
|||||||| ||||| |||| ||||||| | |||| ||| ||||| | | | |||||||||||| | ||||||| || | ||||||| || |||| || |
|
|
| T |
22620325 |
atatacttgcaaaaacttagatcctcacacttttcaagtatcatcatacgtattagatcatgaacgcaacaactttttgtttttccatcgattcttagtg |
22620424 |
T |
|
| Q |
292 |
aatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagc |
391 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |||| ||||||||| |||| |||| ||| || | || ||| |||||| |||||||||||||| |
|
|
| T |
22620425 |
aagatacttgcaccaaacttctatggatcaactctgttaagtatccttctgcaacttcttccaaagtattccccctttcttcttttacaaacccttcagc |
22620524 |
T |
|
| Q |
392 |
aatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatga |
466 |
Q |
| |
|
|||||||| | | | ||| ||||||||| |||| |||| ||||| |||||||||||||||||||| |||||||| |
|
|
| T |
22620525 |
tatccattgccgaatcaatctctttgaatcaactttataatcttctggatataatccaaaatacaataaacatga |
22620599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 208 - 496
Target Start/End: Original strand, 30988750 - 30989038
Alignment:
| Q |
208 |
ttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaa |
307 |
Q |
| |
|
||||||||||| |||||| ||||||||| || | | |||||||||||||||||||| | | || | ||||||| || | ||| |||||||||||| |
|
|
| T |
30988750 |
ttaaatcctcaaatttttcaaggatcatatcgcgtattagatcatgaacacgacaacctttagctttaccatcaactctaaccgaagatacttgcaccaa |
30988849 |
T |
|
| Q |
308 |
acttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagtt |
407 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||| |||| ||| ||| | ||| ||| || ||||| ||||||||||| | |||||| | | | |
|
|
| T |
30988850 |
gcttctatggatcaactctgttaaatatccttctgcaacgtcttccaaagtcttccctctttcctccttcacgaacccttcagctacccattgtcgaatc |
30988949 |
T |
|
| Q |
408 |
aatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcatggtaact |
496 |
Q |
| |
|
||| ||||||| | |||| ||| ||||| ||||||| |||||||||||| || ||||||||||| | |||||||||||| |||||| |
|
|
| T |
30988950 |
aatctctttgatttaacttcataatcttctggatatattccaaaatacaacaagcatgacttgagagagtaaggcaaatcatcgtaact |
30989038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 210 - 489
Target Start/End: Complemental strand, 21931440 - 21931161
Alignment:
| Q |
210 |
aaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaac |
309 |
Q |
| |
|
|||||||||| ||||| ||||||||| || || | |||||||||||||||||||| | | || | |||||||| || | |||| |||||| || | | |
|
|
| T |
21931440 |
aaatcctcatgtttttgaaggatcatatcgtgtattagatcatgaacacgacaacctttagctttgccatcaattctaagtgaagatacttgaacgaggc |
21931341 |
T |
|
| Q |
310 |
ttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaa |
409 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | || |||| ||| ||| | || ||| || || |||||||||||||| |||||||| | ||| | |
|
|
| T |
21931340 |
ttctatggatcaactctgttaaatatccttctgccacttcttccaaagtcatccccttttcctccttgacaaacccttcagctatccattgtcgagtcac |
21931241 |
T |
|
| Q |
410 |
tgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcat |
489 |
Q |
| |
|
| ||||||| | |||| ||| ||||| ||||||| ||||||||||||||| |||| |||||| | | |||||||||||| |
|
|
| T |
21931240 |
tctctttgatttaacttcataatcttctggatatactccaaaatacaagaagcatggcttgagatagtaaggcaaatcat |
21931161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 245 - 489
Target Start/End: Complemental strand, 21946608 - 21946364
Alignment:
| Q |
245 |
tagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctaca |
344 |
Q |
| |
|
|||||||||||||||||||| | | || | |||||||| || | |||| |||||| |||| |||||||||||||||||| |||||||||||||| | |
|
|
| T |
21946608 |
tagatcatgaacacgacaacctttagctttaccatcaattctaagtgaagatacttgaaccaggcttctatggatcaactctgttaaatatccttctgcc |
21946509 |
T |
|
| Q |
345 |
acctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatata |
444 |
Q |
| |
|
|| |||| ||| ||| | ||| ||| || ||||||||||||||||| |||||||| | | | | | |||| || | |||| ||| ||||| ||||||| |
|
|
| T |
21946508 |
acttcttccaaagtcttccctctttcctccttcacaaacccttcagctatccattgtcgaatcactctcttcgatttaacttcataatcttctggatata |
21946409 |
T |
|
| Q |
445 |
atccaaaatacaagaaacatgacttgaggttgcaaggcaaatcat |
489 |
Q |
| |
|
||||||||| || || ||||||||||| | |||||||||||||| |
|
|
| T |
21946408 |
ctccaaaataaaacaagcatgacttgagatagcaaggcaaatcat |
21946364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 489
Target Start/End: Complemental strand, 22180436 - 22180157
Alignment:
| Q |
210 |
aaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaac |
309 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||| | | |||||||||||||||||||| | | || | |||||||| || | ||| |||||| |||| | |
|
|
| T |
22180436 |
aaatcctcatttttttgaaggatcatatcacgtattagatcatgaacacgacaacctttagctttgccatcaattctaagcgaagatacttgaaccaggc |
22180337 |
T |
|
| Q |
310 |
ttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaa |
409 |
Q |
| |
|
||||||||||||||||| ||| |||||| ||| | || |||| || ||| |||| ||| || ||||||||||||||||| ||||||| | ||||| |
|
|
| T |
22180336 |
ttctatggatcaactctgttagatatccctctgccacttcttccattgtttttcccttttcctccttcacaaacccttcagctatccattttcgagttac |
22180237 |
T |
|
| Q |
410 |
tgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcat |
489 |
Q |
| |
|
| |||| || | |||| ||| || || ||||||| |||||||||||| |||||||||||||| | | |||||||||||| |
|
|
| T |
22180236 |
tctcttcgatttaacttcataatcctctggatatactccaaaatacaacaaacatgacttgagatagtaaggcaaatcat |
22180157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 466
Target Start/End: Original strand, 22614709 - 22614974
Alignment:
| Q |
201 |
caaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctactt |
300 |
Q |
| |
|
||||| |||||||||| | |||||| || |||||| || | | |||||||||||||||||||||| | ||| ||||||||||| | || ||| | || |
|
|
| T |
22614709 |
caaaaacttaaatccttaaatttttcaaagatcatcacacgtaatagatcatgaacacgacaacttttaacttttccatcaatattaatcgaagagattt |
22614808 |
T |
|
| Q |
301 |
gcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattg |
400 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| ||| |||| |||| |||||| | || ||| |||||||||||||||||||| ||||| || |
|
|
| T |
22614809 |
gcaccaaacttctattaatcaactctgataaataagtttccgcaacttcttctaatgtcttccccctttcctctttcacaaacccttcagctatccactg |
22614908 |
T |
|
| Q |
401 |
actagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatga |
466 |
Q |
| |
|
|| | || | |||| || | || | ||||||||| || ||||||||||||||||| |||||||| |
|
|
| T |
22614909 |
acgaagtagtatcttagattcaatttcatagtcttctgggtataatccaaaatacaacaaacatga |
22614974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 489
Target Start/End: Complemental strand, 22116067 - 22115825
Alignment:
| Q |
247 |
gatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaac |
346 |
Q |
| |
|
|||||||||||||||||| | | || | |||||||| || | ||| |||||| |||| ||||||||||||||||||| ||| |||||| ||| | || |
|
|
| T |
22116067 |
gatcatgaacacgacaacctttagctttgccatcaattctaagcgaagatacttgaaccatacttctatggatcaactctgttatatatccctctgccac |
22115968 |
T |
|
| Q |
347 |
ctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataat |
446 |
Q |
| |
|
|| | || ||| |||| ||| || ||||||||||||||||| |||||||| | ||| | | ||||||| | |||| | | ||||| || |||| | |
|
|
| T |
22115967 |
ttcatccatagtctttcccctttcctccttcacaaacccttcagctatccattgtcgagtgattctctttgatttaacttcaaaatcttctgggtatact |
22115868 |
T |
|
| Q |
447 |
ccaaaatacaagaaacatgacttgaggttgcaaggcaaatcat |
489 |
Q |
| |
|
||||||||||| |||||||||||||| | | |||||||||||| |
|
|
| T |
22115867 |
ccaaaatacaacaaacatgacttgagatagtaaggcaaatcat |
22115825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 296 - 489
Target Start/End: Complemental strand, 22105641 - 22105448
Alignment:
| Q |
296 |
tacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatc |
395 |
Q |
| |
|
|||||| |||| |||||||||||||||||| |||||||||||||| | || || | ||| ||| | || ||| || ||||||||||||||||| ||| |
|
|
| T |
22105641 |
tacttgaaccaggcttctatggatcaactctgttaaatatccttctgccacttcgtccaaagtcttccccttttcctccttcacaaacccttcagctatc |
22105542 |
T |
|
| Q |
396 |
cattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcat |
489 |
Q |
| |
|
||||| | ||| | | |||| || | |||| ||| ||||| ||||||| |||||| ||||| || ||||||||||| | | |||||||||||| |
|
|
| T |
22105541 |
cattgtcgagtcactctcttcgatttaacttcataatcttctggatatactccaaagtacaacaagcatgacttgagatagtaaggcaaatcat |
22105448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 489
Target Start/End: Complemental strand, 22053690 - 22053446
Alignment:
| Q |
245 |
tagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctaca |
344 |
Q |
| |
|
|||||||||||||||||| | | | || | |||||||| || | |||| |||||| |||| |||||||||||||||||| ||||||||||||| | |
|
|
| T |
22053690 |
tagatcatgaacacgacatcctttagctttgccatcaattctaagtgaagatacttgaaccaggcttctatggatcaactctgataaatatccttctgcc |
22053591 |
T |
|
| Q |
345 |
acctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatata |
444 |
Q |
| |
|
|| |||| ||| ||| | || ||| || |||||||||||||| || |||||||| | | | | | |||||||| |||| ||| ||||| ||||||| |
|
|
| T |
22053590 |
acttcttccaaagtcttccccttttcctccttcacaaacccttctgctatccattgtcgaatcactcgctttgaattaacttcataatcttctggatata |
22053491 |
T |
|
| Q |
445 |
atccaaaatacaagaaacatgacttgaggttgcaaggcaaatcat |
489 |
Q |
| |
|
|||||||||||| || ||||||| ||| | | |||||||||||| |
|
|
| T |
22053490 |
ctccaaaatacaacaagcatgactcgagatagtaaggcaaatcat |
22053446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 489
Target Start/End: Complemental strand, 22035536 - 22035257
Alignment:
| Q |
210 |
aaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaac |
309 |
Q |
| |
|
||||||| || ||||| ||||||||| || | | |||||||||||||||||||| | | || | |||||||| || | || |||||| |||| | |
|
|
| T |
22035536 |
aaatccttatttttttgaaggatcatatcgcgtattagatcatgaacacgacaacctttagctttgccatcaattctaagcgaggatacttgaaccaggc |
22035437 |
T |
|
| Q |
310 |
ttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaa |
409 |
Q |
| |
|
||||||||||||||||||||| |||||| || | | |||| || |||| |||| ||| || |||| |||||||||||| |||||||| | ||| | |
|
|
| T |
22035436 |
ttctatggatcaactctattagatatccctcagccagttcttccattgtctttcccttttcctccttcataaacccttcagctatccattgtcgagtcac |
22035337 |
T |
|
| Q |
410 |
tgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcat |
489 |
Q |
| |
|
| ||||||| | |||| | | ||||| ||||||| |||||||||||| || |||| |||||| | | |||||||||||| |
|
|
| T |
22035336 |
tctctttgatttaacttcaaaatcttctggatatactccaaaatacaacaagcatggcttgagatagtaaggcaaatcat |
22035257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 469
Target Start/End: Original strand, 22656621 - 22656772
Alignment:
| Q |
318 |
atcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaatgtctttg |
417 |
Q |
| |
|
||||||||| |||||||||||||| |||| |||| ||| || | || ||| |||||||||||| |||||||| |||||||| | | | | |||||| |
|
|
| T |
22656621 |
atcaactctgttaaatatccttctgcaacttcttccaaagttttccccctttcttctttcacaaaaccttcagctatccattgccgtatcactctctttg |
22656720 |
T |
|
| Q |
418 |
aataaactatatagtcttcaggatataatccaaaatacaagaaacatgactt |
469 |
Q |
| |
|
| | |||| ||| ||||| ||||||| |||||||||||| ||||||||||| |
|
|
| T |
22656721 |
attcaacttcataatcttctggatatattccaaaatacaacaaacatgactt |
22656772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 489
Target Start/End: Complemental strand, 21938172 - 21937893
Alignment:
| Q |
210 |
aaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaac |
309 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||| | | |||||||||||||||||||| | | || | |||||||| || | ||| |||||| |||| | |
|
|
| T |
21938172 |
aaatcctcatctttttcaaggatcatatcacgtattagatcatgaacacgacaacctttagctttgccatcaattctaagtgaggatacttgaaccaggc |
21938073 |
T |
|
| Q |
310 |
ttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattgactagttaa |
409 |
Q |
| |
|
||||||| ||||||||| ||| |||||| ||| | || |||| || ||| |||| ||| || |||||||| |||||||| |||||||| | | | | |
|
|
| T |
21938072 |
ttctatgtatcaactctgttagatatccctctgccacttcttccatagtctttcccttttcctccttcacaaatccttcagctatccattgtcgaatgac |
21937973 |
T |
|
| Q |
410 |
tgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcat |
489 |
Q |
| |
|
| |||||| || | | | ||||| ||||||| |||||||||||| || ||||||||||| | | |||||||||||| |
|
|
| T |
21937972 |
tctctttggtctaatttcaaaatcttctggatatactccaaaatacaacaagcatgacttgagatagtaaggcaaatcat |
21937893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 351
Target Start/End: Original strand, 22647695 - 22647772
Alignment:
| Q |
274 |
ttccatcaatacttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctt |
351 |
Q |
| |
|
|||||||||| || | |||| |||||| ||||||||||||||||||||||| ||||||||| |||| |||| |||| |
|
|
| T |
22647695 |
ttccatcaattctaactgaagatacttgaaccaaacttctatggatcaactcagttaaatatcgttctgcaacttctt |
22647772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 22634843 - 22634923
Alignment:
| Q |
85 |
atgatcgaacatgtgagttttcaataccttccattagaatacctgaactgggtgctattgataggcgtcgaatcattccag |
165 |
Q |
| |
|
||||||||| | |||| |||||||| ||||| ||||| || | ||| ||| |||||||||||| |||||||||||||||| |
|
|
| T |
22634843 |
atgatcgaatacttgagctttcaatatcttcccttagattatcagaattggatgctattgatagacgtcgaatcattccag |
22634923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 489
Target Start/End: Complemental strand, 22028851 - 22028740
Alignment:
| Q |
378 |
acaaacccttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgc |
477 |
Q |
| |
|
|||||||||||||| |||||||| | | | | | ||||||| | |||| ||| ||||| ||||||| |||||||||||| || |||| |||||| | | |
|
|
| T |
22028851 |
acaaacccttcagctatccattgtcgaatcactctctttgatttaacttcataatcttctggatatactccaaaatacaacaagcatggcttgagatagt |
22028752 |
T |
|
| Q |
478 |
aaggcaaatcat |
489 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22028751 |
aaggcaaatcat |
22028740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 489
Target Start/End: Complemental strand, 22187839 - 22187728
Alignment:
| Q |
378 |
acaaacccttcagcaatccattgactagttaatgtctttgaataaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgc |
477 |
Q |
| |
|
|||||||||||||| |||||||| | | | | | ||||||| | |||| ||| ||||| ||||||| |||||||||||| || |||| |||||| | | |
|
|
| T |
22187839 |
acaaacccttcagctatccattgtcgaatcactctctttgatttaacttcataatcttctggatatactccaaaatacaacaagcatggcttgagatagt |
22187740 |
T |
|
| Q |
478 |
aaggcaaatcat |
489 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22187739 |
aaggcaaatcat |
22187728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 201 - 400
Target Start/End: Complemental strand, 34990245 - 34990046
Alignment:
| Q |
201 |
caaaagcttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctactt |
300 |
Q |
| |
|
||||| |||||||||||| | |||| ||||||||| ||| | ||||||||||||| ||||||||| | |||||||||| || | ||| ||||| |
|
|
| T |
34990245 |
caaaaacttaaatcctcacacttttcaaggatcatcatatgtatcagatcatgaacacaacaacttctagtttttccatcaatgctaactgaggatactt |
34990146 |
T |
|
| Q |
301 |
gcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatccattg |
400 |
Q |
| |
|
|||||||||||||| | ||||||||| ||||||||| |||| |||| |||| ||| ||| | || ||| |||||||||||||||||||| |||||||| |
|
|
| T |
34990145 |
gcaccaaacttctacgaatcaactctgttaaatatctttcttcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccattg |
34990046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 397
Target Start/End: Original strand, 2304969 - 2305120
Alignment:
| Q |
246 |
agatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaacttctatggatcaactctattaaatatccttctacaa |
345 |
Q |
| |
|
||||||||||||| ||||||| | | |||||||||| || | ||| ||||||||||||||||| | | ||||||||| ||||||||||||| ||| |
|
|
| T |
2304969 |
agatcatgaacacaacaacttttagattttccatcaatgctaactgaggatacttgcaccaaacttcgacgaatcaactctgataaatatccttctgcaa |
2305068 |
T |
|
| Q |
346 |
cctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatcca |
397 |
Q |
| |
|
| |||| ||| ||| | || ||| || ||||||||||||||||| ||||| |
|
|
| T |
2305069 |
cttcttccaaagtcttcccactttcctccttcacaaacccttcagctatcca |
2305120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 397
Target Start/End: Complemental strand, 34976304 - 34976203
Alignment:
| Q |
296 |
tacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatc |
395 |
Q |
| |
|
||||||||||||||||| | | ||||||||| |||||||||||| | |||| |||| ||| ||| | || ||| || ||||||||||||||||| ||| |
|
|
| T |
34976304 |
tacttgcaccaaacttcgacgaatcaactctgttaaatatccttttgcaacttcttccaaagtcttgccactttcctccttcacaaacccttcagctatc |
34976205 |
T |
|
| Q |
396 |
ca |
397 |
Q |
| |
|
|| |
|
|
| T |
34976204 |
ca |
34976203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 397
Target Start/End: Complemental strand, 34983415 - 34983314
Alignment:
| Q |
296 |
tacttgcaccaaacttctatggatcaactctattaaatatccttctacaacctctttcaatgtccttcctgttttttctttcacaaacccttcagcaatc |
395 |
Q |
| |
|
||||||||||||||||| | | ||||||||| |||||||||||| | |||| |||| ||| ||| | || ||| || ||||||||||||||||| ||| |
|
|
| T |
34983415 |
tacttgcaccaaacttcgacgaatcaactctgttaaatatccttttgcaacttcttccaaagtcttgccactttcctccttcacaaacccttcagctatc |
34983316 |
T |
|
| Q |
396 |
ca |
397 |
Q |
| |
|
|| |
|
|
| T |
34983315 |
ca |
34983314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 120
Target Start/End: Original strand, 29604769 - 29604803
Alignment:
| Q |
86 |
tgatcgaacatgtgagttttcaataccttccatta |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
29604769 |
tgatcgaacatgtgagttttcaataccttccatta |
29604803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 872169 - 872224
Alignment:
| Q |
208 |
ttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaa |
263 |
Q |
| |
|
||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
872169 |
ttaaatcctcaaatttttcaaggatcaaatcatgtagtagatcatgaacacgacaa |
872224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 1233446 - 1233501
Alignment:
| Q |
208 |
ttaaatcctcatattttttaaggatcatttcatgcactagatcatgaacacgacaa |
263 |
Q |
| |
|
||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
1233446 |
ttaaatcctcaaatttttcaaggatcaaatcatgtagtagatcatgaacacgacaa |
1233501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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